Pregenerated sensors for PAPOLG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020273Ensembl transcript IDs: ENSMUST00000020513.10, ENSMUST00000102863.3, ENSMUST00000145013.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTGTaGGCCACCATGTGGCTGCTGGGAATTGACTCAGAACTTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SDTPGEGIRSHYRWL*ATMWLLGIDSELLE Trigger: TTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR GCA 90 bp | AGGGCATCAGGTCCCATTACAGATGGCTGTGAGCCACCATGTGGCTaGTGGGAATTGACTCAGAACTTCTGGAAGAGCAGTCTTAACCTC | + |
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Preference number: 1 (lower is better) Translates to: RASGPITDGCEPPCG*WELTQNFWKSSLNL Trigger: GAGGTTAAGACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGTAATGGGACCTGATGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR CCA 90 bp | GTCATTAGGCTGACGACTGTCCCTGTCACCTATCTGTATGGCAGCTaGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACG | + |
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Preference number: 1 (lower is better) Translates to: VIRLTTVPVTYLYGS*FYFEDWLPSMHCMT Trigger: CGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCAGCTGCCATACAGATAGGTGACAGGGACAGTCGTCAGCCTAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR GCA 90 bp | TACTGGCAGGTATCCTCAGAGTGGACTCGGCAACCAGTGAGAGACTaGTACGTCATCTCAGGGTTCCAGTGTGAGAGTTCAAAAACCACT | + |
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Preference number: 1 (lower is better) Translates to: YWQVSSEWTRQPVRD*YVISGFQCESSKTT Trigger: AGTGGTTTTTGAACTCTCACACTGGAACCCTGAGATGACGTAGCAGTCTCTCACTGGTTGCCGAGTCCACTCTGAGGATACCTGCCAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR TCA 90 bp | GGGTTCCAGTGTGAGAGTTCAAAAACCACTCCTAGGTCATTAGGCTaGCGACTGTCCCTGTCACCTATCTGTATGGCAGCTGGTTCTACT | + |
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Preference number: 1 (lower is better) Translates to: GFQCESSKTTPRSLG*RLSLSPICMAAGST Trigger: AGTAGAACCAGCTGCCATACAGATAGGTGACAGGGACAGTCGTCAGCCTAATGACCTAGGAGTGGTTTTTGAACTCTCACACTGGAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CCA 90 bp | GCATCAGGTCCCATTACAGATGGCTGTGAGCCACCATGTGGCTGCTaGGAATTGACTCAGAACTTCTGGAAGAGCAGTCTTAACCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASGPITDGCEPPCGC*ELTQNFWKSSLNLL Trigger: TAAGAGGTTAAGACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGTAATGGGACCTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR GCA 90 bp | GAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATATaGAATAGTGTCTGCGTTTTGTGGCTGATTATGGGATGGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: ERAISGSFHQNLAGI*NSVCVLWLIMGWIP Trigger: GGGGATCCATCCCATAATCAGCCACAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR TCA 90 bp | CCTTTGTCACAAGTCTTCTTAACTCATTTTCTCTTTTCTAGACTTTaGGGAATGCCCACTGAGAACTATAAGCTATTTGTCATTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PLSQVFLTHFLFSRL*GMPTENYKLFVICS Trigger: ACTGCAAATGACAAATAGCTTATAGTTCTCAGTGGGCATTCCTCAAAGTCTAGAAAAGAGAAAATGAGTTAAGAAGACTTGTGACAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR GCA 90 bp | GGCATATGCAATAGTGTCTGCGTTTTGTGGCTGATTATGGGATGGATCCCCGGGCCTAATGAACCACATTaGCTGTCTCTCAGAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: GICNSVCVLWLIMGWIPGPNEPH*LSLRTR Trigger: CCTTGTTCTGAGAGACAGGCAATGTGGTTCATTAGG...CCCGGGGATCCATCCCATAATCAGCCACAAAACGCAGACACTATTGCATATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTGTGAGTTGACTCAGAACTTCTaGAAGAGCAGTCTTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: CLQTHQERASGPITDGCELTQNF*KSSLNL Trigger: GAGGTTAAGACTGCTCTTCCAGAAGTTCTGAGTCAA...CTCACAGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGCTACGTCATCTCAGGGTTCCAGTGTGAGAGTTCAAAAACCACTCCTATTCTACTTTGAAGACTaGCTGCCATCGATGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: ETATSSQGSSVRVQKPLLFYFED*LPSMHC Trigger: GCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAA...TAGGAGTGGTTTTTGAACTCTCACACTGGAACCCTGAGATGACGTAGCAGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAACTCAGGGTTCCAGTGTaGGAGTTCAAAAACCACTCC | + |
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Preference number: 2 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQLRVPV*EFKNHS Trigger: GGAGTGGTTTTTGAACTCTCACACTGGAACCCTGAG...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR-3UTR GCA 90 bp | TGGCACAGCCTCACAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCCTAGACTTTGAGGAATaGCCACTGAGAACTATAAGC | + |
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Preference number: 2 (lower is better) Translates to: WHSLTRESYIRVLSPKSCLDFEE*PLRTIS Trigger: GCTTATAGTTCTCAGTGGGCATTCCTCAAAGTCTAG...GCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTGTGAGGCTGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATGGGGTAGTCTCTGGATaGTCCATCCTTTGTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: QERAISGSFHQNLAGICNGVVSG*SILCHK Trigger: CTTGTGACAAAGGATGGACCATCCAGAGACTACCCC...ATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAGGACTCGGCAACCAGTaGGAGACTGCTACGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: ASFTKHGVNRLQELHGCGGLGNQ*ETATSS Trigger: AGATGACGTAGCAGTCTCTCACTGGTTGCCGAGTCC...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGATGCATGCCTAATCCATaGAGAAACTGTTGGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: ASFTKHGVNRLQELHGCGCMPNP*RNCWRL Trigger: CAGTCGCCAACAGTTTCTTCATGGATTAGGCATGCA...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR-3UTR TCA 90 bp | TATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGCCCAAGGAACCACATTaGTACGTAATTGTTGCTATA | + |
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Preference number: 2 (lower is better) Translates to: YLHLHPKQMKLSYSHSPMPKEPH*YVIVAI Trigger: TATAGCAACAATTACGTATCAATGTGGTTCCTTGGG...CATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCACAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATAAGCTATTTGTCATTTaGAGTCCTAATGAACCACAT | + |
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Preference number: 2 (lower is better) Translates to: SLTRESYIRVLSPKSCWHKLFVI*SPNEPH Trigger: ATGTGGTTCATTAGGACTGCAAATGACAAATAGCTT...ATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTGTGAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGACTGCTTATTTCTGCATaGCTAATCCATGAAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: ASFTKHGVNRLQELHGCGLLISA*LIHEET Trigger: AGTTTCTTCATGGATTAGGCATGCAGAAATAAGCAG...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR TCA 72 bp | ACTGGCAGGTATCCTCAGAGTGGACTCGGCAACCAGTaGGAGACTGCTACGTCATCTCAGGGTTCCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: TGRYPQSGLGNQ*ETATSSQGSSV Trigger: CACACTGGAACCCTGAGATGACGTAGCAGTCTCTCACTGGTTGCCGAGTCCACTCTGAGGATACCTGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR TCA 72 bp | CCCTGTCACCTATCTGTATGGCAGCTGGTTCTACTTTaGAGACTGGCTGCCATCGATGCACTGCATGACGCA | + |
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Preference number: 3 (lower is better) Translates to: PCHLSVWQLVLL*RLAAIDALHDA Trigger: TGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCAGCTGCCATACAGATAGGTGACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR GCA 72 bp | GGTCCCATTACAGATGGCTGTGAGCCACCATGTGGCTaGTGGGAATTGACTCAGAACTTCTGGAAGAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GPITDGCEPPCG*WELTQNFWKSS Trigger: ACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGTAATGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR CCA 72 bp | CTGACGACTGTCCCTGTCACCTATCTGTATGGCAGCTaGTTCTACTTTGAAGACTGGCTGCCATCGATGCAC | + |
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Preference number: 3 (lower is better) Translates to: LTTVPVTYLYGS*FYFEDWLPSMH Trigger: GTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCAGCTGCCATACAGATAGGTGACAGGGACAGTCGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CCA 72 bp | TGCGTTTTGTGGCTGATTATGGGATGGATCCCCGGGTaGGGTAGTCTCTGGATGGTCCATCCTTTGTCACAA | + |
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Preference number: 3 (lower is better) Translates to: CVLWLIMGWIPG*GSLWMVHPLSQ Trigger: TTGTGACAAAGGATGGACCATCCAGAGACTACCCCACCCGGGGATCCATCCCATAATCAGCCACAAAACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR TCA 72 bp | CAGATGGCTGTGAGCCACCATGTGGCTGCTGGGAATTaGCTCAGAACTTCTGGAAGAGCAGTCTTAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMAVSHHVAAGN*LRTSGRAVLTS Trigger: AGAGGTTAAGACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR GCA 72 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTaGATGACGCATGCTCACCTAAGTGAAGAGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: WFYFEDWLPSMH*MTHAHLSEEAL Trigger: CAGTGCCTCTTCACTTAGGTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CCA 72 bp | ACCTATCTGTATGGCAGCTGGTTCTACTTTGAAGACTaGCTGCCATCGATGCACTGCATGACGCATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: TYLYGSWFYFED*LPSMHCMTHAH Trigger: GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCAGCTGCCATACAGATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGCTGTGAGCCACCATGTGGCTGCTaGGAATTGACTCAGAACTTCTGGAAGAGCAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELTQNFWKSSL Trigger: AAGACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGTAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR CCA 72 bp | CTGATTATGGGATGGATCCCCGGGTGGGGTAGTCTCTaGATGGTCCATCCTTTGTCACAAGTCTTCTTAACT | + |
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Preference number: 3 (lower is better) Translates to: LIMGWIPGWGSL*MVHPLSQVFLT Trigger: AGTTAAGAAGACTTGTGACAAAGGATGGACCATCCAGAGACTACCCCACCCGGGGATCCATCCCATAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR TCA 72 bp | TGTGAGAGTTCAAAAACCACTCCTAGGTCATTAGGCTaGCGACTGTCCCTGTCACCTATCTGTATGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: CESSKTTPRSLG*RLSLSPICMAA Trigger: AGCTGCCATACAGATAGGTGACAGGGACAGTCGTCAGCCTAATGACCTAGGAGTGGTTTTTGAACTCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CCA 72 bp | AAAATGCAAAGCCATAACACTGTAGGTGACATTTACTaGCAGGTATCCTCAGAGTGGACTCGGCAACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KMQSHNTVGDIY*QVSSEWTRQPV Trigger: CACTGGTTGCCGAGTCCACTCTGAGGATACCTGCCAGTAAATGTCACCTACAGTGTTATGGCTTTGCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGGCTAAGGGGCCTCTCTTTCCACTaGTGGCCGACTAGACCATCTTCTGATACATATACA | + |
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Preference number: 3 (lower is better) Translates to: IKFARLRGLSFH*WPTRPSSDTYT Trigger: TGTATATGTATCAGAAGATGGTCTAGTCGGCCATCAGTGGAAAGAGAGGCCCCTTAGCCTTGCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| 3UTR-3UTR CAA 90 bp | CATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGATTGCATCCCAAGGAACCACATaGATACGTAATTGTTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: HLHPKQMKLSYSHSPMIASQGTT*IRNCCY Trigger: ATAGCAACAATTACGTATCAATGTGGTTCCTTGGGA...TGCAATCATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
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| 3UTR-3UTR CAA 90 bp | GAATGCCCACTGAGAACTATAAGCTATTTGTCATTTGCAGTCCTAATGAACCACTCTGATCCTAGGTTTTaGTTTCTTTTCAACAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: ECPLRTISYLSFAVLMNHSDPRF*FLFNRV Trigger: AACCCTGTTGAAAAGAAACAAAAACCTAGGATCAGA...GTGGTTCATTAGGACTGCAAATGACAAATAGCTTATAGTTCTCAGTGGGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | CCAATAGATGACTGTGAGCATCCACTTCTGTATTCGCCAGGCACTGGCACAGCCGGACAGCCCCTGAGCTaGGGGGACACTTGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PIDDCEHPLLYSPGTGTAGQPLS*GDTWQL Trigger: AAGCTGCCAAGTGTCCCCCCAGCTCAGGGGCTGTCC...GGCTGTGCCAGTGCCTGGCGAATACAGAAGTGGATGCTCACAGTCATCTATTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTGTGAGCCCTGGACAGGGTTGTaGGGTGTTGTGATTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: CLQTHQERASGPITDGCEPWTGL*GVVILG Trigger: TCCTAGAATCACAACACCCCACAACCCTGTCCAGGG...CTCACAGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACTCCTGTGGGGCTGTCTaGGTTGGAAGGCTTATTTGC | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHSCGAV*VGRLIC Trigger: GCAAATAAGCCTTCCAACCCAGACAGCCCCACAGGA...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | GTAGCTGTCTTCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTAGTCCCATCTGTAGGTaGCGAATGGGATCTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VAVFRHTRRGHQVPLQMASPICR*RMGSFG Trigger: CCCAAAAGATCCCATTCGCCACCTACAGATGGGACT...AGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGAAGACAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACCCAGAGATGATCTTTTaGACTGAAGGCCCCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHPEMIF*TEGPLN Trigger: GTTCAGGGGGCCTTCAGTCCAAAAGATCATCTCTGG...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | GGCATATGCAATAGTGTCTGCGTTTTGTGGCTGATTATGGGATGGATCCCCGGGCCAGAGATGATCTTTTaGACTGAAGGCCCCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GICNSVCVLWLIMGWIPGPEMIF*TEGPLN Trigger: GTTCAGGGGGCCTTCAGTCCAAAAGATCATCTCTGG...CCCGGGGATCCATCCCATAATCAGCCACAAAACGCAGACACTATTGCATATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACAGTCCCATCTGTAGGTaGCGAATGGGATCTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHSPICR*RMGSFG Trigger: CCCAAAAGATCCCATTCGCCACCTACAGATGGGACT...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CAA 72 bp | ACAGATGGCTGTGAGCCACCATGTGGCTGCTGGGAATaGACTCAGAACTTCTGGAAGAGCAGTCTTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*TQNFWKSSLNL Trigger: GAGGTTAAGACTGCTCTTCCAGAAGTTCTGAGTCAATTCCCAGCAGCCACATGGTGGCTCACAGCCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATAGTGTCTGCGTTTTGGATGATCTTTTGGACTaGAGGCCCCCTGAACTCCGA | + |
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Preference number: 4 (lower is better) Translates to: SGSFHQNLAGICNSVCVLDDLLD*RPPELR Trigger: TCGGAGTTCAGGGGGCCTTCAGTCCAAAAGATCATC...CAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACCAGGCAAGTTCAAGTTaGTTTCTTCTGGTTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHQASSS*FLLVAS Trigger: TGAAGCAACCAGAAGAAAGCAACTTGAACTTGCCTG...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACAGAACAACCAGCCTGTaGTTCAATTCTTCCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHRTTSL*FNSSSS Trigger: AGATGAGGAAGAATTGAACCACAGGCTGGTTGTTCT...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACCAACAGCACAGGATTTaGCCATTCCCATTTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHQQHRI*PFPFGK Trigger: TTTTCCAAATGGGAATGGCCAAATCCTGTGCTGTTG...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAGGACAGCCCCTGAGCTaGGGGGACACTTGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGGQPLS*GDTWQL Trigger: AAGCTGCCAAGTGTCCCCCCAGCTCAGGGGCTGTCC...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | TGTCTTCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTGTGAGACCAATCGAATCCATTaGTTTTCTTTTCCGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQTHQERASGPITDGCETNRIH*FSFPIL Trigger: GAGGATCGGAAAAGAAAACCAATGGATTCGATTGGT...CTCACAGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCAGACACACCAGGAGAGGGCATCAGGTCCCATTACAGATGGCTGTGAGTGCCGTATCAATAGTTaGAATAGGCATAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLQTHQERASGPITDGCECRINS*NRHRFS Trigger: GGAGAATCTATGCCTATTCCAACTATTGATACGGCA...CTCACAGCCATCTGTAATGGGACCTGATGCCCTCTCCTGGTGTGTCTGAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACCTCCAAATGGCTTCATaGCATCAATTAACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHLQMAS*HQLTSV Trigger: CACAGAAGTTAATTGATGCCATGAAGCCATTTGGAG...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | GAGACTGCTACGTCATCTCAGGGTTCCAGTGTGAGAGTTCAAAAACCACTCCTATCTCTCTACATGTCTTaGGGCAACACAAAGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ETATSSQGSSVRVQKPLLSLYMS*GNTKCI Trigger: GATGCACTTTGTGTTGCCCCAAGACATGTAGAGAGA...TAGGAGTGGTTTTTGAACTCTCACACTGGAACCCTGAGATGACGTAGCAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATAGTGTCTGCGTTTTGCACTGTCAGTGTCTCTaGAGCTATCCAGACAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFHQNLAGICNSVCVLHCQCL*SYPDKC Trigger: GCACTTGTCTGGATAGCTCCAGAGACACTGACAGTG...CAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCATTTGCAGTCCTAATGAACCACATTGCCTGTCTCTCAGAACAAGGACATTCCTGTGGGGCTGTCTaGGTTGGAAGGCTTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFAVLMNHIACLSEQGHSCGAV*VGRLIC Trigger: GCAAATAAGCCTTCCAACCCAGACAGCCCCACAGGA...ATGTCCTTGTTCTGAGAGACAGGCAATGTGGTTCATTAGGACTGCAAATGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATCTTTGCACCAATGACTaGAATGGACAGCCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QERAISGSFHQNLAGICNLCTND*NGQPLS Trigger: GCTCAGGGGCTGTCCATTCCAGTCATTGGTGCAAAG...ATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACTGCCGTATCAATAGTTaGAATAGGCATAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHCRINS*NRHRFS Trigger: GGAGAATCTATGCCTATTCCAACTATTGATACGGCA...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | GAGACTGCTACGTCATCTCAGGGTTCCAGTGTGAGAGTTCAAAAACCACTCCTACCAACCCATTCTAGATaGTTCTCTTCTGTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETATSSQGSSVRVQKPLLPTHSR*FSSVDA Trigger: TGCATCAACAGAAGAGAACCATCTAGAATGGGTTGG...TAGGAGTGGTTTTTGAACTCTCACACTGGAACCCTGAGATGACGTAGCAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| 3UTR CAA 72 bp | TACTGGTTAGTTCATACTGTTGTTCCACCTACAGGGTaGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVHTVVPPTG*QIPSAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCAACCCTGTAGGTGGAACAACAGTATGAACTAACCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCACAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATGTTGGAAGGCTTATTTaGAGACACCGGAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTRESYIRVLSPKSCWHVGRLI*RHRRVK Trigger: TTTAACTCTCCGGTGTCTGCAAATAAGCCTTCCAAC...ATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTGTGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAACCCTGGACAGGGTTGTaGGGTGTTGTGATTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQPWTGL*GVVILG Trigger: TCCTAGAATCACAACACCCCACAACCCTGTCCAGGG...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| 3UTR CAA 72 bp | AAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTaGCTGGCATATGCAATAGTGTCTGCGTTTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRELYQGPFTKI*LAYAIVSAFCG Trigger: GCCACAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAATGGTTCTCTTCTGTTaGTGCACTGGCAGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITMVLFC*CTGSQY Trigger: GTACTGACTGCCAGTGCATCAACAGAAGAGAACCAT...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR TCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAGATGATCTTTTGGACTaGAGGCCCCCTGAACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGDDLLD*RPPELR Trigger: TCGGAGTTCAGGGGGCCTTCAGTCCAAAAGATCATC...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR GCA 90 bp | GACTATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGTGGGGCAACACAAAGTaGATCAATATCAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DYLHLHPKQMKLSYSHSPWGNTK*INISSF Trigger: AAAGGAGCTGATATTGATGCACTTTGTGTTGCCCCA...CGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGCTAGACTTAAACTTGAAGCAATCCTCCTGCCTCGGTCTTCTAAATACAGCTATCCAGACAAGTaGTATCCAGAGATGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQARLKLEAILLPRSSKYSYPDK*YPEMIF Trigger: AAAGATCATCTCTGGATAGCACTTGTCTGGATAGCT...GTATTTAGAAGACCGAGGCAGGAGGATTGCTTCAAGTTTAAGTCTAGCCTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAAGGAATCCCAGCATATTaGAATAAATACCACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQGIPAY*NKYHGA Trigger: AGCGCCGTGGTATTTATTCCAATATGCTGGGATTCC...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | GACTATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGCAACAGCACAGGATTTaGCCATTCCCATTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DYLHLHPKQMKLSYSHSPQQHRI*PFPFGK Trigger: TTTTCCAAATGGGAATGGCCAAATCCTGTGCTGTTG...CGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | CATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGATTGCACAAGTTGCTTTCTTCTaGTTGCTTCAACAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHPKQMKLSYSHSPMIAQVAFF*LLQQHR Trigger: CCTGTGCTGTTGAAGCAACCAGAAGAAAGCAACTTG...TGCAATCATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
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| CDS-3UTR CCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAACACTGTCAGTGTCTCTaGAGCTATCCAGACAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQHCQCL*SYPDKC Trigger: GCACTTGTCTGGATAGCTCCAGAGACACTGACAGTG...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACATTTCTATTTCTCCTGTaGGGCTGTCTGGGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITFLFLL*GCLGWK Trigger: CTTCCAACCCAGACAGCCCCACAGGAGAAATAGAAA...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTAAACTTGAAGCAATCCTCCTGCCTCGGTCTTCTAAATACTTGGATTTTTCTATTTCTCCTGTaGGGCTGTCTGGGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLNLKQSSCLGLLNTWIFLFLL*GCLGWK Trigger: CTTCCAACCCAGACAGCCCCACAGGAGAAATAGAAA...AATCCAAGTATTTAGAAGACCGAGGCAGGAGGATTGCTTCAAGTTTAAGTCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGACTTTGCACCAATGACTaGAATGGACAGCCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGLCTND*NGQPLS Trigger: GCTCAGGGGCTGTCCATTCCAGTCATTGGTGCAAAG...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACACTGGGAGTTCTTTACTaGGTAGTCTCTTTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITLGVLY*VVSFCV Trigger: CACGCAAAAAGAGACTACCCAGTAAAGAACTCCCAG...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| 3UTR CAA 72 bp | GACTTTGAGGAATGCCCACTGAGAACTATAAGCTATTaGTCATTTGCAGTCCTAATGAACCACATTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DFEECPLRTISY*SFAVLMNHIAC Trigger: ACAGGCAATGTGGTTCATTAGGACTGCAAATGACAAATAGCTTATAGTTCTCAGTGGGCATTCCTCAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR TCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCATGGTTCTCTTCTGTTaGTGCACTGGCAGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCMVLFC*CTGSQY Trigger: GTACTGACTGCCAGTGCATCAACAGAAGAGAACCAT...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
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| CDS-3UTR GCA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAAAGCTATCCAGACAAGTaGTATCCAGAGATGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQSYPDK*YPEMIF Trigger: AAAGATCATCTCTGGATAGCACTTGTCTGGATAGCT...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR GCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGTTGGAAGGCTTATTTaGAGACACCGGAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITVGRLI*RHRRVK Trigger: TTTAACTCTCCGGTGTCTGCAAATAAGCCTTCCAAC...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR CCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAAGCCACAACAGAAGGTaGGAGATTCTTACTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITSHNRR*EILTFT Trigger: AGTGAAAGTAAGAATCTCCCACCTTCTGTTGTGGCT...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR GCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAATGGGGCAACACAAAGTaGATCAATATCAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQWGNTK*INISSF Trigger: AAAGGAGCTGATATTGATGCACTTTGTGTTGCCCCA...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATAGTGTCTGCGTTTTGTATTACCTTTTTGCGTaGCGTATCAATAGTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSFHQNLAGICNSVCVLYYLFA*RINSWN Trigger: ATTCCAACTATTGATACGGCACGCAAAAAGGTAATA...CAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS-3UTR CCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCGGAATCCCAGCATATTaGAATAAATACCACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCGIPAY*NKYHGA Trigger: AGCGCCGTGGTATTTATTCCAATATGCTGGGATTCC...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGACAAGTTGCTTTCTTCTaGTTGCTTCAACAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGQVAFF*LLQQHR Trigger: CCTGTGCTGTTGAAGCAACCAGAAGAAAGCAACTTG...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGTGGCTCTAATAGTTTaGACCAATCTGATTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRTCFYQSPSDQELVPITVALIV*TNLISL Trigger: AAGGGAAATCAGATTGGTCCAAACTATTAGAGCCAC...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
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| CDS-3UTR GCA 90 bp | TATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGAATTTCTTTAGGACATaGCAAACTAATTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLHLHPKQMKLSYSHSPMNFFRT*QTNWRG Trigger: ACCTCTCCAATTAGTTTGGCATGTCCTAAAGAAATT...CATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAAACATGCCAAACTAATTaGAGAGGTAATTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQTCQTN*RGNSIM Trigger: CATTATGGAATTACCTCTCCAATTAGTTTGGCATGT...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | CATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGATTGCAACATGCCAAACTAATTaGAGAGGTAATTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: HLHPKQMKLSYSHSPMIATCQTN*RGNSIM Trigger: CATTATGGAATTACCTCTCCAATTAGTTTGGCATGT...TGCAATCATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCAGCCACAACAGAAGGTaGGAGATTCTTACTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCSHNRR*EILTFT Trigger: AGTGAAAGTAAGAATCTCCCACCTTCTGTTGTGGCT...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | GATTGCAAAGTCTTACCTGTATCAGTAAATGACTGGATATCATATGTCAAGTCTTCTCTCTACATGTCTTaGGGCAACACAAAGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DCKVLPVSVNDWISYVKSSLYMS*GNTKCI Trigger: GATGCACTTTGTGTTGCCCCAAGACATGTAGAGAGA...AGACTTGACATATGATATCCAGTCATTTACTGATACAGGTAAGACTTTGCAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAATGTAGAATTCTGTTGTaGGTAGGCAGGGGTAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQCRILL*VGRGNY Trigger: ATAATTACCCCTGCCTACCCACAACAGAATTCTACA...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCCCAACCCATTCTAGATaGTTCTCTTCTGTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCPTHSR*FSSVDA Trigger: TGCATCAACAGAAGAGAACCATCTAGAATGGGTTGG...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR TCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAACTGACTCAAGTCGAATaGACTTTTCTATGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQLTQVE*TFLCLS Trigger: TGAAAGACATAGAAAAGTTCATTCGACTTGAGTCAG...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCCTCCAAATGGCTTCATaGCATCAATTAACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCLQMAS*HQLTSV Trigger: CACAGAAGTTAATTGATGCCATGAAGCCATTTGGAG...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCTGTAGAATTCTGTTGTaGGTAGGCAGGGGTAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCCRILL*VGRGNY Trigger: ATAATTACCCCTGCCTACCCACAACAGAATTCTACA...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAACCAATCGAATCCATTaGTTTTCTTTTCCGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGTNRIH*FSFPIL Trigger: GAGGATCGGAAAAGAAAACCAATGGATTCGATTGGT...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR GCA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAATTTATATTGTTTGCCTaGCTGTACACTGTATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FYQSPSDQELVPITEKQQFILFA*LYTVSV Trigger: TACTGATACAGTGTACAGGCAGGCAAACAATATAAA...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CCA 90 bp | GATTGCAAAGTCTTACCTGTATCAGTAAATGACTGGATATCATATGTCAAGTCTGTGGCTCTAATAGTTTaGACCAATCTGATTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DCKVLPVSVNDWISYVKSVALIV*TNLISL Trigger: AAGGGAAATCAGATTGGTCCAAACTATTAGAGCCAC...AGACTTGACATATGATATCCAGTCATTTACTGATACAGGTAAGACTTTGCAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR GCA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAAATTTCTTTAGGACATaGCAAACTAATTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFTKHGVNRLQELHGCGNFFRT*QTNWRG Trigger: ACCTCTCCAATTAGTTTGGCATGTCCTAAAGAAATT...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACGTGGGGCTGTCTGGGTaGGAAGGCTTATTTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHVGLSG*EGLFAD Trigger: GTCTGCAAATAAGCCTTCCAACCCAGACAGCCCCAC...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS GCA 90 bp | CCTTTCTATTTCTCCTGTGGGGCTGTCTGGGTTGGAAGGCTTATTTaGAGACACCGGAGAGTTAAAAGGTGTTCCACTGTCAGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFYFSCGAVWVGRLI*RHRRVKRCSTVSVS Trigger: AGAGACACTGACAGTGGAACACCTTTTAACTCTCCGGTGTCTGCAAATAAGCCTTCCAACCCAGACAGCCCCACAGGAGAAATAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACATATGTAGAATTCTGTaGTGGGTAGGCAGGGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHICRIL*WVGRGN Trigger: ATTACCCCTGCCTACCCACAACAGAATTCTACATAT...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATGTGGGGCTGTCTGGGTaGGAAGGCTTATTTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QERAISGSFHQNLAGICNVGLSG*EGLFAD Trigger: GTCTGCAAATAAGCCTTCCAACCCAGACAGCCCCAC...ATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTCCTTTCACCAAAATCTTGCTGGCATATGCAATAGTGTCTGCGTTTTGTGTCCCTGGACAGGGTaGTGGGGTGTTGTGATTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SGSFHQNLAGICNSVCVLCPWTG*WGVVIL Trigger: TAGAATCACAACACCCCACAACCCTGTCCAGGGACA...CAAAACGCAGACACTATTGCATATGCCAGCAAGATTTTGGTGAAAGGACCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTCTACTTTGAAGACTGGCTGCCATCGATGCACTGCATGACGCATGCTCACCTGATATGGTTTGTATaGCCAGTCTTGCAAAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: WFYFEDWLPSMHCMTHAHLIWFV*PVLQRL Trigger: TAGTCTTTGCAAGACTGGCAATACAAACCATATCAG...GTGAGCATGCGTCATGCAGTGCATCGATGGCAGCCAGTCTTCAAAGTAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAATGTCCCTGGACAGGGTaGTGGGGTGTTGTGATTCTA | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQCPWTG*WGVVIL Trigger: TAGAATCACAACACCCCACAACCCTGTCCAGGGACA...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS CCA 90 bp | ATCAATAGTTGGAATAGGCATAGATTCTCCACCAATCGAATCCATTaGTTTTCTTTTCCGATCCTCGGCAGCCCGGGACTCCTTAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: INSWNRHRFSTNRIH*FSFPILGSPGLLKC Trigger: GCATTTAAGGAGTCCCGGGCTGCCGAGGATCGGAAAAGAAAACCAATGGATTCGATTGGTGGAGAATCTATGCCTATTCCAACTATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | GACTATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGTTGAAGCTGCTGCATTaGGGTACAGTTGGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DYLHLHPKQMKLSYSHSPLKLLH*GTVGKF Trigger: GAACTTGCCAACTGTACCCAAATGCAGCAGCTTCAA...CGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | GAGACTGCTACGTCATCTCAGGGTTCCAGTGTGAGAGTTCAAAAACCACTCCTATCCCAAGGAACCACATaGATACGTAATTGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETATSSQGSSVRVQKPLLSQGTT*IRNCWL Trigger: AAGCCAACAATTACGTATCAATGTGGTTCCTTGGGA...TAGGAGTGGTTTTTGAACTCTCACACTGGAACCCTGAGATGACGTAGCAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TGGCACAGCCTCACAAGAGAGAGCTATATCAGGGTCCTTTCACCAAAATCTTGCGGCGAATGGGATCTTTaGGGTGTAACATTCTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WHSLTRESYIRVLSPKSCGEWDL*GVTFLV Trigger: TACTAAGAATGTTACACCCAAAAGATCCCATTCGCC...GCAAGATTTTGGTGAAAGGACCCTGATATAGCTCTCTCTTGTGAGGCTGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAACGCTTTGCCCATAATTaGACTGCTCTTAGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQRFAHN*TALRVS Trigger: ACTCACCCTAAGAGCAGTCAAATTATGGGCAAAGCG...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | CATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGATTGCACGCTTTGCCCATAATTaGACTGCTCTTAGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLHPKQMKLSYSHSPMIARFAHN*TALRVS Trigger: ACTCACCCTAAGAGCAGTCAAATTATGGGCAAAGCG...TGCAATCATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAATTGAAGCTGCTGCATTaGGGTACAGTTGGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQLKLLH*GTVGKF Trigger: GAACTTGCCAACTGTACCCAAATGCAGCAGCTTCAA...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | GACTATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGACAGGCAAGTTCAAGTaGCTTTCTTCTGGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DYLHLHPKQMKLSYSHSPTGKFK*LSSGCF Trigger: GAAGCAACCAGAAGAAAGCAACTTGAACTTGCCTGT...CGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAAATCTCTCTACATGTCTaGGGGCAACACAAAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQISLHV*GQHKVH Trigger: ATGCACTTTGTGTTGCCCCAAGACATGTAGAGAGAT...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAATCAACAGCACAGGATTaGGCCATTCCCATTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQSTAQD*AIPIWK Trigger: TTTCCAAATGGGAATGGCCAAATCCTGTGCTGTTGA...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGTCAACAGCACAGGATTaGGCCATTCCCATTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLHLHPKQMKLSYSHSPMSTAQD*AIPIWK Trigger: TTTCCAAATGGGAATGGCCAAATCCTGTGCTGTTGA...CATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGATGCATTTTGAAGGCCTCCATGGGAGGCAAAACATTTATGGTGCCCAAGGTGGCTCTAATAGTTaGGACCAATCTGATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IKMHFEGLHGRQNIYGAQGGSNS*DQSDFP Trigger: AGGGAAATCAGATTGGTCCAAACTATTAGAGCCACC...TTGGGCACCATAAATGTTTTGCCTCCCATGGAGGCCTTCAAAATGCATCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TATCTCCATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGGGTGGCTCTAATAGTTaGGACCAATCTGATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLHLHPKQMKLSYSHSPMGGSNS*DQSDFP Trigger: AGGGAAATCAGATTGGTCCAAACTATTAGAGCCACC...CATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS CCA 90 bp | ATATTTGATATCCCATTTAGATGTGGTTGTCCCTGGACAGGGTTGTaGGGTGTTGTGATTCTAGGAATAACATTCCGTCCTACTACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IFDIPFRCGCPWTGL*GVVILGITFRPTTV Trigger: TACTGTAGTAGGACGGAATGTTATTCCTAGAATCACAACACCCCACAACCCTGTCCAGGGACAACCACATCTAAATGGGATATCAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | CATCTACACCCTAAACAGATGAAACTGAGTTACAGTCATAGCCCGATGATTGCAACTTGTGAACTAAAGTaGAAGCTGCTGCATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLHPKQMKLSYSHSPMIATCELK*KLLHLG Trigger: ACCCAAATGCAGCAGCTTCAACTTTAGTTCACAAGT...TGCAATCATCGGGCTATGACTGTAACTCAGTTTCATCTGTTTAGGGTGTAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGGACTTGTTTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACATTGATGACACGGATGTaGTTTGCTGGAACTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FRTCFYQSPSDQELVPITLMTRM*FAGTGD Trigger: ATCTCCAGTTCCAGCAAACAACATCCGTGTCATCAA...TGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAAACAAGTCCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGATCAATATCAGCTCCTTaGGTGTGTACTCCAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFTKHGVNRLQELHGCGSISAP*VCTPSL Trigger: CAGGCTTGGAGTACACACCAAAGGAGCTGATATTGA...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAAACAGGCAAGTTCAAGTaGCTTTCTTCTGGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYQSPSDQELVPITEKQQTGKFK*LSSGCF Trigger: GAAGCAACCAGAAGAAAGCAACTTGAACTTGCCTGT...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAAGTCTTACCTGTATCAGTAAATGACTGGATATCATATGTCAAGTCTTCAATATCAGCTCCTTaGGTGTGTACTCCAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DCKVLPVSVNDWISYVKSSISAP*VCTPSL Trigger: CAGGCTTGGAGTACACACCAAAGGAGCTGATATTGA...AGACTTGACATATGATATCCAGTCATTTACTGATACAGGTAAGACTTTGCAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAAACTTGTGAACTAAAGTaGAAGCTGCTGCATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FYQSPSDQELVPITEKQQTCELK*KLLHLG Trigger: ACCCAAATGCAGCAGCTTCAACTTTAGTTCACAAGT...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAAGGCGAATGGGATCTTTaGGGTGTAACATTCTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FYQSPSDQELVPITEKQQGEWDL*GVTFLV Trigger: TACTAAGAATGTTACACCCAAAAGATCCCATTCGCC...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | GCTTCATTTACAAAACACGGAGTCAACAGATTACAAGAATTACATGGTTGTGGAAGGCGGATCGAGTTTTaGATGACACGGATGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFTKHGVNRLQELHGCGRRIEF*MTRMLF Trigger: AAACAACATCCGTGTCATCAAAAACTCGATCCGCCT...TCCACAACCATGTAATTCTTGTAATCTGTTGACTCCGTGTTTTGTAAATGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAAGTCTTACCTGTATCAGTAAATGACTGGATATCATATGTCAAGTCTATCTCTCTACATGTCTaGGGGCAACACAAAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DCKVLPVSVNDWISYVKSISLHV*GQHKVH Trigger: ATGCACTTTGTGTTGCCCCAAGACATGTAGAGAGAT...AGACTTGACATATGATATCCAGTCATTTACTGATACAGGTAAGACTTTGCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTACTCTCCGAAAAATTATCCCAAGGAACCACATTGATACGTAATTGTTGCATATGTAGAATTCTGTaGTGGGTAGGCAGGGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLSEKLSQGTTLIRNCCICRIL*WVGRGN Trigger: ATTACCCCTGCCTACCCACAACAGAATTCTACATAT...GCAACAATTACGTATCAATGTGGTTCCTTGGGATAATTTTTCGGAGAGTAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102863.3 |
||
| CDS-3UTR CAA 90 bp | CTAGACTTAAACTTGAAGCAATCCTCCTGCCTCGGTCTTCTAAATACTTGGATTTCATCTATTACCTTTTaGCGTGCCGTATCAATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDLNLKQSSCLGLLNTWISSITF*RAVSIV Trigger: AACTATTGATACGGCACGCAAAAAGGTAATAGATGA...AATCCAAGTATTTAGAAGACCGAGGCAGGAGGATTGCTTCAAGTTTAAGTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATCAGAGTCCAAGTGACCAAGAACTGGTTCCCATAACAGAGAAACAACAAGCATATTTATATTGTTaGCCTGCCTGTACACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FYQSPSDQELVPITEKQQAYLYC*PACTLY Trigger: ATACAGTGTACAGGCAGGCAAACAATATAAATATGC...TTGTTGTTTCTCTGTTATGGGAACCAGTTCTTGGTCACTTGGACTCTGATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS GCA 90 bp | CTTGTTTTTACCCATAGAGATATTATCATCTATTACCTTTTTGCGTaGCGTATCAATAGTTGGAATAGGCATAGATTCTCCACCAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFTHRDIIIYYLFA*RINSWNRHRFSTNR Trigger: TCGATTGGTGGAGAATCTATGCCTATTCCAACTATTGATACGGCACGCAAAAAGGTAATAGATGATAATATCTCTATGGGTAAAAACAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS CCA 90 bp | AGAGATATTATCATCTATTACCTTTTTGCGTGCCGTATCAATAGTTaGAATAGGCATAGATTCTCCACCAATCGAATCCATTGGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDIIIYYLFACRINS*NRHRFSTNRIHWFS Trigger: AGAAAACCAATGGATTCGATTGGTGGAGAATCTATGCCTATTCCAACTATTGATACGGCACGCAAAAAGGTAATAGATGATAATATCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
||
| CDS GCA 72 bp | AGGAATGGTGCACACAGCTGGGGAGGATACAGCTTTTaGTGTAGGGTCAACCTTTGCACCAATGACTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RNGAHSWGGYSF*CRVNLCTNDWN Trigger: ATTCCAGTCATTGGTGCAAAGGTTGACCCTACAGCAAAAGCTGTATCCTCCCCAGCTGTGTGCACCATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS CCA 72 bp | AGCACTACTCCTTTCTATTTCTCCTGTGGGGCTGTCTaGGTTGGAAGGCTTATTTGCAGACACCGGAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: STTPFYFSCGAV*VGRLICRHRRV Trigger: AACTCTCCGGTGTCTGCAAATAAGCCTTCCAACCCAGACAGCCCCACAGGAGAAATAGAAAGGAGTAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS CCA 72 bp | TGGAATAGGCATAGATTCTCCACCAATCGAATCCATTaGTTTTCTTTTCCGATCCTCGGCAGCCCGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: WNRHRFSTNRIH*FSFPILGSPGL Trigger: GAGTCCCGGGCTGCCGAGGATCGGAAAAGAAAACCAATGGATTCGATTGGTGGAGAATCTATGCCTATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS CAA 72 bp | AGGGTCAGGCGGATCGAGTTTTTGATGACACGGATGTaGTTTGCTGGAACTGGAGATGATGAATCTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RVRRIEFLMTRM*FAGTGDDESGS Trigger: ACTCCCAGATTCATCATCTCCAGTTCCAGCAAACAACATCCGTGTCATCAAAAACTCGATCCGCCTGACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS TCA 72 bp | TCCAGACAAGTGCTATCCAGAGATGATCTTTTGGACTaGAGGCCCCCTGAACTCCGACTTACATCAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRQVLSRDDLLD*RPPELRLTSER Trigger: TCTTTCTGATGTAAGTCGGAGTTCAGGGGGCCTTCAGTCCAAAAGATCATCTCTGGATAGCACTTGTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
||
| CDS CAA 90 bp | TACCGATTAAGGGTCAGGCGGATCGAGTTTTTGATGACACGGATGTaGTTTGCTGGAACTGGAGATGATGAATCTGGGAGTTCTTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: YRLRVRRIEFLMTRM*FAGTGDDESGSSLL Trigger: CAGTAAAGAACTCCCAGATTCATCATCTCCAGTTCCAGCAAACAACATCCGTGTCATCAAAAACTCGATCCGCCTGACCCTTAATCGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020513.10 |
||
| CDS CAA 90 bp | AGGACATGCCAAACTAATTGGAGAGGTAATTCCATAATGCTTCTGTaGACGCTGGCTGTCCAGCATAGTGTTTGCAGACATCTCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RTCQTNWRGNSIMLL*TLAVQHSVCRHLFH Trigger: ATGAAAGAGATGTCTGCAAACACTATGCTGGACAGCCAGCGTCAACAGAAGCATTATGGAATTACCTCTCCAATTAGTTTGGCATGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000102863.3 |
||
| CDS CCA 72 bp | TATGTCTTTCAGCCTCTTAGAAGTCCCATCTGTAGGTaGCGAATGGGATCTTTTGGGTGTAACATTCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: YVFQPLRSPICR*RMGSFGCNILS Trigger: ACTAAGAATGTTACACCCAAAAGATCCCATTCGCCACCTACAGATGGGACTTCTAAGAGGCTGAAAGACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
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| CDS CAA 90 bp | GTAATATTTGATATCCCATTTAGATGTGGTTGTCCCTGGACAGGGTaGTGGGGTGTTGTGATTCTAGGAATAACATTCCGTCCTACTACA | + |
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Preference number: 6 (lower is better) Translates to: VIFDIPFRCGCPWTG*WGVVILGITFRPTT Trigger: TGTAGTAGGACGGAATGTTATTCCTAGAATCACAACACCCCACAACCCTGTCCAGGGACAACCACATCTAAATGGGATATCAAATATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
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| CDS CCA 72 bp | TTCAGCCTCTTAGAAGTCCCATCTGTAGGTGGCGAATaGGATCTTTTGGGTGTAACATTCTTAGTAATATTT | + |
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Preference number: 6 (lower is better) Translates to: FSLLEVPSVGGE*DLLGVTFLVIF Trigger: AAATATTACTAAGAATGTTACACCCAAAAGATCCCATTCGCCACCTACAGATGGGACTTCTAAGAGGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
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| CDS CAA 72 bp | CTACTAATCCAACCCATTCTAGATGGTTCTCTTCTGTaGATGCACTGGCAGTCAGTACTATATAATGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLIQPILDGSLL*MHWQSVLYNVC Trigger: ACAGACATTATATAGTACTGACTGCCAGTGCATCAACAGAAGAGAACCATCTAGAATGGGTTGGATTAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000102863.3 |
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| CDS CAA 90 bp | TTCAGCCTCTTAGAAGTCCCATCTGTAGGTGGCGAATGGGATCTTTaGGGTGTAACATTCTTAGTAATATTTGATATCCCATTTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: FSLLEVPSVGGEWDL*GVTFLVIFDIPFRC Trigger: ACATCTAAATGGGATATCAAATATTACTAAGAATGTTACACCCAAAAGATCCCATTCGCCACCTACAGATGGGACTTCTAAGAGGCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
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| CDS CCA 72 bp | ATCATCTATTACCTTTTTGCGTGCCGTATCAATAGTTaGAATAGGCATAGATTCTCCACCAATCGAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: IIYYLFACRINS*NRHRFSTNRIH Trigger: ATGGATTCGATTGGTGGAGAATCTATGCCTATTCCAACTATTGATACGGCACGCAAAAAGGTAATAGATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS CAA 72 bp | TTAGAAGTCCCATCTGTAGGTGGCGAATGGGATCTTTaGGGTGTAACATTCTTAGTAATATTTGATATCCCA | + |
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Preference number: 6 (lower is better) Translates to: LEVPSVGGEWDL*GVTFLVIFDIP Trigger: TGGGATATCAAATATTACTAAGAATGTTACACCCAAAAGATCCCATTCGCCACCTACAGATGGGACTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000145013.2 |
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| CDS GCA 72 bp | ACCCATAGAGATATTATCATCTATTACCTTTTTGCGTaGCGTATCAATAGTTGGAATAGGCATAGATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: THRDIIIYYLFA*RINSWNRHRFS Trigger: GGAGAATCTATGCCTATTCCAACTATTGATACGGCACGCAAAAAGGTAATAGATGATAATATCTCTATGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145013.2 |
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| CDS CCA 72 bp | AATATGATCAATTTCTTTAGGACATGCCAAACTAATTaGAGAGGTAATTCCATAATGCTTCTGTTGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: NMINFFRTCQTN*RGNSIMLLLTL Trigger: CAGCGTCAACAGAAGCATTATGGAATTACCTCTCCAATTAGTTTGGCATGTCCTAAAGAAATTGATCATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020513.10 ENSMUST00000102863.3 |
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