Pregenerated sensors for PAOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025464Ensembl transcript IDs: ENSMUST00000026537.13, ENSMUST00000097967.4, ENSMUST00000209908.2, ENSMUST00000211757.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGGGCTGTGTCCTGTAAGGGCGATGTATCTTCCCACACCACCTaGATGAACTGGCAGTCGGGCTCCCAGAAGGGCTCTTCAAACTCC | + |
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Preference number: 1 (lower is better) Translates to: ERAVSCKGDVSSHTT*MNWQSGSQKGSSNS Trigger: GGAGTTTGAAGAGCCCTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGGAAGATACATCGCCCTTACAGGACACAGCCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
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| 3UTR GCA 90 bp | AGTACCATGCTGTGCAAGGATGGGACAAGCTGGGACAAGCGTCTCTaGAAACTCTTCGAGCTCCCTCTGGAGCTCCACCCTTTTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: STMLCKDGTSWDKRL*KLFELPLELHPFET Trigger: TGTCTCAAAAGGGTGGAGCTCCAGAGGGAGCTCGAAGAGTTTGCAGAGACGCTTGTCCCAGCTTGTCCCATCCTTGCACAGCATGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 90 bp | AGCAGAGACAGGACATGGAATGGGTGGAACAGGTTGAGAACTGGATaGACTATGAGAAGTACTCTAGGGCTGCAGAGATGGCTCAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SRDRTWNGWNRLRTG*TMRSTLGLQRWLSG Trigger: ACCACTGAGCCATCTCTGCAGCCCTAGAGTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 90 bp | GTAAGACTAAATGCAAATCCAGCTGCTCCTGGTAGAACAGGCCTGTaGTACCAGCTAAGGATGATAGAGGCCAGGGGAAGCCAGGCATTA | + |
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Preference number: 1 (lower is better) Translates to: VRLNANPAAPGRTGL*YQLRMIEARGSQAL Trigger: TAATGCCTGGCTTCCCCTGGCCTCTATCATCCTTAGCTGGTATCACAGGCCTGTTCTACCAGGAGCAGCTGGATTTGCATTTAGTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | ATGATCAAAGGAAGATTCATTAGCCATAGTCCTGGACAACAGCTGTaGGGAACCCTGGGAACGCCTCCAATAACAGGACAAAGGGCAACC | + |
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Preference number: 1 (lower is better) Translates to: MIKGRFISHSPGQQL*GTLGTPPITGQRAT Trigger: GGTTGCCCTTTGTCCTGTTATTGGAGGCGTTCCCAGGGTTCCCCACAGCTGTTGTCCAGGACTATGGCTAATGAATCTTCCTTTGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 90 bp | ACTCAATGTTATAATGGTTGCCTTGAATGCAGGAAGCCTTGGGTTTaGTACCCAGTACTACTATCACCCCCAGGCCTCCAGACAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: TQCYNGCLECRKPWV*YPVLLSPPGLQTGT Trigger: TGTGCCTGTCTGGAGGCCTGGGGGTGATAGTAGTACTGGGTATCAAACCCAAGGCTTCCTGCATTCAAGGCAACCATTATAACATTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | AGAGGAAAGCCATGGACTAGGGATAGAAGGAGCAGAGACAGGACATaGAATGGGTGGAACAGGTTGAGAACTGGATGCACTATGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: RGKPWTRDRRSRDRT*NGWNRLRTGCTMRS Trigger: ACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCTCTGCTCCTTCTATCCCTAGTCCATGGCTTTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | TGGATGCACTATGAGAAGTACTCTAGGGCTGCAGAGATGGCTCAGTaGTTAAAAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCGAAT | + |
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Preference number: 1 (lower is better) Translates to: WMHYEKYSRAAEMAQ*LKALTALLKVLSSN Trigger: ATTCGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTGCAGCCCTAGAGTACTTCTCATAGTGCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | AGCATGCCCAAGATTCTAGGGTTTCATAGGGAAGCCAGAAGAAATTaGGCTGCTGGCAATGAAGATGTGGCTTCTCCATGGTGGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: SMPKILGFHREARRN*AAGNEDVASPWWEI Trigger: AATTTCCCACCATGGAGAAGCCACATCTTCATTGCCAGCAGCCCAATTTCTTCTGGCTTCCCTATGAAACCCTAGAATCTTGGGCATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | GGATCCTCTGGACCTGGAATTACAGGGGCTTTTGAGTTGTTTGACTaGGTGCTGAGAATTGAACTTCAGTCCTGTGCAATAGCAGCAATC | + |
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Preference number: 1 (lower is better) Translates to: GSSGPGITGAFELFD*VLRIELQSCAIAAI Trigger: GATTGCTGCTATTGCACAGGACTGAAGTTCAATTCTCAGCACCCAGTCAAACAACTCAAAAGCCCCTGTAATTCCAGGTCCAGAGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCAAGTCTAATGGGCCTCTCTTTCCAGTaGTGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LGHIKFASLMGLSFQ*WPTGPSFDTYAARD Trigger: GTCTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGAGGCCCATTAGACTTGCAAACTTTATATGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 90 bp | AATCAATGTAAGGAAATTGAGTTGTCCCCTATCAGTTCCCGGGCCTaGCTTAGAACTTTCAAGTGTTACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: NQCKEIELSPISSRA*LRTFKCYTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTAACACTTGAAAGTTCTAAGGCAGGCCCGGGAACTGATAGGGGACAACTCAATTTCCTTACATTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 90 bp | CATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGTTCCTTaGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCTTTATATTTTT | + |
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Preference number: 1 (lower is better) Translates to: HIVVPPIGLQFPLVP*VLSLAPPLGALYIF Trigger: AAAAATATAAAGGGCCCCCAATGGAGGAGCTAGAGAAAGCACCCAAGGAACTAAAGGGAACTGCAACCCTATAGGTGGAACAACAATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 90 bp | GTCCCAATCTGGAGATTTTTCACTATATTCCAAATCTTTCAGGTTTaGGGATATATAGCATGGAGGATAACAAGCTGGCCTGGCCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: VPIWRFFTIFQIFQV*GYIAWRITSWPGLA Trigger: TGCTAGGCCAGGCCAGCTTGTTATCCTCCATGCTATATATCCTCAAACCTGAAAGATTTGGAATATAGTGAAAAATCTCCAGATTGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 90 bp | ATTAGAAACTACCCTAAGAGAGACACTATCTCAAATAAAAGGGGTTaGCATGTAACTCAATGTTATAATGGTTGCCTTGAATGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: IRNYPKRDTISNKRG*HVTQCYNGCLECRK Trigger: CTTCCTGCATTCAAGGCAACCATTATAACATTGAGTTACATGTCAACCCCTTTTATTTGAGATAGTGTCTCTCTTAGGGTAGTTTCTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CAA 90 bp | TCTCCCAAATCCCCAAGCCAGGTCAGGATAGGCTGTGTCATCTCCTaGCCTCACGGTCTTCTCAGTTCTACAGGACCATTTAGCCTACCA | + |
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Preference number: 2 (lower is better) Translates to: SPKSPSQVRIGCVIS*PHGLLSSTGPFSLP Trigger: TGGTAGGCTAAATGGTCCTGTAGAACTGAGAAGACCGTGAGGCAAGGAGATGACACAGCCTATCCTGACCTGGCTTGGGGATTTGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGACAAGCAGGAGGGCTTaGCCTCAGCCATGCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: SLSSDGLLGHLLIHMQLETSRRA*PQPCQT Trigger: GGTTTGGCATGGCTGAGGGCAAGCCCTCCTGCTTGT...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCAACAGACCTGTCCTCTGCAGCTGCTGTGACGACAATGAGACCAGACTAAGGACATGGAATGGGTaGAACAGGTTGAGAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: RSNRPVLCSCCDDNETRLRTWNG*NRLRTG Trigger: TCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCT...TAGTCTGGTCTCATTGTCGTCACAGCAGCTGCAGAGGACAGGTCTGTTGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CAA 90 bp | AGGGATAGAAGGAGCAGAGACAGGACATGGAATGGGTGGAACAGGTaGAGAACTGGATGCACTATGAGAAGTACTCTAGGGCTGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RDRRSRDRTWNGWNR*RTGCTMRSTLGLQR Trigger: TCTCTGCAGCCCTAGAGTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCTCTGCTCCTTCTATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CAA 90 bp | GAGCTGTTTCAAAAGTGTAAACATAACAAATACAAGCAGGAGGGCTaGCCCTCAGCCATGCCAAACCTGGGGCTAGTGACAGTACCATGC | + |
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Preference number: 2 (lower is better) Translates to: ELFQKCKHNKYKQEG*PSAMPNLGLVTVPC Trigger: GCATGGTACTGTCACTAGCCCCAGGTTTGGCATGGCTGAGGGCAAGCCCTCCTGCTTGTATTTGTTATGTTTACACTTTTGAAACAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CAA 90 bp | GAAGCCAGTGGATCCTCTGGACCTGGAATTACAGGGGCTTTTGAGTaGTTTGACTGGGTGCTGAGAATTGAACTTCAGTCCTGTGCAATA | + |
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Preference number: 2 (lower is better) Translates to: EASGSSGPGITGAFE*FDWVLRIELQSCAI Trigger: TATTGCACAGGACTGAAGTTCAATTCTCAGCACCCAGTCAAACAACTCAAAAGCCCCTGTAATTCCAGGTCCAGAGGATCCACTGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGAGCAGAGACAGGACATaGAATGGGTGGAACAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SLSSDGLLGHLLIHMQLESRDRT*NGWNRL Trigger: CAACCTGTTCCACCCATTCCATGTCCTGTCTCTGCT...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTAGTTAGTAGAGCTGGACTGGACTaGACAGAAGCAAGCCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSFDTYAARDKSSGVLVSRAGLD*TEASLE Trigger: CTCTAGGCTTGCTTCTGTCCAGTCCAGTCCAGCTCT...ACTAACTAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CAA 90 bp | GGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCTTTATATTTTTATTaGAAGTGTCTGTGTATGCCATGTGTTAGCGGATACGCCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GAFSSSSIGGPLYFY*KCLCMPCVSGYAQK Trigger: CTTCTGGGCGTATCCGCTAACACATGGCATACACAGACACTTCAAATAAAAATATAAAGGGCCCCCAATGGAGGAGCTAGAGAAAGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCATAGGGAAGCCAGAAGAAATTGGGCTGCTGGCAATGAAGATGTGGCTGAACAGGTTGAGAACTaGATGCACTATGAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: GFHREARRNWAAGNEDVAEQVEN*MHYEKY Trigger: GTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTC...AGCCACATCTTCATTGCCAGCAGCCCAATTTCTTCTGGCTTCCCTATGAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGAGACAGGACATGGAATaGGTGGAACAGGTTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLSSDGLLGHLLIHMQLERQDME*VEQVEN Trigger: GTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCT...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTAGTTAGTCAAGCCTTAAAGACCTaGAGGATGAGTAGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PSFDTYAARDKSSGVLVSQALKT*RMSSQA Trigger: TGCTTGGCTACTCATCCTTCAGGTCTTTAAGGCTTG...ACTAACTAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAAGCCATCTCTCCAGTCCCAATCTGGAGATTTTTCACTATATTCCAAATCAGAGAGGAAAGCCATaGACTAGGGATAGAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSHLSSPNLEIFHYIPNQRGKP*TRDRRS Trigger: GCTCCTTCTATCCCTAGTCCATGGCTTTCCTCTCTG...ATTTGGAATATAGTGAAAAATCTCCAGATTGGGACTGGAGAGATGGCTTGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGGAAGCCAGAAGAAATTaGGCTGCTGGCAATGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SLSSDGLLGHLLIHMQLEEARRN*AAGNED Trigger: ATCTTCATTGCCAGCAGCCCAATTTCTTCTGGCTTC...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGTACTGGCTTTCTTCCATGGTGTTGCAAGGGCAGCCTGGTGACATTAAAATCCATAATAAGATCTaGCACCCTCTTCTGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LEYWLSSMVLQGQPGDIKIHNKI*HPLLEC Trigger: ACACTCCAGAAGAGGGTGTCAGATCTTATTATGGAT...TTTAATGTCACCAGGCTGCCCTTGCAACACCATGGAAGAAAGCCAGTACTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGCAATGTTATAATGGTTaGCTTGAATGCAGGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLSSDGLLGHLLIHMQLEQCYNG*LECRKP Trigger: AGGCTTCCTGCATTCAAGGCAACCATTATAACATTG...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 72 bp | CTGTGCAAGGATGGGACAAGCTGGGACAAGCGTCTCTaGAAACTCTTCGAGCTCCCTCTGGAGCTCCACCCT | + |
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Preference number: 3 (lower is better) Translates to: LCKDGTSWDKRL*KLFELPLELHP Trigger: AGGGTGGAGCTCCAGAGGGAGCTCGAAGAGTTTGCAGAGACGCTTGTCCCAGCTTGTCCCATCCTTGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 72 bp | CATGCCAAACCTGGGGCTAGTGACAGTACCATGCTGTaGAAGGATGGGACAAGCTGGGACAAGCGTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: HAKPGASDSTML*KDGTSWDKRLC Trigger: GCAGAGACGCTTGTCCCAGCTTGTCCCATCCTTGCACAGCATGGTACTGTCACTAGCCCCAGGTTTGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 72 bp | TCAGCCATGCCAAACCTGGGGCTAGTGACAGTACCATaGTGTGCAAGGATGGGACAAGCTGGGACAAGCGTC | + |
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Preference number: 3 (lower is better) Translates to: SAMPNLGLVTVP*CARMGQAGTSV Trigger: GACGCTTGTCCCAGCTTGTCCCATCCTTGCACAGCATGGTACTGTCACTAGCCCCAGGTTTGGCATGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | GGCCCTAAGGCCCAAAGGACCCAGAGAGGAAAGCCATaGACTAGGGATAGAAGGAGCAGAGACAGGACATGG | + |
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Preference number: 3 (lower is better) Translates to: GPKAQRTQRGKP*TRDRRSRDRTW Trigger: CCATGTCCTGTCTCTGCTCCTTCTATCCCTAGTCCATGGCTTTCCTCTCTGGGTCCTTTGGGCCTTAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | CCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTaGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PVRSPNLKPNRA*SAQVVEQSSRH Trigger: GTGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| 3UTR GCA 72 bp | GCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTaGAAGTCTAATGGGCCTCTCTTTCCAGTGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: ALAFPCTGAYKV*KSNGPLFPVMA Trigger: GGCCATCACTGGAAAGAGAGGCCCATTAGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 72 bp | GGCAAGCCTGTCCCCCGTCCCGCAAAGTCACTCCTCTaGAAACTGAAATGTGTCCCTGAGTGTCAACAACAA | + |
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Preference number: 3 (lower is better) Translates to: GKPVPRPAKSLL*KLKCVPECQQQ Trigger: TTGTTGTTGACACTCAGGGACACATTTCAGTTTTCAGAGGAGTGACTTTGCGGGACGGGGGACAGGCTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 72 bp | AATGCAAATCCAGCTGCTCCTGGTAGAACAGGCCTGTaGTACCAGCTAAGGATGATAGAGGCCAGGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: NANPAAPGRTGL*YQLRMIEARGS Trigger: GCTTCCCCTGGCCTCTATCATCCTTAGCTGGTATCACAGGCCTGTTCTACCAGGAGCAGCTGGATTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGTTCCCTTTAGTTCCTTaGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQFPLVP*VLSLAPPLGAL Trigger: AAGGGCCCCCAATGGAGGAGCTAGAGAAAGCACCCAAGGAACTAAAGGGAACTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR-3UTR CAA 90 bp | TGTATCTTCCCACACCACCTGGATGAACTGGCAGTCGGGCTCCCAGAAGGGCTCTCCAAGAAGATTTTGTaGTTGGTACCAAAGCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: CIFPHHLDELAVGLPEGLSKKIL*LVPKPS Trigger: ACTAGGCTTTGGTACCAACAACAAAATCTTCTTGGA...GAGCCCTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGGAAGATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
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| 3UTR CCA 72 bp | GGAAGATTCATTAGCCATAGTCCTGGACAACAGCTGTaGGGAACCCTGGGAACGCCTCCAATAACAGGACAA | + |
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Preference number: 3 (lower is better) Translates to: GRFISHSPGQQL*GTLGTPPITGQ Trigger: TTGTCCTGTTATTGGAGGCGTTCCCAGGGTTCCCCACAGCTGTTGTCCAGGACTATGGCTAATGAATCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | GGGACAAGCGTCTCTGCAAACTCTTCGAGCTCCCTCTaGAGCTCCACCCTTTTGAGACAATATCTCACTAGA | + |
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Preference number: 3 (lower is better) Translates to: GTSVSANSSSSL*SSTLLRQYLTR Trigger: TCTAGTGAGATATTGTCTCAAAAGGGTGGAGCTCCAGAGGGAGCTCGAAGAGTTTGCAGAGACGCTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | TTTAAAGTCCTAGGTCTGTCAAGGCAGTCTCCATCATaGAAGAGCCCCAACCCATCCCTAGCAGCTCAGATC | + |
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Preference number: 3 (lower is better) Translates to: FKVLGLSRQSPS*KSPNPSLAAQI Trigger: GATCTGAGCTGCTAGGGATGGGTTGGGGCTCTTCCATGATGGAGACTGCCTTGACAGACCTAGGACTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR TCA 72 bp | CAAACTCTTCGAGCTCCCTCTGGAGCTCCACCCTTTTaGGACAATATCTCACTAGATAGGCTCGCTACACCA | + |
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Preference number: 3 (lower is better) Translates to: QTLRAPSGAPPF*DNISLDRLATP Trigger: TGGTGTAGCGAGCCTATCTAGTGAGATATTGTCTCAAAAGGGTGGAGCTCCAGAGGGAGCTCGAAGAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 72 bp | GGCTGCAGAGATGGCTCAGTGGTTAAAAGCACTGACTaGTCTTCTGAAGGTCCTGAGTTCGAATCCCAACAA | + |
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Preference number: 3 (lower is better) Translates to: GCRDGSVVKSTD*SSEGPEFESQQ Trigger: TTGTTGGGATTCGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR GCA 72 bp | AGGACATGGAATGGGTGGAACAGGTTGAGAACTGGATaGACTATGAGAAGTACTCTAGGGCTGCAGAGATGG | + |
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Preference number: 3 (lower is better) Translates to: RTWNGWNRLRTG*TMRSTLGLQRW Trigger: CCATCTCTGCAGCCCTAGAGTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| 3UTR CCA 72 bp | AGACAGGACATGGAATGGGTGGAACAGGTTGAGAACTaGATGCACTATGAGAAGTACTCTAGGGCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RQDMEWVEQVEN*MHYEKYSRAAE Trigger: CTCTGCAGCCCTAGAGTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAGTCTCCATAAACTCCGACTCCAGCCCAGCAATAAACCCACAGAGCACAAATCCAATGAGCTTCTaGAACCAGGTGTCTTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DRVSINSDSSPAINPQSTNPMSF*NQVSWS Trigger: ACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATT...TGTGCTCTGTGGGTTTATTGCTGGGCTGGAGTCGGAGTTTATGGAGACTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| 3UTR TCA 72 bp | CTGTCCCCCGTCCCGCAAAGTCACTCCTCTGAAAACTaGAATGTGTCCCTGAGTGTCAACAACAAAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSPVPQSHSSEN*NVSLSVNNKDF Trigger: AAAGTCTTTGTTGTTGACACTCAGGGACACATTTCAGTTTTCAGAGGAGTGACTTTGCGGGACGGGGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR CCA 72 bp | TATGAGAAGTACTCTAGGGCTGCAGAGATGGCTCAGTaGTTAAAAGCACTGACTGCTCTTCTGAAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YEKYSRAAEMAQ*LKALTALLKVL Trigger: CAGGACCTTCAGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTGCAGCCCTAGAGTACTTCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGTACTGGCTTTCTTCCATGGTGTTGCAAGGGCAGCCTGGTGACATTAAAAATGGGTGGAACAGGTaGAGAACTGGATGCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: LEYWLSSMVLQGQPGDIKNGWNR*RTGCTM Trigger: CATAGTGCATCCAGTTCTCAACCTGTTCCACCCATT...TTTAATGTCACCAGGCTGCCCTTGCAACACCATGGAAGAAAGCCAGTACTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGCCATCTCTCCAGTCCCAATCTGGAGATTTTTCACTATATTCCAAATCTCTTTCTTCCATGGTGTaGCAAGGGCAGCCTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKPSLQSQSGDFSLYSKSLSSMV*QGQPGD Trigger: GTCACCAGGCTGCCCTTGCAACACCATGGAAGAAAG...AGATTTGGAATATAGTGAAAAATCTCCAGATTGGGACTGGAGAGATGGCTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR-3UTR CAA 90 bp | CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTAGTTAGTGTTCCCTTTAGTTCCTaGGGTGCTTTCTCTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSFDTYAARDKSSGVLVSVPFSS*GAFSSS Trigger: GGAGCTAGAGAAAGCACCCAAGGAACTAAAGGGAAC...ACTAACTAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR TCA 72 bp | CGACTCCAGCCCAGCAATAAACCCACAGAGCACATGTaGAGACTCAAAAGAAGGCTGGACCAAAAATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RLQPSNKPTEHM*RLKRRLDQKSN Trigger: ATTGGATTTTTGGTCCAGCCTTCTTTTGAGTCTTCACATGTGCTCTGTGGGTTTATTGCTGGGCTGGAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| 3UTR GCA 72 bp | AAGGAAATTGAGTTGTCCCCTATCAGTTCCCGGGCCTaGCTTAGAACTTTCAAGTGTTACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KEIELSPISSRA*LRTFKCYTHTH Trigger: GTGTGTGTGTGTGTAACACTTGAAAGTTCTAAGGCAGGCCCGGGAACTGATAGGGGACAACTCAATTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR CCA 72 bp | AAGATTCTAGGGTTTCATAGGGAAGCCAGAAGAAATTaGGCTGCTGGCAATGAAGATGTGGCTTCTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: KILGFHREARRN*AAGNEDVASPW Trigger: CCATGGAGAAGCCACATCTTCATTGCCAGCAGCCCAATTTCTTCTGGCTTCCCTATGAAACCCTAGAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR CCA 72 bp | GGACCTGGAATTACAGGGGCTTTTGAGTTGTTTGACTaGGTGCTGAGAATTGAACTTCAGTCCTGTGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GPGITGAFELFD*VLRIELQSCAI Trigger: TATTGCACAGGACTGAAGTTCAATTCTCAGCACCCAGTCAAACAACTCAAAAGCCCCTGTAATTCCAGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR TCA 72 bp | ATAAAGTTTGCAAGTCTAATGGGCCTCTCTTTCCAGTaGTGGCCTACTGGGCCATCTTTTGATACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFASLMGLSFQ*WPTGPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGAGGCCCATTAGACTTGCAAACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR TCA 72 bp | TGGAGATTTTTCACTATATTCCAAATCTTTCAGGTTTaGGGATATATAGCATGGAGGATAACAAGCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WRFFTIFQIFQV*GYIAWRITSWP Trigger: AGGCCAGCTTGTTATCCTCCATGCTATATATCCTCAAACCTGAAAGATTTGGAATATAGTGAAAAATCTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCACGCCCAGCCCCGCGATaGCGCTGCCCACCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTSNQTELGQPKWWSRARPAPR*RCPPPA Trigger: TGCTGGTGGTGGGCAGCGGCATCGCGGGGCTGGGCG...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCGCCCAGCCCCGCGATaGCGCTGCCCACCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRRPAPR*RCPPPA Trigger: TGCTGGTGGTGGGCAGCGGCATCGCGGGGCTGGGCG...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR TCA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCACCCACACCACCTGGATaGACTGGCAGTCGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQTKQSLVSPSGGAEQQAPTPPG*TGSRAP Trigger: GGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGG...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGCAACCATGGGCCCTAAGGCCCAAAGGACCCAGAGAGGAAAGCCATGGGAGCCACCAGGTCCATaGTGTGGGTGCCGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QRATMGPKAQRTQRGKPWEPPGP*CGCRSH Trigger: GTGTGAGCGGCACCCACAGCATGGACCTGGTGGCTC...CCATGGCTTTCCTCTCTGGGTCCTTTGGGCCTTAGGGCCCATGGTTGCCCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | GTATCTTCCCACACCACCTGGATGAACTGGCAGTCGGGCTCCCAGAAGGGCTCTCTGCTGTGTCAGGGTTaGGTTGGAGGAGAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSHTTWMNWQSGSQKGSLLCQG*VGGEGP Trigger: TGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAG...AGAGCCCTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGGAAGATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR CCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCAGAACCCGCAGGTGTaGAGCAGCCCGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRQNPQV*SSPVAA Trigger: TGCAGCCACCGGGCTGCTCCACACCTGCGGGTTCTG...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | CAACCATGGGCCCTAAGGCCCAAAGGACCCAGAGAGGAAAGCCATGGACTAGGGGGTCCATGCTGTGGGTaGCGCTCACACAACACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QPWALRPKGPREESHGLGGPCCG*RSHNTL Trigger: TAGAGTGTTGTGTGAGCGGCACCCACAGCATGGACC...CCCTAGTCCATGGCTTTCCTCTCTGGGTCCTTTGGGCCTTAGGGCCCATGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCAACCACCTGGATGAACTaGCAGTCGGGCTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQTKQSLVSPSGGAEQQATTWMN*QSGSQK Trigger: CTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGT...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACCTGGCTCCCCAGCACCCTTACTCCATATTCTCTCATTCACCACGCCCAGGAGCCCGAATTCTaGAGCCAGCTGGAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTWLPSTLTPYSLIHHAQEPEF*SQLEDR Trigger: CCTGTCTTCCAGCTGGCTGCAGAATTCGGGCTCCTG...GGCGTGGTGAATGAGAGAATATGGAGTAAGGGTGCTGGGGAGCCAGGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGGTCATCGCCAGTGCTaGCCACAGCCACATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTSNQTELGQPKWWSRAGHRQC*PQPHSC Trigger: ACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACC...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGGGTCATCGCCAGTGCTaGCCACAGCCACATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRGHRQC*PQPHSC Trigger: ACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACC...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCATCCTGGGAGGGCCCATaGATCCAGTGTGCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPKPQTKQSLVSPSGGASWEGP*IQCAPS Trigger: GCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGA...TGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCAAAGACAGGATTGTCCTaGGAGGGCCCATGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQTKQSLVSPSGGAEQQAKTGLS*EGPWIQ Trigger: CTGGATCCATGGGCCCTCCCAGGACAATCCTGTCTT...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGCCATGCCAAACCTGGGGCTAGTGACAGTACCATGCTGTGCAAGGATGCCAGCAAAGAGTACCTaGAGCTGGGTGCCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAMPNLGLVTVPCCARMPAKST*SWVPVP Trigger: TGGAACTGGCACCCAGCTCCAGGTACTCTTTGCTGG...CATCCTTGCACAGCATGGTACTGTCACTAGCCCCAGGTTTGGCATGGCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCACCAGCAAAGAGTACCTaGAGCTGGGTGCCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTKQSLVSPSGGAEQQAPAKST*SWVPVP Trigger: TGGAACTGGCACCCAGCTCCAGGTACTCTTTGCTGG...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR TCA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCATCTTCAGGGAGGGGCTaGGCCATCAGATCTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTSNQTELGQPKWWSRASSGRG*AIRSRS Trigger: TGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAGA...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAACAGACCTGTCCTCTGCAGCTGCTGTGACGACAATGAGACCAGACTAAGCCACCAGCCAAGATaGAATCCAGCCCAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNRPVLCSCCDDNETRLSHQPR*NPAQAA Trigger: TGCTGCCTGGGCTGGATTGCATCTTGGCTGGTGGCT...TAGTCTGGTCTCATTGTCGTCACAGCAGCTGCAGAGGACAGGTCTGTTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGGTACCTGGAGCTGGGTaGCAGTTCCATCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKPQTKQSLVSPSGGAEQVPGAG*QFHLQG Trigger: TCCCTGAAGATGGAACTGGCACCCAGCTCCAGGTAC...CTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGTACCTGGAGCTGGGTaGCAGTTCCATCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTSNQTELGQPKWWSRAVPGAG*QFHLQG Trigger: TCCCTGAAGATGGAACTGGCACCCAGCTCCAGGTAC...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | CTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGTGTGGAGCAGCCCGGTaGCTGCAGAGCTTCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVRSPNLKPNRAWSAQVCGAAR*LQSFCA Trigger: TGCGCAGAAGCTCTGCAGCCACCGGGCTGCTCCACA...CACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGCAACCATGGGCCCTAAGGCCCAAAGGACCCAGAGAGGAAAGCCATGGAATTCTGCAGCCAGCTaGAAGACAGGATTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRATMGPKAQRTQRGKPWNSAAS*KTGLSW Trigger: CCAGGACAATCCTGTCTTCCAGCTGGCTGCAGAATT...CCATGGCTTTCCTCTCTGGGTCCTTTGGGCCTTAGGGCCCATGGTTGCCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGCCATGCCAAACCTGGGGCTAGTGACAGTACCATGCTGTGCAAGGATGCACTTGTTCCAGAGCTaGACCAGATCATGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAMPNLGLVTVPCCARMHLFQS*TRSWRA Trigger: TGCCCTCCATGATCTGGTCCAGCTCTGGAACAAGTG...CATCCTTGCACAGCATGGTACTGTCACTAGCCCCAGGTTTGGCATGGCTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCACATCTACCACACACACCTGGCTCCCCAGCACCCTTACTCCATATTCACCAGGTCCATGCTGTaGGTGCCGCTCACACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TPHIYHTHLAPQHPYSIFTRSML*VPLTQH Trigger: GTGTTGTGTGAGCGGCACCCACAGCATGGACCTGGT...GAATATGGAGTAAGGGTGCTGGGGAGCCAGGTGTGTGTGGTAGATGTGAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCACATCTACCACACACACCTGGCTCCCCAGCACCCTTACTCCATATTCACCACCTGGATGAACTaGCAGTCGGGCTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPHIYHTHLAPQHPYSIFTTWMN*QSGSQK Trigger: CTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGT...GAATATGGAGTAAGGGTGCTGGGGAGCCAGGTGTGTGTGGTAGATGTGAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAATCCAATGAGCTTCTTGAACCAGGTGTCTTGGAGTGAGAGGGCTGTGGAGAGGGCCCAAGCCTaGGCCTTACAAGCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKNPMSFLNQVSWSERAVERAQA*ALQAQP Trigger: TGGCTGGGCTTGTAAGGCTCAGGCTTGGGCCCTCTC...CACAGCCCTCTCACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATTTTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR CCA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACCAGAACCCGCAGGTGTaGAGCAGCCCGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGASMIRPSQTPTDKKNQNPQV*SSPVAA Trigger: TGCAGCCACCGGGCTGCTCCACACCTGCGGGTTCTG...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCATACGCTCTTGGCTGCTaGCAATTGTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTKQSLVSPSGGAEQQAYALGC*QLWVSC Trigger: ACAGGAAACCCACAATTGCCAGCAGCCAAGAGCGTA...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| 3UTR CAA 72 bp | ACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTaGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSKIPKPQTKQS*VSPSGGAEQQA Trigger: TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGAGATGGCTCAGTGGTTAAAAGCACTGACTGCTCTTCTGAAGGTCCTACTGTGACAATGACATaGTGTGCAGGCAGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRDGSVVKSTDCSSEGPTVTMT*CAGRRA Trigger: TGCCCGCCTGCCTGCACATCATGTCATTGTCACAGT...AGGACCTTCAGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR GCA 90 bp | CTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGCTAGGTCATCGCCAGTaGTGCCCACAGCCACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVRSPNLKPNRAWSAQVLGHRQ*CPQPHS Trigger: GCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAG...CACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTACTGGCTTTCTTCCATGGTGTTGCAAGGGCAGCCTGGTGACATTAAATGTGGAGCAGCCCGGTaGCTGCAGAGCTTCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEYWLSSMVLQGQPGDIKCGAAR*LQSFCA Trigger: TGCGCAGAAGCTCTGCAGCCACCGGGCTGCTCCACA...TTTAATGTCACCAGGCTGCCCTTGCAACACCATGGAAGAAAGCCAGTACTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGTACGCTCTTGGCTGCTaGCAATTGTGGGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRYALGC*QLWVSC Trigger: ACAGGAAACCCACAATTGCCAGCAGCCAAGAGCGTA...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAAAGAGTACCTGGAGCTaGGTGCCAGTTCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTSNQTELGQPKWWSRAKSTWS*VPVPSS Trigger: TGAAGATGGAACTGGCACCCAGCTCCAGGTACTCTT...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGTTCCCTTTAGTTCCTaGGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVAVPFSS*GAFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGCACCCAAGGAACTAAAGGGAACTGCAACCCTATAGGTGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| 3UTR CAA 72 bp | GCCTCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTaGATACATATGCAGCTAGAGACAAGAGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSDGLLGHL*IHMQLETRAPG Trigger: CCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | CCCAAAATTAAAGCTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGCCCACACCACCTGGATaGACTGGCAGTCGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKIKATSKIPKPQTKQSLPTPPG*TGSRAP Trigger: GGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGG...CAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAGCTTTAATTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR TCA 90 bp | CTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGTCTTCAGGGAGGGGCTaGGCCATCAGATCTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVRSPNLKPNRAWSAQVSSGRG*AIRSRS Trigger: TGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAGA...CACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAAAGCGACCGTATCCTTaGGCAAGGAAGCCAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPKPQTKQSLVSPSGGAKRPYP*ARKPVC Trigger: GCATACTGGCTTCCTTGCCCAAGGATACGGTCGCTT...TGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CAACCATGGGCCCTAAGGCCCAAAGGACCCAGAGAGGAAAGCCATGGACTAGGGGACTCAAAAGAAGGCTaGACCAAAAATCCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWALRPKGPREESHGLGDSKEG*TKNPMS Trigger: GCTCATTGGATTTTTGGTCCAGCCTTCTTTTGAGTC...CCCTAGTCCATGGCTTTCCTCTCTGGGTCCTTTGGGCCTTAGGGCCCATGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGACTCTCCGGAGTACTTaGGTTAGAGACAGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRTLRST*VRDRST Trigger: AGTGCTTCTGTCTCTAACCCAAGTACTCCGGAGAGT...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCCAATGAGCTTCTTGAACCAGGTGTCTTGGAGTGAGAGGGCTGTGGTGTCAGGGTTGAGTTaGAGGAGAGGGCCCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKNPMSFLNQVSWSERAVVSGLS*RRGPKP Trigger: AGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACAC...CACAGCCCTCTCACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATTTTTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGCTAGGTCATCGCCAGTaGTGCCCACAGCCACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDGLLGHLLIHMQLELGHRQ*CPQPHS Trigger: GCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAG...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR GCA 90 bp | TCCATAAACTCCGACTCCAGCCCAGCAATAAACCCACAGAGCACATGTGAAGACAGTTCAAGGCTTCTCTaGCTTCCCTTCCTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SINSDSSPAINPQSTCEDSSRLL*LPFLSC Trigger: GCAGGACAGGAAGGGAAGGCAGAGAAGCCTTGAACT...GTCTTCACATGTGCTCTGTGGGTTTATTGCTGGGCTGGAGTCGGAGTTTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTACTGGCTTTCTTCCATGGTGTTGCAAGGGCAGCCTGGTGACATTAAAATACTCCCCGAACGGTaGAAGAGCCACCAGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEYWLSSMVLQGQPGDIKILPER*KSHQVH Trigger: ATGGACCTGGTGGCTCTTGCACCGTTCGGGGAGTAT...TTTAATGTCACCAGGCTGCCCTTGCAACACCATGGAAGAAAGCCAGTACTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | AACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGGACTCAAAAGAAGGCTaGACCAAAAATCCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLKPNRAWSAQVVEQSSRDSKEG*TKNPMS Trigger: GCTCATTGGATTTTTGGTCCAGCCTTCTTTTGAGTC...CCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| 3UTR CAA 72 bp | AGGAGCAGAGACAGGACATGGAATGGGTGGAACAGGTaGAGAACTGGATGCACTATGAGAAGTACTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRDRTWNGWNR*RTGCTMRSTLG Trigger: CCCTAGAGTACTTCTCATAGTGCATCCAGTTCTCAACCTGTTCCACCCATTCCATGTCCTGTCTCTGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACAAGGACCCATTCCAGTaGATGGTCTTCACCGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNGASMIRPSQTPTDKKNKDPFQ*MVFTGL Trigger: CAAGCCGGTGAAGACCATTCACTGGAATGGGTCCTT...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTAGTTAGTCCAGCTTGCGCTTTCTaGTGTCCTCATCATCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFDTYAARDKSSGVLVSPACAF*CPHHPR Trigger: CCGAGGATGATGAGGACACCAGAAAGCGCAAGCTGG...ACTAACTAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACTTGAACCAGGTGTCTTaGAGTGAGAGGGCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNGASMIRPSQTPTDKKNLNQVS*SERAVS Trigger: GGACACAGCCCTCTCACTCCAAGACACCTGGTTCAA...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| 3UTR CAA 72 bp | GGATCCTCTGGACCTGGAATTACAGGGGCTTTTGAGTaGTTTGACTGGGTGCTGAGAATTGAACTTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGPGITGAFE*FDWVLRIELQS Trigger: GGACTGAAGTTCAATTCTCAGCACCCAGTCAAACAACTCAAAAGCCCCTGTAATTCCAGGTCCAGAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGAGATGGCTCAGTGGTTAAAAGCACTGACTGCTCTTCTGAAGGTCCTAAGCACTTCTTCATCTaGCAGAGTCTCCATAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GCRDGSVVKSTDCSSEGPKHFFI*QSLHKL Trigger: GAGTTTATGGAGACTCTGTCAGATGAAGAAGTGCTT...AGGACCTTCAGAAGAGCAGTCAGTGCTTTTAACCACTGAGCCATCTCTGCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTAGTTAGTTTGAACCAGGTGTCTTaGAGTGAGAGGGCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSFDTYAARDKSSGVLVSLNQVS*SERAVS Trigger: GGACACAGCCCTCTCACTCCAAGACACCTGGTTCAA...ACTAACTAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACAAGAGTACCTGGAGCTaGGTGCCAGTTCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGASMIRPSQTPTDKKNKSTWS*VPVPSS Trigger: TGAAGATGGAACTGGCACCCAGCTCCAGGTACTCTT...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAGTCTCCATAAACTCCGACTCCAGCCCAGCAATAAACCCACAGAGCACATTTATGAGTGTCAGCTaGGAACATGCATGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRVSINSDSSPAINPQSTFMSVS*EHACWL Trigger: CAACCAACATGCATGTTCCCAGCTGACACTCATAAA...TGTGCTCTGTGGGTTTATTGCTGGGCTGGAGTCGGAGTTTATGGAGACTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATCCAATGAGCTTCTTGAACCAGGTGTCTTGGAGTGAGAGGGCTGTGTGTCAGCTGGGAACATaGATGTTGGTTGTGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TKNPMSFLNQVSWSERAVCQLGT*MLVVKS Trigger: GGATTTCACAACCAACATGCATGTTCCCAGCTGACA...CACAGCCCTCTCACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGACTCTCCGGAGTACTTaGGTTAGAGACAGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDGLLGHLLIHMQLETLRST*VRDRST Trigger: AGTGCTTCTGTCTCTAACCCAAGTACTCCGGAGAGT...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTCCAGTGATGGCCTACTGGGCCATCTTTTGATACATATGCAGCTAGAGTCCAACACTGGCCATTaGGGTTTCAGATTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDGLLGHLLIHMQLESNTGH*GFRFIQ Trigger: CTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGA...CTCTAGCTGCATATGTATCAAAAGATGGCCCAGTAGGCCATCACTGGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | ACATGTGAAGACTCAAAAGAAGGCTGGACCAAAAATCCAATGAGCTTCTTGAACAAAGCCCTGTCCAGATaGGAGTTCAAGGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCEDSKEGWTKNPMSFLNKALSR*EFKASL Trigger: CAGAGAAGCCTTGAACTCTCATCTGGACAGGGCTTT...GTTCAAGAAGCTCATTGGATTTTTGGTCCAGCCTTCTTTTGAGTCTTCACATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| 3UTR CAA 72 bp | TGTGTCCCTGAGTGTCAACAACAAAGACTTTTGCCCTaGAAAGATCTGTGCTTTCTCAGTCCTCAAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVPECQQQRLLP*KDLCFLSPQAV Trigger: TACAGCTTGAGGACTGAGAAAGCACAGATCTTTCAAGGGCAAAAGTCTTTGTTGTTGACACTCAGGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR TCA 90 bp | ACATGTGAAGACTCAAAAGAAGGCTGGACCAAAAATCCAATGAGCTTCTTGAACACGCTCGAACTTTTATaGGTGTCAGCTGGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: TCEDSKEGWTKNPMSFLNTLELL*VSAGNM Trigger: CATGTTCCCAGCTGACACTCATAAAAGTTCGAGCGT...GTTCAAGAAGCTCATTGGATTTTTGGTCCAGCCTTCTTTTGAGTCTTCACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| 3UTR CAA 72 bp | CTGAAATGTGTCCCTGAGTGTCAACAACAAAGACTTTaGCCCTTGAAAGATCTGTGCTTTCTCAGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKCVPECQQQRL*PLKDLCFLSPQ Trigger: TTGAGGACTGAGAAAGCACAGATCTTTCAAGGGCAAAAGTCTTTGTTGTTGACACTCAGGGACACATTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS CCA 90 bp | CTACACCACCGAAGCAGCGTTCCGAGCGGATGCGGCCCCCGGCGCTaGCGGTGGCCTCCAGAACCCGCAGGTGTGGAGCAGCCCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHHRSSVPSGCGPRR*RWPPEPAGVEQPGG Trigger: GCCACCGGGCTGCTCCACACCTGCGGGTTCTGGAGGCCACCGCCAGCGCCGGGGGCCGCATCCGCTCGGAACGCTGCTTCGGTGGTGTAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS GCA 90 bp | GTGCACCCAGCTCCACTACACCACCGAAGCAGCGTTCCGAGCGGATaGGGCCCCCGGCGCTGGCGGTGGCCTCCAGAACCCGCAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VHPAPLHHRSSVPSG*GPRRWRWPPEPAGV Trigger: CACACCTGCGGGTTCTGGAGGCCACCGCCAGCGCCGGGGGCCGCATCCGCTCGGAACGCTGCTTCGGTGGTGTAGTGGAGCTGGGTGCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS GCA 90 bp | CAGCTGGAAGACAGGATTGTCCTGGGAGGGCCCATGGATCCAGTGTaGACCCAGCTCCACTACACCACCGAAGCAGCGTTCCGAGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLEDRIVLGGPMDPV*TQLHYTTEAAFRAD Trigger: ATCCGCTCGGAACGCTGCTTCGGTGGTGTAGTGGAGCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGACAATCCTGTCTTCCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS GCA 90 bp | CTTCAGGGAGGGGCTGAGCCATCAGATCTAGGTCATCGCCAGTGCTaGCCACAGCCACATAGCTGTAGGAACCTCGGGTGTACGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQGGAEPSDLGHRQC*PQPHSCRNLGCTGH Trigger: GTGCCCCGTACACCCGAGGTTCCTACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS CCA 90 bp | CCCAGGAGCCCGAATTCTGCAGCCAGCTGGAAGACAGGATTGTCCTaGGAGGGCCCATGGATCCAGTGTGCACCCAGCTCCACTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSPNSAASWKTGLS*EGPWIQCAPSSTTP Trigger: TGGTGTAGTGGAGCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGACAATCCTGTCTTCCAGCTGGCTGCAGAATTCGGGCTCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS GCA 90 bp | CATCTTCAGGGAGGGGCTGAGCCATCAGATCTAGGTCATCGCCAGTaGTGCCCACAGCCACATAGCTGTAGGAACCTCGGGTGTACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLQGGAEPSDLGHRQ*CPQPHSCRNLGCTG Trigger: CCCCGTACACCCGAGGTTCCTACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS CCA 90 bp | GGGCCATCTCTGTCATCAGCTCCAGGCTCACACTTGTTCCAGAGCTaGACCAGATCATGGAGGGCAGGGCCACGTGCCCTCCTGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPSLSSAPGSHLFQS*TRSWRAGPRALLYP Trigger: TGGATACAGGAGGGCACGTGGCCCTGCCCTCCATGATCTGGTCCAGCTCTGGAACAAGTGTGAGCCTGGAGCTGATGACAGAGATGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS CCA 90 bp | GGCTTCTCTGCCTTCCCTTCCTGTCCTGCTGTGTCAGGGTTGAGTTaGAGGAGAGGGCCCAAGCCTGAGCCTTACAAGCCCAGCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: GFSAFPSCPAVSGLS*RRGPKPEPYKPSQI Trigger: GATCTGGCTGGGCTTGTAAGGCTCAGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
||
| CDS-3UTR CAA 90 bp | TGTATCTTCCCACACCACCTGGATGAACTGGCAGTCGGGCTCCCAGAAGGGCTCTGTGTCAGGGTTGAGTaGGAGGAGAGGGCCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CIFPHHLDELAVGLPEGLCVRVE*EERAQA Trigger: GGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACA...GAGCCCTTCTGGGAGCCCGACTGCCAGTTCATCCAGGTGGTGTGGGAAGATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
||
| CDS TCA 90 bp | AAGAGTACCTGGAGCTGGGTGCCAGTTCCATCTTCAGGGAGGGGCTaGGCCATCAGATCTAGGTCATCGCCAGTGCTGCCCACAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KSTWSWVPVPSSGRG*AIRSRSSPVLPTAT Trigger: TGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAGATGGAACTGGCACCCAGCTCCAGGTACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS TCA 90 bp | TTCAAGGCTTCTCTGCCTTCCCTTCCTGTCCTGCTGTGTCAGGGTTaGGTTGGAGGAGAGGGCCCAAGCCTGAGCCTTACAAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKASLPSLPVLLCQG*VGGEGPSLSLTSPA Trigger: GGCTGGGCTTGTAAGGCTCAGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGAAGCCTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
||
| CDS CCA 90 bp | AATTCTGCAGCCAGCTGGAAGACAGGATTGTCCTGGGAGGGCCCATaGATCCAGTGTGCACCCAGCTCCACTACACCACCGAAGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NSAASWKTGLSWEGP*IQCAPSSTTPPKQR Trigger: ACGCTGCTTCGGTGGTGTAGTGGAGCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGACAATCCTGTCTTCCAGCTGGCTGCAGAATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS CCA 90 bp | TCATCAGCTCCAGGCTCACACTTGTTCCAGAGCTGGACCAGATCATaGAGGGCAGGGCCACGTGCCCTCCTGTATCCACAAGCTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPGSHLFQSWTRS*RAGPRALLYPQAGS Trigger: AGAACCAGCTTGTGGATACAGGAGGGCACGTGGCCCTGCCCTCCATGATCTGGTCCAGCTCTGGAACAAGTGTGAGCCTGGAGCTGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS CCA 90 bp | CTCGGGTGTACGGGGCACTGTGCCACTGAGACCTTCGTACGCTCTTaGCTGCTGGCAATTGTGGGTTTCCTGTCACTCTCCGGAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LGCTGHCATETFVRS*LLAIVGFLSLSGVL Trigger: AAGTACTCCGGAGAGTGACAGGAAACCCACAATTGCCAGCAGCCAAGAGCGTACGAAGGTCTCAGTGGCACAGTGCCCCGTACACCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CAA 90 bp | CCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAAGCTGGAAGACAGGATaGTCCTGGGAGGGCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQTSNQTELGQPKWWSRASWKTG*SWEGPW Trigger: CCATGGGCCCTCCCAGGACAATCCTGTCTTCCAGCT...TGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS CCA 90 bp | CAGATCATGGAGGGCAGGGCCACGTGCCCTCCTGTATCCACAAGCTaGTTCTCTTCCGATAATTCTTTCTCCCCCAGGAGCCCGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QIMEGRATCPPVSTS*FSSDNSFSPRSPNS Trigger: AGAATTCGGGCTCCTGGGGGAGAAAGAATTATCGGAAGAGAACCAGCTTGTGGATACAGGAGGGCACGTGGCCCTGCCCTCCATGATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
||
| CDS-3UTR CAA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCACTTGGCTGCTGGCAATaGTGGGTTTCCTGTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQTKQSLVSPSGGAEQQALGCWQ*WVSCHS Trigger: AGAGTGACAGGAAACCCACAATTGCCAGCAGCCAAG...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCTTGGCTGCTGGCAATaGTGGGTTTCCTGTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKPQTKQSLVSPSGGAEQLGCWQ*WVSCHS Trigger: AGAGTGACAGGAAACCCACAATTGCCAGCAGCCAAG...CTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
||
| CDS GCA 90 bp | CCATTTCTTGTAAAGCCCTGTCCAGATGAGAGTTCAAGGCTTCTCTaGCTTCCCTTCCTGTCCTGCTGTGTCAGGGTTGAGTTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFLVKPCPDESSRLL*LPFLSCCVRVELEE Trigger: CTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGAAGCCTTGAACTCTCATCTGGACAGGGCTTTACAAGAAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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| CDS CCA 90 bp | ACTGTATACTCCCCGAACGGTGCAAGAGCCACCAGGTCCATGCTGTaGGTGCCGCTCACACAACACTCTATGTTGAAGAAAGTATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVYSPNGARATRSML*VPLTQHSMLKKVFR Trigger: CCTGAATACTTTCTTCAACATAGAGTGTTGTGTGAGCGGCACCCACAGCATGGACCTGGTGGCTCTTGCACCGTTCGGGGAGTATACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS-3UTR CAA 90 bp | CCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGGTGGAGCAGAGCAGCAGGCAAACTCCAAGAAGATTTaGTTGTTGGTACCAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PQTKQSLVSPSGGAEQQANSKKI*LLVPKP Trigger: AGGCTTTGGTACCAACAACAAAATCTTCTTGGAGTT...TGCCTGCTGCTCTGCTCCACCACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CCA 90 bp | CTGCTGACTTATCTCCTTCTTCAGGAACTCTCCAACACTGGCCATTaGGGTTTCAGATTCATTCAGGAATTCTCGGGTCCGCTCTATCAG | + |
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Preference number: 5 (lower is better) Translates to: LLTYLLLQELSNTGH*GFRFIQEFSGPLYQ Trigger: CTGATAGAGCGGACCCGAGAATTCCTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGAGAGTTCCTGAAGAAGGAGATAAGTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS-3UTR CAA 90 bp | CTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGGTCAGCCCAAGTGTCCAAGAAGATTTTGTaGTTGGTACCAAAGCCTAGT | + |
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Preference number: 5 (lower is better) Translates to: LPVRSPNLKPNRAWSAQVSKKIL*LVPKPS Trigger: ACTAGGCTTTGGTACCAACAACAAAATCTTCTTGGA...CACTTGGGCTGACCAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS-3UTR CAA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACAATCCAATGAGCTTCTaGAACCAGGTGTCTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LNGASMIRPSQTPTDKKNNPMSF*NQVSWS Trigger: ACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATT...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGCTGCTGTGACGACAATGAGACCAGACTACAAAAATATCCAAGAGCCTCCAAGAAGATTTTGTaGTTGGTACCAAAGCCTAGT | + |
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Preference number: 5 (lower is better) Translates to: LCSCCDDNETRLQKYPRASKKIL*LVPKPS Trigger: ACTAGGCTTTGGTACCAACAACAAAATCTTCTTGGA...GGCTCTTGGATATTTTTGTAGTCTGGTCTCATTGTCGTCACAGCAGCTGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS-3UTR CAA 90 bp | CTTAACGGGGCATCCATGATCAGACCAAGCCAGACTCCAACAGATAAGAAAAACAACTCCAAGAAGATTTaGTTGTTGGTACCAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LNGASMIRPSQTPTDKKNNSKKI*LLVPKP Trigger: AGGCTTTGGTACCAACAACAAAATCTTCTTGGAGTT...GTTTTTCTTATCTGTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS-3UTR CAA 90 bp | CCCAAAATTAAAGCTACCAGTAAGATCCCCAAACCTCAAACCAAACAGAGCTTGAATCCAATGAGCTTCTaGAACCAGGTGTCTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: PKIKATSKIPKPQTKQSLNPMSF*NQVSWS Trigger: ACTCCAAGACACCTGGTTCAAGAAGCTCATTGGATT...CAAGCTCTGTTTGGTTTGAGGTTTGGGGATCTTACTGGTAGCTTTAATTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS GCA 72 bp | GGCTGCAGAGCTTCTGCGCAGCGCCCAGCCCCGCGATaGCGCTGCCCACCACCAGCACCCGCGGGCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GCRASAQRPAPR*RCPPPAPAGQG Trigger: TCCCTGGCCCGCGGGTGCTGGTGGTGGGCAGCGGCATCGCGGGGCTGGGCGCTGCGCAGAAGCTCTGCAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CCA 72 bp | GTGGCCTCCAGAACCCGCAGGTGTGGAGCAGCCCGGTaGCTGCAGAGCTTCTGCGCAGCGCCCAGCCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: VASRTRRCGAAR*LQSFCAAPSPA Trigger: CGCGGGGCTGGGCGCTGCGCAGAAGCTCTGCAGCCACCGGGCTGCTCCACACCTGCGGGTTCTGGAGGCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS GCA 72 bp | CCTCCAGAACCCGCAGGTGTGGAGCAGCCCGGTGGCTaGAGAGCTTCTGCGCAGCGCCCAGCCCCGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: PPEPAGVEQPGG*RASAQRPAPRC Trigger: GCATCGCGGGGCTGGGCGCTGCGCAGAAGCTCTGCAGCCACCGGGCTGCTCCACACCTGCGGGTTCTGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS GCA 72 bp | GCTCCACTACACCACCGAAGCAGCGTTCCGAGCGGATaGGGCCCCCGGCGCTGGCGGTGGCCTCCAGAACCC | + |
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Preference number: 6 (lower is better) Translates to: APLHHRSSVPSG*GPRRWRWPPEP Trigger: GGGTTCTGGAGGCCACCGCCAGCGCCGGGGGCCGCATCCGCTCGGAACGCTGCTTCGGTGGTGTAGTGGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | GCCAGCTGGAAGACAGGATTGTCCTGGGAGGGCCCATaGATCCAGTGTGCACCCAGCTCCACTACACCACCG | + |
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Preference number: 6 (lower is better) Translates to: ASWKTGLSWEGP*IQCAPSSTTPP Trigger: CGGTGGTGTAGTGGAGCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGACAATCCTGTCTTCCAGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS TCA 72 bp | TGGAGCTGGGTGCCAGTTCCATCTTCAGGGAGGGGCTaGGCCATCAGATCTAGGTCATCGCCAGTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: WSWVPVPSSGRG*AIRSRSSPVLP Trigger: GGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCCTCCCTGAAGATGGAACTGGCACCCAGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS GCA 72 bp | GACAGGATTGTCCTGGGAGGGCCCATGGATCCAGTGTaGACCCAGCTCCACTACACCACCGAAGCAGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: DRIVLGGPMDPV*TQLHYTTEAAF Trigger: GAACGCTGCTTCGGTGGTGTAGTGGAGCTGGGTGCACACTGGATCCATGGGCCCTCCCAGGACAATCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS GCA 72 bp | GGAGGGGCTGAGCCATCAGATCTAGGTCATCGCCAGTaGTGCCCACAGCCACATAGCTGTAGGAACCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GGAEPSDLGHRQ*CPQPHSCRNLG Trigger: CCCGAGGTTCCTACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CCA 72 bp | CTGTCATCAGCTCCAGGCTCACACTTGTTCCAGAGCTaGACCAGATCATGGAGGGCAGGGCCACGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSAPGSHLFQS*TRSWRAGPRAL Trigger: GAGGGCACGTGGCCCTGCCCTCCATGATCTGGTCCAGCTCTGGAACAAGTGTGAGCCTGGAGCTGATGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS TCA 72 bp | TGTGTCAGGGTTGAGTTGGAGGAGAGGGCCCAAGCCTaGGCCTTACAAGCCCAGCCAGATCCTAGCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: CVRVELEERAQA*ALQAQPDPSTS Trigger: CGAGGTGCTAGGATCTGGCTGGGCTTGTAAGGCTCAGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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| CDS GCA 72 bp | GGGGCTGAGCCATCAGATCTAGGTCATCGCCAGTGCTaGCCACAGCCACATAGCTGTAGGAACCTCGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GAEPSDLGHRQC*PQPHSCRNLGC Trigger: ACACCCGAGGTTCCTACAGCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CAA 90 bp | GTTCAAGGCTTCTCTGCCTTCCCTTCCTGTCCTGCTGTGTCAGGGTaGAGTTGGAGGAGAGGGCCCAAGCCTGAGCCTTACAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VQGFSAFPSCPAVSG*SWRRGPKPEPYKPS Trigger: GCTGGGCTTGTAAGGCTCAGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGAAGCCTTGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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| CDS TCA 72 bp | TCTCTGCCTTCCCTTCCTGTCCTGCTGTGTCAGGGTTaGGTTGGAGGAGAGGGCCCAAGCCTGAGCCTTACA | + |
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Preference number: 6 (lower is better) Translates to: SLPSLPVLLCQG*VGGEGPSLSLT Trigger: TGTAAGGCTCAGGCTTGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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| CDS CCA 72 bp | GAGGGCAGGGCCACGTGCCCTCCTGTATCCACAAGCTaGTTCTCTTCCGATAATTCTTTCTCCCCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: EGRATCPPVSTS*FSSDNSFSPRS Trigger: GCTCCTGGGGGAGAAAGAATTATCGGAAGAGAACCAGCTTGTGGATACAGGAGGGCACGTGGCCCTGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | ACGGGGCACTGTGCCACTGAGACCTTCGTACGCTCTTaGCTGCTGGCAATTGTGGGTTTCCTGTCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGHCATETFVRS*LLAIVGFLSLS Trigger: GGAGAGTGACAGGAAACCCACAATTGCCAGCAGCCAAGAGCGTACGAAGGTCTCAGTGGCACAGTGCCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CCA 72 bp | AATGTCCGATGTGTGGCTTCCCCAGCAAAGAGTACCTaGAGCTGGGTGCCAGTTCCATCTTCAGGGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: NVRCVASPAKST*SWVPVPSSGRG Trigger: GCCCCTCCCTGAAGATGGAACTGGCACCCAGCTCCAGGTACTCTTTGCTGGGGAAGCCACACATCGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS GCA 72 bp | GAGAGTTCAAGGCTTCTCTGCCTTCCCTTCCTGTCCTaGTGTGTCAGGGTTGAGTTGGAGGAGAGGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: ESSRLLCLPFLS*CVRVELEERAQ Trigger: TTGGGCCCTCTCCTCCAACTCAACCCTGACACAGCAGGACAGGAAGGGAAGGCAGAGAAGCCTTGAACTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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| CDS CCA 72 bp | TCCCCGAACGGTGCAAGAGCCACCAGGTCCATGCTGTaGGTGCCGCTCACACAACACTCTATGTTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SPNGARATRSML*VPLTQHSMLKK Trigger: TTTCTTCAACATAGAGTGTTGTGTGAGCGGCACCCACAGCATGGACCTGGTGGCTCTTGCACCGTTCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CAA 72 bp | CCACTGAGACCTTCGTACGCTCTTGGCTGCTGGCAATaGTGGGTTTCCTGTCACTCTCCGGAGTACTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PLRPSYALGCWQ*WVSCHSPEYLG Trigger: ACCCAAGTACTCCGGAGAGTGACAGGAAACCCACAATTGCCAGCAGCCAAGAGCGTACGAAGGTCTCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CAA 72 bp | ATGGTCTTCACCGGCTTGTCAAAAGCGACCGTATCCTaGGGCAAGGAAGCCAGTATGCGGTCGGTAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: MVFTGLSKATVS*GKEASMRSVSP Trigger: AGGACTTACCGACCGCATACTGGCTTCCTTGCCCAAGGATACGGTCGCTTTTGACAAGCCGGTGAAGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000211757.2 |
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| CDS CAA 90 bp | GCCACCAGGTCCATGCTGTGGGTGCCGCTCACACAACACTCTATGTaGAAGAAAGTATTCAGGATAGCCAGCTTGCGCTTTCTGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ATRSMLWVPLTQHSM*KKVFRIASLRFLVS Trigger: GGACACCAGAAAGCGCAAGCTGGCTATCCTGAATACTTTCTTCAACATAGAGTGTTGTGTGAGCGGCACCCACAGCATGGACCTGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | GAAAAGCAGCTTCCTGGAAGGACCCATTCCAGTGAATaGTCTTCACCGGCTTGTCAAAAGCGACCGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: EKQLPGRTHSSE*SSPACQKRPYP Trigger: AGGATACGGTCGCTTTTGACAAGCCGGTGAAGACCATTCACTGGAATGGGTCCTTCCAGGAAGCTGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000211757.2 |
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| CDS TCA 72 bp | GTAGCCACTTCCATTTCTTGTAAAGCCCTGTCCAGATaGGAGTTCAAGGCTTCTCTGCCTTCCCTTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VATSISCKALSR*EFKASLPSLPV Trigger: GACAGGAAGGGAAGGCAGAGAAGCCTTGAACTCTCATCTGGACAGGGCTTTACAAGAAATGGAAGTGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211757.2 |
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| CDS CAA 90 bp | CCTGCTGACTTATCTCCTTCTTCAGGAACTCTCCAACACTGGCCATaGGGGTTTCAGATTCATTCAGGAATTCTCGGGTCCGCTCTATCA | + |
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Preference number: 6 (lower is better) Translates to: PADLSPSSGTLQHWP*GFQIHSGILGSALS Trigger: TGATAGAGCGGACCCGAGAATTCCTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGAGAGTTCCTGAAGAAGGAGATAAGTCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | TATCTCCTTCTTCAGGAACTCTCCAACACTGGCCATTaGGGTTTCAGATTCATTCAGGAATTCTCGGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: YLLLQELSNTGH*GFRFIQEFSGP Trigger: CGGACCCGAGAATTCCTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGAGAGTTCCTGAAGAAGGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | GGCAATTGTGGGTTTCCTGTCACTCTCCGGAGTACTTaGGTTAGAGACAGAAGCACTTCTTCATCTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: GNCGFPVTLRST*VRDRSTSSSDR Trigger: TCTGTCAGATGAAGAAGTGCTTCTGTCTCTAACCCAAGTACTCCGGAGAGTGACAGGAAACCCACAATTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026537.13 ENSMUST00000097967.4 |
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| CDS CAA 72 bp | TCCATGCTGTGGGTGCCGCTCACACAACACTCTATGTaGAAGAAAGTATTCAGGATAGCCAGCTTGCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SMLWVPLTQHSM*KKVFRIASLRF Trigger: AAAGCGCAAGCTGGCTATCCTGAATACTTTCTTCAACATAGAGTGTTGTGTGAGCGGCACCCACAGCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS TCA 72 bp | AGAAAACCTTCCATTTCTTGTAAAGCCCTGTCCAGATaGGAGTTCAAGGCTTCTCTGCCTTCCCTTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RKPSISCKALSR*EFKASLPSLPV Trigger: GACAGGAAGGGAAGGCAGAGAAGCCTTGAACTCTCATCTGGACAGGGCTTTACAAGAAATGGAAGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209908.2 |
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| CDS CAA 72 bp | TTATCTCCTTCTTCAGGAACTCTCCAACACTGGCCATaGGGGTTTCAGATTCATTCAGGAATTCTCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSPSSGTLQHWP*GFQIHSGILGS Trigger: GGACCCGAGAATTCCTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGAGAGTTCCTGAAGAAGGAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS CCA 72 bp | GCTGACTTATCTCCTTCTTCAGGAACTCTCCAACACTaGCCATTGGGGTTTCAGATTCATTCAGGAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: ADLSPSSGTLQH*PLGFQIHSGIL Trigger: GAGAATTCCTGAATGAATCTGAAACCCCAATGGCCAGTGTTGGAGAGTTCCTGAAGAAGGAGATAAGTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026537.13 |
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| CDS TCA 72 bp | TCTGGGTGTAATAGCTTCTCAACGCTCGAACTTTTATaGGTGTCAGCTGGGAACATGCATGTTGGTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SGCNSFSTLELL*VSAGNMHVGCE Trigger: TTCACAACCAACATGCATGTTCCCAGCTGACACTCATAAAAGTTCGAGCGTTGAGAAGCTATTACACCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209908.2 ENSMUST00000211757.2 |
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