Pregenerated sensors for PANX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031934Ensembl transcript IDs: ENSMUST00000056755.8, ENSMUST00000164273.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCAGCGAGCAGTGGGAGAGGACAATCAGCTGAGGCTGGGGAGTaGCAGGACAGCTTGCCTGTACAGGAGCTGAGACCCAGGTCACAG | + |
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Preference number: 1 (lower is better) Translates to: RAASSGRGQSAEAGE*QDSLPVQELRPRSQ Trigger: CTGTGACCTGGGTCTCAGCTCCTGTACAGGCAAGCTGTCCTGTCACTCCCCAGCCTCAGCTGATTGTCCTCTCCCACTGCTCGCTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR GCA 90 bp | GCCTGTACAGGAGCTGAGACCCAGGTCACAGCCAACTTAGGACACTaGCGCGCATGCGCACAGGCTGACCTCCCTGGTAGGCCAGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ACTGAETQVTANLGH*RACAQADLPGRPEN Trigger: ATTCTCTGGCCTACCAGGGAGGTCAGCCTGTGCGCATGCGCGGCAGTGTCCTAAGTTGGCTGTGACCTGGGTCTCAGCTCCTGTACAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR GCA 90 bp | AGTCACCACGGTATGACTGTCTCCTTGGCCGGGTTCAGTCGGCACTaGCTCAACCTGCTGTCCCTGCAGAGTCAAAGGGCAGCGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SHHGMTVSLAGFSRH*LNLLSLQSQRAASS Trigger: ACTGCTCGCTGCCCTTTGACTCTGCAGGGACAGCAGGTTGAGGCAGTGCCGACTGAACCCGGCCAAGGAGACAGTCATACCGTGGTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | GAGTCACCATGGTATGACTGTCTCCTTCCGGGAGTCACCACGGTATaGCTGTCTCCTTGGCCGGGTTCAGTCGGCACTGCCTCAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: ESPWYDCLLPGVTTV*LSPWPGSVGTASTC Trigger: GCAGGTTGAGGCAGTGCCGACTGAACCCGGCCAAGGAGACAGTCATACCGTGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | CTCACACCTGTAGTGCCAACACGTGGGAGCCTGAGGGAAGAAGCGTaGGGAGAGCCTGATGGTGGCCTGAGCTATAAAGGGGAAGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LTPVVPTRGSLREEA*GEPDGGLSYKGEGV Trigger: GACCCCTTCCCCTTTATAGCTCAGGCCACCATCAGGCTCTCCTCACGCTTCTTCCCTCAGGCTCCCACGTGTTGGCACTACAGGTGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR CCA 90 bp | ATGAGGCTGAGCAGCTGGAAGATGCCCACGGCGATGAGCTTGCACTaGAAGCGATCGGGGATGGTGCTGTCATTTTTCAGGACGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: MRLSSWKMPTAMSLH*KRSGMVLSFFRTPD Trigger: ATCAGGCGTCCTGAAAAATGACAGCACCATCCCCGATCGCTTCCAGTGCAAGCTCATCGCCGTGGGCATCTTCCAGCTGCTCAGCCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR TCA 90 bp | TCTCCCCATTGTTTGCTGCAGCCTCGCTGCTCAGGTCCAAATCTTTaGACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCTTGGTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SPHCLLQPRCSGPNL*TPLSGCPGPLPWSV Trigger: TACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CCA 90 bp | GGAATCAGCAGAGCATACACAATGAGGTTAATGAGGCTGAGCAGCTaGAAGATGCCCACGGCGATGAGCTTGCACTGGAAGCGATCGGGG | + |
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Preference number: 1 (lower is better) Translates to: GISRAYTMRLMRLSS*KMPTAMSLHWKRSG Trigger: CCCCGATCGCTTCCAGTGCAAGCTCATCGCCGTGGGCATCTTCCAGCTGCTCAGCCTCATTAACCTCATTGTGTATGCTCTGCTGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR TCA 90 bp | GAGTCACCATGGTATGACTGTCTCCTTCCGGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGTCACCACGGTATGACTGTCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: ESPWYDCLLPGVTMV*LSPSGSHHGMTVSL Trigger: CAAGGAGACAGTCATACCGTGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | GAGTCACCATGGTATGACTGTCTCCTTCCGGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGTCACCATGGTATGACTGTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ESPWYDCLLPGVTMV*LSPSGSHHGMTVSF Trigger: GAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | ACTGGGAAGACTTCTGAAGCCTTCCTTCCGGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGTCACCATGGTATGACTGTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TGKTSEAFLPGVTMV*LSPSGSHHGMTVSF Trigger: GAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAAGGCTTCAGAAGTCTTCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | TGTCCCTGGGTAAACTGCAAATGTGCCAGAACTCTGCTTCCACAGTaGTCGGTGTGGCTTCGCTGCCACCCATGTGCATCTGCTTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: CPWVNCKCARTLLPQ*SVWLRCHPCASALQ Trigger: TTGCAAAGCAGATGCACATGGGTGGCAGCGAAGCCACACCGATCACTGTGGAAGCAGAGTTCTGGCACATTTGCAGTTTACCCAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR GCA 90 bp | GGACGGATTCAGAAGCCTCTGGCGAGAGTTCTTCTCCCCATTGTTTaGTGCAGCCTCGCTGCTCAGGTCCAAATCTTTGAACTCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: GRIQKPLARVLLPIV*CSLAAQVQIFELHS Trigger: AGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAGAACTCTCGCCAGAGGCTTCTGAATCCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CCA 90 bp | TCGCTGCTCAGGTCCAAATCTTTGAACTCCACTCTCTGGCTGCCCTaGTCCTCTCCCTTGGTCTGTAGGGACGTGGGAATTTTTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: SLLRSKSLNSTLWLP*SSPLVCRDVGIFPS Trigger: TGATGGAAAAATTCCCACGTCCCTACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR TCA 90 bp | ACTACAGATCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTaGAATTCAAGAAGGAAACCATTAGCAGGACGGATTCAGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: TTDPTGVRQPQKSQA*NSRRKPLAGRIQKP Trigger: AGGCTTCTGAATCCGTCCTGCTAATGGTTTCCTTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGATCTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CCA 90 bp | GGGCAGGATTTCATACACTTTGAGAATGTCCGTTTTCTGCCGGAATaGGATGAAGAACGTGTAGACGACCACGGGAATCAGCAGAGCATA | + |
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Preference number: 1 (lower is better) Translates to: GQDFIHFENVRFLPE*DEERVDDHGNQQSI Trigger: TATGCTCTGCTGATTCCCGTGGTCGTCTACACGTTCTTCATCCCATTCCGGCAGAAAACGGACATTCTCAAAGTGTATGAAATCCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR TCA 90 bp | TCTTCATGCACTTCAGTAAAACCTGCTCTCCTGTCTCAGGCACCCTaGCATCTATCGATAACCTCTAAACTCAGGTTTCCCACTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSCTSVKPALLSQAP*HLSITSKLRFPTGK Trigger: CTTCCCAGTGGGAAACCTGAGTTTAGAGGTTATCGATAGATGTCAGGGTGCCTGAGACAGGAGAGCAGGTTTTACTGAAGTGCATGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | TGTAAGTGGAATGCTGTCCCCTTCCTCCCTACACTCCAGAGATGCTaGACAGGGAAGCAGATGGGACAGAAATATGTGTCTGTAGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: CKWNAVPFLPTLQRC*TGKQMGQKYVSVAL Trigger: TAAAGCTACAGACACATATTTCTGTCCCATCTGCTTCCCTGTTCAGCATCTCTGGAGTGTAGGGAGGAAGGGGACAGCATTCCACTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR GCA 90 bp | TTAATCATGCCCAGGTTTGTCAGGAGTAGCATGGGGTCAATGCCCTaGCCATTGCTTTTAATGTTCTCCAGCACCTTCAGACACTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: LIMPRFVRSSMGSMP*PLLLMFSSTFRHLY Trigger: GTACAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATTGACCCCATGCTACTCCTGACAAACCTGGGCATGATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR TCA 90 bp | CACATTTTAGCCTGCAGCTCCTTTAAGAGGTTTATTCTGTATTGCTaGGACCAGGACCTTAAGACACCCACTTCCCTAGTCACTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: HILACSSFKRFILYC*DQDLKTPTSLVTAR Trigger: TCTTGCAGTGACTAGGGAAGTGGGTGTCTTAAGGTCCTGGTCTCAGCAATACAGAATAAACCTCTTAAAGGAGCTGCAGGCTAAAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | CTTCCCATGGAAGCACTTAGTTCCAAGTACCTCCCATGGAAGCACTaGGTTCAGCAGTACAATAAGCTTTCACATGTTCTTGACACCATC | + |
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Preference number: 1 (lower is better) Translates to: LPMEALSSKYLPWKH*VQQYNKLSHVLDTI Trigger: GATGGTGTCAAGAACATGTGAAAGCTTATTGTACTGCTGAACTCAGTGCTTCCATGGGAGGTACTTGGAACTAAGTGCTTCCATGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR CCA 90 bp | TTTGTGCTGCTCTTACACAGATTAAACCAAGCAGGATGTATATCCTaGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCTCAGGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FVLLLHRLNQAGCIS*EAEPSFTGTKSQGL Trigger: AAGACCCTGAGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACATCCTGCTTGGTTTAATCTGTGTAAGAGCAGCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR TCA 90 bp | CTTTTCTGTACACTCCCAAAGGCAGCTAACCACTTACATAACGTCTaGCTTCACCAAGAAGCAATTAGACTAGGTAAACAACTGTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LFCTLPKAANHLHNV*LHQEAIRLGKQLSL Trigger: TAGGGACAGTTGTTTACCTAGTCTAATTGCTTCTTGGTGAAGTCAGACGTTATGTAAGTGGTTAGCTGCCTTTGGGAGTGTACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR TCA 90 bp | ATCATTATCTGTGGAACTCAGTGCAGGGGACCAGAGTATGGCTCCTCCCACCACGCTGAGGCTGGGGAGTaGCAGGACAGCTTGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: IIICGTQCRGPEYGSSHHAEAGE*QDSLPV Trigger: TACAGGCAAGCTGTCCTGTCACTCCCCAGCCTCAGC...GTGGTGGGAGGAGCCATACTCTGGTCCCCTGCACTGAGTTCCACAGATAATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTTTAAAAGTCGCCCGCACGGGCCTCTCTGTGTCCCTGGGTAAACTGCAAAATGAGAGGGCCAAATaGAACAGAGGTCGGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VALKVARTGLSVSLGKLQNERAK*NRGRGP Trigger: GGGCCCCCGACCTCTGTTTCATTTGGCCCTCTCATT...TTGCAGTTTACCCAGGGACACAGAGAGGCCCGTGCGGGCGACTTTTAAAGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR CAA 90 bp | AGGTTAATGAGGCTGAGCAGCTGGAAGATGCCCACGGCGATGAGCTaGCACTGGAAGCGATCGGGGATGGTGCTGTCATTTTTCAGGACG | + |
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Preference number: 2 (lower is better) Translates to: RLMRLSSWKMPTAMS*HWKRSGMVLSFFRT Trigger: CGTCCTGAAAAATGACAGCACCATCCCCGATCGCTTCCAGTGCAAGCTCATCGCCGTGGGCATCTTCCAGCTGCTCAGCCTCATTAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CAA 90 bp | TTCTCCCCATTGTTTGCTGCAGCCTCGCTGCTCAGGTCCAAATCTTaGAACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCTTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: FSPLFAAASLLRSKS*NSTLWLPWSSPLVC Trigger: ACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTCCCAACACCTAGGGAGGCAGAGGCAAGTGGATCTCTGAGTTTGAGGCCAAACCTGGGAGGGCCCTaGGGACTGCCACTTAAACGT | + |
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Preference number: 2 (lower is better) Translates to: LVPTPREAEASGSLSLRPNLGGP*GLPLKR Trigger: ACGTTTAAGTGGCAGTCCTCAGGGCCCTCCCAGGTT...TGGCCTCAAACTCAGAGATCCACTTGCCTCTGCCTCCCTAGGTGTTGGGACTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGTCTCCTTCCGGGAGTCACCATGGTATGACTGTCTCCTTCCGGGAGTCTCAACCTGCTGTCCCTaGAGAGTCAAAGGGCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: MTVSFRESPWYDCLLPGVSTCCP*RVKGQR Trigger: TCGCTGCCCTTTGACTCTGCAGGGACAGCAGGTTGA...GACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGTGGCTTTGTCTTCAAGTACTaGTCCACGATTGGGTACTTG | + |
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Preference number: 2 (lower is better) Translates to: RSPRSSSTCQSRMLLLCGFVFKY*STIGYL Trigger: CAAGTACCCAATCGTGGAGCAGTACTTGAAGACAAA...GCCACAGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGTCCAAATCTTTGAACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCTTGGGAAGCGATCGGGGATaGTGCTGTCATTTTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRSKSLNSTLWLPWSSPLGSDRG*CCHFSG Trigger: TCCTGAAAAATGACAGCACCATCCCCGATCGCTTCC...CAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CAA 90 bp | TGGAAGCGATCGGGGATGGTGCTGTCATTTTTCAGGACGCCTGATTaGATGCTGCACAGAAACTCGTCCGAGAGTGAAGAGAGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WKRSGMVLSFFRTPD*MLHRNSSESEERLK Trigger: CTTCAGCCTCTCTTCACTCTCGGACGAGTTTCTGTGCAGCATCAAATCAGGCGTCCTGAAAAATGACAGCACCATCCCCGATCGCTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCATGTGCTTGCTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAAAACTCGTCCGAGAGTaGAGAGAGGCTGAAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: LPCACSLEAPGPLAPASPKLVRE*REAEVI Trigger: TATTACTTCAGCCTCTCTTCACTCTCGGACGAGTTT...TGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGTGTGTAGCCTTCAGACTTaGAATGTAGAACATCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LEAPGPLAPASPECCSSVCSLQT*NVEHRR Trigger: CCTTCGATGTTCTACATTTCAAGTCTGAAGGCTACA...CACAGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAAGGAAACCATTACTCTCTGGCTGCCCTaGTCCTCTCCCTTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: RGASATEVTGLKFKKETITLWLP*SSPLVC Trigger: ACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGT...AATGGTTTCCTTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR CAA 90 bp | TCCAAATCTTTGAACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCTaGGTCTGTAGGGACGTGGGAATTTTTCCATCAATGATGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: SKSLNSTLWLPWSSP*VCRDVGIFPSMMSI Trigger: GATGGACATCATTGATGGAAAAATTCCCACGTCCCTACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAAAAACAACAGAAGAATTCTGTAGCCAGGGCTACACAGAAAGAAACCCTGGGAGTCACCACGGTATaGCTGTCTCCTTGGCCGGGT | + |
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Preference number: 2 (lower is better) Translates to: QQKQQKNSVARATQKETLGVTTV*LSPWPG Trigger: ACCCGGCCAAGGAGACAGTCATACCGTGGTGACTCC...CAGGGTTTCTTTCTGTGTAGCCCTGGCTACAGAATTCTTCTGTTGTTTTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTTTAAAAGTCGCCCGCACGGGCCTCTCTGTGTCCCTGGGTAAACTGCAAGCTGTGTTCTCTTCATaGACTTCAGTAAAACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VALKVARTGLSVSLGKLQAVFSS*TSVKPA Trigger: AGCAGGTTTTACTGAAGTGCATGAAGAGAACACAGC...TTGCAGTTTACCCAGGGACACAGAGAGGCCCGTGCGGGCGACTTTTAAAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTATATCCTGGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCTCAGGGTCTATCTGTGGAACTCAGTaGAGGGGACCAGAGTATGGC | + |
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Preference number: 2 (lower is better) Translates to: MYILGGRAIFHRNKVSGSICGTQ*RGPEYG Trigger: GCCATACTCTGGTCCCCTGCACTGAGTTCCACAGAT...AGACCCTGAGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGCACACTTACTCTTGTaGGACGTTTCTAATCTATTC | + |
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Preference number: 2 (lower is better) Translates to: SLEAPGPLAPASPECCSSAHLLL*DVSNLF Trigger: GAATAGATTAGAAACGTCCCACAAGAGTAAGTGTGC...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
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| 3UTR CAA 90 bp | ATGCCCAGGTTTGTCAGGAGTAGCATGGGGTCAATGCCCTGCCCATaGCTTTTAATGTTCTCCAGCACCTTCAGACACTTGTACGATTTG | + |
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Preference number: 2 (lower is better) Translates to: MPRFVRSSMGSMPCP*LLMFSSTFRHLYDL Trigger: CAAATCGTACAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATTGACCCCATGCTACTCCTGACAAACCTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAAGCACACTTACTCTTGTGGGACGTTTCTAATCTATTCTTCTATGACGCTGAGAGGACAATCAGCTaGGGCTGGGGAGTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: HKAHLLLWDVSNLFFYDAERTIS*GWGVTG Trigger: TCCTGTCACTCCCCAGCCTCAGCTGATTGTCCTCTC...AGCGTCATAGAAGAATAGATTAGAAACGTCCCACAAGAGTAAGTGTGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCTATTTGTGCTGCTCTTACACAGATTAAACCAAGCAGGATGTATATCCCAACACGTGGGAGCCTaGGGGAAGAAGCGTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: IELFVLLLHRLNQAGCISQHVGA*GKKREE Trigger: CTCCTCACGCTTCTTCCCTCAGGCTCCCACGTGTTG...GGATATACATCCTGCTTGGTTTAATCTGTGTAAGAGCAGCACAAATAGCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGATTTCTATTTTCTGTGGTATTCTGTCATCTCTTAGTGCTCGCCTATGTCCTGCCAGTCCAGAATaGTGCTCCTCTGTGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RGISIFCGILSSLSARLCPASPE*CSSVAE Trigger: CTCAGCCACAGAGGAGCAGCATTCTGGACTGGCAGG...ACATAGGCGAGCACTAAGAGATGACAGAATACCACAGAAAATAGAAATCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGAAGCAGATGGGACAGAAATATGTGTCTGTAGCTTTAAAAGTCGCCCGCATGTGCATCTGCTTTaGAAGCCTCAGTGGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: NREADGTEICVCSFKSRPHVHLL*KPQWST Trigger: AGTGGACCACTGAGGCTTGCAAAGCAGATGCACATG...CGGGCGACTTTTAAAGCTACAGACACATATTTCTGTCCCATCTGCTTCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAAGGAAATTTTTCAGGACGCCTaGTTTGATGCTGCACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SNRGASATEVTGLKFKKEIFQDA*FDAAQK Trigger: TTTCTGTGCAGCATCAAATCAGGCGTCCTGAAAAAT...TTCCTTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGATTTCTATTTTCTGTGGTATTCTGTCATCTCTTAGTGCTCGCCTATGTCTGCTCCTCTGTGGCTaGGGCTCTGTGCTCTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: RGISIFCGILSSLSARLCLLLCG*GSVLLT Trigger: TGTTAAGAGCACAGAGCCTCAGCCACAGAGGAGCAG...ACATAGGCGAGCACTAAGAGATGACAGAATACCACAGAAAATAGAAATCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGTTCAGCAGTACAATAAGCTTTCACATGTTCTTGACACCATCATTTGGTTGCCTGTACAGGAGCTaGGACCCAGGTCACAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TEFSSTISFHMFLTPSFGCLYRS*DPGHSQ Trigger: TTGGCTGTGACCTGGGTCTCAGCTCCTGTACAGGCA...ACCAAATGATGGTGTCAAGAACATGTGAAAGCTTATTGTACTGCTGAACTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR GCA 90 bp | GGACACACACTACATCAATACCAAAAACATCTACTGCAAACTAACTACAGATCCCTCCCCATTGTTTGCTaGAGCCTCGCTGCTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GHTLHQYQKHLLQTNYRSLPIVC*SLAAQV Trigger: GACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAG...GGATCTGTAGTTAGTTTGCAGTAGATGTTTTTGGTATTGATGTAGTGTGTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCGTAACAGCCTTTCCACATGTTAAAACATACATGCAAACCAGATGTACAAAGGCCAGTCCAGAATGCTaGTCCTCTGTGGCTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVTAFPHVKTYMQTRCTKASPEC*SSVAEA Trigger: AGCCTCAGCCACAGAGGAGCAGCATTCTGGACTGGC...CTTTGTACATCTGGTTTGCATGTATGTTTTAACATGTGGAAAGGCTGTTACGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | GGACACACACTACATCAATACCAAAAACATCTACTGCAAACTAACTACAGATCCGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GHTLHQYQKHLLQTNYRSGVTMV*LSPSGS Trigger: ACTCCCGGAAGGAGACAGTCATACCATGGTGACTCC...GGATCTGTAGTTAGTTTGCAGTAGATGTTTTTGGTATTGATGTAGTGTGTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | AACACTTGTCACATTGCAGAATCATACAGTTTTCTCCTGTGGTTGAGGAAGAAACACTGGGAAGACTTCTaGAGCCTTCCTTCCGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NTCHIAESYSFLLWLRKKHWEDF*SLPSGS Trigger: ACTCCCGGAAGGAAGGCTTCAGAAGTCTTCCCAGTG...TTTCTTCCTCAACCACAGGAGAAAACTGTATGATTCTGCAATGTGACAAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTCATCCTCACATGTTTATTACCTCACAAAACAAAGCATCTTCCATGTGCTCTTCTCCCCATTGTTTaGTGCAGCCTCGCTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFILTCLLPHKTKHLPCALLPIV*CSLAAQ Trigger: CTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAG...AGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAAACATGTGAGGATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAAAAACAACAGAAGAATTCTGTAGCCAGGGCTACACAGAAAGAAACCCTGGTGGAAGACCCTAAATaGCAACAAACAGGACTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QQKQQKNSVARATQKETLVEDPK*QQTGLP Trigger: AGGGAGTCCTGTTTGTTGGCATTTAGGGTCTTCCAC...CAGGGTTTCTTTCTGTGTAGCCCTGGCTACAGAATTCTTCTGTTGTTTTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR CCA 90 bp | AACACTTGTCACATTGCAGAATCATACAGTTTTCTCCTGTGGTTGAGGAAGAAAGCCTCTCTGTGTCCCTaGGTAAACTGCAAATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NTCHIAESYSFLLWLRKKASLCP*VNCKCA Trigger: GGCACATTTGCAGTTTACCCAGGGACACAGAGAGGC...TTTCTTCCTCAACCACAGGAGAAAACTGTATGATTCTGCAATGTGACAAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTATTTGTGCTGCTCTTACACAGATTAAACCAAGCAGGATGTATATCCTGGTGATGTCCTGTAAGTaGAATGCTGTCCCCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RAICAALTQIKPSRMYILVMSCK*NAVPFL Trigger: GAGGAAGGGGACAGCATTCCACTTACAGGACATCAC...CAGGATATACATCCTGCTTGGTTTAATCTGTGTAAGAGCAGCACAAATAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCAATGAGGACTTCACACAAAGCACACTTACTCTTGTGGGACGTTTCTAATAGAGTGAAGAGAGGCTaGAGTAATAGCTCAAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PAMRTSHKAHLLLWDVSNRVKRG*SNSSSR Trigger: TCTACTTGAGCTATTACTTCAGCCTCTCTTCACTCT...ATTAGAAACGTCCCACAAGAGTAAGTGTGCTTTGTGTGAAGTCCTCATTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAGAAGGAAACCATTAGCAGGACGGATTCAGAAGCCTCTGGCGAGAGTTCTGCTCAAGTAGATACATaGCAACAGTATAACCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FKKETISRTDSEASGESSAQVDT*QQYNHK Trigger: TTTGTGGTTATACTGTTGGCATGTATCTACTTGAGC...AGAACTCTCGCCAGAGGCTTCTGAATCCGTCCTGCTAATGGTTTCCTTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 90 bp | TTAAAGTTAACCAATGTGACTCTAAACAAATGGCTGAGGTCACTGTaGTATCAGTTCCATGTTCTGCTCTCATTGGACAAAGTGCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LKLTNVTLNKWLRSL*YQFHVLLSLDKVPL Trigger: GAGGGGCACTTTGTCCAATGAGAGCAGAACATGGAACTGATACAACAGTGACCTCAGCCATTTGTTTAGAGTCACATTGGTTAACTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 90 bp | CATGGAAGCACTGAGTTCAGCAGTACAATAAGCTTTCACATGTTCTaGACACCATCATTTGGTCTCATCTTCTGGACTTTGTGGAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: HGSTEFSSTISFHMF*TPSFGLIFWTLWNE Trigger: TTCATTCCACAAAGTCCAGAAGATGAGACCAAATGATGGTGTCAAGAACATGTGAAAGCTTATTGTACTGCTGAACTCAGTGCTTCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAACAACAGAAGAATTCTGTAGCCAGGGCTACACAGAAAGAAACCCTGTCTCATTTATTCTGTATTGCTaGGACCAGGACCTTAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: KTTEEFCSQGYTERNPVSFILYC*DQDLKT Trigger: TGTCTTAAGGTCCTGGTCTCAGCAATACAGAATAAA...TGAGACAGGGTTTCTTTCTGTGTAGCCCTGGCTACAGAATTCTTCTGTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCATTATGTCTATTAGAGATTGGTAGGACACACACTACATCAATACCAAAAATGGGGTCAATGCCCTaGCCATTGCTTTTAATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: WPLCLLEIGRTHTTSIPKMGSMP*PLLLMF Trigger: GAACATTAAAAGCAATGGGCAGGGCATTGACCCCAT...TTTTGGTATTGATGTAGTGTGTGTCCTACCAATCTCTAATAGACATAATGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTATTTGTGCTGCTCTTACACAGATTAAACCAAGCAGGATGTATATCCTGGCACACTTACTCTTGTaGGACGTTTCTAATCTATTC | + |
|
Preference number: 2 (lower is better) Translates to: RAICAALTQIKPSRMYILAHLLL*DVSNLF Trigger: GAATAGATTAGAAACGTCCCACAAGAGTAAGTGTGC...CAGGATATACATCCTGCTTGGTTTAATCTGTGTAAGAGCAGCACAAATAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCATCCTCACATGTTTATTACCTCACAAAACAAAGCATCTTCCATGTGCTTCAGAAGTCACAGGCTTaGAATTCAAGAAGGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: VSSSHVYYLTKQSIFHVLQKSQA*NSRRKP Trigger: TGGTTTCCTTCTTGAATTTCAAGCCTGTGACTTCTG...AAGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAAACATGTGAGGATGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| 3UTR CAA 90 bp | TATTTAAGGAAACATCATAGCACAAAACTAAAGCACCATTTGCTGTaGTCTGCAGACACAACAGACTCTTTAGAAGAATGTCTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLRKHHSTKLKHHLL*SADTTDSLEECLCV Trigger: CACACACAGACATTCTTCTAAAGAGTCTGTTGTGTCTGCAGACAACAGCAAATGGTGCTTTAGTTTTGTGCTATGATGTTTCCTTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 90 bp | TTTCACATGTTCTTGACACCATCATTTGGTCTCATCTTCTGGACTTaGTGGAATGAATCTGAAGATGAACTTAAGTGTTTAAATCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: FHMFLTPSFGLIFWT*WNESEDELKCLNPF Trigger: GAATGGATTTAAACACTTAAGTTCATCTTCAGATTCATTCCACAAAGTCCAGAAGATGAGACCAAATGATGGTGTCAAGAACATGTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 90 bp | AAGTTTTATTTAAGGAAACATCATAGCACAAAACTAAAGCACCATTaGCTGTTGTCTGCAGACACAACAGACTCTTTAGAAGAATGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KFYLRKHHSTKLKHH*LLSADTTDSLEECL Trigger: CAGACATTCTTCTAAAGAGTCTGTTGTGTCTGCAGACAACAGCAAATGGTGCTTTAGTTTTGTGCTATGATGTTTCCTTAAATAAAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | GGAGCTGAGACCCAGGTCACAGCCAACTTAGGACACTaGCGCGCATGCGCACAGGCTGACCTCCCTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAETQVTANLGH*RACAQADLPGR Trigger: CCTACCAGGGAGGTCAGCCTGTGCGCATGCGCGGCAGTGTCCTAAGTTGGCTGTGACCTGGGTCTCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | CCGGGTTCAGTCGGCACTGCCTCAACCTGCTGTCCCTaGAGAGTCAAAGGGCAGCGAGCAGTGGGAGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSVGTASTCCP*RVKGQRAVGED Trigger: GTCCTCTCCCACTGCTCGCTGCCCTTTGACTCTGCAGGGACAGCAGGTTGAGGCAGTGCCGACTGAACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | ACCCAGGTCACAGCCAACTTAGGACACTGCCGCGCATaGGCACAGGCTGACCTCCCTGGTAGGCCAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQVTANLGHCRA*AQADLPGRPEN Trigger: ATTCTCTGGCCTACCAGGGAGGTCAGCCTGTGCGCATGCGCGGCAGTGTCCTAAGTTGGCTGTGACCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | CTGGGGAGTGACAGGACAGCTTGCCTGTACAGGAGCTaGGACCCAGGTCACAGCCAACTTAGGACACTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LGSDRTACLYRS*DPGHSQLRTLP Trigger: CGGCAGTGTCCTAAGTTGGCTGTGACCTGGGTCTCAGCTCCTGTACAGGCAAGCTGTCCTGTCACTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | TGGTATGACTGTCTCCTTCCGGGAGTCACCACGGTATaGCTGTCTCCTTGGCCGGGTTCAGTCGGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: WYDCLLPGVTTV*LSPWPGSVGTA Trigger: GGCAGTGCCGACTGAACCCGGCCAAGGAGACAGTCATACCGTGGTGACTCCCGGAAGGAGACAGTCATACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | CCTCAAGGAGCTAGGGGTGAGAATGAGAGGGCCAAATaGAACAGAGGTCGGGGGCCCAGGCACCCAGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: PQGARGENERAK*NRGRGPRHPVH Trigger: GTGTACTGGGTGCCTGGGCCCCCGACCTCTGTTTCATTTGGCCCTCTCATTCTCACCCCTAGCTCCTTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | AAGTCTCCAGGTCACCAGGTCACCAGACGGAAGGGCTaGCCTCCAGGCCAAAACCACTGCTGGGCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSPGHQVTRRKG*PPGQNHCWASA Trigger: TGCAGATGCCCAGCAGTGGTTTTGGCCTGGAGGTCAGCCCTTCCGTCTGGTGACCTGGTGACCTGGAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | GGTATGACTGTCTCCTTGGCCGGGTTCAGTCGGCACTaGCTCAACCTGCTGTCCCTGCAGAGTCAAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GMTVSLAGFSRH*LNLLSLQSQRA Trigger: TGCCCTTTGACTCTGCAGGGACAGCAGGTTGAGGCAGTGCCGACTGAACCCGGCCAAGGAGACAGTCATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | TGTTTGCTGCAGCCTCGCTGCTCAGGTCCAAATCTTTaGACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLLQPRCSGPNL*TPLSGCPGPLP Trigger: AGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR TCA 72 bp | GTGTCTAGCCCCTCACAGTGCCACTGGAAAGCGTGGTaGTGTCCTGTAAGTGGAATGCTGTCCCCTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSSPSQCHWKAW*CPVSGMLSPSS Trigger: GGAGGAAGGGGACAGCATTCCACTTACAGGACATCACCACGCTTTCCAGTGGCACTGTGAGGGGCTAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | TCGCTGCTCAGGTCCAAATCTTTGAACTCCACTCTCTaGCTGCCCTGGTCCTCTCCCTTGGTCTGTAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLRSKSLNSTL*LPWSSPLVCRD Trigger: GTCCCTACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTCATGTTCTGCTCTCATaGGACAAAGTGCCCCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLEAPGPLAPASPECCSSHVLLS*DKVPLA Trigger: AGCGAGGGGCACTTTGTCCAATGAGAGCAGAACATG...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | ACGGGCCTCTCTGTGTCCCTGGGTAAACTGCAAATGTaGCAGAACTCTGCTTCCACAGTGATCGGTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGLSVSLGKLQM*QNSASTVIGVA Trigger: AGCCACACCGATCACTGTGGAAGCAGAGTTCTGGCACATTTGCAGTTTACCCAGGGACACAGAGAGGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | CACAGCCTTCTACAGTCAGTGGAACAGCCCTCCCACTaGCCTCCTCCTGTGGAAGACCCTAAATGCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HSLLQSVEQPSH*PPPVEDPKCQQ Trigger: TTGTTGGCATTTAGGGTCTTCCACAGGAGGAGGGCAGTGGGAGGGCTGTTCCACTGACTGTAGAAGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | CACCATGGTATGACTGTCTCCTTCCGGGAGTCACCATaGTATGACTGTCTCCTTCCGGGAGTCACCACGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HHGMTVSFRESP*YDCLLPGVTTV Trigger: TACCGTGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTCTCAGGTCCAAATCTTaGAACTCCACTCTCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLEAPGPLAPASPECCSSLRSKS*NSTLWL Trigger: CAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAG...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR TCA 72 bp | TGGTATGACTGTCTCCTTCCGGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGTCACCACGGTATGACT | + |
|
Preference number: 3 (lower is better) Translates to: WYDCLLPGVTMV*LSPSGSHHGMT Trigger: AGTCATACCGTGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | AGGTCCAAATCTTTGAACTCCACTCTCTGGCTGCCCTaGTCCTCTCCCTTGGTCTGTAGGGACGTGGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: RSKSLNSTLWLP*SSPLVCRDVGI Trigger: AATTCCCACGTCCCTACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CCA 72 bp | CACCATGGTATGACTGTCTCCTTCCGGGAGTCACCATaGTATGACTGTCTCCTTCCGGGAGTCACCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HHGMTVSFRESP*YDCLLPGVTMV Trigger: TACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | GGAAGACTTCTGAAGCCTTCCTTCCGGGAGTCACCATaGTATGACTGTCTCCTTCCGGGAGTCACCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GRLLKPSFRESP*YDCLLPGVTMV Trigger: TACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAAGGCTTCAGAAGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | ACAGTGCCACTGGAAAGCGTGGTGATGTCCTGTAAGTaGAATGCTGTCCCCTTCCTCCCTACACTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TVPLESVVMSCK*NAVPFLPTLQR Trigger: TCTCTGGAGTGTAGGGAGGAAGGGGACAGCATTCCACTTACAGGACATCACCACGCTTTCCAGTGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | TGGTATGACTGTCTCCTTCCGGGAGTCACCATGGTATaGCTGTCTCCTTCCGGGAGTCACCATGGTATGACT | + |
|
Preference number: 3 (lower is better) Translates to: WYDCLLPGVTMV*LSPSGSHHGMT Trigger: AGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCATGGTGACTCCCGGAAGGAGACAGTCATACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | GTAAACTGCAAATGTGCCAGAACTCTGCTTCCACAGTaGTCGGTGTGGCTTCGCTGCCACCCATGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VNCKCARTLLPQ*SVWLRCHPCAS Trigger: AGATGCACATGGGTGGCAGCGAAGCCACACCGATCACTGTGGAAGCAGAGTTCTGGCACATTTGCAGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | AAGCCTCTGGCGAGAGTTCTTCTCCCCATTGTTTGCTaGAGCCTCGCTGCTCAGGTCCAAATCTTTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: KPLARVLLPIVC*SLAAQVQIFEL Trigger: GAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAGAACTCTCGCCAGAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR GCA 72 bp | CAGAAGCCTCTGGCGAGAGTTCTTCTCCCCATTGTTTaGTGCAGCCTCGCTGCTCAGGTCCAAATCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QKPLARVLLPIV*CSLAAQVQIFE Trigger: TTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAGAACTCTCGCCAGAGGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CCA 72 bp | AGAGCATACACAATGAGGTTAATGAGGCTGAGCAGCTaGAAGATGCCCACGGCGATGAGCTTGCACTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RAYTMRLMRLSS*KMPTAMSLHWK Trigger: CTTCCAGTGCAAGCTCATCGCCGTGGGCATCTTCCAGCTGCTCAGCCTCATTAACCTCATTGTGTATGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CCA 72 bp | AGAAGAATGTCTGTGTGTGGGGCCAAGCACCTTCCATaGAAGCACCGAGTTCCAAGCACCTTCCATGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRMSVCGAKHLP*KHRVPSTFHGS Trigger: ACTTCCATGGAAGGTGCTTGGAACTCGGTGCTTCCATGGAAGGTGCTTGGCCCCACACACAGACATTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCATCTTAATCATGCCCAGGTTTGTCAGGAGTAGCATGGGGTCAATGCCCTGCTTCAGGACGCCTGATTaGATGCTGCACAGAAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: SILIMPRFVRSSMGSMPCFRTPD*MLHRNS Trigger: CGAGTTTCTGTGCAGCATCAAATCAGGCGTCCTGAA...GCAGGGCATTGACCCCATGCTACTCCTGACAAACCTGGGCATGATTAAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR GCA 72 bp | CCCAGGTTTGTCAGGAGTAGCATGGGGTCAATGCCCTaGCCATTGCTTTTAATGTTCTCCAGCACCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PRFVRSSMGSMP*PLLLMFSSTFR Trigger: TCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATTGACCCCATGCTACTCCTGACAAACCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR TCA 72 bp | AATGCTGTCCCCTTCCTCCCTACACTCCAGAGATGCTaGACAGGGAAGCAGATGGGACAGAAATATGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NAVPFLPTLQRC*TGKQMGQKYVS Trigger: AGACACATATTTCTGTCCCATCTGCTTCCCTGTTCAGCATCTCTGGAGTGTAGGGAGGAAGGGGACAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | CCTTCCATGGAAGTACTGAGTTCCAAGCACTTCCCATaGAAGCACTTAGTTCCAAGTACCTCCCATGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSMEVLSSKHFP*KHLVPSTSHGS Trigger: GCTTCCATGGGAGGTACTTGGAACTAAGTGCTTCCATGGGAAGTGCTTGGAACTCAGTACTTCCATGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | GCCTGCAGCTCCTTTAAGAGGTTTATTCTGTATTGCTaGGACCAGGACCTTAAGACACCCACTTCCCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ACSSFKRFILYC*DQDLKTPTSLV Trigger: GACTAGGGAAGTGGGTGTCTTAAGGTCCTGGTCTCAGCAATACAGAATAAACCTCTTAAAGGAGCTGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | TTATTACCTCACAAAACAAAGCATCTTCCATGTGCTTaGTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLPHKTKHLPCA*SLEAPGPLAPA Trigger: GGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | CATTATCTGTGGAACTCAGTGCAGGGGACCAGAGTATaGCTCCTCCCACCACTACAGAGGGATTTCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: HYLWNSVQGTRV*LLPPLQRDFYF Trigger: AAAATAGAAATCCCTCTGTAGTGGTGGGAGGAGCCATACTCTGGTCCCCTGCACTGAGTTCCACAGATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | ACTTCAGTAAAACCTGCTCTCCTGTCTCAGGCACCCTaGCATCTATCGATAACCTCTAAACTCAGGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSVKPALLSQAP*HLSITSKLRFP Trigger: GGGAAACCTGAGTTTAGAGGTTATCGATAGATGTCAGGGTGCCTGAGACAGGAGAGCAGGTTTTACTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | TTCATACACTTTGAGAATGTCCGTTTTCTGCCGGAATaGGATGAAGAACGTGTAGACGACCACGGGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: FIHFENVRFLPE*DEERVDDHGNQ Trigger: CTGATTCCCGTGGTCGTCTACACGTTCTTCATCCCATTCCGGCAGAAAACGGACATTCTCAAAGTGTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CCA 72 bp | CCATCTTTCACAGGAACAAAGTCTCAGGGTCTTGGGTaGGAAAGAGTCGTAACAGCCTTTCCACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSFTGTKSQGLG*ERVVTAFPHVK Trigger: TTTAACATGTGGAAAGGCTGTTACGACTCTTTCCCACCCAAGACCCTGAGACTTTGTTCCTGTGAAAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | GGTTGTAGAGGCTCAAGTCATTGTAGCCTTCAGACTTaGAATGTAGAACATCGAAGGTGGGCAGGATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GCRGSSHCSLQT*NVEHRRWAGFH Trigger: ATGAAATCCTGCCCACCTTCGATGTTCTACATTTCAAGTCTGAAGGCTACAATGACTTGAGCCTCTACAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR TCA 72 bp | TCACTGTTCTTTCAAGAAATAAGGCTAAAATGCCAATaGTTGCCCCAAAGGAGCCATTCATCGCCACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLFFQEIRLKCQ*LPQRSHSSPLL Trigger: GAGCAGTGGCGATGAATGGCTCCTTTGGGGCAATCATTGGCATTTTAGCCTTATTTCTTGAAAGAACAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | CTCTTACACAGATTAAACCAAGCAGGATGTATATCCTaGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLHRLNQAGCIS*EAEPSFTGTKS Trigger: AGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACATCCTGCTTGGTTTAATCTGTGTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR GCA 72 bp | GATGGTGTCTGTTTTTCTAGGGAACACTTGTCACATTaGAGAATCATACAGTTTTCTCCTGTGGTTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DGVCFSREHLSH*RIIQFSPVVEE Trigger: TTCCTCAACCACAGGAGAAAACTGTATGATTCTGCAATGTGACAAGTGTTCCCTAGAAAAACAGACACCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | TCTGGCTTAAAGTTAACCAATGTGACTCTAAACAAATaGCTGAGGTCACTGTTGTATCAGTTCCATGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGLKLTNVTLNK*LRSLLYQFHVL Trigger: CAGAACATGGAACTGATACAACAGTGACCTCAGCCATTTGTTTAGAGTCACATTGGTTAACTTTAAGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CCA 72 bp | CACATGTTCTTGACACCATCATTTGGTCTCATCTTCTaGACTTTGTGGAATGAATCTGAAGATGAACTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HMFLTPSFGLIF*TLWNESEDELK Trigger: CTTAAGTTCATCTTCAGATTCATTCCACAAAGTCCAGAAGATGAGACCAAATGATGGTGTCAAGAACATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR TCA 72 bp | CTTTACCTAAACTTCAACTTAGAGAACCTTTATAGCTaGAGTAGTCATTGGCCTCTAGGAAAATACCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYLNFNLENLYS*SSHWPLGKYLE Trigger: TTCTAGGTATTTTCCTAGAGGCCAATGACTACTTCAGCTATAAAGGTTCTCTAAGTTGAAGTTTAGGTAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCATGTGCTTGCTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCACGAAGGCCAGCGAGATaGGCAGCAGAGGTAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPCACSLEAPGPLAPASPRRPAR*AAEVDP Trigger: TGGGTCTACCTCTGCTGCTCATCTCGCTGGCCTTCG...TGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTCCGATGGAGATCTCCTaGGCGAAGGCCAGCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLEAPGPLAPASPECCSSPMEIS*AKASEM Trigger: CATCTCGCTGGCCTTCGCTCAGGAGATCTCCATCGG...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | CTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGTGAGCAGCCCAGCAGTATaGATCCACAAAGGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPGPLAPASPECCSSVSSPAV*IHKGSL Trigger: CAGGCTGCCTTTGTGGATTCATACTGCTGGGCTGCT...CACAGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | AGGCTGAGCAGCTGGAAGATGCCCACGGCGATGAGCTaGCACTGGAAGCGATCGGGGATGGTGCTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWKMPTAMS*HWKRSGMVLSF Trigger: AAATGACAGCACCATCCCCGATCGCTTCCAGTGCAAGCTCATCGCCGTGGGCATCTTCCAGCTGCTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGAAGCGCCAGAAGAGTaGGGGCAGGTACAGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLEAPGPLAPASPECCSSEAPEE*GQVQEY Trigger: ATACTCCTGTACCTGCCCGCACTCTTCTGGCGCTTC...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TTGTTTGCTGCAGCCTCGCTGCTCAGGTCCAAATCTTaGAACTCCACTCTCTGGCTGCCCTGGTCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFAAASLLRSKS*NSTLWLPWSSP Trigger: GGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCAACACCTAGGGAGGCAGAGGCAAGTGGATCTCTGAGTTTGAGGCCACTTCTCCCCATTGTTTaGTGCAGCCTCGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPTPREAEASGSLSLRPLLPIV*CSLAAQ Trigger: CTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAG...TGGCCTCAAACTCAGAGATCCACTTGCCTCTGCCTCCCTAGGTGTTGGGACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCATGTGCTTGCTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGGAAGCGATCGGGGATaGTGCTGTCATTTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPCACSLEAPGPLAPASPGSDRG*CCHFSG Trigger: TCCTGAAAAATGACAGCACCATCCCCGATCGCTTCC...TGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | GGATTCAGAAGCCTCTGGCGAGAGTTCTTCTCCCCATaGTTTGCTGCAGCCTCGCTGCTCAGGTCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFRSLWREFFSP*FAAASLLRSKS Trigger: AGATTTGGACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAGAAGAACTCTCGCCAGAGGCTTCTGAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 72 bp | TTGAACTCCACTCTCTGGCTGCCCTGGTCCTCTCCCTaGGTCTGTAGGGACGTGGGAATTTTTCCATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LNSTLWLPWSSP*VCRDVGIFPSM Trigger: CATTGATGGAAAAATTCCCACGTCCCTACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGTGGAGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATCTCTTAGTGCTCGCCTATGTCTTTACTACCTGTTGCTACGCTCTGATGCCGATGGAGATCTCCTaGGCGAAGGCCAGCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CHLLVLAYVFTTCCYALMPMEIS*AKASEM Trigger: CATCTCGCTGGCCTTCGCTCAGGAGATCTCCATCGG...CATCAGAGCGTAGCAACAGGTAGTAAAGACATAGGCGAGCACTAAGAGATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTATTTTTCAGGACGCCTaGTTTGATGCTGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEAPGPLAPASPECCSSIFQDA*FDAAQK Trigger: TTTCTGTGCAGCATCAAATCAGGCGTCCTGAAAAAT...AGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAAGCAGATGGGACAGAAATATGTGTCTGTAGCTTTAAAAGTCGCCCGGCAGAGGTGTGGAGCTaGAGAGAAGCGCCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NREADGTEICVCSFKSRPAEVWS*REAPEE Trigger: CTCTTCTGGCGCTTCTCTGCAGCTCCACACCTCTGC...CGGGCGACTTTTAAAGCTACAGACACATATTTCTGTCCCATCTGCTTCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAAGCAGATGGGACAGAAATATGTGTCTGTAGCTTTAAAAGTCGCCCGCTCCCCATTGTTTGCTaGAGCCTCGCTGCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NREADGTEICVCSFKSRPLPIVC*SLAAQV Trigger: GACCTGAGCAGCGAGGCTGCAGCAAACAATGGGGAG...CGGGCGACTTTTAAAGCTACAGACACATATTTCTGTCCCATCTGCTTCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | CAGATCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAATTGTCAGGAGTAGCATaGGGTCAATGCCCTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QIQQGCVSHRSHRLEIQELSGVA*GQCPAH Trigger: ATGGGCAGGGCATTGACCCCATGCTACTCCTGACAA...TTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TCGGGGATGGTGCTGTCATTTTTCAGGACGCCTGATTaGATGCTGCACAGAAACTCGTCCGAGAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGMVLSFFRTPD*MLHRNSSESEE Trigger: CTCTTCACTCTCGGACGAGTTTCTGTGCAGCATCAAATCAGGCGTCCTGAAAAATGACAGCACCATCCCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR TCA 90 bp | GGACACACACTACATCAATACCAAAAACATCTACTGCAAACTAACTACAGATCCCCAGTCGCAGCCCCTTaGACTTGGGCTCGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHTLHQYQKHLLQTNYRSPVAAP*TWARWA Trigger: AGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGG...GGATCTGTAGTTAGTTTGCAGTAGATGTTTTTGGTATTGATGTAGTGTGTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | GTCGTAACAGCCTTTCCACATGTTAAAACATACATGCAAACCAGATGTACAAAGCCAGTCGCAGCCCCTTaGACTTGGGCTCGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVTAFPHVKTYMQTRCTKPVAAP*TWARWA Trigger: AGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGG...CTTTGTACATCTGGTTTGCATGTATGTTTTAACATGTGGAAAGGCTGTTACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | AATGCCCTGCCCATTGCTTTTAATGTTCTCCAGCACCTTCAGACACTTGTACGAAGCAGCCCAGCAGTATaGATCCACAAAGGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NALPIAFNVLQHLQTLVRSSPAV*IHKGSL Trigger: CAGGCTGCCTTTGTGGATTCATACTGCTGGGCTGCT...TCGTACAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGGAACAAAGTCTCAGGGTCTTGGGTGGGAAAGAGTCGTAACAGCCTTTTTTCCAGACTCGCTCTaGAGGGAGCTCTTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTGTKSQGLGWERVVTAFFPDSL*RELFCC Trigger: ACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAA...AAAGGCTGTTACGACTCTTTCCCACCCAAGACCCTGAGACTTTGTTCCTGTGAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | CAGATCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAATTATCTGGGTACCGATaGAGATCTCCTGAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIQQGCVSHRSHRLEIQELSGYR*RSPERR Trigger: CCTTCGCTCAGGAGATCTCCATCGGTACCCAGATAA...TTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTaGAAATTCAAGAAGGAAACCATTAGCAGGACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNRGASATEVTG*KFKKETISRTD Trigger: ATCCGTCCTGCTAATGGTTTCCTTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 72 bp | ATGTCACAGGCAGTAACAAGTGTGATGTCTGGGATGTaGAAGGCCCTCAAGGAGCTAGGGGTGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSQAVTSVMSGM*KALKELGVRMR Trigger: TCTCATTCTCACCCCTAGCTCCTTGAGGGCCTTCAACATCCCAGACATCACACTTGTTACTGCCTGTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCAATGAGGACTTCACACAAAGCACACTTACTCTTGTGGGACGTTTCTAATCCACGGCAATACATGTaGCCATCTTGTCCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAMRTSHKAHLLLWDVSNPRQYM*PSCPPP Trigger: TGGCGGTGGACAAGATGGTCACATGTATTGCCGTGG...ATTAGAAACGTCCCACAAGAGTAAGTGTGCTTTGTGTGAAGTCCTCATTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAACATCTACTGCAAACTAACTACAGATCCAACAGGGGTGCGTCAGCCACAGATAAACTTCAGGTCTaGGCAGAGGTGTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLLQTNYRSNRGASATDKLQV*AEVWSC Trigger: GCAGCTCCACACCTCTGCTCAGACCTGAAGTTTATC...TGTGGCTGACGCACCCCTGTTGGATCTGTAGTTAGTTTGCAGTAGATGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | AATGCCCTGCCCATTGCTTTTAATGTTCTCCAGCACCTTCAGACACTTGTACGATTTCCAGACTCGCTCTaGAGGGAGCTCTTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NALPIAFNVLQHLQTLVRFPDSL*RELFCC Trigger: ACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAA...TCGTACAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 72 bp | TTTGTCAGGAGTAGCATGGGGTCAATGCCCTGCCCATaGCTTTTAATGTTCTCCAGCACCTTCAGACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVRSSMGSMPCP*LLMFSSTFRHL Trigger: CAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGGGCAGGGCATTGACCCCATGCTACTCCTGACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 72 bp | AGGTCACTGTTGTATCAGTTCCATGTTCTGCTCTCATaGGACAAAGTGCCCCTCGCTGTGTTCTCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLYQFHVLLS*DKVPLAVFSSC Trigger: GCATGAAGAGAACACAGCGAGGGGCACTTTGTCCAATGAGAGCAGAACATGGAACTGATACAACAGTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAACAGTATAACCACAAATGTCACCAGCCGGCAGCTAATGTATTTCATGATCTTGTGCAGCCACAGTaGGAGGTTTCCAGACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQQYNHKCHQPAANVFHDLVQPQ*EVSRLA Trigger: AGCGAGTCTGGAAACCTCCCACTGTGGCTGCACAAG...ATCATGAAATACATTAGCTGCCGGCTGGTGACATTTGTGGTTATACTGTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTAACTACAGATCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTGTAGAACATCGAAGGTaGGCAGGATTTCATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: CKLTTDPTGVRQPQKSQAVEHRR*AGFHTL Trigger: AAGTGTATGAAATCCTGCCCACCTTCGATGTTCTAC...AGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGATCTGTAGTTAGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | TTCCAGAAAAAGGTTGTAGAGGCTCAAGTCATTGTAGCCTTCAGACTTGAAATGCCACGGCAATACATGTaGCCATCTTGTCCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FQKKVVEAQVIVAFRLEMPRQYM*PSCPPP Trigger: TGGCGGTGGACAAGATGGTCACATGTATTGCCGTGG...CATTTCAAGTCTGAAGGCTACAATGACTTGAGCCTCTACAACCTTTTTCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATATCCTGGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCTCAGGGTCTCCACGATTGGGTACTTaGAGTGGCTTTCAGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: MYILGGRAIFHRNKVSGSPRLGT*SGFQIS Trigger: AGATATCTGAAAGCCACTTCAAGTACCCAATCGTGG...AGACCCTGAGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | ATGTATATCCTGGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCTCAGGGTCTATGGGGTCAATGCCCTaGCCATTGCTTTTAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MYILGGRAIFHRNKVSGSMGSMP*PLLLMF Trigger: GAACATTAAAAGCAATGGGCAGGGCATTGACCCCAT...AGACCCTGAGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCACACTTACTCTTGTGGGACGTTTCTAATCTATTCTTCTATGACGCTCTTGTGCAGCCACAGTaGGAGGTTTCCAGACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HKAHLLLWDVSNLFFYDALVQPQ*EVSRLA Trigger: AGCGAGTCTGGAAACCTCCCACTGTGGCTGCACAAG...AGCGTCATAGAAGAATAGATTAGAAACGTCCCACAAGAGTAAGTGTGCTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TTTATTACCTCACAAAACAAAGCATCTTCCATGTGCTaGCTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FITSQNKASSMC*LSRSPRSSSTC Trigger: GCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGAACAAAGTCTCAGGGTCTTGGGTGGGAAAGAGTCGTAACAGCCTTTATTGGGTACTTGAAGTaGCTTTCAGATATCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTGTKSQGLGWERVVTAFIGYLK*LSDISH Trigger: GTGGGAGATATCTGAAAGCCACTTCAAGTACCCAAT...AAAGGCTGTTACGACTCTTTCCCACCCAAGACCCTGAGACTTTGTTCCTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TGTAGAACATCGAAGGTGGGCAGGATTTCATACACTTaGAGAATGTCCGTTTTCTGCCGGAATGGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRTSKVGRISYT*RMSVFCRNGMK Trigger: CTTCATCCCATTCCGGCAGAAAACGGACATTCTCAAAGTGTATGAAATCCTGCCCACCTTCGATGTTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| 3UTR CAA 72 bp | AAACAGAGGTCGGGGGCCCAGGCACCCAGTACACTCTaGATATTAGCTTTCCAACTTAGAAAGTATAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQRSGAQAPSTL*ILAFQLRKYKQ Trigger: TTGCTTATACTTTCTAAGTTGGAAAGCTAATATCAAGAGTGTACTGGGTGCCTGGGCCCCCGACCTCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | GCCTATGTCTTTACTACCTGTTGCTACGCTCTGATGTCACAGGCAGTAACAAGTTTTGTCTTCAAGTACTaGTCCACGATTGGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AYVFTTCCYALMSQAVTSFVFKY*STIGYL Trigger: CAAGTACCCAATCGTGGAGCAGTACTTGAAGACAAA...ACTTGTTACTGCCTGTGACATCAGAGCGTAGCAACAGGTAGTAAAGACATAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | ACAATTACTGATTCAAACCTACATGCTTCAGTGACAACTAACTTCACAGCTAAAACTCTCTGGCTGCCCTaGTCCTCTCCCTTGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TITDSNLHASVTTNFTAKTLWLP*SSPLVC Trigger: ACAGACCAAGGGAGAGGACCAGGGCAGCCAGAGAGT...TTTAGCTGTGAAGTTAGTTGTCACTGAAGCATGTAGGTTTGAATCAGTAATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCATTATGTCTATTAGAGATTGGTAGGACACACACTACATCAATACCAAAATCTCCCACAGACTTGTaGAGCCACAGTGGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLLEIGRTHTTSIPKSPTDL*SHSGRF Trigger: AAACCTCCCACTGTGGCTGCACAAGTCTGTGGGAGA...TTTTGGTATTGATGTAGTGTGTGTCCTACCAATCTCTAATAGACATAATGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGTTCAGCAGTACAATAAGCTTTCACATGTTCTTGACACCATCATTTGGTATCTCCCACAGACTCTaGCCCACATTCTCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: TEFSSTISFHMFLTPSFGISHRL*PTFSVT Trigger: AGTGACTGAGAATGTGGGGCAGAGTCTGTGGGAGAT...ACCAAATGATGGTGTCAAGAACATGTGAAAGCTTATTGTACTGCTGAACTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGTAATAGCTCAAGTAGATACATGCCAACAGTATAACCACAAATGTCACTTATCTGGGTACCGATaGAGATCTCCTGAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEVIAQVDTCQQYNHKCHLSGYR*RSPERR Trigger: CCTTCGCTCAGGAGATCTCCATCGGTACCCAGATAA...GTGACATTTGTGGTTATACTGTTGGCATGTATCTACTTGAGCTATTACTTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTAACAGCCTTTCCACATGTTAAAACATACATGCAAACCAGATGTACAAAGGTACTGCTCCACGATTaGGTACTTGAAGTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVTAFPHVKTYMQTRCTKVLLHD*VLEVAF Trigger: GAAAGCCACTTCAAGTACCCAATCGTGGAGCAGTAC...CTTTGTACATCTGGTTTGCATGTATGTTTTAACATGTGGAAAGGCTGTTACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | CCATTGCTTTTAATGTTCTCCAGCACCTTCAGACACTaGTACGATTTGAGCTCACTTATGTTCTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLMFSSTFRH*YDLSSLMFSSR Trigger: TCTGGAAGAGAACATAAGTGAGCTCAAATCGTACAAGTGTCTGAAGGTGCTGGAGAACATTAAAAGCAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATTTCTATTTTCTGTGGTATTCTGTCATCTCTTAGTGCTCGCCTATGTTGTAGCCTTCAGACTTaGAATGTAGAACATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGISIFCGILSSLSARLCCSLQT*NVEHRR Trigger: CCTTCGATGTTCTACATTTCAAGTCTGAAGGCTACA...ACATAGGCGAGCACTAAGAGATGACAGAATACCACAGAAAATAGAAATCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | ACAATTACTGATTCAAACCTACATGCTTCAGTGACAACTAACTTCACAGCTAAAAAACTCGTCCGAGAGTaGAGAGAGGCTGAAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: TITDSNLHASVTTNFTAKKLVRE*REAEVI Trigger: TATTACTTCAGCCTCTCTTCACTCTCGGACGAGTTT...TTTAGCTGTGAAGTTAGTTGTCACTGAAGCATGTAGGTTTGAATCAGTAATTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR TCA 90 bp | ACAATTACTGATTCAAACCTACATGCTTCAGTGACAACTAACTTCACAGCTAAAAGAGTGAAGAGAGGCTaGAGTAATAGCTCAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TITDSNLHASVTTNFTAKRVKRG*SNSSSR Trigger: TCTACTTGAGCTATTACTTCAGCCTCTCTTCACTCT...TTTAGCTGTGAAGTTAGTTGTCACTGAAGCATGTAGGTTTGAATCAGTAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCATTATGTCTATTAGAGATTGGTAGGACACACACTACATCAATACCAAAAGCTCAAGTAGATACATaGCAACAGTATAACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLLEIGRTHTTSIPKAQVDT*QQYNHK Trigger: TTTGTGGTTATACTGTTGGCATGTATCTACTTGAGC...TTTTGGTATTGATGTAGTGTGTGTCCTACCAATCTCTAATAGACATAATGGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| 3UTR CAA 72 bp | TTCTTGACACCATCATTTGGTCTCATCTTCTGGACTTaGTGGAATGAATCTGAAGATGAACTTAAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLTPSFGLIFWT*WNESEDELKCL Trigger: TAAACACTTAAGTTCATCTTCAGATTCATTCCACAAAGTCCAGAAGATGAGACCAAATGATGGTGTCAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCATGTGCTTGCTCTCTAGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCATCCAGTCGCAGCCCCTaGAACTTGGGCTCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPCACSLEAPGPLAPASPSSRSP*NLGSVG Trigger: GCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGA...TGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCTAGAGAGCAAGCACATGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCCCAGGTCCTCTAGCACCTGCCAGTCCAGAATGCTGCTCCTCTGTGGCATATCTCCCACAGACTaGTGCAGCCACAGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRSSSTCQSRMLLLCGISPTD*CSHSGR Trigger: CCTCCCACTGTGGCTGCACAAGTCTGTGGGAGATAT...GCCACAGAGGAGCAGCATTCTGGACTGGCAGGTGCTAGAGGACCTGGGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS TCA 90 bp | CTCGCTCTGCAGGGAGCTCTTCTGCTGTACAGCAGCCCAGCAGTATaGATCCACAAAGGCAGCCTGTCGCCAGGAGAAAGAACTCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LALQGALLLYSSPAV*IHKGSLSPGERTRG Trigger: TCCCCGAGTTCTTTCTCCTGGCGACAGGCTGCCTTTGTGGATTCATACTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTGCAGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS GCA 90 bp | CCCACAGACTTGTGCAGCCACAGTGGGAGGTTTCCAGACTCGCTCTaGAGGGAGCTCTTCTGCTGTACAGCAGCCCAGCAGTATGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTDLCSHSGRFPDSL*RELFCCTAAQQYES Trigger: GGATTCATACTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAACCTCCCACTGTGGCTGCACAAGTCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056755.8 |
||
| CDS GCA 90 bp | AGCCACAGTGGGAGGTTTCCAGACTCGCTCTGCAGGGAGCTCTTCTaGTGTACAGCAGCCCAGCAGTATGAATCCACAAAGGCAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSGRFPDSLCRELF*CTAAQQYESTKAAC Trigger: ACAGGCTGCCTTTGTGGATTCATACTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAACCTCCCACTGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS GCA 90 bp | GGGAAGAACTTGTGCAGCCACAGTGGGAGGTTTCCAGACTCGCTCTaGAGGGAGCTCTTCTGCTGTACAGCAGCCCAGCAGTATGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GKNLCSHSGRFPDSL*RELFCCTAAQQYES Trigger: GGATTCATACTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAACCTCCCACTGTGGCTGCACAAGTTCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CAGATCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAACGCAGCCCCTTGAACTaGGGCTCGGTGGGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QIQQGCVSHRSHRLEIQERSPLN*GSVGSF Trigger: GAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCG...TTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS TCA 90 bp | GCGGTTGTAGACTTTGTCAAGTTCCTCCATGATAAACTTCAGGTCTaGGCAGAGGTGTGGAGCTGCAGAGAAGCGCCAGAAGAGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVDFVKFLHDKLQV*AEVWSCREAPEECG Trigger: CCCGCACTCTTCTGGCGCTTCTCTGCAGCTCCACACCTCTGCTCAGACCTGAAGTTTATCATGGAGGAACTTGACAAAGTCTACAACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS GCA 90 bp | ACGATTGGGTACTTGAAGTGGCTTTCAGATATCTCCCACAGACTCTaGCCCACATTCTCAGTCACTCCTGGGGGTCCAGGTCCGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TIGYLKWLSDISHRL*PTFSVTPGGPGPSL Trigger: AAGAGACGGACCTGGACCCCCAGGAGTGACTGAGAATGTGGGGCAGAGTCTGTGGGAGATATCTGAAAGCCACTTCAAGTACCCAATCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | TCCAACAGGGGTGCGTCAGCCACAGAAGTCACAGGCTTGAAATTCAAGAAGGAAGAGTTCTTCTCCCCATaGTTTGCTGCAGCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNRGASATEVTGLKFKKEEFFSP*FAAASL Trigger: CAGCGAGGCTGCAGCAAACAATGGGGAGAAGAACTC...TTCCTTCTTGAATTTCAAGCCTGTGACTTCTGTGGCTGACGCACCCCTGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGGTTTCCCACTGGGAAGACTTCTGAAGCCTTCCTTCCGGGAGTCACCATGAGCACCTTCAGACACTaGTACGATTTGAGCTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LRFPTGKTSEAFLPGVTMSTFRH*YDLSSL Trigger: AAGTGAGCTCAAATCGTACAAGTGTCTGAAGGTGCT...CATGGTGACTCCCGGAAGGAAGGCTTCAGAAGTCTTCCCAGTGGGAAACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATCCTCACATGTTTATTACCTCACAAAACAAAGCATCTTCCATGTGCTCGCAGCCCCTTGAACTaGGGCTCGGTGGGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFILTCLLPHKTKHLPCARSPLN*GSVGSF Trigger: GAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCG...AGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAAACATGTGAGGATGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCATCCTCACATGTTTATTACCTCACAAAACAAAGCATCTTCCATGTGCTTTCCAGTCGCAGCCCCTaGAACTTGGGCTCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSHVYYLTKQSIFHVLSSRSP*NLGSVG Trigger: GCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGA...AAGCACATGGAAGATGCTTTGTTTTGTGAGGTAATAAACATGTGAGGATGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CAACAAAAACAACAGAAGAATTCTGTAGCCAGGGCTACACAGAAAGAAACCCTGAAATCTCGAGCACTCTaGGCAGCCTTGATGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQKQQKNSVARATQKETLKSRAL*AALMAR Trigger: CCGCGCCATCAAGGCTGCCAAGAGTGCTCGAGATTT...CAGGGTTTCTTTCTGTGTAGCCCTGGCTACAGAATTCTTCTGTTGTTTTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAACATCTACTGCAAACTAACTACAGATCCAACAGGGGTGCGTCAGCCACACTCAGGTCCAAATCTTaGAACTCCACTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKHLLQTNYRSNRGASATLRSKS*NSTLWL Trigger: CAGCCAGAGAGTGGAGTTCAAAGATTTGGACCTGAG...TGTGGCTGACGCACCCCTGTTGGATCTGTAGTTAGTTTGCAGTAGATGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCAATGAGGACTTCACACAAAGCACACTTACTCTTGTGGGACGTTTCTAATTTCAGGACGCCTGATTaGATGCTGCACAGAAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAMRTSHKAHLLLWDVSNFRTPD*MLHRNS Trigger: CGAGTTTCTGTGCAGCATCAAATCAGGCGTCCTGAA...ATTAGAAACGTCCCACAAGAGTAAGTGTGCTTTGTGTGAAGTCCTCATTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | ACAATTACTGATTCAAACCTACATGCTTCAGTGACAACTAACTTCACAGCTAAACCCTGGTCCTCTCCCTaGGTCTGTAGGGACGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TITDSNLHASVTTNFTAKPWSSP*VCRDVG Trigger: TCCCACGTCCCTACAGACCAAGGGAGAGGACCAGGG...TTTAGCTGTGAAGTTAGTTGTCACTGAAGCATGTAGGTTTGAATCAGTAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | ATGTATATCCTGGGAGGCAGAGCCATCTTTCACAGGAACAAAGTCTCAGGGTCTAGACACTTGTACGATTaGAGCTCACTTATGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MYILGGRAIFHRNKVSGSRHLYD*SSLMFS Trigger: AGAGAACATAAGTGAGCTCAAATCGTACAAGTGTCT...AGACCCTGAGACTTTGTTCCTGTGAAAGATGGCTCTGCCTCCCAGGATATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATTTCTATTTTCTGTGGTATTCTGTCATCTCTTAGTGCTCGCCTATGTTCCACGATTGGGTACTaGAAGTGGCTTTCAGATATC | + |
|
Preference number: 5 (lower is better) Translates to: RGISIFCGILSSLSARLCSTIGY*KWLSDI Trigger: GATATCTGAAAGCCACTTCAAGTACCCAATCGTGGA...ACATAGGCGAGCACTAAGAGATGACAGAATACCACAGAAAATAGAAATCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS CAA 72 bp | TTGTCCACCGCCAGCTCCAGTCGCAGCCCCTTGAACTaGGGCTCGGTGGGCTCCTTCAGCAAGAAGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTASSSRSPLN*GSVGSFSKKSE Trigger: CTCGGACTTCTTGCTGAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCGGTGGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS TCA 72 bp | CCATCTTGTCCACCGCCAGCTCCAGTCGCAGCCCCTTaGACTTGGGCTCGGTGGGCTCCTTCAGCAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSCPPPAPVAAP*TWARWAPSARS Trigger: ACTTCTTGCTGAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCGGTGGACAAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS CAA 72 bp | ACCATCTTGTCCACCGCCAGCTCCAGTCGCAGCCCCTaGAACTTGGGCTCGGTGGGCTCCTTCAGCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TILSTASSSRSP*NLGSVGSFSKK Trigger: CTTCTTGCTGAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCGGTGGACAAGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS GCA 72 bp | TTGTGCAGCCACAGTGGGAGGTTTCCAGACTCGCTCTaGAGGGAGCTCTTCTGCTGTACAGCAGCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSHSGRFPDSL*RELFCCTAAQQ Trigger: CTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTGCAGAGCGAGTCTGGAAACCTCCCACTGTGGCTGCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS CAA 90 bp | GTGACCATCTTGTCCACCGCCAGCTCCAGTCGCAGCCCCTTGAACTaGGGCTCGGTGGGCTCCTTCAGCAAGAAGTCCGAGAACACATAC | + |
|
Preference number: 6 (lower is better) Translates to: VTILSTASSSRSPLN*GSVGSFSKKSENTY Trigger: GTATGTGTTCTCGGACTTCTTGCTGAAGGAGCCCACCGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCGGTGGACAAGATGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS CAA 90 bp | GAGATGAGCAGCAGAGGTAGACCCACGGCAATACATGTGACCATCTaGTCCACCGCCAGCTCCAGTCGCAGCCCCTTGAACTTGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EMSSRGRPTAIHVTI*STASSSRSPLNLGS Trigger: CGAGCCCAAGTTCAAGGGGCTGCGACTGGAGCTGGCGGTGGACAAGATGGTCACATGTATTGCCGTGGGTCTACCTCTGCTGCTCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS TCA 72 bp | GAGAAGCAGCTTATCTGGGTACCGATGGAGATCTCCTaGGCGAAGGCCAGCGAGATGAGCAGCAGAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EKQLIWVPMEIS*AKASEMSSRGR Trigger: TCTACCTCTGCTGCTCATCTCGCTGGCCTTCGCTCAGGAGATCTCCATCGGTACCCAGATAAGCTGCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS TCA 72 bp | CAGGGAGCTCTTCTGCTGTACAGCAGCCCAGCAGTATaGATCCACAAAGGCAGCCTGTCGCCAGGAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QGALLLYSSPAV*IHKGSLSPGER Trigger: TCTTTCTCCTGGCGACAGGCTGCCTTTGTGGATTCATACTGCTGGGCTGCTGTACAGCAGAAGAGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056755.8 ENSMUST00000164273.9 |
||
| CDS TCA 72 bp | CTCTTAGGTCCAAATCTCGAGCACTCTTGGCAGCCTTaGTGGCGCGGTTGTAGACTTTGTCAAGTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLGPNLEHSWQP*WRGCRLCQVPP Trigger: TGGAGGAACTTGACAAAGTCTACAACCGCGCCATCAAGGCTGCCAAGAGTGCTCGAGATTTGGACCTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
||
| CDS CCA 72 bp | GTCTTCAAGTACTGCTCCACGATTGGGTACTTGAAGTaGCTTTCAGATATCTCCCACAGACTCTGCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: VFKYCSTIGYLK*LSDISHRLCPT Trigger: TGTGGGGCAGAGTCTGTGGGAGATATCTGAAAGCCACTTCAAGTACCCAATCGTGGAGCAGTACTTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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| CDS TCA 72 bp | TTTTTGTCTTCAAGTACTGCTCCACGATTGGGTACTTaGAGTGGCTTTCAGATATCTCCCACAGACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FLSSSTAPRLGT*SGFQISPTDSA Trigger: GGCAGAGTCTGTGGGAGATATCTGAAAGCCACTTCAAGTACCCAATCGTGGAGCAGTACTTGAAGACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164273.9 |
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