Pregenerated sensors for PANX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011118Ensembl transcript IDs: ENSMUST00000011262.4, ENSMUST00000142228.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGCCAGCCTTGTCCTGCGTATGGTGAGCCAGCGAGTCCCAGCATaGGCTATCCACGTATGCAGCCTGCCTGACACTGAAGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LASLVLRMVSQRVPA*AIHVCSLPDTEVAG Trigger: CCCAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAGGCTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR TCA 90 bp | CAGAGAGATTTCACCTTGTACTGGCCAGCCTTGTCCTGCGTATGGTaGGCCAGCGAGTCCCAGCATGAGCTATCCACGTATGCAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: QRDFTLYWPALSCVW*ASESQHELSTYAAC Trigger: GCAGGCTGCATACGTGGATAGCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAGGCTGGCCAGTACAAGGTGAAATCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR TCA 90 bp | CTCTTATTAAATTGTTCTACCCTGCCCATTGTGGGAAGGGAAGCATaGCTTCTAGAGCGGGTGGGCCTTGTGAGAATTTCCCTCCATAAA | + |
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Preference number: 1 (lower is better) Translates to: LLLNCSTLPIVGREA*LLERVGLVRISLHK Trigger: TTTATGGAGGGAAATTCTCACAAGGCCCACCCGCTCTAGAAGTCATGCTTCCCTTCCCACAATGGGCAGGGTAGAACAATTTAATAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CCA 90 bp | GGCTATAGAGTGCTTGGCAAGGCTGAAAATGTCCACAAAGCAAGATaGGCAGGCCAAATCAAAGAGTTTCAGGGGTTCATATCCTTATTA | + |
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Preference number: 1 (lower is better) Translates to: GYRVLGKAENVHKAR*AGQIKEFQGFISLL Trigger: TAATAAGGATATGAACCCCTGAAACTCTTTGATTTGGCCTGCCCATCTTGCTTTGTGGACATTTTCAGCCTTGCCAAGCACTCTATAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR TCA 90 bp | GCACTACTGTCCTCTGAATGTTCTAAACTGAACTTTTCAGTTCTTTaGCTCTTGACTCCCAGACTTCACACTGAATTTTCATGTGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: ALLSSECSKLNFSVL*LLTPRLHTEFSCVD Trigger: ATCAACACATGAAAATTCAGTGTGAAGTCTGGGAGTCAAGAGTCAAAGAACTGAAAAGTTCAGTTTAGAACATTCAGAGGACAGTAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CCA 90 bp | TGCCAGGAGGAAACAGTGAATGGAGAATGTATAGAAGTGGATCGATaGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTAT | + |
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Preference number: 1 (lower is better) Translates to: CQEETVNGECIEVDR*DLHVNTPLFTFLVY Trigger: ATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTCTATACATTCTCCATTCACTGTTTCCTCCTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 90 bp | TCCCAGCATGAGCTATCCACGTATGCAGCCTGCCTGACACTGAAGTaGCTGGGAGAGAAACAGCTGATCGGAGACCCATATGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SQHELSTYAACLTLK*LGEKQLIGDPYGSG Trigger: GCCTGAGCCATATGGGTCTCCGATCAGCTGTTTCTCTCCCAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCCAGCCTTGTCCTGCGTATGGTGAGCCAGCGAGTCCCAGCATGAGCTATGATCGGAGACCCATATaGCTCAGGCTGACTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TGQPCPAYGEPASPSMSYDRRPI*LRLTSN Trigger: GTTTGAAGTCAGCCTGAGCCATATGGGTCTCCGATC...ATAGCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAGGCTGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCAGCCTTTTCACCTCCTaGCCTTCACTGGTTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: WRSEGNLENRFYPFTIWVSLFTS*PSLVGC Trigger: ACAGCCAACCAGTGAAGGTCAGGAGGTGAAAAGGCT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR TCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCCAGTTCTTTGACTCTTaGCTCCCAGACTTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: WRSEGNLENRFYPFTIWVQFFDS*LPDFTL Trigger: CAGTGTGAAGTCTGGGAGTCAAGAGTCAAAGAACTG...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR TCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCACTCTGCATAGCTTGTaGAGAAGGAGAGTTACTTTC | + |
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Preference number: 2 (lower is better) Translates to: WRSEGNLENRFYPFTIWVTLHSL*RRRVTF Trigger: GAAAGTAACTCTCCTTCTTCACAAGCTATGCAGAGT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 90 bp | TACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGTAACTaGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCCCAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: YSFVYFSCVWRSEGN*ENRFYPFTIWVPGI Trigger: AATGCCTGGGACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGAACTTTTCAGTTCTTTaGCTCTTGACTCCCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVNFSVL*LLTPRL Trigger: AAGTCTGGGAGTCAAGAGTCAAAGAACTGAAAAGTT...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 90 bp | GAGGAAACAGTGAATGGAGAATGTATAGAAGTGGATCGATGGGACTaGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: EETVNGECIEVDRWD*HVNTPLFTFLVYGD Trigger: ATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTCTATACATTCTCCATTCACTGTTTCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGACAGGATATTTCAGCTaGATCCAATCTCTTAACCAT | + |
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Preference number: 2 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVTGYFS*IQSLNH Trigger: ATGGTTAAGAGATTGGATTCAGCTGAAATATCCTGT...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 90 bp | GACATGAAACTTTTATTAATGTCATCTGTGAACATCTATAAGCTCTaGGCTTGCTTTATGGCAATTGACATGAATTTGTCAGAAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: DMKLLLMSSVNIYKL*ACFMAIDMNLSEAT Trigger: GGTTGCTTCTGACAAATTCATGTCAATTGCCATAAAGCAAGCCAAGAGCTTATAGATGTTCACAGATGACATTAATAAAAGTTTCATGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGTTCTGTCTTTTACTCTaGATAGCTTGTGAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TCMLILLCLLFLCMEIRRFCLLL*IACEEG Trigger: TCCTTCTTCACAAGCTATGCAGAGTAAAAGACAGAA...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGTCTGAGTTCAATAATTaGACTTTGCTTCAGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TCMLILLCLLFLCMEIRRSEFNN*TLLQLV Trigger: AACAAGCTGAAGCAAAGTGCAATTATTGAACTCAGA...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR TCA 72 bp | CTTGTCCTGCGTATGGTGAGCCAGCGAGTCCCAGCATaGGCTATCCACGTATGCAGCCTGCCTGACACTGAA | + |
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Preference number: 3 (lower is better) Translates to: LVLRMVSQRVPA*AIHVCSLPDTE Trigger: TTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR TCA 72 bp | TTCACCTTGTACTGGCCAGCCTTGTCCTGCGTATGGTaGGCCAGCGAGTCCCAGCATGAGCTATCCACGTAT | + |
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Preference number: 3 (lower is better) Translates to: FTLYWPALSCVW*ASESQHELSTY Trigger: ATACGTGGATAGCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAGGCTGGCCAGTACAAGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR TCA 72 bp | AATTGTTCTACCCTGCCCATTGTGGGAAGGGAAGCATaGCTTCTAGAGCGGGTGGGCCTTGTGAGAATTTCC | + |
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Preference number: 3 (lower is better) Translates to: NCSTLPIVGREA*LLERVGLVRIS Trigger: GGAAATTCTCACAAGGCCCACCCGCTCTAGAAGTCATGCTTCCCTTCCCACAATGGGCAGGGTAGAACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR TCA 72 bp | CAGGTATTCAGGCTTGGCAGCAGCCTTTTCACCTCCTaGCCTTCACTGGTTGGCTGTAGTATGCTTTGGACT | + |
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Preference number: 3 (lower is better) Translates to: QVFRLGSSLFTS*PSLVGCSMLWT Trigger: AGTCCAAAGCATACTACAGCCAACCAGTGAAGGTCAGGAGGTGAAAAGGCTGCTGCCAAGCCTGAATACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CCA 72 bp | TTTGGGTCCCAGGCATTGAAATCAGGTATTCAGGCTTaGCAGCAGCCTTTTCACCTCCTGACCTTCACTGGT | + |
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Preference number: 3 (lower is better) Translates to: FGSQALKSGIQA*QQPFHLLTFTG Trigger: ACCAGTGAAGGTCAGGAGGTGAAAAGGCTGCTGCCAAGCCTGAATACCTGATTTCAATGCCTGGGACCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CCA 72 bp | GGCTTGGCAGCAGCCTTTTCACCTCCTGACCTTCACTaGTTGGCTGTAGTATGCTTTGGACTATTAGGAATA | + |
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Preference number: 3 (lower is better) Translates to: GLAAAFSPPDLH*LAVVCFGLLGI Trigger: TATTCCTAATAGTCCAAAGCATACTACAGCCAACCAGTGAAGGTCAGGAGGTGAAAAGGCTGCTGCCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CCA 72 bp | GTGCTTGGCAAGGCTGAAAATGTCCACAAAGCAAGATaGGCAGGCCAAATCAAAGAGTTTCAGGGGTTCATA | + |
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Preference number: 3 (lower is better) Translates to: VLGKAENVHKAR*AGQIKEFQGFI Trigger: TATGAACCCCTGAAACTCTTTGATTTGGCCTGCCCATCTTGCTTTGTGGACATTTTCAGCCTTGCCAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | TGTACTGGCCAGCCTTGTCCTGCGTATGGTGAGCCAGCGAGTCCCAGCATGAGCCAGGTTCCGGAATGCTaGGATTACAGATGTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CTGQPCPAYGEPASPSMSQVPEC*DYRCVN Trigger: GTTCACACATCTGTAATCGCAGCATTCCGGAACCTG...GCTCATGCTGGGACTCGCTGGCTCACCATACGCAGGACAAGGCTGGCCAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| CDS-3UTR GCA 90 bp | GAGTCCCAGCATGAGCTATCCACGTATGCAGCCTGCCTGACACTGAAGTTGCTGAGAGAGCATGTACTCTaGAGCAGTGTGTGCGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: ESQHELSTYAACLTLKLLREHVL*SSVCER Trigger: TCGCTCGCACACACTGCTGCAGAGTACATGCTCTCT...CAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| 3UTR CAA 72 bp | ATTTGGGTCCCAGGCATTGAAATCAGGTATTCAGGCTaGGCAGCAGCCTTTTCACCTCCTGACCTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: IWVPGIEIRYSG*AAAFSPPDLHW Trigger: CCAGTGAAGGTCAGGAGGTGAAAAGGCTGCTGCCAAGCCTGAATACCTGATTTCAATGCCTGGGACCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCACAGCAGGTCAGAGCTaGGGGAGGGCACAGCTACAT | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVTAGQS*GRAQLH Trigger: ATGTAGCTGTGCCCTCCCTCAGCTCTGACCTGCTGT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCCTGCTCTGCCGGATCTaGAACATGTGCTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVLLCRI*NMCCTR Trigger: CCTGGTGCAGCACATGTTGCAGATCCGGCAGAGCAG...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | GAGTCCCAGCATGAGCTATCCACGTATGCAGCCTGCCTGACACTGAAGTTGCTGGAACCATACCCAGATTaGAAGAAGGCTCTTTTATTT | + |
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Preference number: 4 (lower is better) Translates to: ESQHELSTYAACLTLKLLEPYPD*KKALLF Trigger: AAATAAAAGAGCCTTCTTTCAATCTGGGTATGGTTC...CAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| CDS-3UTR GCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCAGAGAGCATGTACTCTaGAGCAGTGTGTGCGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVREHVL*SSVCER Trigger: TCGCTCGCACACACTGCTGCAGAGTACATGCTCTCT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCGGCACAGCTACATATTaGCACAGCAACACTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVGTATY*HSNTGR Trigger: TCTGCCAGTGTTGCTGTGGCAATATGTAGCTGTGCC...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | ACTTTGCTTCAGCTTGTTCCTTTAGCACTACTGTCCTCTGAATGTTCTAAACTGATCTGCAACATGTGCTaGACCAGGCGGATGGAACGG | + |
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Preference number: 4 (lower is better) Translates to: TLLQLVPLALLSSECSKLICNMC*TRRMER Trigger: CCGTTCCATCCGCCTGGTGCAGCACATGTTGCAGAT...CAGTTTAGAACATTCAGAGGACAGTAGTGCTAAAGGAACAAGCTGAAGCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCGATTTCACCTTGTACTaGCCAGCCTTGTCCTGCGTA | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVDFTLY*PALSCV Trigger: TACGCAGGACAAGGCTGGCCAGTACAAGGTGAAATC...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | CCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCTTGGCAAGGCTGAATTGCCACAGCAACACTaGCAGATACATGGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PSLFLVSLAGYRVLGKAELPQQH*QIHGHS Trigger: GCTGTGGCCATGTATCTGCCAGTGTTGCTGTGGCAA...TTCAGCCTTGCCAAGCACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTTCAGCTTGTTCCTTTAGCACTACTGTCCTCTGAATGTTCTAAACTGTCATCCCAGAAGACATaGGGGTCAGAGCTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TLLQLVPLALLSSECSKLSSQKT*GSELLC Trigger: GCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGA...CAGTTTAGAACATTCAGAGGACAGTAGTGCTAAAGGAACAAGCTGAAGCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 72 bp | TTGGCAGCAGCCTTTTCACCTCCTGACCTTCACTGGTaGGCTGTAGTATGCTTTGGACTATTAGGAATACAC | + |
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Preference number: 4 (lower is better) Translates to: LAAAFSPPDLHW*AVVCFGLLGIH Trigger: GTGTATTCCTAATAGTCCAAAGCATACTACAGCCAACCAGTGAAGGTCAGGAGGTGAAAAGGCTGCTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGCAGCGAGTCCCAGCATaGGCTATCCACGTATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCMLILLCLLFLCMEIRRQRVPA*AIHVCS Trigger: GCTGCATACGTGGATAGCTCATGCTGGGACTCGCTG...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTCCACGTATGCAGCCTaGCTGACACTGAAGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVSTYAA*LTLKLL Trigger: CAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGA...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGTCCTCAGGAGGTAGGTaGCCACTAGCCAATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVSSGGR*PLANGS Trigger: GCTCCCATTGGCTAGTGGCCACCTACCTCCTGAGGA...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | CCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCTTGGCAAGGCTGAAACCGACATAGCCGTGTaGGGTTGTATATTATCACTG | + |
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Preference number: 4 (lower is better) Translates to: PSLFLVSLAGYRVLGKAETDIAV*GCILSL Trigger: CAGTGATAATATACAACCTCACACGGCTATGTCGGT...TTCAGCCTTGCCAAGCACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | CCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCTTGGCAAGGCTGAACTAGCATCTTTCTACTaGGGAGATCAAAAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PSLFLVSLAGYRVLGKAELASFY*GDQKLG Trigger: TCCCAGCTTTTGATCTCCTCAGTAGAAAGATGCTAG...TTCAGCCTTGCCAAGCACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGCGGATCTGCAACATGTaGTGCACCAGGCGGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: TCMLILLCLLFLCMEIRRRICNM*CTRRME Trigger: TTCCATCCGCCTGGTGCAGCACATGTTGCAGATCCG...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR TCA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGTGGGAGAGAAACAGCTaGTCGGAGACCCTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVWERNS*SETLMR Trigger: TCTCATCAGGGTCTCCGATCAGCTGTTTCTCTCCCA...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGAATGGGAGCGCTGCTTaGATTCCAGGTACCGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVNGSAA*IPGTAL Trigger: TAGAGCGGTACCTGGAATGCAAGCAGCGCTCCCATT...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | CCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCTTGGCAAGGCTGAACAATATGGTGTATATTaGTGCACTGGAGACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: PSLFLVSLAGYRVLGKAEQYGVY*CTGDTH Trigger: GTGAGTGTCTCCAGTGCAGCAATATACACCATATTG...TTCAGCCTTGCCAAGCACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCAAGAAGACATCTAAATaGAATTGGCCAAGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: WRSEGNLENRFYPFTIWVKKTSK*NWPRYR Trigger: CCTGTACCTTGGCCAATTCCATTTAGATGTCTTCTT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGGAGACACTCACAATCTaGAATACAGACAGGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVETLTI*NTDREV Trigger: GACCTCCCTGTCTGTATTCCAGATTGTGAGTGTCTC...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGGCATGTGATCAGCTCTaGCACATGGGTCTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVACDQL*HMGLIM Trigger: CATGATGAGACCCATGTGCCAGAGCTGATCACATGC...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTCACTGGGACCAATATaGTGTATATTGCTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVSLGPI*CILLHW Trigger: CCAGTGCAGCAATATACACCATATTGGTCCCAGTGA...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | AAGATTCAACTTATGGCTTTGTCTCTGTCCTTATGTCCCAAAAGCAGATTACAAGGAGCATCTCATAGATaGATAGGAGTCCTTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KIQLMALSLSLCPKSRLQGASHR*IGVLCP Trigger: GGGACAAAGGACTCCTATCCATCTATGAGATGCTCC...TTGTAATCTGCTTTTGGGACATAAGGACAGAGACAAAGCCATAAGTTGAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTTCAGCTTGTTCCTTTAGCACTACTGTCCTCTGAATGTTCTAAACTGTCGATGTTGTGTTTCTaGGTGGTTGTATCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TLLQLVPLALLSSECSKLSMLCF*VVVSFN Trigger: GTTGAAGGATACAACCACCCAGAAACACAACATCGA...CAGTTTAGAACATTCAGAGGACAGTAGTGCTAAAGGAACAAGCTGAAGCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGGAGGAGATCAAAAGCTaGGAGCATCTCATAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: TCMLILLCLLFLCMEIRREEIKS*EHLIDG Trigger: TCCATCTATGAGATGCTCCCAGCTTTTGATCTCCTC...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 72 bp | AAGCGTATTGGACTCCTAAAGATTCAACTTATGGCTTaGTCTCTGTCCTTATGTCCCAAAAGCAGATTACAA | + |
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Preference number: 4 (lower is better) Translates to: KRIGLLKIQLMA*SLSLCPKSRLQ Trigger: TTGTAATCTGCTTTTGGGACATAAGGACAGAGACAAAGCCATAAGTTGAATCTTTAGGAGTCCAATACGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CCA 90 bp | ACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGTATGGAGATCAGAAGGTGTATATTGCTGCACTaGAGACACTCACAATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TCMLILLCLLFLCMEIRRCILLH*RHSQSG Trigger: TCCAGATTGTGAGTGTCTCCAGTGCAGCAATATACA...CCTTCTGATCTCCATACACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| 3UTR CAA 72 bp | GTGAATGGAGAATGTATAGAAGTGGATCGATGGGACTaGCATGTTAATACTCCTTTGTTTACTTTTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VNGECIEVDRWD*HVNTPLFTFLV Trigger: CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTCTATACATTCTCCATTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR GCA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGTATGGTGTATATTGCTaGACTGGAGACACTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVYGVYC*TGDTHN Trigger: ATTGTGAGTGTCTCCAGTGCAGCAATATACACCATA...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS GCA 90 bp | TCCGGGCCTTCTCTAGCTCATCCCAGAAGACATGGGGGTCAGAGCTaGTCTGCCGGATCTGCAACATGTGCTGCACCAGGCGGATGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SGPSLAHPRRHGGQS*SAGSATCAAPGGWN Trigger: GTTCCATCCGCCTGGTGCAGCACATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGAGCTAGAGAAGGCCCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS GCA 90 bp | GCCTTCTCTAGCTCATCCCAGAAGACATGGGGGTCAGAGCTGCTCTaGCGGATCTGCAACATGTGCTGCACCAGGCGGATGGAACGGTTG | + |
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Preference number: 5 (lower is better) Translates to: AFSSSSQKTWGSELL*RICNMCCTRRMERL Trigger: CAACCGTTCCATCCGCCTGGTGCAGCACATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGAGCTAGAGAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 90 bp | AAGTACCGTTCCTTCCGGGCCTTCTCTAGCTCATCCCAGAAGACATaGGGGTCAGAGCTGCTCTGCCGGATCTGCAACATGTGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KYRSFRAFSSSSQKT*GSELLCRICNMCCT Trigger: GGTGCAGCACATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGAGCTAGAGAAGGCCCGGAAGGAACGGTACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 90 bp | GGGAGGGCACAGCTACATATTGCCACAGCAACACTGGCAGATACATaGCCACAGCCAGAGCCAGTAGAGAGTAGGGAAGAGCCTTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRAQLHIATATLADT*PQPEPVESREEPCE Trigger: CTCACAAGGCTCTTCCCTACTCTCTACTGGCTCTGGCTGTGGCCATGTATCTGCCAGTGTTGCTGTGGCAATATGTAGCTGTGCCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS GCA 90 bp | CGTTCCTCAGGAGGTAGGTGGCCACTAGCCAATGGGAGCGCTGCTTaGATTCCAGGTACCGCTCTAGCAAGGGAAATTCAAAGTACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSGGRWPLANGSAA*IPGTALAREIQSTV Trigger: AACGGTACTTTGAATTTCCCTTGCTAGAGCGGTACCTGGAATGCAAGCAGCGCTCCCATTGGCTAGTGGCCACCTACCTCCTGAGGAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS TCA 90 bp | AGACACTCACAATCTGGAATACAGACAGGGAGGTCAGCCTGCATGTaGTCAGCTCTGGCACATGGGTCTCATCATGTAGCAGCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHSQSGIQTGRSACM*SALAHGSHHVAALS Trigger: AGACAGGGCTGCTACATGATGAGACCCATGTGCCAGAGCTGATCACATGCAGGCTGACCTCCCTGTCTGTATTCCAGATTGTGAGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CAA 90 bp | CCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCTTGGCAAGGCTGAACAATGGGAGCGCTGCTaGCATTCCAGGTACCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLFLVSLAGYRVLGKAEQWERC*HSRYRS Trigger: AGAGCGGTACCTGGAATGCAAGCAGCGCTCCCATTG...TTCAGCCTTGCCAAGCACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 90 bp | TGTAAAGCACAGAGGACTAATGACTGGATTTCTGATGAGAACTCCTaGGCGAAAGCTAGAGACATCAGCAGCAAGGGAAAGCCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CKAQRTNDWISDENS*AKARDISSKGKPTV Trigger: TACTGTGGGCTTTCCCTTGCTGCTGATGTCTCTAGCTTTCGCCCAGGAGTTCTCATCAGAAATCCAGTCATTAGTCCTCTGTGCTTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| CDS-3UTR CAA 90 bp | TGGAGATCAGAAGGTAACTTGGAGAATCGGTTCTATCCTTTCACCATTTGGGTCATGGATAGGAGTCCTTaGTCCCACCGACATAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WRSEGNLENRFYPFTIWVMDRSP*SHRHSR Trigger: ACGGCTATGTCGGTGGGACAAAGGACTCCTATCCAT...GACCCAAATGGTGAAAGGATAGAACCGATTCTCCAAGTTACCTTCTGATCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 90 bp | GGTTGTATATTATCACTGGGACCAATATGGTGTATATTGCTGCACTaGAGACACTCACAATCTGGAATACAGACAGGGAGGTCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCILSLGPIWCILLH*RHSQSGIQTGRSAC Trigger: GCAGGCTGACCTCCCTGTCTGTATTCCAGATTGTGAGTGTCTCCAGTGCAGCAATATACACCATATTGGTCCCAGTGATAATATACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 90 bp | GCCACAAAGGTCATAAAGTCAACCACTGTGTCGATGTTGTGTTTCTaGGTGGTTGTATCCTTCAACACACTTAAGACACTCAGCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ATKVIKSTTVSMLCF*VVVSFNTLKTLSQL Trigger: TAGCTGGCTGAGTGTCTTAAGTGTGTTGAAGGATACAACCACCCAGAAACACAACATCGACACAGTGGTTGACTTTATGACCTTTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS TCA 90 bp | TCTCATAGATGGATAGGAGTCCTTTGTCCCACCGACATAGCCGTGTaGGGTTGTATATTATCACTGGGACCAATATGGTGTATATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHRWIGVLCPTDIAV*GCILSLGPIWCILL Trigger: CAGCAATATACACCATATTGGTCCCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAAGGACTCCTATCCATCTATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS TCA 90 bp | GGTTCCGGAATGCTGCGATTACAGATGTGTGAACCATACCCAGATTaGAAGAAGGCTCTTTTATTTTGTAAAGCACAGAGGACTAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSGMLRLQMCEPYPD*KKALLFCKAQRTND Trigger: GTCATTAGTCCTCTGTGCTTTACAAAATAAAAGAGCCTTCTTTCAATCTGGGTATGGTTCACACATCTGTAATCGCAGCATTCCGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGCTTCAGCTTGTTCCTTTAGCACTACTGTCCTCTGAATGTTCTAAACTGCCAATATGGTGTATATaGCTGCACTGGAGACACTCA | + |
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Preference number: 5 (lower is better) Translates to: TLLQLVPLALLSSECSKLPIWCI*LHWRHS Trigger: TGAGTGTCTCCAGTGCAGCAATATACACCATATTGG...CAGTTTAGAACATTCAGAGGACAGTAGTGCTAAAGGAACAAGCTGAAGCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CAA 90 bp | GAAGTGGATCGATGGGACTTGCATGTTAATACTCCTTTGTTTACTTTTCTTGTGATCACATTGAGGTCATaGATGGGGCATCCTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EVDRWDLHVNTPLFTFLVITLRS*MGHPSI Trigger: GATGCTAGGATGCCCCATCAATGACCTCAATGTGAT...CACAAGAAAAGTAAACAAAGGAGTATTAACATGCAAGTCCCATCGATCCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CAA 90 bp | ACTTTGCTTCAGCTTGTTCCTTTAGCACTACTGTCCTCTGAATGTTCTAAACTGTGTGTTTCTGGGTGGTaGTATCCTTCAACACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: TLLQLVPLALLSSECSKLCVSGW*YPSTHL Trigger: TAAGTGTGTTGAAGGATACAACCACCCAGAAACACA...CAGTTTAGAACATTCAGAGGACAGTAGTGCTAAAGGAACAAGCTGAAGCAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CAA 90 bp | AAGATTCAACTTATGGCTTTGTCTCTGTCCTTATGTCCCAAAAGCAGATTACAATGTAGCAGCCCTGTCTaGATGAAGCAGTTAAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: KIQLMALSLSLCPKSRLQCSSPV*MKQLNS Trigger: CGAATTTAACTGCTTCATCAAGACAGGGCTGCTACA...TTGTAATCTGCTTTTGGGACATAAGGACAGAGACAAAGCCATAAGTTGAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS-3UTR CAA 90 bp | GATTACAAGTTAAAGCCATCATTATTTCTTGTCTCATTAGCAGGCTATAGAGTGCATAGCCGTGTGAGGTaGTATATTATCACTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: DYKLKPSLFLVSLAGYRVHSRVR*YIITGT Trigger: GGTCCCAGTGATAATATACAACCTCACACGGCTATG...CACTCTATAGCCTGCTAATGAGACAAGAAATAATGATGGCTTTAACTTGTAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS TCA 72 bp | CCATCTTATCCAGGGGCAGTTCCAGGCGCAGTCCTTTaGGCCGAGAGCCCCTGCGGTCAGGCAGCAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSYPGAVPGAVL*AESPCGQAAGH Trigger: ATGCCCTGCTGCCTGACCGCAGGGGCTCTCGGCTCAAAGGACTGCGCCTGGAACTGCCCCTGGATAAGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011262.4 ENSMUST00000142228.2 |
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| CDS CAA 72 bp | ACCATCTTATCCAGGGGCAGTTCCAGGCGCAGTCCTTaGAGCCGAGAGCCCCTGCGGTCAGGCAGCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TILSRGSSRRSP*SREPLRSGSRA Trigger: TGCCCTGCTGCCTGACCGCAGGGGCTCTCGGCTCAAAGGACTGCGCCTGGAACTGCCCCTGGATAAGATGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011262.4 ENSMUST00000142228.2 |
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| CDS GCA 72 bp | CAGAAGACATGGGGGTCAGAGCTGCTCTGCCGGATCTaGAACATGTGCTGCACCAGGCGGATGGAACGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QKTWGSELLCRI*NMCCTRRMERL Trigger: CAACCGTTCCATCCGCCTGGTGCAGCACATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS GCA 72 bp | TCTCTAGCTCATCCCAGAAGACATGGGGGTCAGAGCTaGTCTGCCGGATCTGCAACATGTGCTGCACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLAHPRRHGGQS*SAGSATCAAPG Trigger: GCCTGGTGCAGCACATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGAGCTAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | TCCTTCCGGGCCTTCTCTAGCTCATCCCAGAAGACATaGGGGTCAGAGCTGCTCTGCCGGATCTGCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: SFRAFSSSSQKT*GSELLCRICNM Trigger: CATGTTGCAGATCCGGCAGAGCAGCTCTGACCCCCATGTCTTCTGGGATGAGCTAGAGAAGGCCCGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS GCA 72 bp | GGAGGTAGGTGGCCACTAGCCAATGGGAGCGCTGCTTaGATTCCAGGTACCGCTCTAGCAAGGGAAATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GGRWPLANGSAA*IPGTALAREIQ Trigger: TTGAATTTCCCTTGCTAGAGCGGTACCTGGAATGCAAGCAGCGCTCCCATTGGCTAGTGGCCACCTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CAA 90 bp | TCCCAGCATGAGCTATCCACGTATGCAGCCTGCCTGACACTGAAGTaGCTGGGAGAGAAACAGCTGATCGGAGACCCTGATGAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQHELSTYAACLTLK*LGEKQLIGDPDENS Trigger: GGAGTTCTCATCAGGGTCTCCGATCAGCTGTTTCTCTCCCAGCAACTTCAGTGTCAGGCAGGCTGCATACGTGGATAGCTCATGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | GAGAAACAGCTGATCGGAGACCCTGATGAGAACTCCTaGGCGAAAGCTAGAGACATCAGCAGCAAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EKQLIGDPDENS*AKARDISSKGK Trigger: CTTTCCCTTGCTGCTGATGTCTCTAGCTTTCGCCCAGGAGTTCTCATCAGGGTCTCCGATCAGCTGTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | CAGCTACATATTGCCACAGCAACACTGGCAGATACATaGCCACAGCCAGAGCCAGTAGAGAGTAGGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLHIATATLADT*PQPEPVESREE Trigger: CTCTTCCCTACTCTCTACTGGCTCTGGCTGTGGCCATGTATCTGCCAGTGTTGCTGTGGCAATATGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS TCA 72 bp | TGGATAGGAGTCCTTTGTCCCACCGACATAGCCGTGTaGGGTTGTATATTATCACTGGGACCAATATGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WIGVLCPTDIAV*GCILSLGPIWC Trigger: ACACCATATTGGTCCCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAAGGACTCCTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CAA 72 bp | AGTCAACCACTGTGTCGATGTTGTGTTTCTGGGTGGTaGTATCCTTCAACACACTTAAGACACTCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQPLCRCCVSGW*YPSTHLRHSAS Trigger: GCTGGCTGAGTGTCTTAAGTGTGTTGAAGGATACAACCACCCAGAAACACAACATCGACACAGTGGTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | TTATCACTGGGACCAATATGGTGTATATTGCTGCACTaGAGACACTCACAATCTGGAATACAGACAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLGPIWCILLH*RHSQSGIQTGR Trigger: CCTCCCTGTCTGTATTCCAGATTGTGAGTGTCTCCAGTGCAGCAATATACACCATATTGGTCCCAGTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CAA 90 bp | TCTAAGCCAGCCACAAAGGTCATAAAGTCAACCACTGTGTCGATGTaGTGTTTCTGGGTGGTTGTATCCTTCAACACACTTAAGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: SKPATKVIKSTTVSM*CFWVVVSFNTLKTL Trigger: GAGTGTCTTAAGTGTGTTGAAGGATACAACCACCCAGAAACACAACATCGACACAGTGGTTGACTTTATGACCTTTGTGGCTGGCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CAA 72 bp | AGGAGTCCTTTGTCCCACCGACATAGCCGTGTGAGGTaGTATATTATCACTGGGACCAATATGGTGTATATT | + |
|
Preference number: 6 (lower is better) Translates to: RSPLSHRHSRVR*YIITGTNMVYI Trigger: AATATACACCATATTGGTCCCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAAGGACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | GTCATAAAGTCAACCACTGTGTCGATGTTGTGTTTCTaGGTGGTTGTATCCTTCAACACACTTAAGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: VIKSTTVSMLCF*VVVSFNTLKTL Trigger: GAGTGTCTTAAGTGTGTTGAAGGATACAACCACCCAGAAACACAACATCGACACAGTGGTTGACTTTATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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| CDS CCA 72 bp | GCTCTTTTATTTTGTAAAGCACAGAGGACTAATGACTaGATTTCTGATGAGAACTCCTGGGCGAAAGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALLFCKAQRTND*ISDENSWAKAR Trigger: TCTAGCTTTCGCCCAGGAGTTCTCATCAGAAATCCAGTCATTAGTCCTCTGTGCTTTACAAAATAAAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142228.2 |
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| CDS CAA 72 bp | GGTTGTATATTATCACTGGGACCAATATGGTGTATATaGCTGCACTGGAGACACTCACAATCTGGAATACAG | + |
|
Preference number: 6 (lower is better) Translates to: GCILSLGPIWCI*LHWRHSQSGIQ Trigger: CTGTATTCCAGATTGTGAGTGTCTCCAGTGCAGCAATATACACCATATTGGTCCCAGTGATAATATACAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011262.4 |
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