Pregenerated sensors for PAPOLA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021111Ensembl transcript IDs: ENSMUST00000021535.14, ENSMUST00000109901.9, ENSMUST00000163473.8, ENSMUST00000164326.8, ENSMUST00000166329.8, ENSMUST00000166471.8, ENSMUST00000166735.8, ENSMUST00000168186.8, ENSMUST00000169938.8, ENSMUST00000170002.8, ENSMUST00000172089.2
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCGCAGAGATCAAAGGGCCGCCTCCGGGGATGCTTCACAGGTATaGCTTCAGTCACTCTCAAGTTCTAGCCATGGGACCAAAGTTAGT | + |
|
Preference number: 1 (lower is better) Translates to: PRRDQRAASGDASQV*LQSLSSSSHGTKVS Trigger: ACTAACTTTGGTCCCATGGCTAGAACTTGAGAGTGACTGAAGCCATACCTGTGAAGCATCCCCGGAGGCGGCCCTTTGATCTCTGCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 90 bp | AGGAATGCTTTCGCTCGATGGACCCCCTGGGCTTTCACTGGAATTTaGTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACAGA | + |
|
Preference number: 1 (lower is better) Translates to: RNAFARWTPWAFTGI*LRYRNLRSLDAGHR Trigger: TCTGTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAAAGCATTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR GCA 90 bp | CAGCGAAATGAAGGATTCAAAAACCATGCTCATACAAAGATCTGCTaGTACAGGTCTGTTTTACCCAGATTAACAAAGAGTAACTTTATC | + |
|
Preference number: 1 (lower is better) Translates to: QRNEGFKNHAHTKIC*YRSVLPRLTKSNFI Trigger: GATAAAGTTACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGAATCCTTCATTTCGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 90 bp | ATGCAGCGAAATGAAGGATTCAAAAACCATGCTCATACAAAGATCTaGTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: MQRNEGFKNHAHTKI*CYRSVLPRLTKSNF Trigger: AAAGTTACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGAATCCTTCATTTCGCTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGAGCAGGACTGTTTCTaGCCTGGGAGCTGCCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMEQDCF*PGSCQN Trigger: GTTCTGGCAGCTCCCAGGGCAGAAACAGTCCTGCTC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGAAGGGCAAGGTGACTaGAGAGCAAGAGGTGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMEGQGD*RARGGE Trigger: CTCTCCACCTCTTGCTCTGCAGTCACCTTGCCCTTC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCGAGCAGGACTGTTTCTaGCCTGGGAGCTGCCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GPPGLSLEFACGTETSEAEQDCF*PGSCQN Trigger: GTTCTGGCAGCTCCCAGGGCAGAAACAGTCCTGCTC...GGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCTGGGAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTGCTGCCCGTAAGGACTaGGCTGAGCTCGGTGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SALGAARTIQWTGLHSTGAARKD*AELGVL Trigger: GAGGACACCGAGCTCAGCCCAGTCCTTACGGGCAGC...ACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGCTGATCAAGTGCTCATaGGCCCAAGGCAGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSLIKCS*AQGREA Trigger: GGCCTCCCTGCCTTGGGCTCATGAGCACTTGATCAG...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR CAA 90 bp | GAGGAATGCTTTCGCTCGATGGACCCCCTGGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: EECFRSMDPLGFHWN*LAVQKPQKPGCWSQ Trigger: CTGTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAAAGCATTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCCATAGCACTGGTGGGTaGAGGCACAGACATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GPPGLSLEFACGTETSEAHSTGG*RHRHAV Trigger: AACAGCATGTCTGTGCCTTCACCCACCAGTGCTATG...GGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGTTATGGACCCTGAGGTaGTTTTACCGATTCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMLWTLR*FYRFSL Trigger: GAGACTGAATCGGTAAAACCACCTCAGGGTCCATAA...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTGGGTGAAGGCAGCTCGGTGTCCTCCTaGCCTTTCTGGGACAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: ELPELFNGLVFIALVGEGSSVSS*PFWDRM Trigger: CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCT...GCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACGGAGGAAGGGCAAGGTaGCTGCAGAGCAAGAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYGGRAR*LQSKRW Trigger: CCACCTCTTGCTCTGCAGTCACCTTGCCCTTCCTCC...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTTCCTCCTGCCCTTTCTaGGACAGAATGGTACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: DPLGFHWNLLAVQKPQKPSSCPF*DRMVHQ Trigger: TTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGGA...AGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCGGAACAGGAGTTGTGTaGAGTGTACAAAAGTCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GPPGLSLEFACGTETSEAGTGVV*SVQKSS Trigger: CGAGGACTTTTGTACACTCCACACAACTCCTGTTCC...GGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTGGGTGAAGGCGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ELPELFNGLVFIALVGEGDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...GCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGCTTTGTTTAAGCATCTaGAGACAACGGGTTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQLCLSI*RQRVEL Trigger: CAACTCAACCCGTTGTCTCCAGATGCTTAAACAAAG...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTCAGCCTGGTGAAACTTaGATGCAGTTACATGGAACG | + |
|
Preference number: 2 (lower is better) Translates to: DPLGFHWNLLAVQKPQKPQPGET*MQLHGT Trigger: CGTTCCATGTAACTGCATCCAAGTTTCACCAGGCTG...AGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCTGGGAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTACTGGGGTTTACCCTTaGGTCCCACACAGGCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: SALGAARTIQWTGLHSTGTGVYP*VPHRQI Trigger: AATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGT...ACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACAGCTCGGTGTCCTCCTaGCCTTTCTGGGACAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYSSVSS*PFWDRM Trigger: CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCT...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTCTGATCAAGTGCTCATaGGCCCAAGGCAGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSLIKCS*AQGREA Trigger: GGCCTCCCTGCCTTGGGCTCATGAGCACTTGATCAG...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTGGGTGAAGGCCTTTCTGGGACAGAATaGTACACCAATGCACAACGT | + |
|
Preference number: 2 (lower is better) Translates to: ELPELFNGLVFIALVGEGLSGTE*YTNAQR Trigger: ACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAG...GCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTATTC | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYGLFLP*ELPELF Trigger: GAATAGTTCTGGCAGCTCCCAGGGCAGAAACAGTCC...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGCCTCAGAAGCCTGGATaGTGGTCACAGATGCTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMPQKPG*WSQMLR Trigger: CCGCAGCATCTGTGACCAGCATCCAGGCTTCTGAGG...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCTGCCCTTTCTGGGACAGAATGGTACACCAATGCACAACGTATCCAATTTTCTTTACTCAAATGGTaGGAGGAAGGGCAAGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPALSGTEWYTNAQRIQFSLLKW*EEGQGD Trigger: GTCACCTTGCCCTTCCTCCCACCATTTGAGTAAAGA...AAATTGGATACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACGCATTCTGGTTTCTGTaGAATAAGCCTTACCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FTGICLRYRNLRSLDAGHAFWFL*NKPYLV Trigger: CACAAGGTAAGGCTTATTTCACAGAAACCAGAATGC...GTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGATACTGTTTATGGACCCTGAGGTGGTTTTACCGATTCAGTCTCAGTTTTGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GRYCLWTLRWFYRFSLSFVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...AAAACTGAGACTGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACCAAAAGAACAGAGCTTaGGAAAGCTCAAAGACCACA | + |
|
Preference number: 2 (lower is better) Translates to: FTGICLRYRNLRSLDAGHQKNRA*ESSKTT Trigger: TGTGGTCTTTGAGCTTTCGCAAGCTCTGTTCTTTTG...GTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: DPLGFHWNLLAVQKPQKPSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...AGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGATACTGTTTATGGACCCTGAGGTGGTTTTACCGATTCAGTCTCAGTTTTTTCTGCCCTGGGAGCTaGCAGAACTATTCAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GRYCLWTLRWFYRFSLSFFCPGS*QNYSMD Trigger: GTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGAA...AAAACTGAGACTGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATGCTGCCCGTAAGGACTaGGCTGAGCTCGGTGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KYRLILLSVSKVYLSIDNAARKD*AELGVL Trigger: GAGGACACCGAGCTCAGCCCAGTCCTTACGGGCAGC...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR CAA 90 bp | CCAACAGAGAAGCCGATGCCGGAACAGTTTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGTC | + |
|
Preference number: 2 (lower is better) Translates to: PTEKPMPEQFLIEPH*SPDQLVPLSLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTTCTCTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAAGTTCTAGCCATGGGACCAAAGTTAGTGTCTGTGTCACGCAGCCACAGGTTGTTGGCCGAATGCTaGTTTGTATGCACTATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQVLAMGPKLVSVSRSHRLLAEC*FVCTIK Trigger: TTTTATAGTGCATACAAATCAGCATTCGGCCAACAA...CCTGTGGCTGCGTGACACAGACACTAACTTTGGTCCCATGGCTAGAACTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGGCTGTGTGGCAGTTTaGGGAATGCTTTCGCTCGAT | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMGCVAV*GMLSLD Trigger: ATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCCCTGGGAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTTGCTTTCTCTTCACATaGATTGCTGCAATCTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: SALGAARTIQWTGLHSTGCFLFT*IAAIFI Trigger: TATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCA...ACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCTTTGTTTAAGCATCTaGAGACAACGGGTTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NAAHRGAIRMSVMDTNIALCLSI*RQRVEL Trigger: CAACTCAACCCGTTGTCTCCAGATGCTTAAACAAAG...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACGATGCTTCACAGGTATaGCTTCAGTCACTCTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYDASQV*LQSLSS Trigger: ACTTGAGAGTGACTGAAGCCATACCTGTGAAGCATC...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SKTMLIQRSAATGLFYPDGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGGCAGATACTGTTTATaGACCCTGAGGTGGTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIGRYCL*TLRWFY Trigger: GTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGCCCTTTCTGGGACAGAATGGTACACCAATGCACAACGTATCCAATTTAATGAGGAGTTCTTCTaGCAGCTTGTATTGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PPALSGTEWYTNAQRIQFNEEFF*QLVLQF Trigger: AAACTGCAATACAAGCTGGCAGAAGAACTCCTCATT...AAATTGGATACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATACTTTGTTTAAGCATCTaGAGACAACGGGTTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NNAAHRGAIRMSVMDTNILCLSI*RQRVEL Trigger: CAACTCAACCCGTTGTCTCCAGATGCTTAAACAAAG...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTTCCTCCTGCCCTTTCTaGGACAGAATGGTACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSSSCPF*DRMVHQ Trigger: TTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGGA...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTACTGGGGTTTACCCTTaGGTCCCACACAGGCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSTGVYP*VPHRQI Trigger: AATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGT...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGATACTGTTTATGGACCCTGAGGTGGTTTTACCGATTCAGTCTCAGTTTTATAAGCCTTACCTTGTaGATACAAGCAAAGGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRYCLWTLRWFYRFSLSFISLTL*IQAKGK Trigger: TTTCCCCTTTGCTTGTATGCACAAGGTAAGGCTTAT...AAAACTGAGACTGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATCAACATCTGGCACCCGTCAGATGTCACAAGATGGACGAGAATTCTGCTACTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSTSGTRQMSQDGREFCYSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...GTAGCAGAATTCTCGTCCATCTTGTGACATCTGACGGGTGCCAGATGTTGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAACACTAACGCTAGTCAATTACTCTAAGGAGTTATTGACTGTCTACAGAATAAATCTCTCTGAGCCTTaGACACAGGTCCGGAACACT | + |
|
Preference number: 2 (lower is better) Translates to: PTLTLVNYSKELLTVYRINLSEP*TQVRNT Trigger: AGTGTTCCGGACCTGTGTGCAAGGCTCAGAGAGATT...TATTCTGTAGACAGTCAATAACTCCTTAGAGTAATTGACTAGCGTTAGTGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTACAGCCTGGTGAAACTTaGATGCAGTTACATGGAACG | + |
|
Preference number: 2 (lower is better) Translates to: KNHAHTKICCYRSVLPRLQPGET*MQLHGT Trigger: CGTTCCATGTAACTGCATCCAAGTTTCACCAGGCTG...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGGATGCTTCACAGGTATaGCTTCAGTCACTCTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMDASQV*LQSLSS Trigger: ACTTGAGAGTGACTGAAGCCATACCTGTGAAGCATC...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAGGAACAGGAGTTGTGTaGAGTGTACAAAAGTCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: KNHAHTKICCYRSVLPRLGTGVV*SVQKSS Trigger: CGAGGACTTTTGTACACTCCACACAACTCCTGTTCC...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATACTTTGGAAATTAATTTaGAAGGACAGGGGAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: NNAAHRGAIRMSVMDTNILWKLI*KDRGEF Trigger: AAACTCTCCCCTGTCCTTCCAAATTAATTTCCAAAG...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATGCATTCTGGTTTCTGTaGAATAAGCCTTACCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SKTMLIQRSAATGLFYPDAFWFL*NKPYLV Trigger: CACAAGGTAAGGCTTATTTCACAGAAACCAGAATGC...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATCTGGTGAAACTTGGATaGAGTTACATGGAACGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SKTMLIQRSAATGLFYPDLVKLG*SYMERL Trigger: TAAACGTTCCATGTAACTGCATCCAAGTTTCACCAG...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTAATGAGGAGTTCTTCTaGCAGCTTGTATTGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSNEEFF*QLVLQF Trigger: AAACTGCAATACAAGCTGGCAGAAGAACTCCTCATT...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTATAAGCCTTACCTTGTaGATACAAGCAAAGGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSISLTL*IQAKGK Trigger: TTTCCCCTTTGCTTGTATGCACAAGGTAAGGCTTAT...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTGCTCATACAAAGATCTaGTGCTACAGGTCTGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: AHTKICCYRSVLPRLTKSAHTKI*CYRSVL Trigger: TAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGCTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LNRTCLQINLFLCLCFIMLHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATCTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 2 (lower is better) Translates to: SKTMLIQRSAATGLFYPDLHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATTCTTCTTTACTCAAATaGTGGGAGGAAGGGCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: KYRLILLSVSKVYLSIDNSSLLK*WEEGQG Trigger: ACCTTGCCCTTCCTCCCACCATTTGAGTAAAGAAGA...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR CCA 72 bp | CAATTCACCCTAAGGGCTACAGCTGCCCGTAAGGACTaGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QFTLRATAARKD*AELGVLLPFLG Trigger: TCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGGCAGCTGTAGCCCTTAGGGTGAATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR CCA 72 bp | GATCAAAGGGCCGCCTCCGGGGATGCTTCACAGGTATaGCTTCAGTCACTCTCAAGTTCTAGCCATGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: DQRAASGDASQV*LQSLSSSSHGT Trigger: GGTCCCATGGCTAGAACTTGAGAGTGACTGAAGCCATACCTGTGAAGCATCCCCGGAGGCGGCCCTTTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | AAGTCCTCGCAGAGATCAAAGGGCCGCCTCCGGGGATaGTTCACAGGTATGGCTTCAGTCACTCTCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSSQRSKGRLRG*FTGMASVTLKF Trigger: GAACTTGAGAGTGACTGAAGCCATACCTGTGAAGCATCCCCGGAGGCGGCCCTTTGATCTCTGCGAGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | TTCGCTCGATGGACCCCCTGGGCTTTCACTGGAATTTaGTTGCGGTACAGAAACCTCAGAAGCCTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FARWTPWAFTGI*LRYRNLRSLDA Trigger: AGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR CCA 72 bp | GAATGCTTTCGCTCGATGGACCCCCTGGGCTTTCACTaGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ECFRSMDPLGFH*NLLAVQKPQKP Trigger: AGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAAAGCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACAGGAGTTGTGTGGAGTGTACAAAAGTCCTCGCAGAGATCAAAGGGCCGCCAGTCAGGTCTAGTCTaGTCCCTCCAATCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTGVVWSVQKSSQRSKGRQSGLV*SLQSPL Trigger: AAGAGGAGATTGGAGGGACAAGACTAGACCTGACTG...GCGGCCCTTTGATCTCTGCGAGGACTTTTGTACACTCCACACAACTCCTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCCAGCAGCTGATGGAGTaGCTTTCTCTTCACATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPPGLSLEFACGTETSEAQQLME*LSLHMH Trigger: ATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG...GGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR TCA 72 bp | AGAGGCCAACAGAGAAGCCGATGCCGGAACAGTTTCTaGTTGAACCGCACTTGTCTCCAGATCAACTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RGQQRSRCRNSF*LNRTCLQINLF Trigger: GAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTTCTCTGTTGGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR TCA 72 bp | GCCAACAGAGAAGCCGATGCCGGAACAGTTTCTGATTaGACCGCACTTGTCTCCAGATCAACTTGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ANREADAGTVSD*TALVSRSTCSF Trigger: AAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTTCTCTGTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATACAGTCAGGTCTAGTCTaGTCCCTCCAATCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIQSGLV*SLQSPL Trigger: AAGAGGAGATTGGAGGGACAAGACTAGACCTGACTG...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCTGGGAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTAGTTCTTCTGCCAGCTaGTATTGCAGTTTTCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SALGAARTIQWTGLHSTGSSSAS*YCSFPN Trigger: GTTTGGAAAACTGCAATACAAGCTGGCAGAAGAACT...ACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGATACTGTTTATGGACCCTGAGGTGGTTTTACCGATTCAGTCTCAGTTTTTGGCTGTGTGGCAGTTaGAGGAATGCTTTCGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: GRYCLWTLRWFYRFSLSFWLCGS*RNAFAR Trigger: TCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCA...AAAACTGAGACTGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | AAGAAGGTGAAGGTTTGTGAATTAGCAAGACAAGACTaGTTGTGTGCATATGGAACTGTCCCAGCCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: KKVKVCELARQD*LCAYGTVPANT Trigger: AGTGTTGGCTGGGACAGTTCCATATGCACACAAGCAGTCTTGTCTTGCTAATTCACAAACCTTCACCTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTGCCCTTTCTGGGACAGAATGGTACACCAATGCACAACGTATCCAATTTCATAGCTCGAGGGTTTaGTTTTGTTTCCTTCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPALSGTEWYTNAQRIQFHSSRV*FCFLLK Trigger: TTTAAGAAGGAAACAAAACAAAACCCTCGAGCTATG...AAATTGGATACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR CCA 72 bp | AAAATCAATTTGTCTAAGACAGGAACAGGAGTTGTGTaGAGTGTACAAAAGTCCTCGCAGAGATCAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KINLSKTGTGVV*SVQKSSQRSKG Trigger: GCCCTTTGATCTCTGCGAGGACTTTTGTACACTCCACACAACTCCTGTTCCTGTCTTAGACAAATTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | CAGCAGCTGATGGAGTTGCTTTCTCTTCACATGCATTaGTGCAATCTTCATATCCAACTCAAACATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QQLMELLSLHMH*CNLHIQLKHFA Trigger: AGCAAAATGTTTGAGTTGGATATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LNRTCLQINLFLCLCFIMCDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR CCA 72 bp | ATGCATAGCTTCAGGGGAAAGACTATACTCCAACTTTaGAAATTAATTTGGAAGGACAGGGGAGAGTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MHSFRGKTILQL*KLIWKDRGEFK Trigger: CTTAAACTCTCCCCTGTCCTTCCAAATTAATTTCCAAAGTTGGAGTATAGTCTTTCCCCTGAAGCTATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGTCATCCTCTTCTGTTTaGGTTTTCTTAGGACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LNRTCLQINLFLCLCFIMSSSSV*VFLGLS Trigger: AGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGA...CATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | GAAGGATTCAAAAACCATGCTCATACAAAGATCTGCTaGTACAGGTCTGTTTTACCCAGATTAACAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGFKNHAHTKIC*YRSVLPRLTKS Trigger: ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGAATCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR GCA 72 bp | AATGAAGGATTCAAAAACCATGCTCATACAAAGATCTaGTGCTACAGGTCTGTTTTACCCAGATTAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NEGFKNHAHTKI*CYRSVLPRLTK Trigger: CTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGAATCCTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATTCATCCTCTTCTGTTTaGGTTTTCTTAGGACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KYRLILLSVSKVYLSIDNSSSSV*VFLGLS Trigger: AGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGA...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGAGCAGGACTGTTTCTaGCCTGGGAGCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQEQDCF*PGSCQN Trigger: GTTCTGGCAGCTCCCAGGGCAGAAACAGTCCTGCTC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGCCTCAGAAGCCTGGATaGTGGTCACAGATGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQPQKPG*WSQMLR Trigger: CCGCAGCATCTGTGACCAGCATCCAGGCTTCTGAGG...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGAGCAGGACTGTTTCTaGCCTGGGAGCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVEQDCF*PGSCQN Trigger: GTTCTGGCAGCTCCCAGGGCAGAAACAGTCCTGCTC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTGCTGCGGTCACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVCCGHS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGCTCGATGGACCCCCTaGGCTTTCACTGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQARWTP*AFTGIC Trigger: GCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTCCTCAGAAGCCTGGATaGTGGTCACAGATGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLPQKPG*WSQMLR Trigger: CCGCAGCATCTGTGACCAGCATCCAGGCTTCTGAGG...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGTGGCAGTTTGAGGAATaGTTTCGCTCGATGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQWQFEE*FRSMDP Trigger: GGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQGLFLP*ELPELF Trigger: GAATAGTTCTGGCAGCTCCCAGGGCAGAAACAGTCC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGCTCGATGGACCCCCTaGGCTTTCACTGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVARWTP*AFTGIC Trigger: GCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTGGCTGCGTTTGTTGTaGTCCCTGCGTTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVWLRLL*SLRCNW Trigger: CCAGTTACAACGCAGGGATCACAACAAACGCAGCCA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCCATAGCACTGGTGGGTaGAGGCACAGACATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVHSTGG*RHRHAV Trigger: AACAGCATGTCTGTGCCTTCACCCACCAGTGCTATG...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGCCTCAGAAGCCTGGATaGTGGTCACAGATGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSPQKPG*WSQMLR Trigger: CCGCAGCATCTGTGACCAGCATCCAGGCTTCTGAGG...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTGGCAGTTTGAGGAATaGTTTCGCTCGATGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVWQFEE*FRSMDP Trigger: GGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGACTGGGGTTTACCCTTaGGTCCCACACAGGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQTGVYP*VPHRQI Trigger: AATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGT...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCCCCCTGGGCTTTCACTaGAATTTGCTTGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVPLGFH*NLLAVQ Trigger: CTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGG...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| 3UTR CAA 72 bp | TTTCGCTCGATGGACCCCCTGGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FRSMDPLGFHWN*LAVQKPQKPGC Trigger: GCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTTGGCTGCGTTTGTTGTaGTCCCTGCGTTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLWLRLL*SLRCNW Trigger: CCAGTTACAACGCAGGGATCACAACAAACGCAGCCA...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGGCTGTGTGGCAGTTTaGGGAATGCTTTCGCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLGCVAV*GMLSLD Trigger: ATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGTTTGTTGTGATCCCTaGGTTGTAACTGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVVCCDP*VVTGNG Trigger: GCCGTTTCCAGTTACAACGCAGGGATCACAACAAAC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTACTGGGGTTTACCCTTaGGTCCCACACAGGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLTGVYP*VPHRQI Trigger: AATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGT...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTTGTAGGCTTTGGTGGTaGAGAAATGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLCRLWW*RNGWLC Trigger: ACACAGCCAGCCATTTCTCCACCACCAAAGCCTACA...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCAACACACAACGCATCAATATCAGCACCTTTCGTGTGGACTCCTAGTCTGTGGCTGCGTTTGTTGTaGTCCCTGCGTTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GATHNASISAPFVWTPSLWLRLL*SLRCNW Trigger: CCAGTTACAACGCAGGGATCACAACAAACGCAGCCA...CAGACTAGGAGTCCACACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164326.8 |
||
| CDS-3UTR TCA 90 bp | TTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACTGGCTGCGTTTGTTGTaGTCCCTGCGTTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTGICLRYRNLRSLDAGHWLRLL*SLRCNW Trigger: CCAGTTACAACGCAGGGATCACAACAAACGCAGCCA...GTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTTCTTCTTTATTGGGTaGGGACGTTCTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVFFFIG*GRSLDS Trigger: GGAGTCAAGAGAACGTCCTCACCCAATAAAGAAGAA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTTTGTTGTGATCCCTaGGTTGTAACTGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLVCCDP*VVTGNG Trigger: GCCGTTTCCAGTTACAACGCAGGGATCACAACAAAC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGTTCTGCCCTGGGAGCTaGCAGAACTATTCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSFCPGS*QNYSMD Trigger: GTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGAA...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCTGGGAGCTGCCAGAACTATTCAATGGACTGGTCTTCATAGCACTGGTGTTTGTTGTGATCCCTaGGTTGTAACTGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SALGAARTIQWTGLHSTGVCCDP*VVTGNG Trigger: GCCGTTTCCAGTTACAACGCAGGGATCACAACAAAC...ACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGCTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQLHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGCTTTCACTGGAATTTaGTTGCGGTACAGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLAFTGI*LRYRNL Trigger: GAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGC...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTTGGCAGTTTGAGGAATaGTTTCGCTCGATGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: NAAHRGAIRMSVMDTNIAWQFEE*FRSMDP Trigger: GGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGAGTTGTGTGGAGTGTACAAAAGTCCTCGCAGAGATCAAAGGGCCGCTCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GTGVVWSVQKSSQRSKGRSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...GCGGCCCTTTGATCTCTGCGAGGACTTTTGTACACTCCACACAACTCCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCCTGGGCTTTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTTCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DPLGFHWNLLAVQKPQKPSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...AGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCCCTTTCTGGGACAGAATGGTACACCAATGCACAACGTATCCAATTTCCCCTGGGCTTTCACTaGAATTTGCTTGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPALSGTEWYTNAQRIQFPLGFH*NLLAVQ Trigger: CTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGG...AAATTGGATACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCGAAAGCTCAAAGACCACACTTGTTGGCCGAATGCTGATTTGTATGCAGCTCGATGGACCCCCTaGGCTTTCACTGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLKDHTCWPNADLYAARWTP*AFTGIC Trigger: GCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGC...TGCATACAAATCAGCATTCGGCCAACAAGTGTGGTCTTTGAGCTTTCGCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAAHRGAIRMSVMDTNIADCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NAAHRGAIRMSVMDTNIAGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATACATAGCACTGGTGGGTaGAGGCACAGACATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIHSTGG*RHRHAV Trigger: AACAGCATGTCTGTGCCTTCACCCACCAGTGCTATG...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NAAHRGAIRMSVMDTNIAVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCAACACACAACGCATCAATATCAGCACCTTTCGTGTGGACTCCTAGTCTGGTTTGTTGTGATCCCTaGGTTGTAACTGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GATHNASISAPFVWTPSLVCCDP*VVTGNG Trigger: GCCGTTTCCAGTTACAACGCAGGGATCACAACAAAC...CAGACTAGGAGTCCACACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164326.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCCTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVLHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGTGCTTTCTCTTCACATaGATTGCTGCAATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQCFLFT*IAAIFI Trigger: TATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCA...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCAAGACAAGACTGCTTGTGTGCATATGGAACTGTCCCAGCCAACACTAACGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LARQDCLCAYGTVPANTNDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...GTTAGTGTTGGCTGGGACAGTTCCATATGCACACAAGCAGTCTTGTCTTGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR TCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGTGTGCATATGGAACTGTCCCAGCCAACACTAACGCTAGTCAATTACTCTGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACVHMELSQPTLTLVNYSVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...AGAGTAATTGACTAGCGTTAGTGTTGGCTGGGACAGTTCCATATGCACACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTGCTTTCTCTTCACATaGATTGCTGCAATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GREATKQLNPLSVRSSLVCFLFT*IAAIFI Trigger: TATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNHAHTKICCYRSVLPRLAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTGCTGCGGTCACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKTMLIQRSAATGLFYPDCCGHS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCA...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTGCTGCGGTCACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFCCGHS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGTGCATATGGAACTGTCCCAGCCAACACTAACGCTAGTCAATTACTCTTGTAGGCTTTGGTGGTaGAGAAATGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACVHMELSQPTLTLVNYSCRLWW*RNGWLC Trigger: ACACAGCCAGCCATTTCTCCACCACCAAAGCCTACA...AGAGTAATTGACTAGCGTTAGTGTTGGCTGGGACAGTTCCATATGCACACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR GCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGTTTGTTGTGATCCCTaGGTTGTAACTGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIVCCDP*VVTGNG Trigger: GCCGTTTCCAGTTACAACGCAGGGATCACAACAAAC...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGREATKQLNPLSVRSSLSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGAGCAGGACTGTTTCTaGCCTGGGAGCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCEQDCF*PGSCQN Trigger: GTTCTGGCAGCTCCCAGGGCAGAAACAGTCCTGCTC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGCTGGTCACAGATGCTaGGGTCACAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLAGHRC*GHSWSR Trigger: CCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNHAHTKICCYRSVLPRLDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR GCA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTGCTTTCACTGGAATTTaGTTGCGGTACAGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAAHRGAIRMSVMDTNIAAFTGI*LRYRNL Trigger: GAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGC...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTGCTGCGGTCACAGCTaGAGCAGGACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCCCGHS*SRTVSA Trigger: GGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATCATAGCACTGGTGGGTaGAGGCACAGACATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKTMLIQRSAATGLFYPDHSTGG*RHRHAV Trigger: AACAGCATGTCTGTGCCTTCACCCACCAGTGCTATG...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGGCTGTGTGGCAGTTTaGGGAATGCTTTCGCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFGCVAV*GMLSLD Trigger: ATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATGGCTGTGTGGCAGTTTaGGGAATGCTTTCGCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKTMLIQRSAATGLFYPDGCVAV*GMLSLD Trigger: ATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCC...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCGAAAGCTCAAAGACCACACTTGTTGGCCGAATGCTGATTTGTATGCATTCTTCTTTATTGGGTaGGGACGTTCTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLKDHTCWPNADLYAFFFIG*GRSLDS Trigger: GGAGTCAAGAGAACGTCCTCACCCAATAAAGAAGAA...TGCATACAAATCAGCATTCGGCCAACAAGTGTGGTCTTTGAGCTTTCGCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGTGCTTTCTCTTCACATaGATTGCTGCAATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSCFLFT*IAAIFI Trigger: TATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCA...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGATGCTGGTCACAGATaGTGCGGTCACAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLDAGHR*CGHSWS Trigger: GCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTGGCAGTTTGAGGAATaGTTTCGCTCGATGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFWQFEE*FRSMDP Trigger: GGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | ACGCATCAATATCAGCACCTTTCGTGTGGACTCCTAGTCTGTAAGATCCAAATGTGGGAGATTCTGCGCTaGAGTTCCTCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THQYQHLSCGLLVCKIQMWEILR*SSSSSS Trigger: TGAAGAAGAAGAGGAACTGCAGCGCAGAATCTCCCA...CATTTGGATCTTACAGACTAGGAGTCCACACGAAAGGTGCTGATATTGATGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164326.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFGLFLP*ELPELF Trigger: GAATAGTTCTGGCAGCTCCCAGGGCAGAAACAGTCC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGCTCGATGGACCCCCTaGGCTTTCACTGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCARWTP*AFTGIC Trigger: GCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGACTGTAGGCTTTGGTaGTGGAGAAATGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFDCRLW*WRNGWL Trigger: CAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| 3UTR CAA 72 bp | AAGCCGATGCCGGAACAGTTTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPMPEQFLIEPH*SPDQLVPLSLF Trigger: AAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTTCTGCCCTGGGAGCTaGCAGAACTATTCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFFCPGS*QNYSMD Trigger: GTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGAA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTATGGCAGTTTGAGGAATaGTTTCGCTCGATGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNHAHTKICCYRSVLPRLWQFEE*FRSMDP Trigger: GGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGACGCTGCTTTTCCGTaGGCGCACTTGCTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCDAAFP*AHLLEV Trigger: TACTTCTAGCAAGTGCGCCCACGGAAAAGCAGCGTC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGGACTGTTTCTGCCCTaGGAGCTGCCAGAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCGLFLP*ELPELF Trigger: GAATAGTTCTGGCAGCTCCCAGGGCAGAAACAGTCC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTCCCCTGGGCTTTCACTaGAATTTGCTTGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCPLGFH*NLLAVQ Trigger: CTGTACCGCAAGCAAATTCCAGTGAAAGCCCAGGGG...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGCTCGATGGACCCCCTaGGCTTTCACTGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLARWTP*AFTGIC Trigger: GCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTGTAGGCTTTGGTGGTaGAGAAATGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFCRLWW*RNGWLC Trigger: ACACAGCCAGCCATTTCTCCACCACCAAAGCCTACA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| 3UTR CAA 72 bp | AAGGTGAAGGTTTGTGAATTAGCAAGACAAGACTGCTaGTGTGCATATGGAACTGTCCCAGCCAACACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVKVCELARQDC*CAYGTVPANTN Trigger: GTTAGTGTTGGCTGGGACAGTTCCATATGCACACAAGCAGTCTTGTCTTGCTAATTCACAAACCTTCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTACATAGCACTGGTGGGTaGAGGCACAGACATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLHSTGG*RHRHAV Trigger: AACAGCATGTCTGTGCCTTCACCCACCAGTGCTATG...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGGCTGTGTGGCAGTTTaGGGAATGCTTTCGCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLGCVAV*GMLSLD Trigger: ATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAGTACTGGATGTTTTCTaGGAGGCCAACAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNHAHTKICCYRSVLPRLVLDVF*EANREA Trigger: GGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTAC...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR GCA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATACTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NNAAHRGAIRMSVMDTNILHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGCCCTTTCTGGGACAGAATGGTACACCAATGCACAACGTATCCAATTTTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPALSGTEWYTNAQRIQFSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...AAATTGGATACGTTGTGCATTGGTGTACCATTCTGTCCCAGAAAGGGCAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTCTGCCCTGGGAGCTaGCAGAACTATTCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCFCPGS*QNYSMD Trigger: GTCCATTGAATAGTTCTGGCAGCTCCCAGGGCAGAA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTGTAGGCTTTGGTGGTaGAGAAATGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCCRLWW*RNGWLC Trigger: ACACAGCCAGCCATTTCTCCACCACCAAAGCCTACA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACTAACGCTAGTCAATTACTCTAAGGAGTTATTGACTGTCTACAGAATAGGAGACTGTAGGCTTTaGTGGTGGAGAAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTLVNYSKELLTVYRIGDCRL*WWRNGW Trigger: CCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCC...TATTCTGTAGACAGTCAATAACTCCTTAGAGTAATTGACTAGCGTTAGTGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| 3UTR CAA 72 bp | GCAGCAGCTGATGGAGTTGCTTTCTCTTCACATGCATaGCTGCAATCTTCATATCCAACTCAAACATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAADGVAFSSHA*LQSSYPTQTFC Trigger: GCAAAATGTTTGAGTTGGATATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR TCA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATTGGCTGCGTTTGTTGTaGTCCCTGCGTTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYRLILLSVSKVYLSIDNWLRLL*SLRCNW Trigger: CCAGTTACAACGCAGGGATCACAACAAACGCAGCCA...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGTTTACCAGTCGTGTTaGGGAGACAACTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLVYQSC*GDNSGD Trigger: GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAAC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTTCTTCTTTATTGGGTaGGGACGTTCTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFFFFIG*GRSLDS Trigger: GGAGTCAAGAGAACGTCCTCACCCAATAAAGAAGAA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGATACTGTTTATGGACCCTGAGGTGGTTTTACCGATTCAGTCTCAGTTTTATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRYCLWTLRWFYRFSLSFINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...AAAACTGAGACTGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169938.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAACTGGGGTTTACCCTTaGGTCCCACACAGGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLTGVYP*VPHRQI Trigger: AATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGT...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGAAACCTCAGAAGCCTaGATGCTGGTCACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLETSEA*MLVTDA Trigger: AGCATCTGTGACCAGCATCCAGGCTTCTGAGGTTTC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTATGTAGGCTTTGGTGGTaGAGAAATGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLCRLWW*RNGWLC Trigger: ACACAGCCAGCCATTTCTCCACCACCAAAGCCTACA...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTCTTCTTTATTGGGTaGGGACGTTCTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCFFFIG*GRSLDS Trigger: GGAGTCAAGAGAACGTCCTCACCCAATAAAGAAGAA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGCTTTCACTGGAATTTaGTTGCGGTACAGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCAFTGI*LRYRNL Trigger: GAGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATCATGACCATCCGTGTTaGAACGGACACATTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: KYRLILLSVSKVYLSIDNHDHPC*NGHIVR Trigger: ACGTACAATGTGTCCGTTTCAACACGGATGGTCATG...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTATCGATCAACATGTCTTaGTGCAACACACAACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLSINMS*CNTQRI Trigger: GATGCGTTGTGTGTTGCACCAAGACATGTTGATCGA...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAAATAAAGAAGGTGAAGGTTTGTGAATTAGCAAGACAAGACTGCTTGTGTTTCTTCTTTATTGGGTaGGGACGTTCTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKIKKVKVCELARQDCLCFFFIG*GRSLDS Trigger: GGAGTCAAGAGAACGTCCTCACCCAATAAAGAAGAA...ACACAAGCAGTCTTGTCTTGCTAATTCACAAACCTTCACCTTCTTTATTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTCTTCACATGCATTGCTaGAATCTTCATATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCLHMHC*NLHIQL Trigger: GAGTTGGATATGAAGATTGCAGCAATGCATGTGAAG...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTCTCTTCACATGCATTaGTGCAATCTTCATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFSLHMH*CNLHIQ Trigger: TTGGATATGAAGATTGCAGCAATGCATGTGAAGAGA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAATCAACATGTCTTGGTaGAACACACAACGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPPISSFPFFLSFLCLINMSW*NTQRIN Trigger: ATTGATGCGTTGTGTGTTGCACCAAGACATGTTGAT...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTGCTTTCTCTTCACATaGATTGCTGCAATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPPISSFPFFLSFLCCFLFT*IAAIFI Trigger: TATGAAGATTGCAGCAATGCATGTGAAGAGAAAGCA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: QGREATKQLNPLSVRSSLRQSVS*GAAKLI Trigger: TATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCT...AAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CCCGTAAGGACTGGGCTGAGCTCGGTGTCCTCCTGCCCTTTCTGGGACAGAATGGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRTGLSSVSSCPFWDRMGFHWN*LAVQKP Trigger: AGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCC...CATTCTGTCCCAGAAAGGGCAGGAGGACACCGAGCTCAGCCCAGTCCTTACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGTGGCTGTGTGGCAGTTaGAGGAATGCTTTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQWLCGS*RNAFAR Trigger: TCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCA...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSRQSVS*GAAKLI Trigger: TATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCT...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCAACACACAACGCATCAATATCAGCACCTTTCGTGTGGACTCCTAGTCTGAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GATHNASISAPFVWTPSLRQSVS*GAAKLI Trigger: TATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCT...CAGACTAGGAGTCCACACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164326.8 |
||
| CDS-3UTR CAA 90 bp | TTCACTGGAATTTGCTTGCGGTACAGAAACCTCAGAAGCCTGGATGCTGGTCACAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FTGICLRYRNLRSLDAGHRQSVS*GAAKLI Trigger: TATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCT...GTGACCAGCATCCAGGCTTCTGAGGTTTCTGTACCGCAAGCAAATTCCAGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166329.8 ENSMUST00000169938.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGCAGCAGCTGATGGAGTaGCTTTCTCTTCACATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQQQLME*LSLHMH Trigger: ATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQGFHWN*LAVQKP Trigger: AGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGTTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGTTCTAGCCATGGGACCAAAGTTAGTGTCTGTGTCACGCAGCCACAGGTGGCTGTGTGGCAGTTaGAGGAATGCTTTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SQVLAMGPKLVSVSRSHRWLCGS*RNAFAR Trigger: TCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCA...CCTGTGGCTGCGTGACACAGACACTAACTTTGGTCCCATGGCTAGAACTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGGACTTTCTTCTTTATaGGGTGAGGACGTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQGLSSL*GEDVLL Trigger: CAAGAGAACGTCCTCACCCAATAAAGAAGAAAGTCC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GREATKQLNPLSVRSSLVFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GREATKQLNPLSVRSSLVLIEPH*SPDQLV Trigger: AACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAG...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS TCA 90 bp | TTTGACCTGAGAGGCCAACAGAGAAGCCGATGCCGGAACAGTTTCTaGTTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FDLRGQQRSRCRNSF*LNRTCLQINLFLCL Trigger: GAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTTCTCTGTTGGCCTCTCAGGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GREATKQLNPLSVRSSLVCDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATATGGCTGTGTGGCAGTTaGAGGAATGCTTTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIWLCGS*RNAFAR Trigger: TCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCA...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGAGCCCAAGGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGATCAACTTGTTCCTTaGTCTCTGTTTTATCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRQGGHQTAKPTVSQDQLVP*SLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATC...CTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCCTTGGGCTCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTCGCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CSTQRRDPDVSYGYKHSSLIEPH*SPDQLV Trigger: AACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAG...CGAGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFRQSVS*GAAKLI Trigger: TATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCT...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGAGGCCACCAAACAGCTAAACCCACTGTCAGTCAGGTCTAGTCTTGTCGATCAACTTGTTCCTTaGTCTCTGTTTTATCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GREATKQLNPLSVRSSLVDQLVP*SLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATC...GACAAGACTAGACCTGACTGACAGTGGGTTTAGCTGTTTGGTGGCCTCCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 |
||
| CDS-3UTR CAA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATATTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NNAAHRGAIRMSVMDTNIFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTGTGTGCATATGGAACTGTCCCAGCCAACACTAACGCTAGTCAATTACCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TACVHMELSQPTLTLVNYLIEPH*SPDQLV Trigger: AACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAG...GTAATTGACTAGCGTTAGTGTTGGCTGGGACAGTTCCATATGCACACAAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR CAA 90 bp | AATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATAGCTTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: NAAHRGAIRMSVMDTNIACDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...AGCTATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000170002.8 |
||
| CDS TCA 90 bp | AGGGATATCAGAAAGGTCTGTACTGGATGTTTTCGGAACAGTTTCTaGTTGAACCGCACTTGTCTCCAGATCAACTTGTTCCTTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDIRKVCTGCFRNSF*LNRTCLQINLFLCL Trigger: GAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGAAAACATCCAGTACAGACCTTTCTGATATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166471.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTCAGCAGCTGATGGAGTaGCTTTCTCTTCACATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFQQLME*LSLHMH Trigger: ATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTATGGCTGTGTGGCAGTTaGAGGAATGCTTTCGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLVPPISSFPFFLSFLCLWLCGS*RNAFAR Trigger: TCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCA...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTAACAAAGAGTTTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHTKICCYRSVLPRLTKSFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...ACTCTTTGTTAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATTACAGCAGCTGATGGAGTaGCTTTCTCTTCACATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KNHAHTKICCYRSVLPRLQQLME*LSLHMH Trigger: ATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG...TAATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CAA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVPPISSFPFFLSFLCGFHWN*LAVQKP Trigger: AGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCC...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAAACCATGCTCATACAAAGATCTGCTGCTACAGGTCTGTTTTACCCAGATGGACTTTCTTCTTTATaGGGTGAGGACGTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKTMLIQRSAATGLFYPDGLSSL*GEDVLL Trigger: CAAGAGAACGTCCTCACCCAATAAAGAAGAAAGTCC...ATCTGGGTAAAACAGACCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGGACTTTCTTCTTTATaGGGTGAGGACGTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFGLSSL*GEDVLL Trigger: CAAGAGAACGTCCTCACCCAATAAAGAAGAAAGTCC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | AACAATGCAGCACACAGAGGCGCGATCCGGATGTCAGTTATGGATACAAACATATCATCCTCTTCTGTTTaGGTTTTCTTAGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NNAAHRGAIRMSVMDTNISSSSV*VFLGLS Trigger: AGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGA...TATGTTTGTATCCATAACTGACATCCGGATCGCGCCTCTGTGTGCTGCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109901.9 |
||
| CDS-3UTR CAA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTACAGCAGCTGATGGAGTaGCTTTCTCTTCACATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLVPPISSFPFFLSFLCLQQLME*LSLHMH Trigger: ATGCATGTGAAGAGAAAGCAACTCCATCAGCTGCTG...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTAGGCTTTCACTGGAATTaGCTTGCGGTACAGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVPPISSFPFFLSFLCLGFHWN*LAVQKP Trigger: AGGTTTCTGTACCGCAAGCAAATTCCAGTGAAAGCC...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVPPISSFPFFLSFLCLIEPH*SPDQLV Trigger: AACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAG...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTGTGATAGCAAGACCTaGTTTAAACTCCTCAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFCDSKT*FKLLNH Trigger: ATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | CCAACACTAACGCTAGTCAATTACTCTAAGGAGTTATTGACTGTCTACAGAATAGGACTTTCTTCTTTATaGGGTGAGGACGTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLTLVNYSKELLTVYRIGLSSL*GEDVLL Trigger: CAAGAGAACGTCCTCACCCAATAAAGAAGAAAGTCC...TATTCTGTAGACAGTCAATAACTCCTTAGAGTAATTGACTAGCGTTAGTGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR CAA 90 bp | AATACAATGAAAATCTCTCTGAGCCTTGCACACAGGTCCGGAACACTGTTTGTTGATCAACTTGTTCCTTaGTCTCTGTTTTATCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTMKISLSLAHRSGTLFVDQLVP*SLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATC...AACAAACAGTGTTCCGGACCTGTGTGCAAGGCTCAGAGAGATTTTCATTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTTACTGATTGAACCGCACTaGTCTCCAGATCAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLVPPISSFPFFLSFLCLLIEPH*SPDQLV Trigger: AACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAG...TAAACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGTTGTCTCCAGATCAACTaGTTCCTCTTCTGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVPPISSFPFFLSFLCCLQIN*FLFCFG Trigger: ACCAAAACAGAAGAGGAACAAGTTGATCTGGAGACA...ACAAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170002.8 |
||
| CDS-3UTR CAA 90 bp | AAGTATCGCCTAATTCTTCTTTCAGTGTCCAAAGTATACCTTAGCATTGACAATTTCGATCAACATGTCTaGGTGCAACACACAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KYRLILLSVSKVYLSIDNFDQHV*VQHTTH Trigger: ATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAA...ATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAATTAGGCGATACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109901.9 ENSMUST00000169938.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTTCATCCTCTTCTGTTTaGGTTTTCTTAGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFSSSSV*VFLGLS Trigger: AGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGA...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTCTTGTCCCTCCAATCTCCTCTTTTCCTTTCTTTCTTTCTTTCCTTTGATCAACTTGTTCCTTaGTCTCTGTTTTATCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLVLSLQSPLFLSFFLSFDQLVP*SLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATC...AAAGGAAAGAAAGAAAGAAAGGAAAAGAGGAGATTGGAGGGACAAGACTAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000166471.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAAAGAAGGTGAAGGTTTGTGAATTAGCAAGACAAGACTGCTTGTGTGCATCATCCTCTTCTGTTTaGGTTTTCTTAGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KIKKVKVCELARQDCLCASSSSV*VFLGLS Trigger: AGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGA...TGCACACAAGCAGTCTTGTCTTGCTAATTCACAAACCTTCACCTTCTTTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172089.2 |
||
| CDS CAA 72 bp | TCGATGAGCTTCTGTGTGAGTAGGCAGTCAGTCTCCTaGGGGGCCGCTAAGCTGATAGGAGAGGTAATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SMSFCVSRQSVS*GAAKLIGEVMP Trigger: TGGCATTACCTCTCCTATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCTACTCACACAGAAGCTCATCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000021535.14 ENSMUST00000109901.9 ENSMUST00000163473.8 ENSMUST00000164326.8 ENSMUST00000166329.8 ENSMUST00000166735.8 ENSMUST00000168186.8 ENSMUST00000169938.8 ENSMUST00000170002.8 |
||
| CDS TCA 72 bp | GCCAACAGAGAAGCCGATGCCGGAACAGTTTCTGATTaGACCGCACTTGTCTCCAGATCAACTTGTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ANREADAGTVSD*TALVSRSTCSS Trigger: AGAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTTCTCTGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170002.8 |
||
| CDS CAA 72 bp | AAGCCGATGCCGGAACAGTTTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTTCCTCTTCTGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KPMPEQFLIEPH*SPDQLVPLLFW Trigger: CCAAAACAGAAGAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGGCATCGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170002.8 |
||
| CDS TCA 72 bp | AGGTCTGTACTGGATGTTTTCGGAACAGTTTCTGATTaGACCGCACTTGTCTCCAGATCAACTTGTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSVLDVFGTVSD*TALVSRSTCSF Trigger: AAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGAAAACATCCAGTACAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166471.8 |
||
| CDS TCA 72 bp | AGAAAGGTCTGTACTGGATGTTTTCGGAACAGTTTCTaGTTGAACCGCACTTGTCTCCAGATCAACTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RKVCTGCFRNSF*LNRTCLQINLF Trigger: GAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGAAAACATCCAGTACAGACCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166471.8 |
||
| CDS CAA 90 bp | GGTCTGTACTGGATGTTTTCGGAACAGTTTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTTTATCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLYWMFSEQFLIEPH*SPDQLVPLSLFYHV Trigger: GACATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGAAAACATCCAGTACAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166471.8 |
||
| CDS CAA 72 bp | TGGATGTTTTCGGAACAGTTTCTGATTGAACCGCACTaGTCTCCAGATCAACTTGTTCCTTTGTCTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: WMFSEQFLIEPH*SPDQLVPLSLF Trigger: AAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTTCCGAAAACATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166471.8 |
||