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Pregenerated sensors for PAPPA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028370

Ensembl transcript IDs: ENSMUST00000084501.4

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCGGTTGGGTGCTAAGGATCCCTGGTGTGGAGAGGCCATTTCATTaGGCAGCAGACTGTGAAATCAATACCAGAGGGATGCGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: TGWVLRIPGVERPFH*AADCEINTRGMRVL
Trigger: CAGGACCCGCATCCCTCTGGTATTGATTTCACAGTCTGCTGCTCAATGAAATGGCCTCTCCACACCAGGGATCCTTAGCACCCAACCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 90 bp GAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTaGTTCCTTGCTGCTAACAGACATACTGCTTCAGCTGCAGAACTC +
Preference number: 1 (lower is better)
Translates to: EQFPRWGSENCPSPR*FLAANRHTASAAEL
Trigger: GAGTTCTGCAGCTGAAGCAGTATGTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp AAGGATCCCTGGTGTGGAGAGGCCATTTCATTGAGCAGCAGACTGTaGAATCAATACCAGAGGGATGCGGGTCCTGGCATTGGGAAATCT +
Preference number: 1 (lower is better)
Translates to: KDPWCGEAISLSSRL*NQYQRDAGPGIGKS
Trigger: AGATTTCCCAATGCCAGGACCCGCATCCCTCTGGTATTGATTTCACAGTCTGCTGCTCAATGAAATGGCCTCTCCACACCAGGGATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp AAAGTCTCGGCAGAGGTCCAGTGTGCTAAGGCCAAGAGCAGCAGCTaGTTCCCTCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATC +
Preference number: 1 (lower is better)
Translates to: KVSAEVQCAKAKSSS*FPPSAKACYLRLLI
Trigger: GATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGAGGGAATCAGCTGCTGCTCTTGGCCTTAGCACACTGGACCTCTGCCGAGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 90 bp AGGAAGAGTAGCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATaGGTGGAATCTGGAAGGGGTATGAAGACCTCAAGCCTCAAGCAG +
Preference number: 1 (lower is better)
Translates to: RKSSSKCGPKVRSGK*VESGRGMKTSSLKQ
Trigger: CTGCTTGAGGCTTGAGGTCTTCATACCCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGCTACTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp GTTTGTCTTCTTTCTCAGTATTCAACGGGGTCCCCTGCATGGTCATaGAGCAGCTTCTTAAGAACAGAGCTGTGCAGCGTGGTTCTGAGT +
Preference number: 1 (lower is better)
Translates to: VCLLSQYSTGSPAWS*SSFLRTELCSVVLS
Trigger: ACTCAGAACCACGCTGCACAGCTCTGTTCTTAAGAAGCTGCTTCATGACCATGCAGGGGACCCCGTTGAATACTGAGAAAGAAGACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp GTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGTATaGAGACCTCAAGCCTCAAGCAGGGAGCTGATAGAATACCTTAAT +
Preference number: 1 (lower is better)
Translates to: VPRSDLENGWNLEGV*RPQASSRELIEYLN
Trigger: ATTAAGGTATTCTATCAGCTCCCTGCTTGAGGCTTGAGGTCTTCATACCCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 90 bp TGTTTGCTTGGTTTGTCTTCTTTCTCAGTATTCAACGGGGTCCCCTaGATGGTCATGAAGCAGCTTCTTAAGAACAGAGCTGTGCAGCGT +
Preference number: 1 (lower is better)
Translates to: CLLGLSSFSVFNGVP*MVMKQLLKNRAVQR
Trigger: ACGCTGCACAGCTCTGTTCTTAAGAAGCTGCTTCATGACCATGCAGGGGACCCCGTTGAATACTGAGAAAGAAGACAAACCAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp CATCTTAGACTACAGGATAGTATTCCACTCCATCATTCAACATGGTaGGATTCAGTTCATTGCCCCACAGTTGGTCCTTCCTGGGTGAAA +
Preference number: 1 (lower is better)
Translates to: HLRLQDSIPLHHSTW*DSVHCPTVGPSWVK
Trigger: TTTCACCCAGGAAGGACCAACTGTGGGGCAATGAACTGAATCTCACCATGTTGAATGATGGAGTGGAATACTATCCTGTAGTCTAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 90 bp CCTTCATCCCCTCTACCATGGACAGTCACTAAAGAAATGAACCAATaGTTAGCTAACAATAACTCAAGGGCAAAAATGCCTTACTTCCTG +
Preference number: 1 (lower is better)
Translates to: PSSPLPWTVTKEMNQ*LANNNSRAKMPYFL
Trigger: CAGGAAGTAAGGCATTTTTGCCCTTGAGTTATTGTTAGCTAAGCATTGGTTCATTTCTTTAGTGACTGTCCATGGTAGAGGGGATGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp TGGAATATTTACCATTTAGGAAGCCCTAGTTCCCTAGAAGGTTGGTaGTTACAGCCATTTCACTTCCAGTCCCAAAGCACTACACAATAT +
Preference number: 1 (lower is better)
Translates to: WNIYHLGSPSSLEGW*LQPFHFQSQSTTQY
Trigger: ATATTGTGTAGTGCTTTGGGACTGGAAGTGAAATGGCTGTAATCACCAACCTTCTAGGGAACTAGGGCTTCCTAAATGGTAAATATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp TCTTCTCTTAATGAACCAGATTATGTGGAAACTAAGTCTGAGAAGTaGGGATTCTACTGGAGAAGAGATGCCAGACCCTCTTACTCTGTA +
Preference number: 1 (lower is better)
Translates to: SSLNEPDYVETKSEK*GFYWRRDARPSYSV
Trigger: TACAGAGTAAGAGGGTCTGGCATCTCTTCTCCAGTAGAATCCTCACTTCTCAGACTTAGTTTCCACATAATCTGGTTCATTAAGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp AGCAACTCAATAATTGTTCAAAGTTCTCCTCACTGGCTGCTGGTGTaGAGTTTAAGAAGCCCAACTTGCACTCAGAATGTTATCTCTTCT +
Preference number: 1 (lower is better)
Translates to: SNSIIVQSSPHWLLV*SLRSPTCTQNVISS
Trigger: AGAAGAGATAACATTCTGAGTGCAAGTTGGGCTTCTTAAACTTCACACCAGCAGCCAGTGAGGAGAACTTTGAACAATTATTGAGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 90 bp ATTAATGCCTTAGATGCAGTGTGGCTTACACATGGGCTGGCATTTTaGATTCTGTTCCAGACTTTGTTTTATTGGTTGGTTATCTCCACT +
Preference number: 1 (lower is better)
Translates to: INALDAVWLTHGLAF*ILFQTLFYWLVIST
Trigger: AGTGGAGATAACCAACCAATAAAACAAAGTCTGGAACAGAATGCAAAATGCCAGCCCATGTGTAAGCCACACTGCATCTAAGGCATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 90 bp TGGGATAAGGACAATAACTTAAGTCCTTGCTATTCCAACAGTCTCTaGGTAGCTCCAGCATTTCCAAGTTTAACACTGTTCCACTTGATT +
Preference number: 1 (lower is better)
Translates to: WDKDNNLSPCYSNSL*VAPAFPSLTLFHLI
Trigger: AATCAAGTGGAACAGTGTTAAACTTGGAAATGCTGGAGCTACCCAGAGACTGTTGGAATAGCAAGGACTTAAGTTATTGTCCTTATCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp ATTACAGCCATTTCACTTCCAGTCCCAAAGCACTACACAATATTCTaGGCCTTAGAATCTGAGATGTATTGGCTTTTCAGTACTTGGTCT +
Preference number: 1 (lower is better)
Translates to: ITAISLPVPKHYTIF*ALESEMYWLFSTWS
Trigger: AGACCAAGTACTGAAAAGCCAATACATCTCAGATTCTAAGGCTCAGAATATTGTGTAGTGCTTTGGGACTGGAAGTGAAATGGCTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 90 bp ATGGGCTGGCATTTTGCATTCTGTTCCAGACTTTGTTTTATTGGTTaGTTATCTCCACTAGACTTGCGATCAGTTGATGTACTATTCATC +
Preference number: 1 (lower is better)
Translates to: MGWHFAFCSRLCFIG*LSPLDLRSVDVLFI
Trigger: GATGAATAGTACATCAACTGATCGCAAGTCTAGTGGAGATAACCAACCAATAAAACAAAGTCTGGAACAGAATGCAAAATGCCAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 90 bp CATTTAAAGACTAAATATGGGAGGGGAAGGAGTGATGTCCAACAATaGATGTGGAAAGATGTCCTAACATCTGAAAGATTATGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: HLKTKYGRGRSDVQQ*MWKDVLTSERLCGK
Trigger: TTTTCCACATAATCTTTCAGATGTTAGGACATCTTTCCACATTCATTGTTGGACATCACTCCTTCCCCTCCCATATTTAGTCTTTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp TGCCCCACAGTTGGTCCTTCCTGGGTGAAATTAAAGGCAGACCGGTaGGGTGCTAAGGATCCCTGGTGTGGAGAGGCCATTTCATTGAGC +
Preference number: 2 (lower is better)
Translates to: CPTVGPSWVKLKADR*GAKDPWCGEAISLS
Trigger: GCTCAATGAAATGGCCTCTCCACACCAGGGATCCTTAGCACCCAACCGGTCTGCCTTTAATTTCACCCAGGAAGGACCAACTGTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp TCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTaGCTGCTAACAGACATACTGCTTCAGCTGCAGAACTCCCAAGTA +
Preference number: 2 (lower is better)
Translates to: SPDGAQRTVHLLVAS*LLTDILLQLQNSQV
Trigger: TACTTGGGAGTTCTGCAGCTGAAGCAGTATGTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCAGAGAGGCCATTTCATTaGGCAGCAGACTGTGAAATC +
Preference number: 2 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPERPFH*AADCEI
Trigger: GATTTCACAGTCTGCTGCTCAATGAAATGGCCTCTC...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCAATCGACAACAGGGTTTaGATGAGGAATGACTGGGAG +
Preference number: 2 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPIDNRV*MRNDWE
Trigger: CTCCCAGTCATTCCTCATCCAAACCCTGTTGTCGAT...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCATGGGCTGGCATTTTaGATTCTGTTCCAGACTTTG +
Preference number: 2 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFHGLAF*ILFQTL
Trigger: CAAAGTCTGGAACAGAATGCAAAATGCCAGCCCATG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp CCTCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTaGCTTTACACCCCACCTCACCTACCCACACTGACTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: PPSAKACYLRLLISP*LYTPPHLPTLTSQG
Trigger: TCCTTGGGAAGTCAGTGTGGGTAGGTGAGGTGGGGTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGCCTTAGATGCAGTGTaGCTTACACATGGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDALDAV*LTHGLA
Trigger: TGCCAGCCCATGTGTAAGCCACACTGCATCTAAGGC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACAATCTGGAAGGGGTATaGAGACCTCAAGCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDNLEGV*RPQASS
Trigger: GCTTGAGGCTTGAGGTCTTCATACCCCTTCCAGATT...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCAATCCCAGGGGGAAATaGACTATGAGATATGCTTTT +
Preference number: 2 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFNPRGK*TMRYAF
Trigger: AAAAGCATATCTCATAGTGCATTTCCCCCTGGGATT...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACTCATTGCCCCACAGTTaGTCCTTCCTGGGTGAAATT +
Preference number: 2 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDSLPHS*SFLGEI
Trigger: AATTTCACCCAGGAAGGACCAACTGTGGGGCAATGA...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACCATCATTCAACATGGTaGGATTCAGTTCATTGCCCC +
Preference number: 2 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDHHSTW*DSVHCP
Trigger: GGGGCAATGAACTGAATCTCACCATGTTGAATGATG...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTACCTTCTGCAAAGGCCTaGTATTTAAGACTGTTAATC +
Preference number: 2 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLPSAKA*YLRLLI
Trigger: GATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGG...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACTTGGAGGAACCAAAGTaGTTGACCATTGTGTTAGTG +
Preference number: 2 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDLEEPK*LTIVLV
Trigger: CACTAACACAATGGTCAAGCACTTTGGTTCCTCCAA...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGGTGCTAAGGATCCCTaGTGTGGAGAGGCCATTTCA +
Preference number: 2 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENGAKDP*CGEAIS
Trigger: TGAAATGGCCTCTCCACACCAGGGATCCTTAGCACC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACGGCTTACACATGGGCTaGCATTTTGCATTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHGLHMG*HFAFCS
Trigger: GGAACAGAATGCAAAATGCCAGCCCATGTGTAAGCC...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTCTGGATTACTTATCTaGAAGGATGGCCCTGTCACC +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHSGLLI*KDGPVT
Trigger: GGTGACAGGGCCATCCTTCCAGATAAGTAATCCAGA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp CCTTATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATaGGGTAGCCTCTTTTATCTATTAGGCTCAGCAAATATGAATTTG +
Preference number: 2 (lower is better)
Translates to: PYELHIPCGHEAGYQ*GSLFYLLGSANMNL
Trigger: CAAATTCATATTTGCTGAGCCTAATAGATAAAAGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACTGGGAGGGGAAGGAGTaGTGTCCAACAATGAATGTG +
Preference number: 2 (lower is better)
Translates to: NRAYILRFSPCISVPCNHWEGKE*CPTMNV
Trigger: CACATTCATTGTTGGACATCACTCCTTCCCCTCCCA...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTCCAAAACAGATGACTaGGGAGATGAGACAAGGAGT +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHSKTDD*GDETRS
Trigger: ACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGGA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATATGGGTGTGCATGCATaGCTGTGTACTAACCACAGA +
Preference number: 2 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYMGVHA*LCTNHR
Trigger: TCTGTGGTTAGTACACAGGCATGCATGCACACCCAT...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTTTCCAGTTGTTTTCTaGCCTCACACAGACATTGGC +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHFPVVF*PHTDIG
Trigger: GCCAATGTCTGTGTGAGGGCAGAAAACAACTGGAAA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGACACAGACATTGGCATaGGTGTGCATGCATGCCTGT +
Preference number: 2 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRTQTLA*VCMHAC
Trigger: ACAGGCATGCATGCACACCCATGCCAATGTCTGTGT...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGAGCTTTGCACACCTTaGAATATTTACCATTTAGGA +
Preference number: 2 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDELCTP*NIYHLG
Trigger: TCCTAAATGGTAAATATTCCAAGGTGTGCAAAGCTC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTAACTGTGGGAAAATATaGATCACTTTTGAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLNCGKI*ITFEAV
Trigger: GACTGCCTCAAAAGTGATTCATATTTTCCCACAGTT...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGGGGGAAATGCACTATaGGATATGCTTTTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENGGNAL*DMLLEE
Trigger: TTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTGCGGGTCCTGGCATTaGGAAATCTTTGACACCTGT +
Preference number: 2 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYCGSWH*EIFDTC
Trigger: ACAGGTGTCAAAGATTTCCCAATGCCAGGACCCGCA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTTCCCAAGGTCAGATCTaGAAAATGGGTGGAATCTGG +
Preference number: 2 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVSQGQI*KMGGIW
Trigger: CCAGATTCCACCCATTTTCCAGATCTGACCTTGGGA...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACCTTTGTTTTATTGGTTaGTTATCTCCACTAGACTTG +
Preference number: 2 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDLCFIG*LSPLDL
Trigger: CAAGTCTAGTGGAGATAACCAACCAATAAAACAAAG...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGAGAAGAAAACTGGATaGGACTCTTCCTGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENEKKTG*DSSWKA
Trigger: AGCTTTCCAGGAAGAGTCCCATCCAGTTTTCTTCTC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp AGTCTCTGGGTAGCTCCAGCATTTCCAAGTTTAACACTGTTCCACTaGATTAGAAAATCCAACACTGGATTAGATATTCTGGACTTTCCA +
Preference number: 2 (lower is better)
Translates to: SLWVAPAFPSLTLFH*IRKSNTGLDILDFP
Trigger: TGGAAAGTCCAGAATATCTAATCCAGTGTTGGATTTTCTAATCAAGTGGAACAGTGTTAAACTTGGAAATGCTGGAGCTACCCAGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp CAATTGGGTAGCCTCTTTTATCTATTAGGCTCAGCAAATATGAATTaGTTCATAACAGGCTTGAATGGCGGTGAGAAGAAAACTGGATGG +
Preference number: 2 (lower is better)
Translates to: QLGSLFYLLGSANMN*FITGLNGGEKKTGW
Trigger: CCATCCAGTTTTCTTCTCACCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAAAAGAGGCTACCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATTGGATGAGGAATGACTaGGAGAAATTCTTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENWMRND*EKFLWS
Trigger: AGACCACAAGAATTTCTCCCAGTCATTCCTCATCCA...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp TGGTCTTTCTTAGTTTCTACAACTCTTCTATTGATAATGTCATCTTaGGGTCTTTGGAGGTTTCTGGATTACTTATCTGGAAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: WSFLVSTTLLLIMSS*GLWRFLDYLSGRMA
Trigger: GGCCATCCTTCCAGATAAGTAATCCAGAAACCTCCAAAGACCCAAAGATGACATTATCAATAGAAGAGTTGTAGAAACTAAGAAAGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 90 bp GACATCGACAACAGGGTTTGGATGAGGAATGACTGGGAGAAATTCTaGTGGTCTTTCTTAGTTTCTACAACTCTTCTATTGATAATGTCA +
Preference number: 2 (lower is better)
Translates to: DIDNRVWMRNDWEKF*WSFLVSTTLLLIMS
Trigger: TGACATTATCAATAGAAGAGTTGTAGAAACTAAGAAAGACCACAAGAATTTCTCCCAGTCATTCCTCATCCAAACCCTGTTGTCGATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATCACTACACAATATTCTaGGCCTTAGAATCTGAGATG +
Preference number: 2 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYHYTIF*ALESEM
Trigger: CATCTCAGATTCTAAGGCTCAGAATATTGTGTAGTG...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATAGTGATGTCCAACAATaGATGTGGAAAGATGTCCTA +
Preference number: 2 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYSDVQQ*MWKDVL
Trigger: TAGGACATCTTTCCACATTCATTGTTGGACATCACT...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACATATCATTGCTTCCCTaGCCCACCTTTCATAAATTA +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHISLLP*PTFHKL
Trigger: TAATTTATGAAAGGTGGGGCAGGGAAGCAATGATAT...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACACATACTGCTTCAGCTaGAGAACTCCCAAGTACTTT +
Preference number: 2 (lower is better)
Translates to: NRAYILRFSPCISVPCNHTYCFS*RTPKYF
Trigger: AAAGTACTTGGGAGTTCTGCAGCTGAAGCAGTATGT...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTAGAAGTGAGGAACTGTaGGAAAATATGAATCACTTT +
Preference number: 2 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLRSEEL*ENMNHF
Trigger: AAAGTGATTCATATTTTCCCACAGTTCCTCACTTCT...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACACAACTCTATCTGCTTaGAGTAATAGTGGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYTTLSA*SNSGSL
Trigger: GAGACTCCCACTATTACTCCAAGCAGATAGAGTTGT...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTGGGAGAAATTCTTGTaGTCTTTCTTAGTTTCTACA +
Preference number: 2 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHWEKFL*SFLVST
Trigger: TGTAGAAACTAAGAAAGACCACAAGAATTTCTCCCA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR TCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTGGGAATCAGTGCATTaGAAAAATACAGCTGACTGT +
Preference number: 2 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYWESVH*KNTADC
Trigger: ACAGTCAGCTGTATTTTTTCAATGCACTGATTCCCA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR GCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTAAAATTGGGGAGCTTTaGACACCTTGGAATATTTAC +
Preference number: 2 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVKIGEL*TPWNIY
Trigger: GTAAATATTCCAAGGTGTGCAAAGCTCCCCAATTTT...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTGAATCTGAGATGTATTaGCTTTTCAGTACTTGGTCT +
Preference number: 2 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVESEMY*LFSTWS
Trigger: AGACCAAGTACTGAAAAGCCAATACATCTCAGATTC...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGTCATCTTTGGGTCTTTaGAGGTTTCTGGATTACTTA +
Preference number: 2 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRSSLGL*RFLDYL
Trigger: TAAGTAATCCAGAAACCTCCAAAGACCCAAAGATGA...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGCAGACTTTGTTTTATTaGTTGGTTATCTCCACTAGA +
Preference number: 2 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRQTLFY*LVISTR
Trigger: TCTAGTGGAGATAACCAACCAATAAAACAAAGTCTG...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTGTTCTTTTGGGCTATaGTCATTTGAGAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYCSFGL*SFEKWK
Trigger: TTTCCATTTCTCAAATGACCATAGCCCAAAAGAACA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp AATGCAAGTCCTCCGGGCAGACAGTGTGTTGCGGTTTaGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTC +
Preference number: 3 (lower is better)
Translates to: NASPPGRQCVAV*NSSPDGAQRTV
Trigger: GACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGTCTGCCCGGAGGACTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp CCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTaGTTCCTTGCTGCTAACAGACATACTGCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: PRWGSENCPSPR*FLAANRHTASA
Trigger: AGCTGAAGCAGTATGTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCACCTGTCACCACTCTTTaGCTTGTCCCTTCTAAGCTG +
Preference number: 3 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPPVTTL*LVPSKL
Trigger: CAGCTTAGAAGGGACAAGCAAAAGAGTGGTGACAGG...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACAAGGCCCTGCATATATaGCTGGCTTCCATGTACAGT +
Preference number: 3 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDKALHI*LASMYS
Trigger: ACTGTACATGGAAGCCAGCAATATATGCAGGGCCTT...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACGAGGCAGGCTACCAATaGGGTAGCCTCTTTTATCTA +
Preference number: 3 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDEAGYQ*GSLFYL
Trigger: TAGATAAAAGAGGCTACCCAATTGGTAGCCTGCCTC...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp CTTTCTCAGTATTCAACGGGGTCCCCTGCATGGTCATaGAGCAGCTTCTTAAGAACAGAGCTGTGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: LSQYSTGSPAWS*SSFLRTELCSV
Trigger: CACGCTGCACAGCTCTGTTCTTAAGAAGCTGCTTCATGACCATGCAGGGGACCCCGTTGAATACTGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp GCAGAACTCCCAAGTACTTTAGAGCCCCTTAAGCTGTaGATGTACAATAGTGCTTCAGACCCGCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: AELPSTLEPLKL*MYNSASDPPPP
Trigger: AGGAGGAGGCGGGTCTGAAGCACTATTGTACATCCACAGCTTAAGGGGCTCTAAAGTACTTGGGAGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp GTGCTAAGGATCCCTGGTGTGGAGAGGCCATTTCATTaGGCAGCAGACTGTGAAATCAATACCAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: VLRIPGVERPFH*AADCEINTRGM
Trigger: CATCCCTCTGGTATTGATTTCACAGTCTGCTGCTCAATGAAATGGCCTCTCCACACCAGGGATCCTTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp AGCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATaGGTGGAATCTGGAAGGGGTATGAAGACCTCAAGC +
Preference number: 3 (lower is better)
Translates to: SSKCGPKVRSGK*VESGRGMKTSS
Trigger: GCTTGAGGTCTTCATACCCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp ACCTTTGCCTCAGGCTGTGTAGTGTCTTCTACAGATTaGACAGTCCGTTTAGTATCCTCAGGGCCTCATGAC +
Preference number: 3 (lower is better)
Translates to: TFASGCVVSSTD*TVRLVSSGPHD
Trigger: GTCATGAGGCCCTGAGGATACTAAACGGACTGTCCAATCTGTAGAAGACACTACACAGCCTGAGGCAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCAAAGACAGTGTTCCTaGGGAGCTTGGAAAATGAAA +
Preference number: 3 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFQRQCS*GAWKMK
Trigger: TTTCATTTTCCAAGCTCCCAAGGAACACTGTCTTTG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp TCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGTATaGAGACCTCAAGCCTCAAGCAGGGAGCTGATAGAA +
Preference number: 3 (lower is better)
Translates to: SDLENGWNLEGV*RPQASSRELIE
Trigger: TTCTATCAGCTCCCTGCTTGAGGCTTGAGGTCTTCATACCCCTTCCAGATTCCACCCATTTTCCAGATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp GCCCTGTCACCACTCTTTTGCTTGTCCCTTCTAAGCTaGCACAGCACATCAGAGCAAAAGAGGAATCTGAAG +
Preference number: 3 (lower is better)
Translates to: ALSPLFCLSLLS*HSTSEQKRNLK
Trigger: CTTCAGATTCCTCTTTTGCTCTGATGTGCTGTGTCAGCTTAGAAGGGACAAGCAAAAGAGTGGTGACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp ATTGAGCAGCAGACTGTGAAATCAATACCAGAGGGATaGGGGTCCTGGCATTGGGAAATCTTTGACACCTGT +
Preference number: 3 (lower is better)
Translates to: IEQQTVKSIPEG*GSWHWEIFDTC
Trigger: ACAGGTGTCAAAGATTTCCCAATGCCAGGACCCGCATCCCTCTGGTATTGATTTCACAGTCTGCTGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCTTATCTCCACTAGACTaGCGATCAGTTGATGTACTA +
Preference number: 3 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFLSPLD*RSVDVL
Trigger: TAGTACATCAACTGATCGCAAGTCTAGTGGAGATAA...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAAGATGTGCATACTCCTaGATACACACACCGTTTTGT +
Preference number: 3 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLRCAYS*IHTPFC
Trigger: ACAAAACGGTGTGTGTATCAAGGAGTATGCACATCT...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACACATGGGCTGGCATTTaGCATTCTGTTCCAGACTTT +
Preference number: 3 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDTWAGI*HSVPDF
Trigger: AAAGTCTGGAACAGAATGCAAAATGCCAGCCCATGT...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACAATATGAAAACACAGTaGGCTAAGTTACTGTTGGTC +
Preference number: 3 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDNMKTQ*AKLLLV
Trigger: GACCAACAGTAACTTAGCCAACTGTGTTTTCATATT...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp ATTAAGGTGGATTGTAACCCAGGCCTTCCAGCTTTGTaGCATGAAATGTTGATCAAGCACTCCCTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: IKVDCNPGLPAL*HEMLIKHSLSL
Trigger: CAGAGACAGGGAGTGCTTGATCAACATTTCATGGCACAAAGCTGGAAGGCCTGGGTTACAATCCACCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATTTAAAGGCAGACCGGTaGGGTGCTAAGGATCCCTGG +
Preference number: 3 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYLKADR*GAKDPW
Trigger: CCAGGGATCCTTAGCACCCAACCGGTCTGCCTTTAA...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTATTTCCAGCTCAACCTaGCACCCTGGTGTTGGAACA +
Preference number: 3 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLISSST*HPGVGT
Trigger: TGTTCCAACACCAGGGTGCAAGGTTGAGCTGGAAAT...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp TACCATTTAGGAAGCCCTAGTTCCCTAGAAGGTTGGTaGTTACAGCCATTTCACTTCCAGTCCCAAAGCACT +
Preference number: 3 (lower is better)
Translates to: YHLGSPSSLEGW*LQPFHFQSQST
Trigger: AGTGCTTTGGGACTGGAAGTGAAATGGCTGTAATCACCAACCTTCTAGGGAACTAGGGCTTCCTAAATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp AGATTGGTCCAAGAAATCCCAGGGGGAAATGCACTATaGGATATGCTTTTGGAGGAACCAAAGTGCTTGACC +
Preference number: 3 (lower is better)
Translates to: RLVQEIPGGNAL*DMLLEEPKCLT
Trigger: GGTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGGATTTCTTGGACCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp GAGCAGATGACAGTGACATCGACAACAGGGTTTGGATaGGGAATGACTGGGAGAAATTCTTGTGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: EQMTVTSTTGFG*GMTGRNSCGLS
Trigger: AGAAAGACCACAAGAATTTCTCCCAGTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp ATCTTTGGGTCTTTGGAGGTTTCTGGATTACTTATCTaGAAGGATGGCCCTGTCACCACTCTTTTGCTTGTC +
Preference number: 3 (lower is better)
Translates to: IFGSLEVSGLLI*KDGPVTTLLLV
Trigger: GACAAGCAAAAGAGTGGTGACAGGGCCATCCTTCCAGATAAGTAATCCAGAAACCTCCAAAGACCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGTGTTCCTTGGGAGCTaGGAAAATGAAAGATTGAAT +
Preference number: 3 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDVFLGS*ENERLN
Trigger: ATTCAATCTTTCATTTTCCAAGCTCCCAAGGAACAC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACAAAAATTGGGGAGCTTaGCACACCTTGGAATATTTA +
Preference number: 3 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDKNWGA*HTLEYL
Trigger: TAAATATTCCAAGGTGTGCAAAGCTCCCCAATTTTT...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp AGAGCAAAAGAGGAATCTGAAGGCTTGACAAAAGTTTaGGGATCTTGGAGAGATGATCATAATTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: RAKEESEGLTKV*GSWRDDHNWAS
Trigger: GCTGGCCCAATTATGATCATCTCTCCAAGATCCTCAAACTTTTGTCAAGCCTTCAGATTCCTCTTTTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp CTCCTCCTGATTATCCCATTGTCCAAAACAGATGACTaGGGAGATGAGACAAGGAGTTTATTCTCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: LLLIIPLSKTDD*GDETRSLFSGR
Trigger: TCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGGACAATGGGATAATCAGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp AATGAACCAGATTATGTGGAAACTAAGTCTGAGAAGTaGGGATTCTACTGGAGAAGAGATGCCAGACCCTCT +
Preference number: 3 (lower is better)
Translates to: NEPDYVETKSEK*GFYWRRDARPS
Trigger: AGAGGGTCTGGCATCTCTTCTCCAGTAGAATCCTCACTTCTCAGACTTAGTTTCCACATAATCTGGTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp AAATATGAATTTGTTCATAACAGGCTTGAATGGCGGTaGGAAGAAAACTGGATGGGACTCTTCCTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: KYEFVHNRLEWR*EENWMGLFLES
Trigger: GCTTTCCAGGAAGAGTCCCATCCAGTTTTCTTCTCACCGCCATTCAAGCCTGTTATGAACAAATTCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp TTAGATGCAGTGTGGCTTACACATGGGCTGGCATTTTaGATTCTGTTCCAGACTTTGTTTTATTGGTTGGTT +
Preference number: 3 (lower is better)
Translates to: LDAVWLTHGLAF*ILFQTLFYWLV
Trigger: AACCAACCAATAAAACAAAGTCTGGAACAGAATGCAAAATGCCAGCCCATGTGTAAGCCACACTGCATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp TTGATAAAGATTGGTCCAAGAAATCCCAGGGGGAAATaGACTATGAGATATGCTTTTGGAGGAACCAAAGTG +
Preference number: 3 (lower is better)
Translates to: LIKIGPRNPRGK*TMRYAFGGTKV
Trigger: CACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGGATTTCTTGGACCAATCTTTATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp AGAAAGAAAGAAAGAAAGAAAGAACCCTATGACCTTTaGCTCAGGCTGTGTAGTGTCTTCTACAGATTGGAC +
Preference number: 3 (lower is better)
Translates to: RKKERKKEPYDL*LRLCSVFYRLD
Trigger: GTCCAATCTGTAGAAGACACTACACAGCCTGAGGCAAAGGTCATAGGGTTCTTTCTTTCTTTCTTTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACAGGGCACTCAATGTATaGGACAGAGCAGCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYRALNV*DRAAGR
Trigger: TCTTCCTGCTGCTCTGTCCAATACATTGAGTGCCCT...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp ATAGATGGGCAAGAAGTGAGGAACTGTGGGAAAATATaGATCACTTTTGAGGCAGTCTACTTGGTTATATGG +
Preference number: 3 (lower is better)
Translates to: IDGQEVRNCGKI*ITFEAVYLVIW
Trigger: CCATATAACCAAGTAGACTGCCTCAAAAGTGATTCATATTTTCCCACAGTTCCTCACTTCTTGCCCATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR GCA 72 bp CCTCTACCATGGACAGTCACTAAAGAAATGAACCAATaGTTAGCTAACAATAACTCAAGGGCAAAAATGCCT +
Preference number: 3 (lower is better)
Translates to: PLPWTVTKEMNQ*LANNNSRAKMP
Trigger: AGGCATTTTTGCCCTTGAGTTATTGTTAGCTAAGCATTGGTTCATTTCTTTAGTGACTGTCCATGGTAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATAATATGATGACTATGTaGGGTACTCAGTCTGGATCT +
Preference number: 3 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYNMMTM*GTQSGS
Trigger: AGATCCAGACTGAGTACCCAACATAGTCATCATATT...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp ATTTCACTTCCAGTCCCAAAGCACTACACAATATTCTaGGCCTTAGAATCTGAGATGTATTGGCTTTTCAGT +
Preference number: 3 (lower is better)
Translates to: ISLPVPKHYTIF*ALESEMYWLFS
Trigger: ACTGAAAAGCCAATACATCTCAGATTCTAAGGCTCAGAATATTGTGTAGTGCTTTGGGACTGGAAGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CCA 72 bp CTAACAATAACTCAAGGGCAAAAATGCCTTACTTCCTaGACCTACCACAATGTTCAGCAAATGTTAGTCAAT +
Preference number: 3 (lower is better)
Translates to: LTITQGQKCLTS*TYHNVQQMLVN
Trigger: ATTGACTAACATTTGCTGAACATTGTGGTAGGTCCAGGAAGTAAGGCATTTTTGCCCTTGAGTTATTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGGAGCTTTGCACACCTaGGAATATTTACCATTTAGG +
Preference number: 3 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYGALHT*EYLPFR
Trigger: CCTAAATGGTAAATATTCCAAGGTGTGCAAAGCTCC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp AGAAGTGAGGAACTGTGGGAAAATATGAATCACTTTTaGGGCAGTCTACTTGGTTATATGGAGTTTGTTGTA +
Preference number: 3 (lower is better)
Translates to: RSEELWENMNHF*GSLLGYMEFVV
Trigger: TACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTCATATTTTCCCACAGTTCCTCACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR TCA 72 bp TCTGGAGCTTTGTGCCACCTACATCAACTTCTATCTTaGCCATTATTACATTGTTTTTACAGAGGAAATGAT +
Preference number: 3 (lower is better)
Translates to: SGALCHLHQLLS*PLLHCFYRGND
Trigger: ATCATTTCCTCTGTAAAAACAATGTAATAATGGTCAAGATAGAAGTTGATGTAGGTGGCACAAAGCTCCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCCACCTGGGGGCTGTTaGCATCCTTCATGGGGGACC +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFPPGGC*HPSWGT
Trigger: GGTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCAAGCCGTGGGCATTGCTaGATTCCACCTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPSRGHC*IPPGGC
Trigger: ACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCT...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACCGACCAGGGGCGAACTaGAGCTCACATGTACCGCCT +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDRPGAN*SSHVPP
Trigger: AGGCGGTACATGTGAGCTTCAGTTCGCCCCTGGTCG...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGTGGGGCGAGGCACATaGGCTCACACAAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLVGRGT*AHTRPL
Trigger: CAGAGGCCTTGTGTGAGCTCATGTGCCTCGCCCCAC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCAGAGTTGGTTTGGGGCTaGGCACTGGCCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPELVWG*ALALHL
Trigger: GAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTC...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACATGTACCCACTGACCTaGGAGGTAGCTGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDMYPLT*EVAAMG
Trigger: GCCCATCGCAGCTACCTCCCAGGTCAGTGGGTACAT...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATTGCTCCCACGGCCCTaGGAGGCATCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPLLPRP*EASLSS
Trigger: TGAAGACAGTGATGCCTCCCAGGGCCGTGGGAGCAA...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATGGTGTGAATGCCCATaGCCCATCCTCGATCACGTG +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPWCECP*PILDHV
Trigger: CACGTGATCGAGGATGGGTCATGGGCATTCACACCA...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCTCTGCTGCTTCTTCATaGACGCAGGGTAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFSAASS*TQGSAA
Trigger: AGCTGCGCTACCCTGCGTTCATGAAGAAGCAGCAGA...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCTTGGACTTCCGAGATaGGCCAGGCACGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGLGLPR*ARHVVS
Trigger: GGATACCACGTGCCTGGCTCATCTCGGAAGTCCAAG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCATCTGGGTGACCTTCTaGTTCCCGAGGACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFIWVTF*FPRTPV
Trigger: CACTGGAGTCCTCGGGAAGCAGAAGGTCACCCAGAT...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCAGGTCCAGGCACGAGATaGCACACTCTGACCCTATTG +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPGPGTR*HTLTLL
Trigger: CAATAGGGTCAGAGTGTGCCATCTCGTGCCTGGACC...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACGTGTGGGTTGACAGCTaGATTTGGACTCCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDVWVDS*IWTPGS
Trigger: CGAACCTGGAGTCCAAATTCAGCTGTCAACCCACAC...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTCAGCCCTGTGATCACTaGTGGAGACTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASQPCDH*WRLLAT
Trigger: GGTGGCCAGAAGTCTCCAGCAGTGATCACAGGGCTG...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATTGCTGAATTCCACCTaGGGGCTGTTGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPLLNST*GLLPSF
Trigger: GAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAA...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCAGAAGTGGCCATCGATaGGTGGGAACCACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFRSGHR*VGTTLA
Trigger: TGCTAGAGTGGTTCCCACCCATCGATGGCCACTTCT...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCCCATGGAATTTGGGTaGAGGTGGGTCACAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFPMEFG*RWVTSH
Trigger: GTGACTTGTGACCCACCTCCACCCAAATTCCATGGG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp GGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTaGCTGCTAACAGACATACTGCTTCAGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GAQRTVHLLVAS*LLTDILLQLQN
Trigger: GTTCTGCAGCTGAAGCAGTATGTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGTCTGGGTCAGTGGGCTaGATATGCCACCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGSGSVG*ICHLLA
Trigger: AGCAAGTAGGTGGCATATTCAGCCCACTGACCCAGA...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGTGTTCAACATCTGGGTaGCCTTCTGCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGCSTSG*PSASRG
Trigger: TCCTCGGGAAGCAGAAGGTCACCCAGATGTTGAACA...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCGCAGGGTGGCGACACTaGAAAGAACATCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFAGWRH*KEHLLP
Trigger: TGGTAGAAGATGTTCTTTTCAGTGTCGCCACCCTGC...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTTCATGGGGGACCAAGTaGGCTTCACGTTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASSWGTK*ASRCPS
Trigger: ACTGGGACAACGTGAAGCGCACTTGGTCCCCCATGA...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCCATGCAGGGATCACTaGAGGACTGGATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFPCRDH*RTGFLR
Trigger: TCTCAGAAATCCAGTCCTGCAGTGATCCCTGCATGG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGAAGGCTCTGTCTCCATaGAGGGATCACTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGKALSP*RDHCRT
Trigger: AGTCCTGCAGTGATCCCTGCATGGAGACAGAGCCTT...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAAAGGAGCCCACCTTGTaGTTGTTCTCTCGACACCGG +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLKEPTL*LFSRHR
Trigger: CCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTT...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACCTTGTGTTTGGGGGCTaGGTTGGTATCATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDLVFGG*VGIIAE
Trigger: CTCTGCAATGATACCAACCCAGCCCCCAAACACAAG...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ACAGTGTGTTGCGGTTTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCACAAAGGTTACCCAGATaGTCAGAGACTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: TVCCGLEQFPRWGSENCPQRLPR*SETQGP
Trigger: TGGTCCCTGAGTCTCTGACCATCTGGGTAACCTTTG...TGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAAACCGCAACACACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACATTGGGAACTGGGGGTaGGGCGAGGCACATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDIGNWG*GEAHEL
Trigger: GAGCTCATGTGCCTCGCCCCACCCCCAGTTCCCAAT...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTCAGCCTTTGACACAGTaGATCAGAGCAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASQPLTQ*IRAGWG
Trigger: TCCCCACCCTGCTCTGATCCACTGTGTCAAAGGCTG...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTTGGGGGAGGAGGCATTaGAAGCATATTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASWGRRH*KHIAPG
Trigger: TCCTGGTGCAATATGCTTTCAATGCCTCCTCCCCCA...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTATGGCTCACAGCCTTTaGCACAGTGGATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASMAHSL*HSGSEQ
Trigger: CTGCTCTGATCCACTGTGTCAAAGGCTGTGAGCCAT...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGCCCGGAGGCGCAGCTaGTCCCCTCGCCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRARRRS*SPRPLK
Trigger: TTTCAGCGGGCGAGGGGAGCAGCTGCGCCTCCGGGC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGAGCGTGGATCTCTGTTaGCTTGATCACTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGSVDLC*LDHWWC
Trigger: ACACCACCAGTGATCAAGGCAACAGAGATCCACGCT...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGGGTGTGTCCGGGAATaGCATAGAAAGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGGCVRE*HRKMGS
Trigger: TGAACCCATCTTTCTATGGCATTCCCGGACACACCC...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTGTCCACCGGCTCACATaGCACCTGCTTGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASVHRLT*HLLVPF
Trigger: AAATGGAACAAGCAGGTGGCATGTGAGCCGGTGGAC...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTTGTTGCCATCCTTCATaGGGGACCAAGTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASCCHPS*GTKCAS
Trigger: TGAAGCGCACTTGGTCCCCCATGAAGGATGGCAACA...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTATCCAACAGGAAGCCGTaGGCATTGCTGAATTCCACC +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLSNRKP*ALLNST
Trigger: GGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGA...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGGGCTGCCGAAAACTTaGGAGCTGATTGTAACTGGA +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGGLPKT*ELIVTG
Trigger: TCCAGTTACAATCAGCTCCCAAGTTTTCGGCAGCCC...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCTCCAGGTTCGGACACTaGATTTACAGGGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFSRFGH*IYRAVQ
Trigger: TTGAACAGCCCTGTAAATCCAGTGTCCGAACCTGGA...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGTCTGGAGCCAGAATGTaGTCTGAGGCAGATGGTAGT +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGSGARM*SEADGS
Trigger: ACTACCATCTGCCTCAGACCACATTCTGGCTCCAGA...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTCATCCCCAATCTTGCTaGTGTCACAGTTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASHPQSC*CHSWLG
Trigger: TCCTAGCCAACTGTGACATCAGCAAGATTGGGGATG...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCTATGCCCAATCTCATaGATCATGGTGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGLCPIS*IMVWVC
Trigger: ACACACCCACACCATGATTCATGAGATTGGGCATAG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACTGTTGTAAGGAGTGTTaGAGAAGCCATGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDCCKEC*RSHESH
Trigger: GTGGCTTTCATGGCTTCTTCAACACTCCTTACAACA...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTAGCAGCCATCCCCATTaGCCTTATTCATGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASSSHPH*PYSCRH
Trigger: GTGACGACATGAATAAGGTCAATGGGGATGGCTGCT...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTTTGGTTCGACACACCTaGGATGCCGCTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLLVRHT*DAAGCP
Trigger: TGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCAA...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGGCAGCTGCTCAGGGTaGCGGGGTCAAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLGSCSG*RGQSCR
Trigger: TCGACAACTTTGACCCCGTCACCCTGAGCAGCTGCC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACCTTTCCGGCAGTGAATaGTATTGCTCCCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDLSGSE*YCSHGP
Trigger: AGGGCCGTGGGAGCAATATCATTCACTGCCGGAAAG...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACTGCGATGGGCATCAATaGTGGTCACTTTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDCDGHQ*WSLSWP
Trigger: GGGCCAGGAAAGTGACCACCATTGATGCCCATCGCA...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCACAAAACTTGTGTTTaGGGGCTGGGTTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFHKTCV*GLGWYH
Trigger: ATGATACCAACCCAGCCCCCAAACACAAGTTTTGTG...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCGATTGTAACTGGAGATaGCTTCTGTGTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFDCNWR*LLCCHT
Trigger: TGTGTGACAACACAGAAGTCATCTCCAGTTACAATC...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCAATCTCCACCATCATaGCCAGTCAGTGTATGGTTA +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGQSPPS*PVSVWL
Trigger: TAACCATACACTGACTGGTCATGATGGTGGAGATTG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTAGACTTGATTGGGCGTaGAAGAGTCTGTACAGTCGT +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASRLDWA*KSLYSR
Trigger: ACGACTGTACAGACTCTTTCACGCCCAATCAAGTCT...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGTCTTGATGAGATACTaGAGCATTGGATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLVLMRY*SIGCPL
Trigger: CAGTGGGCATCCAATGCTTCAGTATCTCATCAAGAC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGGGAAATGCCTTCACTaGGATCTATCACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLGKCLH*DLSPWF
Trigger: GAACCAAGGTGATAGATCTCAGTGAAGGCATTTCCC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGCCCTACCTGGCTCTTaGTTAGCTCATCGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLALPGS*LAHRPA
Trigger: AGCGGGACGATGAGCTAATCAAGAGCCAGGTAGGGC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTGAGATACTGAAGCATTaGATGCCCACTGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASEILKH*MPTDPG
Trigger: TCCTGGATCAGTGGGCATCCAATGCTTCAGTATCTC...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATGTCCGCATTGGGAACTaGGGGTGGGGCGAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYVRIGN*GWGEAH
Trigger: ATGTGCCTCGCCCCACCCCCAGTTCCCAATGCGGAC...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGGGTGGGGATACCACTaGAGACCAGCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLGWGYH*RPAVQT
Trigger: TGTCTGCACTGCTGGTCTCCAGTGGTATCCCCACCC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACGTCTCCAGTTTCAAATaGAGGCTCTGTCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDVSSFK*RLCLHA
Trigger: TGCATGGAGACAGAGCCTTCATTTGAAACTGGAGAC...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGCATTGGATGCCCACTaGTCCAGGAAACCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENALDAH*SRKPWG
Trigger: GCCCCAGGGTTTCCTGGATCAGTGGGCATCCAATGC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGCTCGCAGCCACACTTaGAGTGTAAAGGCGTCGCGG +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENARSHT*SVKASR
Trigger: CCGCGACGCCTTTACACTGCAAGTGTGGCTGCGAGC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTATCACACACACCATTCTaGTGCTTCTTCATGAACGCA +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLSHTPF*CFFMNA
Trigger: TGCGTTCATGAAGAAGCAGCAGAATGGTGTGTGTGA...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTCTGGGTTGGTATCATTaGAGAGGTCTCCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASLGWYH*RGLQFQ
Trigger: TTGAAACTGGAGACCTCTGCAATGATACCAACCCAG...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTTCTGGCAGCTCACAGTaGACTGGGCACCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLSGSSQ*TGHHGS
Trigger: ACTACCATGGTGCCCAGTGCACTGTGAGCTGCCAGA...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACCTGCAGCTCAAGACATaGAGGCCTAGATCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDLQLKT*RPRSWL
Trigger: AAGCCATGATCTAGGCCTCCATGTCTTGAGCTGCAG...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACGTTGTCTCCCATGAATaGCTCACAGCCTTTGACACA +
Preference number: 4 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDVVSHE*LTAFDT
Trigger: TGTGTCAAAGGCTGTGAGCCATTCATGGGAGACAAC...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACGTGTTGAAGAAGCCATaGAAGCCACAAGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDVLKKP*KPQVSF
Trigger: GAATGACACTTGTGGCTTTCATGGCTTCTTCAACAC...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGTTCATCAATGCAGTTaGAGGAAACTTCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLVHQCS*RKLLAC
Trigger: GCAAGCAAGAAGTTTCCTTCAACTGCATTGATGAAC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACGGTTGCTGGAACAGTTaGGAGAAGCATTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHGCWNS*EKHSPR
Trigger: CCGTGGGGAATGCTTCTCTCAACTGTTCCAGCAACC...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGCTGAGCACTGGCCTTaGATCTCTCGGCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRAEHWP*ISRQTW
Trigger: CCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTAATGCCATAGAAAGATaGGTTCAAGACAATACCGCC +
Preference number: 4 (lower is better)
Translates to: MNYTSLVGMRQATNWVASNAIER*VQDNTA
Trigger: GGCGGTATTGTCTTGAACCCATCTTTCTATGGCATT...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTCAGGTGCTGGCTTTCTaGAGGGCTGCCAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVQVLAF*RAASSG
Trigger: ACCAGAGCTGGCAGCCCTCCAGAAAGCCAGCACCTG...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGAGGTAGCAGCCTTGTaGCTCAGGGCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYEVAAL*LRAGWR
Trigger: CCTCCAGCCTGCCCTGAGCCACAAGGCTGCTACCTC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACGAGTCTGATGGTAAGTaGGATATCACAGAAAACATT +
Preference number: 4 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDESDGK*DITENI
Trigger: AATGTTTTCTGTGATATCCCACTTACCATCAGACTC...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGGATACCAAGCATGCTaGGAAATGCCTTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDGYQAC*EMPSLR
Trigger: TCTCAGTGAAGGCATTTCCCAGCATGCTTGGTATCC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp TTACTTATCTGGAAGGATGGCCCTGTCACCACTCTTTaGCTTGTCCCTTCTAAGCTGACACAGCACATCAGA +
Preference number: 4 (lower is better)
Translates to: LLIWKDGPVTTL*LVPSKLTQHIR
Trigger: TCTGATGTGCTGTGTCAGCTTAGAAGGGACAAGCAAAAGAGTGGTGACAGGGCCATCCTTCCAGATAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp GCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTaGCTTTACACCCCACCTCACCTACCCACACTGACT +
Preference number: 4 (lower is better)
Translates to: AKACYLRLLISP*LYTPPHLPTLT
Trigger: AGTCAGTGTGGGTAGGTGAGGTGGGGTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp CTCATTAAGGTGGATTGTAACCCAGGCCTTCCAGCTTaGTGCCATGAAATGTTGATCAAGCACTCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LIKVDCNPGLPA*CHEMLIKHSLS
Trigger: AGACAGGGAGTGCTTGATCAACATTTCATGGCACAAAGCTGGAAGGCCTGGGTTACAATCCACCTTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACCCATCCTCGATCACGTaGGGTATAAGAACATTTGTC +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDPSSIT*GIRTFV
Trigger: GACAAATGTTCTTATACCTCACGTGATCGAGGATGG...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGTTGCAAAGAAAATATTaGGATGTGTTGATCCGTCCA +
Preference number: 4 (lower is better)
Translates to: AANVVPRSDLENGWNLEGLQRKY*DVLIRP
Trigger: TGGACGGATCAACACATCTCAATATTTTCTTTGCAA...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGGGCAGTCGGCAGCTTaGCAGGCAAAATGCACACAG +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRGQSAA*QAKCTQ
Trigger: CTGTGTGCATTTTGCCTGTCAAGCTGCCGACTGCCC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACCGGTACATGTCACTGTaGTGCTTGGCCCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHRYMSL*CLALPG
Trigger: GCCAGGTAGGGCCAAGCATCACAGTGACATGTACCG...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGTCCCATGGCCAAGTTaGCACTCCTGCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRVPWPS*HSCQLL
Trigger: GAGGAGTTGGCAGGAGTGGCAACTTGGCCATGGGAC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACCCCTGTGATCACTGCTaGAGACTTCTGGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHPCDHC*RLLATL
Trigger: GAGGGTGGCCAGAAGTCTCCAGCAGTGATCACAGGG...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACAGCTGCAGCAACCATTaGCTGAGAGAAATATGTCTG +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDSCSNH*LREICL
Trigger: CAGACATATTTCTCTCAGCCAATGGTTGCTGCAGCT...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTTTTGGGGCTGAGCACTaGCCTTGCATCTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVFGAEH*PCISRQ
Trigger: CTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAA...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGCAGGACTGGATTTCTaGGATGCCACGGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENAGLDF*DATEDV
Trigger: CACATCTTCCGTGGCATCTCAGAAATCCAGTCCTGC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGCAAAGGTCACATGCTaGTCCCAATTCTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDAKVTC*SQFSFK
Trigger: TTTGAAAGAGAATTGGGATCAGCATGTGACCTTTGC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGACCTGGGAGGTAGCTaGGATGGGCATCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYDLGGS*DGHQWW
Trigger: CCACCATTGATGCCCATCGCAGCTACCTCCCAGGTC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTCAAGGATACCAAGCATaGTGGGAAATGCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLQGYQA*WEMPSL
Trigger: CAGTGAAGGCATTTCCCAGCATGCTTGGTATCCTTG...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGTGAATAATTACAGCTaGAGCAACCATTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDVNNYS*SNHWLR
Trigger: TCTCAGCCAATGGTTGCTGCAGCTGTAATTATTCAC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGTGGTGGTCACTTTCCTaGCCCGGTCTGTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRWWSLS*PGLSSR
Trigger: CCTTGAAGACAGACCGGGCCAGGAAAGTGACCACCA...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACACACTTCTGGGTCAGTaGGCTGAATATGCCACCTAC +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHTLLGQ*AEYATY
Trigger: GTAGGTGGCATATTCAGCCCACTGACCCAGAAGTGT...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGGGCTGTTCAACATCTaGGTGACCTTCTGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRGLFNI*VTFCFP
Trigger: CGGGAAGCAGAAGGTCACCCAGATGTTGAACAGCCC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACAATGACAACCCAACCTaGGCACTGCTGGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHNDNPT*ALLVLM
Trigger: CATCAAGACCAGCAGTGCCCAGGTTGGGTTGTCATT...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGCTCACACAAGGCCTCTaGGAAGGACCACAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRLTQGL*EGPQSI
Trigger: GATGGACTGTGGTCCTTCCCAGAGGCCTTGTGTGAG...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATATGGACTCGCTGTTATaGTCCAGGCACGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENMDSLL*SRHEMA
Trigger: TGCCATCTCGTGCCTGGACCATAACAGCGAGTCCAT...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp TCCACTCCATCATTCAACATGGTGAGATTCAGTTCATaGCCCCACAGTTGGTCCTTCCTGGGTGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: STPSFNMVRFSS*PHSWSFLGEIK
Trigger: TTTAATTTCACCCAGGAAGGACCAACTGTGGGGCAATGAACTGAATCTCACCATGTTGAATGATGGAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp GCATGCCTGTGTACTAACCACAGATGTGCATACTCCTaGATACACACACCGTTTTGTTGTTCTTTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ACLCTNHRCAYS*IHTPFCCSFGL
Trigger: TAGCCCAAAAGAACAACAAAACGGTGTGTGTATCAAGGAGTATGCACATCTGTGGTTAGTACACAGGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACTCACAGAAAACATTCTaGGGACCCAAAGAGATATTC +
Preference number: 4 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDSQKTF*GPKEIF
Trigger: GAATATCTCTTTGGGTCCTCAGAATGTTTTCTGTGA...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTCCATCTTTCCGGCAGTaGATGATATTGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVPSFRQ*MILLPR
Trigger: CCGTGGGAGCAATATCATTCACTGCCGGAAAGATGG...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGGAGGTCAGCATTGCTaGATCAATCTCCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRGGQHC*INLQVL
Trigger: GAGCACCTGGAGATTGATGCAGCAATGCTGACCTCC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATTCTTTACTGTGGAGGTaGAGCAGTCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYSLLWR*SSPHHH
Trigger: ATGATGGTGGGGACTGCTGCACCTCCACAGTAAAGA...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGCAGTACCCACTTCCGTaGGTGTATATGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRQYPLP*VYMAAG
Trigger: ACCTGCTGCCATATACACCCACGGAAGTGGGTACTG...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp CATCTGAAAGATTATGTGGAAAATATGATGACTATGTaGGGTACTCAGTCTGGATCTCCAGGGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HLKDYVENMMTM*GTQSGSPGLPF
Trigger: GAAGGGAAGCCCTGGAGATCCAGACTGAGTACCCAACATAGTCATCATATTTTCCACATAATCTTTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp CTTAGATGCAGTGTGGCTTACACATGGGCTGGCATTTaGCATTCTGTTCCAGACTTTGTTTTATTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LRCSVAYTWAGI*HSVPDFVLLVG
Trigger: ACCAACCAATAAAACAAAGTCTGGAACAGAATGCAAAATGCCAGCCCATGTGTAAGCCACACTGCATCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp GGCAATTTGATGACTTCTCCAAGATCACTGAGTAAATaGAAGGCTGGAGAAAAGCATTCTGGAGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: GNLMTSPRSLSK*KAGEKHSGALC
Trigger: GCACAAAGCTCCAGAATGCTTTTCTCCAGCCTTCAATTTACTCAGTGATCTTGGAGAAGTCATCAAATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGTGTCATACAGCCCTGTaGTCACTGCTGGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRCHTAL*SLLETS
Trigger: AGAAGTCTCCAGCAGTGATCACAGGGCTGTATGACA...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGAACTGTGTGTGGGTTaGCAGCTGAATTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRELCVG*QLNLDS
Trigger: GGAGTCCAAATTCAGCTGTCAACCCACACACAGTTC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATCAAGCAACTGCACACTaGTGGTCTCTTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENQATAH*WSLAFG
Trigger: ACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTG...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTTGTACAGTCGTCATCTaGGTAGCTCATGAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLCTVVI*VAHEVV
Trigger: AACAACTTCATGAGCTACGCAGATGACGACTGTACA...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGGTACTGGTACACACTaGCAAGTTTCAGATCCGTGT +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENGTGTH*QVSDPC
Trigger: ACACGGATCTGAAACTTGGCAGTGTGTACCAGTACC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTTGGTATCAAGCAACTaGACACTGATGGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHLVSSN*TLMVSC
Trigger: GCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTTCAGGGGATTGTTTCTaGAGCTCAAGACATGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVSGDCF*SSRHGG
Trigger: GCCTCCATGTCTTGAGCTGCAGAAACAATCCCCTGA...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACGTTTACACTTGTACTTaGAGAAGGAGCCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHVYTCT*RRSPPC
Trigger: ACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAAC...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGACTGGAGACCAGCAGTaGAGACAATCCTCTGTACTC +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRTGDQQ*RQSSVL
Trigger: GAGTACAGAGGATTGTCTGCACTGCTGGTCTCCAGT...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGACATCAGTGATGTCTaGGTCACAGCACTCTCCACC +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYDISDV*VTALST
Trigger: GGTGGAGAGTGCTGTGACCCAGACATCACTGATGTC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACATGCTTGGCCCTACCTaGCTCTTGATTAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHMLGPT*LLISSS
Trigger: CGATGAGCTAATCAAGAGCCAGGTAGGGCCAAGCAT...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACTGCATTCTGGAGACTTaGTTGGGCGTGAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHCILET*LGVKES
Trigger: AGACTCTTTCACGCCCAATCAAGTCTCCAGAATGCA...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACGCATTGAAAGCATATTaGACCAGGATTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHALKAY*TRILPS
Trigger: AGAAGGGAGAATCCTGGTGCAATATGCTTTCAATGC...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTCAGAAAGCTGTTGTTaGCTTTCAGCTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYSESCC*LSAGQG
Trigger: ACCCTGCCCAGCTGAAAGGCAACAACAGCTTTCTGA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATGGAGAAAAAGTAGCGTaGATCTCTGTTGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYGEKVA*ISVALI
Trigger: GATCAAGGCAACAGAGATCCACGCTACTTTTTCTCC...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTCAATCTCATGAATCATaGTGTGGGTGTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVQSHES*CGCVRE
Trigger: TTCCCGGACACACCCACACCATGATTCATGAGATTG...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTATCTTCTACCAAAGGTaGTACCCTCTGGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVIFYQR*YPLDRR
Trigger: TCTCCTGTCCAGAGGGTACCACCTTTGGTAGAAGAT...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTTTTGGTCTTTACTGTaGAGGTGCAGCAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYFWSLL*RCSSPH
Trigger: GTGGGGACTGCTGCACCTCCACAGTAAAGACCAAAA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACCATCTGCGTAGCTCATaGAGTTGTTGTAAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHHLRSS*SCCKEC
Trigger: ACACTCCTTACAACAACTTCATGAGCTACGCAGATG...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATTTGAAGGAAACTTCTTaGTTGCAGAAAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENLKETS*LQKREQ
Trigger: CTGCTCCCTTTTCTGCAAGCAAGAAGTTTCCTTCAA...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGCTCTCTTCATTTCCTaGAATGGTGATAATCCGGTA +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRALFIS*NGDNPV
Trigger: TACCGGATTATCACCATTTCAGGAAATGAAGAGAGC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGACTGGATTTCTGAGATaGCACGGAAGATGTGATAGA +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWRTGFLR*HGRCDR
Trigger: TCTATCACATCTTCCGTGGCATCTCAGAAATCCAGT...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR GCA 90 bp TTATCTATTAGGCTCAGCAAATATGAATTTGTTCATAACAGGCTTGAATGGCGGGAGTATAGATTTGGATaGCATATACCTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LSIRLSKYEFVHNRLEWREYRFG*HIPPHP
Trigger: TGGGTGAGGAGGTATATGGCATCCAAATCTATACTC...CCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACCCTAGATCATGGCTTTaGTCTTTGGTATCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYPRSWL*SLVSSN
Trigger: GTTGCTTGATACCAAAGATCAAAGCCATGATCTAGG...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATTGTATGGTTACATTCTaGATCACATTTTTCATCCCC +
Preference number: 4 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENCMVTF*ITFFIP
Trigger: GGGGATGAAAAATGTGATCCAGAATGTAACCATACA...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp AATAGGGCTTATATTCTTAGGTTTTCACCATGCATTTCAGTCCCTTGTAATCACTCACATTCTTCTCCTTaGTCTTTTTGGATAACGCCA +
Preference number: 4 (lower is better)
Translates to: NRAYILRFSPCISVPCNHSHSSP*SFWITP
Trigger: TGGCGTTATCCAAAAAGACCAAGGAGAAGAATGTGA...GTGATTACAAGGGACTGAAATGCATGGTGAAAACCTAAGAATATAAGCCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACCATGGCTTTGATCTTTaGTATCAAGCAACTGCACAC +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYHGFDL*YQATAH
Trigger: GTGTGCAGTTGCTTGATACCAAAGATCAAAGCCATG...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp AGCCTCTTTTATCTATTAGGCTCAGCAAATATGAATTaGTTCATAACAGGCTTGAATGGCGGTGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLFYLLGSANMN*FITGLNGGEKK
Trigger: TTTCTTCTCACCGCCATTCAAGCCTGTTATGAACAAATTCATATTTGCTGAGCCTAATAGATAAAAGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
3UTR CAA 72 bp GGTTTTCACCATGCATTTCAGTCCCTTGTAATCACTTaGTCTCCTATTAATTTCAGTCTTTACAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GFHHAFQSLVIT*SPINFSLYSFV
Trigger: GACAAAGCTGTAAAGACTGAAATTAATAGGAGACAAAGTGATTACAAGGGACTGAAATGCATGGTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR TCA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACAATATTGAGATGTGTTaGTCCGTCCAGTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYNIEMC*SVQSKN
Trigger: ATTCTTAGACTGGACGGATCAACACATCTCAATATT...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TGTGCCCCACAACCTGGGGCGCAAGAGCTACAGGTGCTGGCTTTCTaGAGGGCTGCCAGCTCTGGTATACGAGGTCCAGGTAACAGTGCA +
Preference number: 5 (lower is better)
Translates to: CAPQPGAQELQVLAF*RAASSGIRGPGNSA
Trigger: TGCACTGTTACCTGGACCTCGTATACCAGAGCTGGCAGCCCTCCAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GGGAACCACTCTAGCATCACAGAGTCCATTGTGTGCCCCACAACCTaGGGCGCAAGAGCTACAGGTGCTGGCTTTCTGGAGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GNHSSITESIVCPTT*GARATGAGFLEGCQ
Trigger: CTGGCAGCCCTCCAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACACAATGGACTCTGTGATGCTAGAGTGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp CCATCGATGGGTGGGAACCACTCTAGCATCACAGAGTCCATTGTGTaGCCCACAACCTGGGGCGCAAGAGCTACAGGTGCTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PSMGGNHSSITESIV*PTTWGARATGAGFL
Trigger: CAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACACAATGGACTCTGTGATGCTAGAGTGGTTCCCACCCATCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GGGAACTGGGGGTGGGGCGAGGCACATGAGCTCACACAAGGCCTCTaGGAAGGACCACAGTCCATCTTCCATACAGGTCAGAAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: GNWGWGEAHELTQGL*EGPQSIFHTGQKAV
Trigger: AACAGCTTTCTGACCTGTATGGAAGATGGACTGTGGTCCTTCCCAGAGGCCTTGTGTGAGCTCATGTGCCTCGCCCCACCCCCAGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp CGGCAGACGTGGAAGGAACCACTCCAAGTGCCATCTTTCCGGCAGTaGATGATATTGCTCCCACGGCCCTGGGAGGCATCACTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RQTWKEPLQVPSFRQ*MILLPRPWEASLSS
Trigger: TGAAGACAGTGATGCCTCCCAGGGCCGTGGGAGCAATATCATTCACTGCCGGAAAGATGGCACTTGGAGTGGTTCCTTCCACGTCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GTGGTTGCTGGAACAGTTGAGAGAAGCATTCCCCACGGCCAGTTCTaGGCAGTCGGCAGCTTGACAGGCAAAATGCACACAGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VVAGTVERSIPHGQF*AVGSLTGKMHTALL
Trigger: GAGCAGAGCTGTGTGCATTTTGCCTGTCAAGCTGCCGACTGCCCAGAACTGGCCGTGGGGAATGCTTCTCTCAACTGTTCCAGCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp ACCCTCTGGACAGGAGAAGGAGGCAGCATAGACGTGATGGTGATCTaGGATACCACAGTCCACCGGCTCACATGCCACCTGCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: TLWTGEGGSIDVMVI*DTTVHRLTCHLLVP
Trigger: TGGAACAAGCAGGTGGCATGTGAGCCGGTGGACTGTGGTATCCCAGATCACCATCACGTCTATGCTGCCTCCTTCTCCTGTCCAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGTCCACCTGGGGGCTGTaGCCATCCTTCATGGGGGAC +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGSTWGL*PSFMGD
Trigger: GTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGGA...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGTCTGTAGGTCCGCATaGGGAACTGGGGGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLVCRSA*GTGGGA
Trigger: CGCCCCACCCCCAGTTCCCAATGCGGACCTACAGAC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp GACTCCAGTGTCCTGACGGTCCACAGGGCATGGGGGAGGAGGCATTaGAAGCATATTGCACCAGGATTCTCCCTTCTAGGCAAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: DSSVLTVHRAWGRRH*KHIAPGFSLLGKGH
Trigger: GTGACCTTTGCCTAGAAGGGAGAATCCTGGTGCAATATGCTTTCAATGCCTCCTCCCCCATGCCCTGTGGACCGTCAGGACACTGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp AGCAGCCTTGTGGCTCAGGGCAGGCTGGAGGAACTGTGTGTGGGTTaGCAGCTGAATTTGGACTCCAGGTTCGGACACTGGATTTACAGG +
Preference number: 5 (lower is better)
Translates to: SSLVAQGRLEELCVG*QLNLDSRFGHWIYR
Trigger: CCTGTAAATCCAGTGTCCGAACCTGGAGTCCAAATTCAGCTGTCAACCCACACACAGTTCCTCCAGCCTGCCCTGAGCCACAAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp TGGGAAATGCCTTCACTGAGATCTATCACCTTGGTTCGACACACCTaGGATGCCGCTGGCTGCCCAATGACAACCCAACCTGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: WEMPSLRSITLVRHT*DAAGCPMTTQPGHC
Trigger: GCAGTGCCCAGGTTGGGTTGTCATTGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCAAGGTGATAGATCTCAGTGAAGGCATTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp CTGGGTCAGTGGGCTGAATATGCCACCTACTTGCTCAGCCGAAGTTaGCACCTGGGCACCATTCATATAGAGCTTCATCAGCCGCCCATC +
Preference number: 5 (lower is better)
Translates to: LGQWAEYATYLLSRS*HLGTIHIELHQPPI
Trigger: GATGGGCGGCTGATGAAGCTCTATATGAATGGTGCCCAGGTGGCAACTTCGGCTGAGCAAGTAGGTGGCATATTCAGCCCACTGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp AATGCCTTCACTGAGATCTATCACCTTGGTTCGACACACCTGAGATaGCGCTGGCTGCCCAATGACAACCCAACCTGGGCACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: NAFTEIYHLGSTHLR*RWLPNDNPTWALLV
Trigger: GACCAGCAGTGCCCAGGTTGGGTTGTCATTGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCAAGGTGATAGATCTCAGTGAAGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp TCCGAGATGAGCCAGGCACGTGGTATCCAGGTTTACACTTGTACTTaGAGAAGGAGCCCACCTTGTGCTTGTTCTCTCGACACCGGGCTG +
Preference number: 5 (lower is better)
Translates to: SEMSQARGIQVYTCT*RRSPPCACSLDTGL
Trigger: CAGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp AAATTAGTGTCCAACAGGAAGCCGTGGGCATTGCTGAATTCCACCTaGGGGCTGTTGCCATCCTTCATGGGGGACCAAGTGCGCTTCACG +
Preference number: 5 (lower is better)
Translates to: KLVSNRKPWALLNST*GLLPSFMGDQVRFT
Trigger: CGTGAAGCGCACTTGGTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGACACTAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TGCCCACAAAGAGGGGGCTCCAAATTAGTGTCCAACAGGAAGCCGTaGGCATTGCTGAATTCCACCTGGGGGCTGTTGCCATCCTTCATG +
Preference number: 5 (lower is better)
Translates to: CPQRGGSKLVSNRKP*ALLNSTWGLLPSFM
Trigger: CATGAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGACACTAATTTGGAGCCCCCTCTTTGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp CAACCCAACCTGGGCACTGCTGGTCTTGATGAGATACTGAAGCATTaGATGCCCACTGATCCAGGAAACCCTGGGGCGTGTAGACACCAC +
Preference number: 5 (lower is better)
Translates to: QPNLGTAGLDEILKH*MPTDPGNPGACRHH
Trigger: GTGGTGTCTACACGCCCCAGGGTTTCCTGGATCAGTGGGCATCCAATGCTTCAGTATCTCATCAAGACCAGCAGTGCCCAGGTTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TCACAGCCTTTGACACAGTGGATCAGAGCAGGGTGGGGATACCACTaGAGACCAGCAGTGCAGACAATCCTCTGTACTCGTGTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SQPLTQWIRAGWGYH*RPAVQTILCTRVGF
Trigger: GAACCCCACACGAGTACAGAGGATTGTCTGCACTGCTGGTCTCCAGTGGTATCCCCACCCTGCTCTGATCCACTGTGTCAAAGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp TTGTGGCTCAGGGCAGGCTGGAGGAACTGTGTGTGGGTTGACAGCTaGATTTGGACTCCAGGTTCGGACACTGGATTTACAGGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LWLRAGWRNCVWVDS*IWTPGSDTGFTGLF
Trigger: GAACAGCCCTGTAAATCCAGTGTCCGAACCTGGAGTCCAAATTCAGCTGTCAACCCACACACAGTTCCTCCAGCCTGCCCTGAGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GACCTGGGAGGTAGCTGCGATGGGCATCAATGGTGGTCACTTTCCTaGCCCGGTCTGTCTTCAAGGAGAAAAAGTAGCGTGGATCTCTGT +
Preference number: 5 (lower is better)
Translates to: DLGGSCDGHQWWSLS*PGLSSRRKSSVDLC
Trigger: ACAGAGATCCACGCTACTTTTTCTCCTTGAAGACAGACCGGGCCAGGAAAGTGACCACCATTGATGCCCATCGCAGCTACCTCCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GATGTACCCACTGACCTGGGAGGTAGCTGCGATGGGCATCAATGGTaGTCACTTTCCTGGCCCGGTCTGTCTTCAAGGAGAAAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: DVPTDLGGSCDGHQW*SLSWPGLSSRRKSS
Trigger: GCTACTTTTTCTCCTTGAAGACAGACCGGGCCAGGAAAGTGACCACCATTGATGCCCATCGCAGCTACCTCCCAGGTCAGTGGGTACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAAGGAAGCCGTGGGCATaGCTGAATTCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLRKPWA*LNSTWG
Trigger: CCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCT...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGGCCCTACCTGGCTCTaGATTAGCTCATCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLGPTWL*ISSSSR
Trigger: GCGGGACGATGAGCTAATCAAGAGCCAGGTAGGGCC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACTTTCCGGTTGTGTTCTaGGGCCTCAGGGTCTCGACA +
Preference number: 5 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDFPVVF*GLRVST
Trigger: TGTCGAGACCCTGAGGCCCAAGAACACAACCGGAAA...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp CGTAGTTACAGTCCATGTCACACACACCATTCTGCTGCTTCTTCATaGACGCAGGGTAGCGCAGCTGGCGGCAATCTCCACCATCATGAC +
Preference number: 5 (lower is better)
Translates to: RSYSPCHTHHSAASS*TQGSAAGGNLHHHD
Trigger: GTCATGATGGTGGAGATTGCCGCCAGCTGCGCTACCCTGCGTTCATGAAGAAGCAGCAGAATGGTGTGTGTGACATGGACTGTAACTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp GCTCTGTCTCCATGCAGGGATCACTGCAGGACTGGATTTCTGAGATaGCACGGAAGATGTGATAGAGGCCCAGGCTATGCCCAATCTCAT +
Preference number: 5 (lower is better)
Translates to: ALSPCRDHCRTGFLR*HGRCDRGPGYAQSH
Trigger: ATGAGATTGGGCATAGCCTGGGCCTCTATCACATCTTCCGTGGCATCTCAGAAATCCAGTCCTGCAGTGATCCCTGCATGGAGACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp TGGTATCCAGGTTTACACTTGTACTTGCAGAAGGAGCCCACCTTGTaGTTGTTCTCTCGACACCGGGCTGTCTGTAGGTCCGCATTGGGA +
Preference number: 5 (lower is better)
Translates to: WYPGLHLYLQKEPTL*LFSRHRAVCRSALG
Trigger: TCCCAATGCGGACCTACAGACAGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp CTAGATGTACCCACTGACCTGGGAGGTAGCTGCGATGGGCATCAATaGTGGTCACTTTCCTGGCCCGGTCTGTCTTCAAGGAGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: LDVPTDLGGSCDGHQ*WSLSWPGLSSRRKS
Trigger: ACTTTTTCTCCTTGAAGACAGACCGGGCCAGGAAAGTGACCACCATTGATGCCCATCGCAGCTACCTCCCAGGTCAGTGGGTACATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GGGGTGTGGAGGCCACGGGTTTCCATGTCGGATACAATCTCTCGCTaGGTTCTTGCTACTTTCCATAGACTGAAGTGTTCAATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GVWRPRVSMSDTISR*VLATFHRLKCSMWP
Trigger: GGGCCACATTGAACACTTCAGTCTATGGAAAGTAGCAAGAACCCAGCGAGAGATTGTATCCGACATGGAAACCCGTGGCCTCCACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp CACTGCAATTTGAGGTTACTGTTGAGTTGGTTTGGGGCTGAGCACTaGCCTTGCATCTCTCGGCAGACGTGGAAGGAACCACTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: HCNLRLLLSWFGAEH*PCISRQTWKEPLQV
Trigger: CACTTGGAGTGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTCAACAGTAACCTCAAATTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGTCAGAAAGCTGTTGTaGCCTTTCAGCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGVRKLL*PFSWAG
Trigger: CCCTGCCCAGCTGAAAGGCAACAACAGCTTTCTGAC...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACGAGCCCACCTTGTGCTaGTTCTCTCGACACCGGGCT +
Preference number: 5 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDEPTLC*FSRHRA
Trigger: AGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTC...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp GTTGCCAGCTCACCGTTGGATTCTCATGGTGATCATCATAGATGTTaGCCACACGATAGCGGACCACCTTGGGCTGCCGAAAACTTGGGA +
Preference number: 5 (lower is better)
Translates to: VASSPLDSHGDHHRC*PHDSGPPWAAENLG
Trigger: TCCCAAGTTTTCGGCAGCCCAAGGTGGTCCGCTATCGTGTGGTCAACATCTATGATGATCACCATGAGAATCCAACGGTGAGCTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp GTCAGAAAGCTGTTGTTGCCTTTCAGCTGGGCAGGGTGGCGACACTaGAAAGAACATCTTCTACCAAAGGTGGTACCCTCTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: VRKLLLPFSWAGWRH*KEHLLPKVVPSGQE
Trigger: CTCCTGTCCAGAGGGTACCACCTTTGGTAGAAGATGTTCTTTTCAGTGTCGCCACCCTGCCCAGCTGAAAGGCAACAACAGCTTTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp ATCAGGACACTGCAATTTGAGGTTACTGTTGAGTTGGTTTGGGGCTaGGCACTGGCCTTGCATCTCTCGGCAGACGTGGAAGGAACCACT +
Preference number: 5 (lower is better)
Translates to: IRTLQFEVTVELVWG*ALALHLSADVEGTT
Trigger: AGTGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTCAACAGTAACCTCAAATTGCAGTGTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp ATAGACGTGATGGTGATCTGGGATACCACAGTCCACCGGCTCACATaGCACCTGCTTGTTCCATTTGCCCTCGGTACATGTCACTGTGAT +
Preference number: 5 (lower is better)
Translates to: IDVMVIWDTTVHRLT*HLLVPFALGTCHCD
Trigger: ATCACAGTGACATGTACCGAGGGCAAATGGAACAAGCAGGTGGCATGTGAGCCGGTGGACTGTGGTATCCCAGATCACCATCACGTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp AATTTGAGGTTACTGTTGAGTTGGTTTGGGGCTGAGCACTGGCCTTaGATCTCTCGGCAGACGTGGAAGGAACCACTCCAAGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: NLRLLLSWFGAEHWP*ISRQTWKEPLQVPS
Trigger: AGATGGCACTTGGAGTGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTCAACAGTAACCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GGTCACTTTCCTGGCCCGGTCTGTCTTCAAGGAGAAAAAGTAGCGTaGATCTCTGTTGCCTTGATCACTGGTGGTGTGAATGCCCATGAC +
Preference number: 5 (lower is better)
Translates to: GHFPGPVCLQGEKVA*ISVALITGGVNAHD
Trigger: GTCATGGGCATTCACACCACCAGTGATCAAGGCAACAGAGATCCACGCTACTTTTTCTCCTTGAAGACAGACCGGGCCAGGAAAGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GTCTTGAAAGCCCGTTTCTTGGACTTCCGAGATGAGCCAGGCACGTaGTATCCAGGTTTACACTTGTACTTGCAGAAGGAGCCCACCTTG +
Preference number: 5 (lower is better)
Translates to: VLKARFLDFRDEPGT*YPGLHLYLQKEPTL
Trigger: CAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAAGTCCAAGAAACGGGCTTTCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GAACTGGAAGCCATTAGTGCATTGATAGAGCCCATGGAATTTGGGTaGAGGTGGGTCACAAGTCACCGGCACACAAGTTCCCTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: ELEAISALIEPMEFG*RWVTSHRHTSSLLP
Trigger: TGGCAAGAGGGAACTTGTGTGCCGGTGACTTGTGACCCACCTCCACCCAAATTCCATGGGCTCTATCAATGCACTAATGGCTTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACCAAGTGCGCTTCACGTaGTCCCAGTTCTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDQVRFT*SQFSWR
Trigger: CCTCCAGGAGAACTGGGACAACGTGAAGCGCACTTG...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCGCTGGGTTGGTATCATaGCAGAGGTCTCCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFAGLVS*QRSPVS
Trigger: TGAAACTGGAGACCTCTGCAATGATACCAACCCAGC...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTCTCGAGGTAGCAGCCTaGTGGCTCAGGGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLLEVAA*WLRAGW
Trigger: CCAGCCTGCCCTGAGCCACAAGGCTGCTACCTCGAG...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCAGTGGAGGTCAGCATaGCTGCATCAATCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGQWRSA*LHQSPG
Trigger: ACCTGGAGATTGATGCAGCAATGCTGACCTCCACTG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp TTGGAACAGTTCCCCAGATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCAATGGCTCACAGCCTTaGACACAGTGGATCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LEQFPRWGSENCPSPRCFNGSQP*TQWIRA
Trigger: TGCTCTGATCCACTGTGTCAAAGGCTGTGAGCCATT...GAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATCTGGGGAACTGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp TCATCCCCAATCTTGCTGATGTCACAGTTGGCTAGGATGAGGCGGTaGCGCAGAGAGGAACTGTTTATATTCAGTACCTCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSPILLMSQLARMRR*RREELFIFSTSSSQ
Trigger: CTGGGAGCTGGAGGTACTGAATATAAACAGTTCCTCTCTGCGTCACCGCCTCATCCTAGCCAACTGTGACATCAGCAAGATTGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp GGTCTCCAGTTTCAAATGAAGGCTCTGTCTCCATGCAGGGATCACTaGAGGACTGGATTTCTGAGATGCCACGGAAGATGTGATAGAGGC +
Preference number: 5 (lower is better)
Translates to: GLQFQMKALSPCRDH*RTGFLRCHGRCDRG
Trigger: GCCTCTATCACATCTTCCGTGGCATCTCAGAAATCCAGTCCTGCAGTGATCCCTGCATGGAGACAGAGCCTTCATTTGAAACTGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp CAGGGTCTCCACAAAACTTGTGTTTGGGGGCTGGGTTGGTATCATTaGAGAGGTCTCCAGTTTCAAATGAAGGCTCTGTCTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: QGLHKTCVWGLGWYH*RGLQFQMKALSPCR
Trigger: CCTGCATGGAGACAGAGCCTTCATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp GGAAGGACCACAGTCCATCTTCCATACAGGTCAGAAAGCTGTTGTTaGCTTTCAGCTGGGCAGGGTGGCGACACTGAAAAGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: GRTTVHLPYRSESCC*LSAGQGGDTEKNIF
Trigger: GAAGATGTTCTTTTCAGTGTCGCCACCCTGCCCAGCTGAAAGGCAACAACAGCTTTCTGACCTGTATGGAAGATGGACTGTGGTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GATGTTGACCACACGATAGCGGACCACCTTGGGCTGCCGAAAACTTaGGAGCTGATTGTAACTGGAGATGACTTCTGTGTTGTCACACAG +
Preference number: 5 (lower is better)
Translates to: DVDHTIADHLGLPKT*ELIVTGDDFCVVTQ
Trigger: CTGTGTGACAACACAGAAGTCATCTCCAGTTACAATCAGCTCCCAAGTTTTCGGCAGCCCAAGGTGGTCCGCTATCGTGTGGTCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTTGGGGGCTGGGTTaGTATCATTGCAGAGGTCTCCAGTTTCAAATGAAGGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLVQGLHKTCVWGLG*YHCRGLQFQMKALS
Trigger: AGACAGAGCCTTCATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp CCTTGGTCTTTTTGGATAACGCCATCACCACAGTACCCACTTCCGTaGGTGTATATGGCAGCAGGTGATGGCTCGCTCTCTTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: PWSFWITPSPQYPLP*VYMAAGDGSLSSFP
Trigger: AGGAAATGAAGAGAGCGAGCCATCACCTGCTGCCATATACACCCACGGAAGTGGGTACTGTGGTGATGGCGTTATCCAAAAAGACCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GTGGCGACACTGAAAAGAACATCTTCTACCAAAGGTGGTACCCTCTaGACAGGAGAAGGAGGCAGCATAGACGTGATGGTGATCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VATLKRTSSTKGGTL*TGEGGSIDVMVIWD
Trigger: ATCCCAGATCACCATCACGTCTATGCTGCCTCCTTCTCCTGTCCAGAGGGTACCACCTTTGGTAGAAGATGTTCTTTTCAGTGTCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGGCTCGCAGCCACACTaGCAGTGTAAAGGCGTCGCG +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLGSQPH*QCKGVA
Trigger: CGCGACGCCTTTACACTGCAAGTGTGGCTGCGAGCC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACTGTCCCATGGCCAAGTaGCCACTCCTGCCAACTCCT +
Preference number: 5 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDCPMAK*PLLPTP
Trigger: AGGAGTTGGCAGGAGTGGCAACTTGGCCATGGGACA...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTTGTTTGGGGGCTGGGTaGGTATCATTGCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: MNYTSLVGMRQATNWVASCLGAG*VSLQRS
Trigger: AGACCTCTGCAATGATACCAACCCAGCCCCCAAACA...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCACACTCTGACCCTATaGCATAGCCATCAGGACACT +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGHTLTL*HSHQDT
Trigger: AGTGTCCTGATGGCTATGCAATAGGGTCAGAGTGTG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp GAGGCTACATCTTCTAGCAGAGGTGGGTCTCGAAGCACTTTATACTaGAGAGGTTTACACTGTAGGCAGAGTGGACTGTCTACAGTGGAG +
Preference number: 5 (lower is better)
Translates to: EATSSSRGGSRSTLY*RGLHCRQSGLSTVE
Trigger: CTCCACTGTAGACAGTCCACTCTGCCTACAGTGTAAACCTCTGCAGTATAAAGTGCTTCGAGACCCACCTCTGCTAGAAGATGTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GGAAGATGTGATAGAGGCCCAGGCTATGCCCAATCTCATGAATCATaGTGTGGGTGTGTCCGGGAATGCCATAGAAAGATGGGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GRCDRGPGYAQSHES*CGCVRECHRKMGSR
Trigger: TCTTGAACCCATCTTTCTATGGCATTCCCGGACACACCCACACCATGATTCATGAGATTGGGCATAGCCTGGGCCTCTATCACATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp CACAAGTGTCATTCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTTaGGGGCTGGGTTGGTATCATTGCAGAGGTCTCCAGTTTCAAATG +
Preference number: 5 (lower is better)
Translates to: HKCHSLVQGLHKTCV*GLGWYHCRGLQFQM
Trigger: CATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGAATGACACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACGGCCTCAGCCAGCTGTaGGTGCTGAAAGTCAATCTG +
Preference number: 5 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDGLSQL*VLKVNL
Trigger: CAGATTGACTTTCAGCACCAACAGCTGGCTGAGGCC...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAATTACACATCCCTTGTGGGCATGAGGCAGGCTACCAATTGGGTAGCCTCTCCACAAAACTTGTGTTaGGGGGCTGGGTTGGTATCA +
Preference number: 5 (lower is better)
Translates to: MNYTSLVGMRQATNWVASPQNLC*GAGLVS
Trigger: TGATACCAACCCAGCCCCCAAACACAAGTTTTGTGG...AGAGGCTACCCAATTGGTAGCCTGCCTCATGCCCACAAGGGATGTGTAATTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGGGCATTGAAAGCATATaGCACCAGGATTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGGIESI*HQDSPF
Trigger: GAAGGGAGAATCCTGGTGCAATATGCTTTCAATGCC...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACATGGGGGAGGAGGCATaGAAAGCATATTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDMGEEA*KAYCTR
Trigger: CCTGGTGCAATATGCTTTCAATGCCTCCTCCCCCAT...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GCAGCAAATGTGGTCCCAAGGTCAGATCTGGAAAATGGGTGGAATCTGGAAGGGCACACTGATGGTCTCTaGCTTTTGGTCCCCATAGTA +
Preference number: 5 (lower is better)
Translates to: AANVVPRSDLENGWNLEGHTDGL*LLVPIV
Trigger: TACTATGGGGACCAAAAGCAAGAGACCATCAGTGTG...CCCTTCCAGATTCCACCCATTTTCCAGATCTGACCTTGGGACCACATTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GATGGGGCTCAGAGAACTGTCCATCTCCTCGTTGCTTCCTTGCTGCTAACAGACTCACTGTCTTCACACTaGATCCTGCACTCACTATTG +
Preference number: 5 (lower is better)
Translates to: DGAQRTVHLLVASLLLTDSLSSH*ILHSLL
Trigger: CAATAGTGAGTGCAGGATCAAGTGTGAAGACAGTGA...GTCTGTTAGCAGCAAGGAAGCAACGAGGAGATGGACAGTTCTCTGAGCCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp TTGATCACTGGTGGTGTGAATGCCCATGACCCATCCTCGATCACGTaGGGTATAAGAACATTTGTCATACAGCCCTGTGATCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LITGGVNAHDPSSIT*GIRTFVIQPCDHCW
Trigger: CCAGCAGTGATCACAGGGCTGTATGACAAATGTTCTTATACCTCACGTGATCGAGGATGGGTCATGGGCATTCACACCACCAGTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 90 bp GGCTATGCCCAATCTCATGAATCATGGTGTGGGTGTGTCCGGGAATaGCATAGAAAGATGGGTTCAAGACAATACCGCCCAAGTGCATTA +
Preference number: 5 (lower is better)
Translates to: GYAQSHESWCGCVRE*HRKMGSRQYRPSAL
Trigger: TAATGCACTTGGGCGGTATTGTCTTGAACCCATCTTTCTATGGCATTCCCGGACACACCCACACCATGATTCATGAGATTGGGCATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TGTCCCATCAGTCACCAGGTGAATAATTACAGCTGCAGCAACCATTaGCTGAGAGAAATATGTCTGGAGCCAGAATGTGGTCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CPISHQVNNYSCSNH*LREICLEPECGLRQ
Trigger: CTGCCTCAGACCACATTCTGGCTCCAGACATATTTCTCTCAGCCAATGGTTGCTGCAGCTGTAATTATTCACCTGGTGACTGATGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTACAGCTGCAGCAACCATaGGCTGAGAGAAATATGTCT +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLQLQQP*AERNMS
Trigger: AGACATATTTCTCTCAGCCAATGGTTGCTGCAGCTG...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp AGGATAAGAGCAGATGACAGTGACATCGACAACAGGGTTTGGATGAGGAATGACCAGGTCAGAAAGCTGTaGTTGCCTTTCAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RIRADDSDIDNRVWMRNDQVRKL*LPFSWA
Trigger: TGCCCAGCTGAAAGGCAACAACAGCTTTCTGACCTG...GTCATTCCTCATCCAAACCCTGTTGTCGATGTCACTGTCATCTGCTCTTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAAAGGGAGTGACCTTTTaGGTCTTTACTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLKGVTF*VFTVEV
Trigger: CACCTCCACAGTAAAGACCAAAAAGGTCACTCCCTT...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp AGCGTGGATCTCTGTTGCCTTGATCACTGGTGGTGTGAATGCCCATaGCCCATCCTCGATCACGTGAGGTATAAGAACATTTGTCATACA +
Preference number: 5 (lower is better)
Translates to: SVDLCCLDHWWCECP*PILDHVRYKNICHT
Trigger: TGTATGACAAATGTTCTTATACCTCACGTGATCGAGGATGGGTCATGGGCATTCACACCACCAGTGATCAAGGCAACAGAGATCCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GAAATATGTCTGGAGCCAGAATGTGGTCTGAGGCAGATGGTAGTATaGGTAAGTAATGGTGCAAGGATACCAAGCATGCTGGGAAATGCC +
Preference number: 5 (lower is better)
Translates to: EICLEPECGLRQMVV*VSNGARIPSMLGNA
Trigger: GGCATTTCCCAGCATGCTTGGTATCCTTGCACCATTACTTACCCATACTACCATCTGCCTCAGACCACATTCTGGCTCCAGACATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATTGGCCAATGTGGGAATGAGACAGAAAAGTCTCGGCAGAGGTCCAGTGTGCTAGTTGAAGGAAACTTCTaGCTTGCAGAAAAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: IGQCGNETEKSRQRSSVLVEGNF*LAEKGA
Trigger: TGCTCCCTTTTCTGCAAGCAAGAAGTTTCCTTCAAC...TAGCACACTGGACCTCTGCCGAGACTTTTCTGTCTCATTCCCACATTGGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp GGCCTAGATCATGGCTTTGATCTTTGGTATCAAGCAACTGCACACTaGTGGTCTCTTGCTTTTGGTCCCCATAGTATGTCCCATCAGTCA +
Preference number: 5 (lower is better)
Translates to: GLDHGFDLWYQATAH*WSLAFGPHSMSHQS
Trigger: TGACTGATGGGACATACTATGGGGACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAAAGATCAAAGCCATGATCTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp TTGAGTACATTGAGTCTTGAAAGCCCGTTTCTTGGACTTCCGAGATaGGCCAGGCACGTGGTATCCAGGTTTACACTTGTACTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LSTLSLESPFLGLPR*ARHVVSRFTLVLAE
Trigger: TTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAAGTCCAAGAAACGGGCTTTCAAGACTCAATGTACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GATGGCTCGCTCTCTTCATTTCCTGAAATGGTGATAATCCGGTACTaGTACACACTGCCAAGTTTCAGATCCGTGTCCATGAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: DGSLSSFPEMVIIRY*YTLPSFRSVSMNLL
Trigger: CAGAAGATTCATGGACACGGATCTGAAACTTGGCAGTGTGTACCAGTACCGGATTATCACCATTTCAGGAAATGAAGAGAGCGAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTTGGTTGCTGGAACAGTaGAGAGAAGCATTCCCCACG +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLWLLEQ*REAFPT
Trigger: CGTGGGGAATGCTTCTCTCAACTGTTCCAGCAACCA...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCCAGGGGGAAATGCACTATGAGATATGCTTTTGGAGGAACCAAAGTGCTTGACGCCATCTTGAGTACATaGAGTCTTGAAAGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: PRGKCTMRYAFGGTKVLDAILST*SLESPF
Trigger: AAACGGGCTTTCAAGACTCAATGTACTCAAGATGGC...GTCAAGCACTTTGGTTCCTCCAAAAGCATATCTCATAGTGCATTTCCCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp GATGCCATATACCTCCTCACCCACATCCCGGAGTCTGATGGTAAGTaGGATATCACAGAAAACATTCTGAGGACCCAAAGAGATATTCTT +
Preference number: 5 (lower is better)
Translates to: DAIYLLTHIPESDGK*DITENILRTQRDIL
Trigger: AAGAATATCTCTTTGGGTCCTCAGAATGTTTTCTGTGATATCCCACTTACCATCAGACTCCGGGATGTGGGTGAGGAGGTATATGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATTGCATTAGGGCTTCCTaGTCCCATGGCCAAGTTGCC +
Preference number: 5 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYCIRAS*SHGQVA
Trigger: GGCAACTTGGCCATGGGACAAGGAAGCCCTAATGCA...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGTGCATTCTGGAGACTaGATTGGGCGTGAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLVHSGD*IGRERV
Trigger: GACTCTTTCACGCCCAATCAAGTCTCCAGAATGCAC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGGAACTGTGTGTGGGTaGACAGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLGTVCG*TAEFGL
Trigger: GAGTCCAAATTCAGCTGTCAACCCACACACAGTTCC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGTGACGGGGTCAAAGTaGTCGAAAGAGCGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYVTGSK*SKERRA
Trigger: GGCCCTCCGCTCTTTCGACAACTTTGACCCCGTCAC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATCAGAAGGAGCCCACCTaGTGCTTGTTCTCTCGACAC +
Preference number: 5 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYQKEPT*CLFSRH
Trigger: GTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTG...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATTGGGCTGCCGAAAACTaGGGAGCTGATTGTAACTGG +
Preference number: 5 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYWAAEN*GADCNW
Trigger: CCAGTTACAATCAGCTCCCAAGTTTTCGGCAGCCCA...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGGAGATGTTGTAGTGTaGAAAGGCCTCAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENGDVVV*KGLSQL
Trigger: CAGCTGGCTGAGGCCTTTCAACACTACAACATCTCC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACGCATCACAGAGTCCATaGTGTGCCCCACAACCTGGG +
Preference number: 5 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYASQSP*CAPQPG
Trigger: CCCAGGTTGTGGGGCACACAATGGACTCTGTGATGC...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 90 bp TGGAGAGTCAGGATCAAAGCATGTCTTAGTGACATCAGTGATGTCTaGGTCACAGCACTCTCCACCATCAAAATTAAACCTTTCGTAGTT +
Preference number: 5 (lower is better)
Translates to: WRVRIKACLSDISDV*VTALSTIKIKPFVV
Trigger: AACTACGAAAGGTTTAATTTTGATGGTGGAGAGTGCTGTGACCCAGACATCACTGATGTCACTAAGACATGCTTTGATCCTGACTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGAGCAGCCATCCCCATaGACCTTATTCATGTCGTCA +
Preference number: 5 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENEQPSP*TLFMSS
Trigger: TGACGACATGAATAAGGTCAATGGGGATGGCTGCTC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATGGTTTACACTTGTACTaGCAGAAGGAGCCCACCTTG +
Preference number: 5 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENGLHLY*QKEPTL
Trigger: CAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACC...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACCGAAGATCTTTCCGGTaGTGTTCTTGGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYRRSFR*CSWASG
Trigger: CCCTGAGGCCCAAGAACACAACCGGAAAGATCTTCG...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 90 bp ACATCCCGGAGTCTGATGGTAAGTGGGATATCACAGAAAACATTCTaGGGACCCAAAGAGATATTCTTTCCACTGATAGTCAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: TSRSLMVSGISQKTF*GPKEIFFPLIVKSL
Trigger: CAAACTCTTGACTATCAGTGGAAAGAATATCTCTTTGGGTCCTCAGAATGTTTTCTGTGATATCCCACTTACCATCAGACTCCGGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp TCCTTCTGCAAAGGCCTGCTATTTAAGACTGTTAATCTCTCCTTTGCTTTACACTTCTCCTTGGTCTTTTaGGATAACGCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: SFCKGLLFKTVNLSFALHFSLVF*DNAITT
Trigger: TGTGGTGATGGCGTTATCCAAAAAGACCAAGGAGAA...GTGTAAAGCAAAGGAGAGATTAACAGTCTTAAATAGCAGGCCTTTGCAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATCTGGCATCCCTCAACTCTTTCCCAGAATGAGAAGTCTACTCATGAAAGACTTGAAGCCATTAGTGCATaGATAGAGCCCATGGAATTT +
Preference number: 5 (lower is better)
Translates to: IWHPSTLSQNEKSTHERLEAISA*IEPMEF
Trigger: AAATTCCATGGGCTCTATCAATGCACTAATGGCTTC...AAGTCTTTCATGAGTAGACTTCTCATTCTGGGAAAGAGTTGAGGGATGCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATGTCACATTCTTCTCCTaGGTCTTTTTGGATAACGCC +
Preference number: 5 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYVTFFS*VFLDNA
Trigger: GGCGTTATCCAAAAAGACCAAGGAGAAGAATGTGAC...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATATCCTGCACTCACTATaGAACTGGAAGCCATTAGTG +
Preference number: 5 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENILHSL*NWKPLV
Trigger: CACTAATGGCTTCCAGTTCAATAGTGAGTGCAGGAT...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp GAATCACTTTTGAGGCAGTCTACTTGGTTATATGGAGTTTGTTGTAACCTAGTTTTTTCATCCCCAATCTaGCTGATGTCACAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: ESLLRQSTWLYGVCCNLVFSSPI*LMSQLA
Trigger: AGCCAACTGTGACATCAGCAAGATTGGGGATGAAAA...AACTAGGTTACAACAAACTCCATATAACCAAGTAGACTGCCTCAAAAGTGATTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCAAAACAGATGACTGAGGAGATGAGACAAGGAGTTTATTCTCAGGAAGAAAATCTGATAGTCAAGAGTTaGATGTCATTGACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PKQMTEEMRQGVYSQEENLIVKS*MSLTAP
Trigger: TGGAGCTGTCAATGACATCAAACTCTTGACTATCAG...ATTTTCTTCCTGAGAATAAACTCCTTGTCTCATCTCCTCAGTCATCTGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTATCCAGGTTTACACTaGTACTTGCAGAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYYPGLH*YLQKEP
Trigger: GGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp ATGAGGTACAGGAAGAAGAACAGGGTTGTATTTAGTTTTTGCTGTTTACTTTACTTGCCAGCTGCCATCTaGAGTACATTGAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: MRYRKKNRVVFSFCCLLYLPAAI*STLSLE
Trigger: TTCAAGACTCAATGTACTCAAGATGGCAGCTGGCAA...GTAAAGTAAACAGCAAAAACTAAATACAACCCTGTTCTTCTTCCTGTACCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS-3UTR CAA 90 bp CCATATCATTGCTTCCCTGCCCCACCTTTCATAAATTATGTCAAAGTTAGCTATTTTGCAAAGAAAATATaGAGATGTGTTGATCCGTCC +
Preference number: 5 (lower is better)
Translates to: PYHCFPAPPFINYVKVSYFAKKI*RCVDPS
Trigger: GGACGGATCAACACATCTCAATATTTTCTTTGCAAA...ATAGCTAACTTTGACATAATTTATGAAAGGTGGGGCAGGGAAGCAATGATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp GGAGGGCCACCCCCGAGATGGCGACCAGGGGCGAACTaGAGCTCACATGTACCGCCTGGCTGTGGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GGPPPRWRPGAN*SSHVPPGCGRR
Trigger: CCTTCTACCACAGCCAGGCGGTACATGTGAGCTTCAGTTCGCCCCTGGTCGCCATCTCGGGGGTGGCCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp GGAGACTTCTGGCCACCCTCGGCTCGCAGCCACACTTaGAGTGTAAAGGCGTCGCGGGGTAGCTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: GDFWPPSARSHT*SVKASRGSSRS
Trigger: CGACCTGGAGCTACCCCGCGACGCCTTTACACTGCAAGTGTGGCTGCGAGCCGAGGGTGGCCAGAAGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GTGCCCCACAACCTGGGGCGCAAGAGCTACAGGTGCTaGCTTTCTGGAGGGCTGCCAGCTCTGGTATACGAG +
Preference number: 6 (lower is better)
Translates to: VPHNLGRKSYRC*LSGGLPALVYE
Trigger: CTCGTATACCAGAGCTGGCAGCCCTCCAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp ACCTTGTGCTTGTTCTCTCGACACCGGGCTGTCTGTAGGTCCGCATaGGGAACTGGGGGTGGGGCGAGGCACATGAGCTCACACAAGGCC +
Preference number: 6 (lower is better)
Translates to: TLCLFSRHRAVCRSA*GTGGGARHMSSHKA
Trigger: GGCCTTGTGTGAGCTCATGTGCCTCGCCCCACCCCCAGTTCCCAATGCGGACCTACAGACAGCCCGGTGTCGAGAGAACAAGCACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp CCTGGGGGCTGTTGCCATCCTTCATGGGGGACCAAGTaGGCTTCACGTTGTCCCAGTTCTCCTGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PGGCCHPSWGTK*ASRCPSSPGGG
Trigger: TCCTCCTCCAGGAGAACTGGGACAACGTGAAGCGCACTTGGTCCCCCATGAAGGATGGCAACAGCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CAACCTGGGGCGCAAGAGCTACAGGTGCTGGCTTTCTaGAGGGCTGCCAGCTCTGGTATACGAGGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: QPGAQELQVLAF*RAASSGIRGPG
Trigger: ACCTGGACCTCGTATACCAGAGCTGGCAGCCCTCCAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GGGGCTGAGCACTGGCCTTGCATCTCTCGGCAGACGTaGAAGGAACCACTCCAAGTGCCATCTTTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: GAEHWPCISRQT*KEPLQVPSFRQ
Trigger: CTGCCGGAAAGATGGCACTTGGAGTGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp TTGTTCTCTCGACACCGGGCTGTCTGTAGGTCCGCATaGGGAACTGGGGGTGGGGCGAGGCACATGAGCTCA +
Preference number: 6 (lower is better)
Translates to: LFSRHRAVCRSA*GTGGGARHMSS
Trigger: TGAGCTCATGTGCCTCGCCCCACCCCCAGTTCCCAATGCGGACCTACAGACAGCCCGGTGTCGAGAGAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CCCACTGACCTGGGAGGTAGCTGCGATGGGCATCAATaGTGGTCACTTTCCTGGCCCGGTCTGTCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: PTDLGGSCDGHQ*WSLSWPGLSSR
Trigger: CCTTGAAGACAGACCGGGCCAGGAAAGTGACCACCATTGATGCCCATCGCAGCTACCTCCCAGGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GGGTGGGGCGAGGCACATGAGCTCACACAAGGCCTCTaGGAAGGACCACAGTCCATCTTCCATACAGGTCAG +
Preference number: 6 (lower is better)
Translates to: GWGEAHELTQGL*EGPQSIFHTGQ
Trigger: CTGACCTGTATGGAAGATGGACTGTGGTCCTTCCCAGAGGCCTTGTGTGAGCTCATGTGCCTCGCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp AAGCCGTGGGCATTGCTGAATTCCACCTGGGGGCTGTaGCCATCCTTCATGGGGGACCAAGTGCGCTTCACG +
Preference number: 6 (lower is better)
Translates to: KPWALLNSTWGL*PSFMGDQVRFT
Trigger: CGTGAAGCGCACTTGGTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp AGCATTCCCCACGGCCAGTTCTGGGCAGTCGGCAGCTaGACAGGCAAAATGCACACAGCTCTGCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SIPHGQFWAVGS*TGKMHTALLSR
Trigger: CCTGCTGAGCAGAGCTGTGTGCATTTTGCCTGTCAAGCTGCCGACTGCCCAGAACTGGCCGTGGGGAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TCCAACAGGAAGCCGTGGGCATTGCTGAATTCCACCTGGGGGCTGTaGCCATCCTTCATGGGGGACCAAGTGCGCTTCACGTTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SNRKPWALLNSTWGL*PSFMGDQVRFTLSQ
Trigger: CTGGGACAACGTGAAGCGCACTTGGTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp AGTGGCCATCGATGGGTGGGAACCACTCTAGCATCACAGAGTCCATaGTGTGCCCCACAACCTGGGGCGCAAGAGCTACAGGTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SGHRWVGTTLASQSP*CAPQPGAQELQVLA
Trigger: AGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACACAATGGACTCTGTGATGCTAGAGTGGTTCCCACCCATCGATGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp GTGGCTCAGGGCAGGCTGGAGGAACTGTGTGTGGGTTaGCAGCTGAATTTGGACTCCAGGTTCGGACACTGG +
Preference number: 6 (lower is better)
Translates to: VAQGRLEELCVG*QLNLDSRFGHW
Trigger: CCAGTGTCCGAACCTGGAGTCCAAATTCAGCTGTCAACCCACACACAGTTCCTCCAGCCTGCCCTGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TGGTTCGACACACCTGAGATGCCGCTGGCTGCCCAATaGCAACCCAACCTGGGCACTGCTGGTCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: WFDTPEMPLAAQ*QPNLGTAGLDE
Trigger: CTCATCAAGACCAGCAGTGCCCAGGTTGGGTTGTCATTGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp GGTGGGAACCACTCTAGCATCACAGAGTCCATTGTGTaGCCCACAACCTGGGGCGCAAGAGCTACAGGTGCT +
Preference number: 6 (lower is better)
Translates to: GGNHSSITESIV*PTTWGARATGA
Trigger: AGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACACAATGGACTCTGTGATGCTAGAGTGGTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp TCCAACAGGAAGCCGTGGGCATTGCTGAATTCCACCTaGGGGCTGTTGCCATCCTTCATGGGGGACCAAGTG +
Preference number: 6 (lower is better)
Translates to: SNRKPWALLNST*GLLPSFMGDQV
Trigger: CACTTGGTCCCCCATGAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGGGTAGCGAAATTCCAGCTCGAGGTAGCAGCCTTGTaGCTCAGGGCAGGCTGGAGGAACTGTGTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: RVAKFQLEVAAL*LRAGWRNCVWV
Trigger: AACCCACACACAGTTCCTCCAGCCTGCCCTGAGCCACAAGGCTGCTACCTCGAGCTGGAATTTCGCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp TCAGAGCAGGGTGGGGATACCACTGGAGACCAGCAGTaGAGACAATCCTCTGTACTCGTGTGGGGTTCATCC +
Preference number: 6 (lower is better)
Translates to: SEQGGDTTGDQQ*RQSSVLVWGSS
Trigger: GGATGAACCCCACACGAGTACAGAGGATTGTCTGCACTGCTGGTCTCCAGTGGTATCCCCACCCTGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGAGGGGGCTCCAAATTAGTGTCCAACAGGAAGCCGTaGGCATTGCTGAATTCCACCTGGGGGCTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: RGGSKLVSNRKP*ALLNSTWGLLP
Trigger: TGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGACACTAATTTGGAGCCCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp TCTAGCATCACAGAGTCCATTGTGTGCCCCACAACCTaGGGCGCAAGAGCTACAGGTGCTGGCTTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SSITESIVCPTT*GARATGAGFLE
Trigger: CTCCAGAAAGCCAGCACCTGTAGCTCTTGCGCCCCAGGTTGTGGGGCACACAATGGACTCTGTGATGCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp ATCTATCACCTTGGTTCGACACACCTGAGATGCCGCTaGCTGCCCAATGACAACCCAACCTGGGCACTGCTG +
Preference number: 6 (lower is better)
Translates to: IYHLGSTHLRCR*LPNDNPTWALL
Trigger: CAGCAGTGCCCAGGTTGGGTTGTCATTGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCAAGGTGATAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp GGACTCCAGTGTCCTGACGGTCCACAGGGCATGGGGGAGGAGGCATaGAAAGCATATTGCACCAGGATTCTCCCTTCTAGGCAAAGGTCA +
Preference number: 6 (lower is better)
Translates to: GLQCPDGPQGMGEEA*KAYCTRILPSRQRS
Trigger: TGACCTTTGCCTAGAAGGGAGAATCCTGGTGCAATATGCTTTCAATGCCTCCTCCCCCATGCCCTGTGGACCGTCAGGACACTGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp AGTCCATGTCACACACACCATTCTGCTGCTTCTTCATaGACGCAGGGTAGCGCAGCTGGCGGCAATCTCCAC +
Preference number: 6 (lower is better)
Translates to: SPCHTHHSAASS*TQGSAAGGNLH
Trigger: GTGGAGATTGCCGCCAGCTGCGCTACCCTGCGTTCATGAAGAAGCAGCAGAATGGTGTGTGTGACATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp AGGAACCACTCCAAGTGCCATCTTTCCGGCAGTGAATaGTATTGCTCCCACGGCCCTGGGAGGCATCACTGT +
Preference number: 6 (lower is better)
Translates to: RNHSKCHLSGSE*YCSHGPGRHHC
Trigger: ACAGTGATGCCTCCCAGGGCCGTGGGAGCAATATCATTCACTGCCGGAAAGATGGCACTTGGAGTGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TGGAAGGAACCACTCCAAGTGCCATCTTTCCGGCAGTaGATGATATTGCTCCCACGGCCCTGGGAGGCATCA +
Preference number: 6 (lower is better)
Translates to: WKEPLQVPSFRQ*MILLPRPWEAS
Trigger: TGATGCCTCCCAGGGCCGTGGGAGCAATATCATTCACTGCCGGAAAGATGGCACTTGGAGTGGTTCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp CCATGCAGGGATCACTGCAGGACTGGATTTCTGAGATaGCACGGAAGATGTGATAGAGGCCCAGGCTATGCC +
Preference number: 6 (lower is better)
Translates to: PCRDHCRTGFLR*HGRCDRGPGYA
Trigger: GGCATAGCCTGGGCCTCTATCACATCTTCCGTGGCATCTCAGAAATCCAGTCCTGCAGTGATCCCTGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp ACTGAGATCTATCACCTTGGTTCGACACACCTGAGATaGCGCTGGCTGCCCAATGACAACCCAACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TEIYHLGSTHLR*RWLPNDNPTWA
Trigger: TGCCCAGGTTGGGTTGTCATTGGGCAGCCAGCGGCATCTCAGGTGTGTCGAACCAAGGTGATAGATCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CGCCATCACCACAGTACCCACTTCCGTGGGTGTATATaGCAGCAGGTGATGGCTCGCTCTCTTCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: RHHHSTHFRGCI*QQVMARSLHFL
Trigger: CAGGAAATGAAGAGAGCGAGCCATCACCTGCTGCCATATACACCCACGGAAGTGGGTACTGTGGTGATGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CTGGGCACTGCTGGTCTTGATGAGATACTGAAGCATTaGATGCCCACTGATCCAGGAAACCCTGGGGCGTGT +
Preference number: 6 (lower is better)
Translates to: LGTAGLDEILKH*MPTDPGNPGAC
Trigger: ACACGCCCCAGGGTTTCCTGGATCAGTGGGCATCCAATGCTTCAGTATCTCATCAAGACCAGCAGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CCCTCGGTACATGTCACTGTGATGCTTGGCCCTACCTaGCTCTTGATTAGCTCATCGTCCCGCTGTATCTGC +
Preference number: 6 (lower is better)
Translates to: PSVHVTVMLGPT*LLISSSSRCIC
Trigger: GCAGATACAGCGGGACGATGAGCTAATCAAGAGCCAGGTAGGGCCAAGCATCACAGTGACATGTACCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GGCTCCAAATTAGTGTCCAACAGGAAGCCGTGGGCATaGCTGAATTCCACCTGGGGGCTGTTGCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: GSKLVSNRKPWA*LNSTWGLLPSF
Trigger: GAAGGATGGCAACAGCCCCCAGGTGGAATTCAGCAATGCCCACGGCTTCCTGTTGGACACTAATTTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp TGTCCTGACGGTCCACAGGGCATGGGGGAGGAGGCATaGAAAGCATATTGCACCAGGATTCTCCCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: CPDGPQGMGEEA*KAYCTRILPSR
Trigger: CCTAGAAGGGAGAATCCTGGTGCAATATGCTTTCAATGCCTCCTCCCCCATGCCCTGTGGACCGTCAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GGGATACCACAGTCCACCGGCTCACATGCCACCTGCTaGTTCCATTTGCCCTCGGTACATGTCACTGTGATG +
Preference number: 6 (lower is better)
Translates to: GIPQSTGSHATC*FHLPSVHVTVM
Trigger: CATCACAGTGACATGTACCGAGGGCAAATGGAACAAGCAGGTGGCATGTGAGCCGGTGGACTGTGGTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TTCCGAGATGAGCCAGGCACGTGGTATCCAGGTTTACACTTGTACTaGCAGAAGGAGCCCACCTTGTGCTTGTTCTCTCGACACCGGGCT +
Preference number: 6 (lower is better)
Translates to: FRDEPGTWYPGLHLY*QKEPTLCLFSRHRA
Trigger: AGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TGTCTCCATGCAGGGATCACTGCAGGACTGGATTTCTaGGATGCCACGGAAGATGTGATAGAGGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: CLHAGITAGLDF*DATEDVIEAQA
Trigger: AGCCTGGGCCTCTATCACATCTTCCGTGGCATCTCAGAAATCCAGTCCTGCAGTGATCCCTGCATGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp CACTTCTGGGTCAGTGGGCTGAATATGCCACCTACTTaGTCAGCCGAAGTTGCCACCTGGGCACCATTCATA +
Preference number: 6 (lower is better)
Translates to: HFWVSGLNMPPT*SAEVATWAPFI
Trigger: TATGAATGGTGCCCAGGTGGCAACTTCGGCTGAGCAAGTAGGTGGCATATTCAGCCCACTGACCCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp ATGGTGATCTGGGATACCACAGTCCACCGGCTCACATaGCACCTGCTTGTTCCATTTGCCCTCGGTACATGT +
Preference number: 6 (lower is better)
Translates to: MVIWDTTVHRLT*HLLVPFALGTC
Trigger: ACATGTACCGAGGGCAAATGGAACAAGCAGGTGGCATGTGAGCCGGTGGACTGTGGTATCCCAGATCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp GGTTTACACTTGTACTTGCAGAAGGAGCCCACCTTGTaGTTGTTCTCTCGACACCGGGCTGTCTGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLHLYLQKEPTL*LFSRHRAVCRS
Trigger: GGACCTACAGACAGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp TTACTGTTGAGTTGGTTTGGGGCTGAGCACTGGCCTTaGATCTCTCGGCAGACGTGGAAGGAACCACTCCAA +
Preference number: 6 (lower is better)
Translates to: LLLSWFGAEHWP*ISRQTWKEPLQ
Trigger: TTGGAGTGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTCAACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CATTCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTTaGGGGCTGGGTTGGTATCATTGCAGAGGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: HSLVQGLHKTCV*GLGWYHCRGLQ
Trigger: CTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp TTGAGGTTACTGTTGAGTTGGTTTGGGGCTGAGCACTaGCCTTGCATCTCTCGGCAGACGTGGAAGGAACCA +
Preference number: 6 (lower is better)
Translates to: LRLLLSWFGAEH*PCISRQTWKEP
Trigger: TGGTTCCTTCCACGTCTGCCGAGAGATGCAAGGCCAGTGCTCAGCCCCAAACCAACTCAACAGTAACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp TTGACACAGTGGATCAGAGCAGGGTGGGGATACCACTaGAGACCAGCAGTGCAGACAATCCTCTGTACTCGT +
Preference number: 6 (lower is better)
Translates to: LTQWIRAGWGYH*RPAVQTILCTR
Trigger: ACGAGTACAGAGGATTGTCTGCACTGCTGGTCTCCAGTGGTATCCCCACCCTGCTCTGATCCACTGTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp TTCAAGACAATACCGCCCAAGTGCATTAGGGCTTCCTaGTCCCATGGCCAAGTTGCCACTCCTGCCAACTCC +
Preference number: 6 (lower is better)
Translates to: FKTIPPKCIRAS*SHGQVATPANS
Trigger: GGAGTTGGCAGGAGTGGCAACTTGGCCATGGGACAAGGAAGCCCTAATGCACTTGGGCGGTATTGTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp ACGTGGTATCCAGGTTTACACTTGTACTTGCAGAAGGAGCCCACCTaGTGCTTGTTCTCTCGACACCGGGCTGTCTGTAGGTCCGCATTG +
Preference number: 6 (lower is better)
Translates to: TWYPGLHLYLQKEPT*CLFSRHRAVCRSAL
Trigger: CAATGCGGACCTACAGACAGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp AGGGCAGGCTGGAGGAACTGTGTGTGGGTTGACAGCTaGATTTGGACTCCAGGTTCGGACACTGGATTTACA +
Preference number: 6 (lower is better)
Translates to: RAGWRNCVWVDS*IWTPGSDTGFT
Trigger: TGTAAATCCAGTGTCCGAACCTGGAGTCCAAATTCAGCTGTCAACCCACACACAGTTCCTCCAGCCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GCCCGTTTCTTGGACTTCCGAGATGAGCCAGGCACGTaGTATCCAGGTTTACACTTGTACTTGCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ARFLDFRDEPGT*YPGLHLYLQKE
Trigger: CTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAAGTCCAAGAAACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GCCATTAGTGCATTGATAGAGCCCATGGAATTTGGGTaGAGGTGGGTCACAAGTCACCGGCACACAAGTTCC +
Preference number: 6 (lower is better)
Translates to: AISALIEPMEFG*RWVTSHRHTSS
Trigger: GGAACTTGTGTGCCGGTGACTTGTGACCCACCTCCACCCAAATTCCATGGGCTCTATCAATGCACTAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GGCCTCAGCCAGCTGTTGGTGCTGAAAGTCAATCTGTaGCCAGCTCACCGTTGGATTCTCATGGTGATCATC +
Preference number: 6 (lower is better)
Translates to: GLSQLLVLKVNL*PAHRWILMVII
Trigger: GATGATCACCATGAGAATCCAACGGTGAGCTGGCAACAGATTGACTTTCAGCACCAACAGCTGGCTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp TCATTCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTaGGGGGCTGGGTTGGTATCATTGCAGAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SFPGPGSPQNLC*GAGLVSLQRSP
Trigger: TGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GTACATGTCACTGTGATGCTTGGCCCTACCTGGCTCTaGATTAGCTCATCGTCCCGCTGTATCTGCAGCACA +
Preference number: 6 (lower is better)
Translates to: VHVTVMLGPTWL*ISSSSRCICST
Trigger: TGTGCTGCAGATACAGCGGGACGATGAGCTAATCAAGAGCCAGGTAGGGCCAAGCATCACAGTGACATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GAGCCAGGCACGTGGTATCCAGGTTTACACTTGTACTaGCAGAAGGAGCCCACCTTGTGCTTGTTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: EPGTWYPGLHLY*QKEPTLCLFSR
Trigger: TCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CGAGATGAGCCAGGCACGTGGTATCCAGGTTTACACTaGTACTTGCAGAAGGAGCCCACCTTGTGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: RDEPGTWYPGLH*YLQKEPTLCLF
Trigger: GAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CTCCCACGGCCCTGGGAGGCATCACTGTCTTCACACTaGATCCTGCACTCACTATTGAACTGGAAGCCATTA +
Preference number: 6 (lower is better)
Translates to: LPRPWEASLSSH*ILHSLLNWKPL
Trigger: TAATGGCTTCCAGTTCAATAGTGAGTGCAGGATCAAGTGTGAAGACAGTGATGCCTCCCAGGGCCGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CCGGTCTGTCTTCAAGGAGAAAAAGTAGCGTGGATCTCTGTTGCCTaGATCACTGGTGGTGTGAATGCCCATGACCCATCCTCGATCACG +
Preference number: 6 (lower is better)
Translates to: PVCLQGEKVAWISVA*ITGGVNAHDPSSIT
Trigger: CGTGATCGAGGATGGGTCATGGGCATTCACACCACCAGTGATCAAGGCAACAGAGATCCACGCTACTTTTTCTCCTTGAAGACAGACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CAGCTCCCAGGAGATGTTGTAGTGTTGAAAGGCCTCAGCCAGCTGTaGGTGCTGAAAGTCAATCTGTTGCCAGCTCACCGTTGGATTCTC +
Preference number: 6 (lower is better)
Translates to: QLPGDVVVLKGLSQL*VLKVNLLPAHRWIL
Trigger: GAGAATCCAACGGTGAGCTGGCAACAGATTGACTTTCAGCACCAACAGCTGGCTGAGGCCTTTCAACACTACAACATCTCCTGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp AAAGATGGGTTCAAGACAATACCGCCCAAGTGCATTAGGGCTTCCTaGTCCCATGGCCAAGTTGCCACTCCTGCCAACTCCTCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: KDGFKTIPPKCIRAS*SHGQVATPANSSSE
Trigger: TTCAGAGGAGGAGTTGGCAGGAGTGGCAACTTGGCCATGGGACAAGGAAGCCCTAATGCACTTGGGCGGTATTGTCTTGAACCCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TATCCAGGTTTACACTTGTACTTGCAGAAGGAGCCCACCTTGTGCTaGTTCTCTCGACACCGGGCTGTCTGTAGGTCCGCATTGGGAACT +
Preference number: 6 (lower is better)
Translates to: YPGLHLYLQKEPTLC*FSRHRAVCRSALGT
Trigger: AGTTCCCAATGCGGACCTACAGACAGCCCGGTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TTGGACTTCCGAGATGAGCCAGGCACGTGGTATCCAGGTTTACACTaGTACTTGCAGAAGGAGCCCACCTTGTGCTTGTTCTCTCGACAC +
Preference number: 6 (lower is better)
Translates to: LDFRDEPGTWYPGLH*YLQKEPTLCLFSRH
Trigger: GTGTCGAGAGAACAAGCACAAGGTGGGCTCCTTCTGCAAGTACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAAGTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp GAGCACTTTACACTTCTGGGTCAGTGGGCTGAATATGCCACCTACTaGCTCAGCCGAAGTTGCCACCTGGGCACCATTCATATAGAGCTT +
Preference number: 6 (lower is better)
Translates to: EHFTLLGQWAEYATY*LSRSCHLGTIHIEL
Trigger: AAGCTCTATATGAATGGTGCCCAGGTGGCAACTTCGGCTGAGCAAGTAGGTGGCATATTCAGCCCACTGACCCAGAAGTGTAAAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CAATACCGCCCAAGTGCATTAGGGCTTCCTTGTCCCATGGCCAAGTaGCCACTCCTGCCAACTCCTCCTCTGAAGAGTTTGCAAAGAAAA +
Preference number: 6 (lower is better)
Translates to: QYRPSALGLPCPMAK*PLLPTPPLKSLQRK
Trigger: TTTTCTTTGCAAACTCTTCAGAGGAGGAGTTGGCAGGAGTGGCAACTTGGCCATGGGACAAGGAAGCCCTAATGCACTTGGGCGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TTCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTTGGGGGCTGGGTaGGTATCATTGCAGAGGTCTCCAGTTTCAAATGAAGGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: FPGPGSPQNLCLGAG*VSLQRSPVSNEGSV
Trigger: GACAGAGCCTTCATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CCAGCTCTGGTATACGAGGTCCAGGTAACAGTGCATTCTGGAGACTaGATTGGGCGTGAAAGAGTCTGTACAGTCGTCATCTGCGTAGCT +
Preference number: 6 (lower is better)
Translates to: PALVYEVQVTVHSGD*IGRERVCTVVICVA
Trigger: AGCTACGCAGATGACGACTGTACAGACTCTTTCACGCCCAATCAAGTCTCCAGAATGCACTGTTACCTGGACCTCGTATACCAGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TCACCGTTGGATTCTCATGGTGATCATCATAGATGTTaGCCACACGATAGCGGACCACCTTGGGCTGCCGAA +
Preference number: 6 (lower is better)
Translates to: SPLDSHGDHHRC*PHDSGPPWAAE
Trigger: TTCGGCAGCCCAAGGTGGTCCGCTATCGTGTGGTCAACATCTATGATGATCACCATGAGAATCCAACGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp CCTCTTGCCAGCTGCCATCTTGAGTACATTGAGTCTTaGAAGCCCGTTTCTTGGACTTCCGAGATGAGCCAG +
Preference number: 6 (lower is better)
Translates to: PLASCHLEYIES*KPVSWTSEMSQ
Trigger: CTGGCTCATCTCGGAAGTCCAAGAAACGGGCTTTCAAGACTCAATGTACTCAAGATGGCAGCTGGCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp CGGCTGGGTTCATCAATGCAGTTGAAGGAAACTTCTTaGTTGCAGAAAAGGGAGCAGCCATCCCCATTGACC +
Preference number: 6 (lower is better)
Translates to: RLGSSMQLKETS*LQKREQPSPLT
Trigger: GGTCAATGGGGATGGCTGCTCCCTTTTCTGCAAGCAAGAAGTTTCCTTCAACTGCATTGATGAACCCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CACACGATAGCGGACCACCTTGGGCTGCCGAAAACTTaGGAGCTGATTGTAACTGGAGATGACTTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: HTIADHLGLPKT*ELIVTGDDFCV
Trigger: AACACAGAAGTCATCTCCAGTTACAATCAGCTCCCAAGTTTTCGGCAGCCCAAGGTGGTCCGCTATCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GATAGAGGCCCAGGCTATGCCCAATCTCATGAATCATaGTGTGGGTGTGTCCGGGAATGCCATAGAAAGATG +
Preference number: 6 (lower is better)
Translates to: DRGPGYAQSHES*CGCVRECHRKM
Trigger: CATCTTTCTATGGCATTCCCGGACACACCCACACCATGATTCATGAGATTGGGCATAGCCTGGGCCTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GAGGTTTACACTGTAGGCAGAGTGGACTGTCTACAGTaGAGGTCAGCATTGCTGCATCAATCTCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: EVYTVGRVDCLQ*RSALLHQSPGA
Trigger: AGCACCTGGAGATTGATGCAGCAATGCTGACCTCCACTGTAGACAGTCCACTCTGCCTACAGTGTAAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp GTCAAGTTAACGGGAAGGATGATGGACTCGCTGTTATaGTCCAGGCACGAGATGGCACACTCTGACCCTATT +
Preference number: 6 (lower is better)
Translates to: VKLTGRMMDSLL*SRHEMAHSDPI
Trigger: AATAGGGTCAGAGTGTGCCATCTCGTGCCTGGACCATAACAGCGAGTCCATCATCCTTCCCGTTAACTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GGAGATGTTGTAGTGTTGAAAGGCCTCAGCCAGCTGTaGGTGCTGAAAGTCAATCTGTTGCCAGCTCACCGT +
Preference number: 6 (lower is better)
Translates to: GDVVVLKGLSQL*VLKVNLLPAHR
Trigger: ACGGTGAGCTGGCAACAGATTGACTTTCAGCACCAACAGCTGGCTGAGGCCTTTCAACACTACAACATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CCGGCTGGGTTCATCAATGCAGTTGAAGGAAACTTCTaGCTTGCAGAAAAGGGAGCAGCCATCCCCATTGAC +
Preference number: 6 (lower is better)
Translates to: PAGFINAVEGNF*LAEKGAAIPID
Trigger: GTCAATGGGGATGGCTGCTCCCTTTTCTGCAAGCAAGAAGTTTCCTTCAACTGCATTGATGAACCCAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CCACAAGTGTCATTCCCTGGTCCAGGGTCTCCACAAAACTTGTGTTaGGGGGCTGGGTTGGTATCATTGCAGAGGTCTCCAGTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: PQVSFPGPGSPQNLC*GAGLVSLQRSPVSN
Trigger: ATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGGACCAGGGAATGACACTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp CCAGGTAACAGTGCATTCTGGAGACTTGATTGGGCGTaGAAGAGTCTGTACAGTCGTCATCTGCGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: PGNSAFWRLDWA*KSLYSRHLRSS
Trigger: TGAGCTACGCAGATGACGACTGTACAGACTCTTTCACGCCCAATCAAGTCTCCAGAATGCACTGTTACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CTTCAAGGAGAAAAAGTAGCGTGGATCTCTGTTGCCTaGATCACTGGTGGTGTGAATGCCCATGACCCATCC +
Preference number: 6 (lower is better)
Translates to: LQGEKVAWISVA*ITGGVNAHDPS
Trigger: GGATGGGTCATGGGCATTCACACCACCAGTGATCAAGGCAACAGAGATCCACGCTACTTTTTCTCCTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CCTGCACTCACTATTGAACTGGAAGCCATTAGTGCATaGATAGAGCCCATGGAATTTGGGTGGAGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: PALTIELEAISA*IEPMEFGWRWV
Trigger: GACCCACCTCCACCCAAATTCCATGGGCTCTATCAATGCACTAATGGCTTCCAGTTCAATAGTGAGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CAGCATTGCTGCATCAATCTCCAGGTGCTCATCAAGAGTATAGATTaGGATGCCATATACCTCCTCACCCACATCCCGGAGTCTGATGGT +
Preference number: 6 (lower is better)
Translates to: QHCCINLQVLIKSID*DAIYLLTHIPESDG
Trigger: ACCATCAGACTCCGGGATGTGGGTGAGGAGGTATATGGCATCCAAATCTATACTCTTGATGAGCACCTGGAGATTGATGCAGCAATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp GGTGGTGTGAATGCCCATGACCCATCCTCGATCACGTaGGGTATAAGAACATTTGTCATACAGCCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: GGVNAHDPSSIT*GIRTFVIQPCD
Trigger: ATCACAGGGCTGTATGACAAATGTTCTTATACCTCACGTGATCGAGGATGGGTCATGGGCATTCACACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp CTCTGTTGCCTTGATCACTGGTGGTGTGAATGCCCATaGCCCATCCTCGATCACGTGAGGTATAAGAACATT +
Preference number: 6 (lower is better)
Translates to: LCCLDHWWCECP*PILDHVRYKNI
Trigger: AATGTTCTTATACCTCACGTGATCGAGGATGGGTCATGGGCATTCACACCACCAGTGATCAAGGCAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp GCTGCCGAAAACTTGGGAGCTGATTGTAACTGGAGATaGCTTCTGTGTTGTCACACAGTGTCTGCCCACAAA +
Preference number: 6 (lower is better)
Translates to: AAENLGADCNWR*LLCCHTVSAHK
Trigger: TTTGTGGGCAGACACTGTGTGACAACACAGAAGTCATCTCCAGTTACAATCAGCTCCCAAGTTTTCGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp ATCTTGCTGATGTCACAGTTGGCTAGGATGAGGCGGTaGCGCAGAGAGGAACTGTTTATATTCAGTACCTCC +
Preference number: 6 (lower is better)
Translates to: ILLMSQLARMRR*RREELFIFSTS
Trigger: GGAGGTACTGAATATAAACAGTTCCTCTCTGCGTCACCGCCTCATCCTAGCCAACTGTGACATCAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TGCAAGGATACCAAGCATGCTGGGAAATGCCTTCACTaGGATCTATCACCTTGGTTCGACACACCTGAGATG +
Preference number: 6 (lower is better)
Translates to: CKDTKHAGKCLH*DLSPWFDTPEM
Trigger: CATCTCAGGTGTGTCGAACCAAGGTGATAGATCTCAGTGAAGGCATTTCCCAGCATGCTTGGTATCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp TTGAGTCTTGAAAGCCCGTTTCTTGGACTTCCGAGATaGGCCAGGCACGTGGTATCCAGGTTTACACTTGTA +
Preference number: 6 (lower is better)
Translates to: LSLESPFLGLPR*ARHVVSRFTLV
Trigger: TACAAGTGTAAACCTGGATACCACGTGCCTGGCTCATCTCGGAAGTCCAAGAAACGGGCTTTCAAGACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp CAATCTCATGAATCATGGTGTGGGTGTGTCCGGGAATaGCATAGAAAGATGGGTTCAAGACAATACCGCCCA +
Preference number: 6 (lower is better)
Translates to: QSHESWCGCVRE*HRKMGSRQYRP
Trigger: TGGGCGGTATTGTCTTGAACCCATCTTTCTATGGCATTCCCGGACACACCCACACCATGATTCATGAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS GCA 72 bp TCTTCTAGCAGAGGTGGGTCTCGAAGCACTTTATACTaGAGAGGTTTACACTGTAGGCAGAGTGGACTGTCT +
Preference number: 6 (lower is better)
Translates to: SSSRGGSRSTLY*RGLHCRQSGLS
Trigger: AGACAGTCCACTCTGCCTACAGTGTAAACCTCTGCAGTATAAAGTGCTTCGAGACCCACCTCTGCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGGCCACGGGTTTCCATGTCGGATACAATCTCTCGCTaGGTTCTTGCTACTTTCCATAGACTGAAGTGTTCA +
Preference number: 6 (lower is better)
Translates to: RPRVSMSDTISR*VLATFHRLKCS
Trigger: TGAACACTTCAGTCTATGGAAAGTAGCAAGAACCCAGCGAGAGATTGTATCCGACATGGAAACCCGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGGTCACATGCTGATCCCAATTCTCTTTCAAAGAAGTaGCCATCGATGGGTGGGAACCACTCTAGCATCACA +
Preference number: 6 (lower is better)
Translates to: RSHADPNSLSKK*PSMGGNHSSIT
Trigger: TGTGATGCTAGAGTGGTTCCCACCCATCGATGGCCACTTCTTTGAAAGAGAATTGGGATCAGCATGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CCACAAAACTTGTGTTTGGGGGCTGGGTTGGTATCATaGCAGAGGTCTCCAGTTTCAAATGAAGGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: PQNLCLGAGLVS*QRSPVSNEGSV
Trigger: GACAGAGCCTTCATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CCAGGGTCTCCACAAAACTTGTGTTTGGGGGCTGGGTaGGTATCATTGCAGAGGTCTCCAGTTTCAAATGAA +
Preference number: 6 (lower is better)
Translates to: PGSPQNLCLGAG*VSLQRSPVSNE
Trigger: TTCATTTGAAACTGGAGACCTCTGCAATGATACCAACCCAGCCCCCAAACACAAGTTTTGTGGAGACCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp GTATACGAGGTCCAGGTAACAGTGCATTCTGGAGACTaGATTGGGCGTGAAAGAGTCTGTACAGTCGTCATC +
Preference number: 6 (lower is better)
Translates to: VYEVQVTVHSGD*IGRERVCTVVI
Trigger: GATGACGACTGTACAGACTCTTTCACGCCCAATCAAGTCTCCAGAATGCACTGTTACCTGGACCTCGTATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp TGCATCAATCTCCAGGTGCTCATCAAGAGTATAGATTaGGATGCCATATACCTCCTCACCCACATCCCGGAG +
Preference number: 6 (lower is better)
Translates to: CINLQVLIKSID*DAIYLLTHIPE
Trigger: CTCCGGGATGTGGGTGAGGAGGTATATGGCATCCAAATCTATACTCTTGATGAGCACCTGGAGATTGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TGGTACACACTGCCAAGTTTCAGATCCGTGTCCATGAATCTTCTGTaGAGGTGGAGTAATGAGGCTACATCTTCTAGCAGAGGTGGGTCT +
Preference number: 6 (lower is better)
Translates to: WYTLPSFRSVSMNLL*RWSNEATSSSRGGS
Trigger: AGACCCACCTCTGCTAGAAGATGTAGCCTCATTACTCCACCTCAACAGAAGATTCATGGACACGGATCTGAAACTTGGCAGTGTGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp ACACTTGATCCTGCACTCACTATTGAACTGGAAGCCATTAGTGCATaGATAGAGCCCATGGAATTTGGGTGGAGGTGGGTCACAAGTCAC +
Preference number: 6 (lower is better)
Translates to: TLDPALTIELEAISA*IEPMEFGWRWVTSH
Trigger: GTGACTTGTGACCCACCTCCACCCAAATTCCATGGGCTCTATCAATGCACTAATGGCTTCCAGTTCAATAGTGAGTGCAGGATCAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp GAAATAGCACCGGCTGGGTTCATCAATGCAGTTGAAGGAAACTTCTaGCTTGCAGAAAAGGGAGCAGCCATCCCCATTGACCTTATTCAT +
Preference number: 6 (lower is better)
Translates to: EIAPAGFINAVEGNF*LAEKGAAIPIDLIH
Trigger: ATGAATAAGGTCAATGGGGATGGCTGCTCCCTTTTCTGCAAGCAAGAAGTTTCCTTCAACTGCATTGATGAACCCAGCCGGTGCTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp ACTTCTTGCTTGCAGAAAAGGGAGCAGCCATCCCCATaGACCTTATTCATGTCGTCACATTCTTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: TSCLQKREQPSP*TLFMSSHSSPW
Trigger: CCAAGGAGAAGAATGTGACGACATGAATAAGGTCAATGGGGATGGCTGCTCCCTTTTCTGCAAGCAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp ATGGCTTTGATCTTTGGTATCAAGCAACTGCACACTGATGGTCTCTaGCTTTTGGTCCCCATAGTATGTCCCATCAGTCACCAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: MALIFGIKQLHTDGL*LLVPIVCPISHQVN
Trigger: ATTCACCTGGTGACTGATGGGACATACTATGGGGACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAAAGATCAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp CATGGCTTTGATCTTTGGTATCAAGCAACTGCACACTaGTGGTCTCTTGCTTTTGGTCCCCATAGTATGTCC +
Preference number: 6 (lower is better)
Translates to: HGFDLWYQATAH*WSLAFGPHSMS
Trigger: GGACATACTATGGGGACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAAAGATCAAAGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp CTCTCTTCATTTCCTGAAATGGTGATAATCCGGTACTaGTACACACTGCCAAGTTTCAGATCCGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: LSSFPEMVIIRY*YTLPSFRSVSM
Trigger: CATGGACACGGATCTGAAACTTGGCAGTGTGTACCAGTACCGGATTATCACCATTTCAGGAAATGAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGTCACCAGGTGAATAATTACAGCTGCAGCAACCATTaGCTGAGAGAAATATGTCTGGAGCCAGAATGTGGT +
Preference number: 6 (lower is better)
Translates to: SHQVNNYSCSNH*LREICLEPECG
Trigger: ACCACATTCTGGCTCCAGACATATTTCTCTCAGCCAATGGTTGCTGCAGCTGTAATTATTCACCTGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp ATCTTTGGTATCAAGCAACTGCACACTGATGGTCTCTaGCTTTTGGTCCCCATAGTATGTCCCATCAGTCAC +
Preference number: 6 (lower is better)
Translates to: IFGIKQLHTDGL*LLVPIVCPISH
Trigger: GTGACTGATGGGACATACTATGGGGACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp CCCAAAGAGATATTCTTTCCACTGATAGTCAAGAGTTTGATGTCATaGACAGCTCCACTAGAGTCCCAATCACTGGAGACAAAGGTTACC +
Preference number: 6 (lower is better)
Translates to: PKEIFFPLIVKSLMS*TAPLESQSLETKVT
Trigger: GGTAACCTTTGTCTCCAGTGATTGGGACTCTAGTGGAGCTGTCAATGACATCAAACTCTTGACTATCAGTGGAAAGAATATCTCTTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 90 bp TTGATCTTTGGTATCAAGCAACTGCACACTGATGGTCTCTTGCTTTaGGTCCCCATAGTATGTCCCATCAGTCACCAGGTGAATAATTAC +
Preference number: 6 (lower is better)
Translates to: LIFGIKQLHTDGLLL*VPIVCPISHQVNNY
Trigger: GTAATTATTCACCTGGTGACTGATGGGACATACTATGGGGACCAAAAGCAAGAGACCATCAGTGTGCAGTTGCTTGATACCAAAGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CCA 72 bp AGGATCAAAGCATGTCTTAGTGACATCAGTGATGTCTaGGTCACAGCACTCTCCACCATCAAAATTAAACCT +
Preference number: 6 (lower is better)
Translates to: RIKACLSDISDV*VTALSTIKIKP
Trigger: AGGTTTAATTTTGATGGTGGAGAGTGCTGTGACCCAGACATCACTGATGTCACTAAGACATGCTTTGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS CAA 72 bp CCCAAAGAGATATTCTTTCCACTGATAGTCAAGAGTTaGATGTCATTGACAGCTCCACTAGAGTCCCAATCA +
Preference number: 6 (lower is better)
Translates to: PKEIFFPLIVKS*MSLTAPLESQS
Trigger: TGATTGGGACTCTAGTGGAGCTGTCAATGACATCAAACTCTTGACTATCAGTGGAAAGAATATCTCTTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4
CDS TCA 72 bp AGTCTGATGGTAAGTGGGATATCACAGAAAACATTCTaGGGACCCAAAGAGATATTCTTTCCACTGATAGTC +
Preference number: 6 (lower is better)
Translates to: SLMVSGISQKTF*GPKEIFFPLIV
Trigger: GACTATCAGTGGAAAGAATATCTCTTTGGGTCCTCAGAATGTTTTCTGTGATATCCCACTTACCATCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084501.4