Pregenerated sensors for PANK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018846Ensembl transcript IDs: ENSMUST00000018990.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCAGTCAGATCCCCAAGCTGCAGATTTCAGCATCAGCCCACGCTaGCTTCAGAAAGACACTGGGTCAGACCCAGGTCTGCTCCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VQSDPQAADFSISPR*LQKDTGSDPGLLQS Trigger: TGACTGGAGCAGACCTGGGTCTGACCCAGTGTCTTTCTGAAGTCAGCGTGGGCTGATGCTGAAATCTGCAGCTTGGGGATCTGACTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR GCA 90 bp | GGAACTTACTCTGTAGACCAGGCTGCCCTTGAACTCAGATTCGCCTaGCTCTGCCTGCCAAGTGCAGAGATTAAAAGCATAGGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: GTYSVDQAALELRFA*LCLPSAEIKSIGHH Trigger: GTGGTGGCCTATGCTTTTAATCTCTGCACTTGGCAGGCAGAGGCAGGCGAATCTGAGTTCAAGGGCAGCCTGGTCTACAGAGTAAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR CCA 90 bp | AGCTGCAGATTTCAGCATCAGCCCACGCTGACTTCAGAAAGACACTaGGTCAGACCCAGGTCTGCTCCAGTCAGCTCACAAAGAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: SCRFQHQPTLTSERH*VRPRSAPVSSQRDL Trigger: AAGATCTCTTTGTGAGCTGACTGGAGCAGACCTGGGTCTGACCCAGTGTCTTTCTGAAGTCAGCGTGGGCTGATGCTGAAATCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR CCA 90 bp | ACACAGCAATCACCTGCACTCAAGGGTGCCATCCATTTAGAGCCTTaGAAGAGTCCAGTATTTGCAAATAATGAGAATCCCTTGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TQQSPALKGAIHLEP*KSPVFANNENPLRG Trigger: GCCCCTCAAGGGATTCTCATTATTTGCAAATACTGGACTCTTCCAAGGCTCTAAATGGATGGCACCCTTGAGTGCAGGTGATTGCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR TCA 90 bp | AGTCCTGGTCAACAACTAAAGAGAGACGTGAAGAAGCTAGGCCAATaGCCAGAACACTGTAAAACACTGTTCAAAGCAGAACGTCACATG | + |
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Preference number: 1 (lower is better) Translates to: SPGQQLKRDVKKLGQ*PEHCKTLFKAERHM Trigger: CATGTGACGTTCTGCTTTGAACAGTGTTTTACAGTGTTCTGGTCATTGGCCTAGCTTCTTCACGTCTCTCTTTAGTTGTTGACCAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR GCA 90 bp | GAAGGTACACATCAGCTTCCCGAGTTCAGATCTAATGATAAGAAATaGACATTTGGGCCTGAGATACACATGGTAGAGAAAGAGCATAGA | + |
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Preference number: 1 (lower is better) Translates to: EGTHQLPEFRSNDKK*TFGPEIHMVEKEHR Trigger: TCTATGCTCTTTCTCTACCATGTGTATCTCAGGCCCAAATGTGCATTTCTTATCATTAGATCTGAACTCGGGAAGCTGATGTGTACCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR TCA 90 bp | CCAGAACACTGTAAAACACTGTTCAAAGCAGAACGTCACATGTACTaGATATGTACGACAGCACAGTGTGTCCAATGGGAGAATATTTTA | + |
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Preference number: 1 (lower is better) Translates to: PEHCKTLFKAERHMY*ICTTAQCVQWENIL Trigger: TAAAATATTCTCCCATTGGACACACTGTGCTGTCGTACATATTCAGTACATGTGACGTTCTGCTTTGAACAGTGTTTTACAGTGTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR GCA 90 bp | TTTAAAACATTCTTTTTGATAGCATCTAATTCTGTCCATTACTACTaGTTATGGAAGGTACACATCAGCTTCCCGAGTTCAGATCTAATG | + |
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Preference number: 1 (lower is better) Translates to: FKTFFLIASNSVHYY*LWKVHISFPSSDLM Trigger: CATTAGATCTGAACTCGGGAAGCTGATGTGTACCTTCCATAAGCAGTAGTAATGGACAGAATTAGATGCTATCAAAAAGAATGTTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGAGACCAGGCTGCCCTTaGACTCAGATTCGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: DAGRMCWHMLLLLALGKQRPGCP*TQIRLP Trigger: AGGCAGGCGAATCTGAGTTCAAGGGCAGCCTGGTCT...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGGAAACTATAGCCAGATaGACTTCCCTCCCTCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: DAGRMCWHMLLLLALGKQETIAR*TSLPRE Trigger: TTCTCGAGGGAGGGAAGTTCATCTGGCTATAGTTTC...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGCTACCACCAAAACCATaGCTGACAATGCTCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: DAGRMCWHMLLLLALGKQLPPKP*LTMLLA Trigger: TGCTAAGAGCATTGTCAGCCATGGTTTTGGTGGTAG...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTTGGCAAAGCCCAGTGACAGACAATaGCTGCGGTTTCTGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: LRGWLSIIMHITSLALAKPSDRQ*LRFLDQ Trigger: CTGATCCAGAAACCGCAGTCATTGTCTGTCACTGGG...CTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCCTAGCTGGCCAGCATTaGTGTCACAATGAAGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLLAGQH*CHNEVH Trigger: GTGCACTTCATTGTGACAGCAATGCTGGCCAGCTAG...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGATCCATTTAGAGCCTTaGAAGAGTCCAGTATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: DAGRMCWHMLLLLALGKQIHLEP*KSPVFA Trigger: TGCAAATACTGGACTCTTCCAAGGCTCTAAATGGAT...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR CAA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTaGGCAAAGACTTTAACCACAGGAGAAATCCACTCCTCCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: LRGWLSIIMHITSLA*AKTLTTGEIHSSST Trigger: GGTGGAGGAGGAGTGGATTTCTCCTGTGGTTAAAGTCTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGAGACTCCAAAGTATGTaGTTATGCCCTCAATTTTAC | + |
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Preference number: 2 (lower is better) Translates to: DAGRMCWHMLLLLALGKQRLQSM*LCPQFY Trigger: GTAAAATTGAGGGCATAATCACATACTTTGGAGTCT...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCTTGAATGAGCCACTGTaGTATCCTGATGACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLLNEPL*YPDDTQ Trigger: CTGGGTGTCATCAGGATATCACAGTGGCTCATTCAA...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR CAA 90 bp | AAACAAAATTTTTGTGATGCAGGCCGGATGTGCTGGCACATGCTTTaGTTGCTAGCACTTGGAAAGCAGAGACAAGAGGATCTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KQNFCDAGRMCWHML*LLALGKQRQEDLWV Trigger: AACCCAGAGATCCTCTTGTCTCTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATCACAAAAATTTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTGTATTGCATTTAAGATGGAACGCTGGCTATCATACATACAAGAGGACTCCTTTGGTTCCCAGTaGCAGACAATGACTGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: RGCIAFKMERWLSYIQEDSFGSQ*QTMTAV Trigger: AACCGCAGTCATTGTCTGTCACTGGGAACCAAAGGA...GTCCTCTTGTATGTATGATAGCCAGCGTTCCATCTTAAATGCAATACAGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAAGCATCAGCCCACGCTaGCTTCAGAAAGACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGSISPR*LQKDTG Trigger: CCCAGTGTCTTTCTGAAGTCAGCGTGGGCTGATGCT...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTAGATTCGCCTGCCTCTaGCTGCCAAGTGCAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSRFACL*LPSAEI Trigger: AATCTCTGCACTTGGCAGGCAGAGGCAGGCGAATCT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGCCGGCTCTATCTAGTTaGGGCTGTCTCAAACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMPALSS*GCLKQK Trigger: TTTTTGTTTGAGACAGCCTCAACTAGATAGAGCCGG...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGGAACGTCACATGTACTaGATATGTACGACAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMERHMY*ICTTAQ Trigger: CTGTGCTGTCGTACATATTCAGTACATGTGACGTTC...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCTATCATACATACAAGAGGACATCAATCAGTGAGGGATACTTCCCATTAGTGACAGACAATGACTaGGGTTTCTGGATCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGYHTYKRTSISEGYFPLVTDND*GFWISS Trigger: AGAGCTGATCCAGAAACCGCAGTCATTGTCTGTCAC...TAATGGGAAGTATCCCTCACTGATTGATGTCCTCTTGTATGTATGATAGCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTTCGCCTGCCTCTGCCTaGCAAGTGCAGAGATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSSPASA*QVQRLK Trigger: TTTTAATCTCTGCACTTGGCAGGCAGAGGCAGGCGA...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCTTTGTTGCTAGCACTTaGAAAGCAGAGACAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLFVAST*KAETRG Trigger: TCCTCTTGTCTCTGCTTTCCAAGTGCTAGCAACAAA...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTACTTCAGAAAGACACTaGGTCAGACCCAGGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSTSERH*VRPRSA Trigger: AGCAGACCTGGGTCTGACCCAGTGTCTTTCTGAAGT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCCCTGTGACCACACAATaGTTAGAAAAACAGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLPVTTQ*LEKQVK Trigger: TTTGACCTGTTTTTCTAATCATTGTGTGGTCACAGG...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTAGCCGAGGAAGGCAATaGCTGTGTGTGTATACAGAT | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSSRGRQ*LCVYTD Trigger: ATCTGTATACACACACAGGCATTGCCTTCCTCGGCT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCTCTAACATAGGAGCTTaGGTGGGAAAAGACAACATA | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLSNIGA*VGKDNI Trigger: TATGTTGTCTTTTCCCACCCAAGCTCCTATGTTAGA...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR CAA 90 bp | TTAGAGCCTTGGAAGAGTCCAGTATTTGCAAATAATGAGAATCCCTaGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LEPWKSPVFANNENP*RGWLSIIMHITSLA Trigger: GGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAAGGGATTCTCATTATTTGCAAATACTGGACTCTTCCAAGGCTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCTTTTCATTTTGTAAATaGTGCTGGAACCGTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLFSFCK*CWNRVS Trigger: TGACACACGGTTCCAGCACCATTTACAAAATGAAAA...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTTGGCAAAGCTAAGTCACAGAAAATaGTCTTTGATTGCCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: LRGWLSIIMHITSLALAKLSHRK*SLIAST Trigger: TGTACTGGCAATCAAAGATCATTTTCTGTGACTTAG...CTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTTGTGGCTGTGAAATCTaGAAGGTGGTCAGTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSCGCEI*KVVSLK Trigger: TTTTAGACTGACCACCTTTCAGATTTCACAGCCACA...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTATAATGAGAATCCCTTaGGGGGCTGGCTTTCAATTA | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSIMRIP*GAGFQL Trigger: TAATTGAAAGCCAGCCCCTCAAGGGATTCTCATTAT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCCTATGTAAAATAAACTaGCCCAACAAATGGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KGSPKLEQQHLGMISSGLLCKIN*PNKWSC Trigger: ACAAGACCATTTGTTGGGGCAGTTTATTTTACATAG...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGGGCTTTCAATTATCATaGATATTACTAGCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMGFQLS*ILLALP Trigger: AGGCAAGGCTAGTAATATGCATGATAATTGAAAGCC...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGGTATTGCATTTAAGATaGAACGCTGGCTATCATACA | + |
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Preference number: 2 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMVLHLR*NAGYHT Trigger: TGTATGATAGCCAGCGTTCCATCTTAAATGCAATAC...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAAAGAAGCTAGGCCAATaGCCAGAACACTGTAAAACA | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGKKLGQ*PEHCKT Trigger: TGTTTTACAGTGTTCTGGTCATTGGCCTAGCTTCTT...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAAGACAAACTAGTTTGTaGGTTCAGTCAGATCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGRQTSL*VQSDPQ Trigger: TTGGGGATCTGACTGAACTCACAAACTAGTTTGTCT...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTTGTAGACTTAAAATGTaGACTGGGCAAACACTATCG | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSCRLKM*TGQTLS Trigger: CGATAGTGTTTGCCCAGTGCACATTTTAAGTCTACA...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAGGAAACTTTGAACACTaGGGTCTCAGAAACTACACT | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGGNFEH*GLRNYT Trigger: AGTGTAGTTTCTGAGACCCCAGTGTTCAAAGTTTCC...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGATTATCAAGAACCTCTTaGCAGTCTGCTGGAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGLSRTS*QSAGNF Trigger: AAAGTTTCCAGCAGACTGTCAAGAGGTTCTTGATAA...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTATTATGAGAGTATGTTaGTTCCTGCTCACTAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSIMRVC*FLLTSN Trigger: GTTACTAGTGAGCAGGAAGCAACATACTCTCATAAT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAAAGGCAGCAAAAACTTaGGGACACTTTTTCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGKAAKT*GHFFML Trigger: CAACATGAAAAAGTGTCCCCAAGTTTTTGCTGCCTT...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGATTTAAGATTTGTGTCTaGGCACACAGTACTACAATG | + |
|
Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGFKICV*AHSTTM Trigger: CATTGTAGTACTGTGTGCTCAGACACAAATCTTAAA...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTCTATTTGTGATAGCATaGATACAGGGAATTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSLFVIA*IQGISQ Trigger: TTGAGAAATTCCCTGTATGCATGCTATCACAAATAG...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAGACACTTTTTCATGTTaGTGTATTGAACTGGCTATC | + |
|
Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGDTFSC*CIELAI Trigger: GATAGCCAGTTCAATACAGCAACATGAAAAAGTGTC...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTAACTGCCCCAACAAATaGTCTTGTCTTTACTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSNCPNK*SCLYLK Trigger: TTTTAAGTAAAGACAAGACCATTTGTTGGGGCAGTT...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAGTGTATACAGATGACTaGAGAAGTCTAGTTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TRSFKHKINSSCSKPLFGVYTDD*RSLVKR Trigger: CCTTTTAACTAGACTTCTCCAGTCATCTGTATACAC...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTGCACAGTGTGTCCAATaGGAGAATATTTTAATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LNAWSSLNSNTVGERDKSAQCVQ*ENILIL Trigger: CAAAATTAAAATATTCTCCCATTGGACACACTGTGC...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | CCTGCCAGGAATGGAGCAACTGTTTGCTCTGGCTCCTaGCAACGGTGTCATTCTCACGGTGGCCACCGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PARNGATVCSGS*QRCHSHGGHRS Trigger: ACTTCGGTGGCCACCGTGAGAATGACACCGTTGCCAGGAGCCAGAGCAAACAGTTGCTCCATTCCTGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | CTTGAGCCCTGCCAGGAATGGAGCAACTGTTTGCTCTaGCTCCTGGCAACGGTGTCATTCTCACGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEPCQEWSNCLL*LLATVSFSRWP Trigger: TGGCCACCGTGAGAATGACACCGTTGCCAGGAGCCAGAGCAAACAGTTGCTCCATTCCTGGCAGGGCTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | CTGTTCTGGAACTTACTCTGTAGACCAGGCTGCCCTTaGACTCAGATTCGCCTGCCTCTGCCTGCCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFWNLLCRPGCP*TQIRLPLPAKC Trigger: GCACTTGGCAGGCAGAGGCAGGCGAATCTGAGTTCAAGGGCAGCCTGGTCTACAGAGTAAGTTCCAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | GATCCCCAAGCTGCAGATTTCAGCATCAGCCCACGCTaGCTTCAGAAAGACACTGGGTCAGACCCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DPQAADFSISPR*LQKDTGSDPGL Trigger: CAGACCTGGGTCTGACCCAGTGTCTTTCTGAAGTCAGCGTGGGCTGATGCTGAAATCTGCAGCTTGGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | GACCAGGCTGCCCTTGAACTCAGATTCGCCTGCCTCTaGCTGCCAAGTGCAGAGATTAAAAGCATAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DQAALELRFACL*LPSAEIKSIGH Trigger: GTGGCCTATGCTTTTAATCTCTGCACTTGGCAGGCAGAGGCAGGCGAATCTGAGTTCAAGGGCAGCCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | GTCATCTTGAGCCCTGCCAGGAATGGAGCAACTGTTTaGTCTGGCTCCTGGCAACGGTGTCATTCTCACGGT | + |
|
Preference number: 3 (lower is better) Translates to: VILSPARNGATV*SGSWQRCHSHG Trigger: ACCGTGAGAATGACACCGTTGCCAGGAGCCAGAGCAAACAGTTGCTCCATTCCTGGCAGGGCTCAAGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | ACAGAGAGTAAGGCAGCTTGCACTGAGCGACGTGTGTaGGGAAAGGAAGCCCTAAGCTGGAACAGCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: TESKAACTERRV*GKEALSWNSNT Trigger: GGTGTTGCTGTTCCAGCTTAGGGCTTCCTTTCCTCACACACGTCGCTCAGTGCAAGCTGCCTTACTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | GCAGAGGCAGAGGCAGATAGATTTGAGTTTGGGGTTTaGTTGGTCTACATAGCCAGTTCCCAGCCAACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: AEAEADRFEFGV*LVYIASSQPTG Trigger: GCCGGTTGGCTGGGAACTGGCTATGTAGACCAAGCAAACCCCAAACTCAAATCTATCTGCCTCTGCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | CTGCAATGTGTAAGTCATCTTGAGCCCTGCCAGGAATaGAGCAACTGTTTGCTCTGGCTCCTGGCAACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQCVSHLEPCQE*SNCLLWLLATV Trigger: CACCGTTGCCAGGAGCCAGAGCAAACAGTTGCTCCATTCCTGGCAGGGCTCAAGATGACTTACACATTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | TTTCAGCATCAGCCCACGCTGACTTCAGAAAGACACTaGGTCAGACCCAGGTCTGCTCCAGTCAGCTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FQHQPTLTSERH*VRPRSAPVSSQ Trigger: TTGTGAGCTGACTGGAGCAGACCTGGGTCTGACCCAGTGTCTTTCTGAAGTCAGCGTGGGCTGATGCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | TCTGTAGACCAGGCTGCCCTTGAACTCAGATTCGCCTaGCTCTGCCTGCCAAGTGCAGAGATTAAAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SVDQAALELRFA*LCLPSAEIKSI Trigger: TATGCTTTTAATCTCTGCACTTGGCAGGCAGAGGCAGGCGAATCTGAGTTCAAGGGCAGCCTGGTCTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | CCCGAACAAGCCAGGCTGTCAGACGCAAACACTGAGTaGCATCACTGTAGACTTAAAATGTGCACTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PEQARLSDANTE*HHCRLKMCTGQ Trigger: TTGCCCAGTGCACATTTTAAGTCTACAGTGATGTCACTCAGTGTTTGCGTCTGACAGCCTGGCTTGTTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | CTAGCACATGATAGGTCTGCAATGTGTAAGTCATCTTaGGCCCTGCCAGGAATGGAGCAACTGTTTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LAHDRSAMCKSS*ALPGMEQLFAL Trigger: CAGAGCAAACAGTTGCTCCATTCCTGGCAGGGCTCAAGATGACTTACACATTGCAGACCTATCATGTGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | AACTCCAACACAGTGGGTGAAAGAGACAAAAGTGTTTaGACCTCACTCACTGCAGGGTCCAGCGATTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSNTVGERDKSV*TSLTAGSSDYR Trigger: CCTGTAATCGCTGGACCCTGCAGTGAGTGAGGTTCAAACACTTTTGTCTCTTTCACCCACTGTGTTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCAGGCCGGATGTGCTGGCACATGCTTTTGTTGCTAGCACTTGGAAAGCAGAATCAAGAGGCTGTATaGCATTTAAGATGGAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: DAGRMCWHMLLLLALGKQNQEAV*HLRWNA Trigger: AGCGTTCCATCTTAAATGCAATACAGCCTCTTGATT...CTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCTTAAAAGGCAACCTTTaGGGGGAGAGGTGGTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KGSPKLEQQHLGMISSGLLKGNL*GERWCF Trigger: AAAACACCACCTCTCCCCCAAAAGGTTGCCTTTTAA...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | TGTCACCCACAAAACAGCTTTATTTTTAGGAGTGGATaGCTAACACACAGCAATCACCTGCACTCAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CHPQNSFIFRSG*LTHSNHLHSRV Trigger: CACCCTTGAGTGCAGGTGATTGCTGTGTGTTAGGCATCCACTCCTAAAAATAAAGCTGTTTTGTGGGTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | TCACCTGCACTCAAGGGTGCCATCCATTTAGAGCCTTaGAAGAGTCCAGTATTTGCAAATAATGAGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPALKGAIHLEP*KSPVFANNENP Trigger: GGGATTCTCATTATTTGCAAATACTGGACTCTTCCAAGGCTCTAAATGGATGGCACCCTTGAGTGCAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAAGCCCTAAGCTGGAACAGCAACACCTAGGAATGATTTCTTCAGGACTCATAAGAAATGCACATTaGGGCCTGAGATACACATGG | + |
|
Preference number: 3 (lower is better) Translates to: KGSPKLEQQHLGMISSGLIRNAH*GLRYTW Trigger: CCATGTGTATCTCAGGCCCAAATGTGCATTTCTTAT...GAGTCCTGAAGAAATCATTCCTAGGTGTTGCTGTTCCAGCTTAGGGCTTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAGAGTTTGGGGTTTGCTaGGTCTACATAGCCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRSFKHKINSSCSKPLFGEFGVC*VYIASS Trigger: GGAACTGGCTATGTAGACCAAGCAAACCCCAAACTC...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTTGGCAAAGTTTATCAAGAACCTCTaGACAGTCTGCTGGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: LRGWLSIIMHITSLALAKFIKNL*TVCWKL Trigger: AAGTTTCCAGCAGACTGTCAAGAGGTTCTTGATAAA...CTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGCAGAAAGACAAATTCTaGGTCTGTGATGCTTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMQKDKF*VCDAFM Trigger: CATAAAAGCATCACAGACCAAGAATTTGTCTTTCTG...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAAACAAACCTTTAATCTaGGCAGACAGAGGCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TRSFKHKINSSCSKPLFGNKPLI*ADRGRD Trigger: GTCTCTGCCTCTGTCTGCCAAGATTAAAGGTTTGTT...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATGCCTGGAGTTCACTTAACTCCAACACAGTGGGTGAAAGAGACAAAAGTGGTACTCTTTCAAAATaGACTGCACAAAACTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LNAWSSLNSNTVGERDKSGTLSK*TAQNSE Trigger: TTCTGAGTTTTGTGCAGTCAATTTTGAAAGAGTACC...ACTTTTGTCTCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | TTCTTTTTGATAGCATCTAATTCTGTCCATTACTACTaGTTATGGAAGGTACACATCAGCTTCCCGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FFLIASNSVHYY*LWKVHISFPSS Trigger: TGAACTCGGGAAGCTGATGTGTACCTTCCATAAGCAGTAGTAATGGACAGAATTAGATGCTATCAAAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | AAGTTCAACAATCAAGAGGCTGTATTGCATTTAAGATaGAACGCTGGCTATCATACATACAAGAGGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: KFNNQEAVLHLR*NAGYHTYKRTS Trigger: TGATGTCCTCTTGTATGTATGATAGCCAGCGTTCCATCTTAAATGCAATACAGCCTCTTGATTGTTGAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CCA 72 bp | ATTAACAAGCATACCTTTCATTTCAGTTTAAATGCCTaGAGTTCACTTAACTCCAACACAGTGGGTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: INKHTFHFSLNA*SSLNSNTVGER Trigger: TCTTTCACCCACTGTGTTGGAGTTAAGTGAACTCCAGGCATTTAAACTGAAATGAAAGGTATGCTTGTTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR GCA 72 bp | TTTACCAGGTCTTTTAAACATAAAATTAACAGCAGCTaGAGTAAGCCTTTGTTCGGAAGACAAACTAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FTRSFKHKINSS*SKPLFGRQTSL Trigger: CAAACTAGTTTGTCTTCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR TCA 72 bp | ACCACCAAAACCATGGCTGACAATGCTCTTAGCATTTaGAAGTTATCAGAATTTTTAGAAAGACTCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TTKTMADNALSI*KLSEFLERLFV Trigger: TACAAAGAGTCTTTCTAAAAATTCTGATAACTTTCAAATGCTAAGAGCATTGTCAGCCATGGTTTTGGTGGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CAA 72 bp | AGTCATCTTGAGCCCTGCCAGGAATGGAGCAACTGTTaGCTCTGGCTCCTGGCAACGGTGTCATTCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLEPCQEWSNC*LWLLATVSFSR Trigger: CCGTGAGAATGACACCGTTGCCAGGAGCCAGAGCAAACAGTTGCTCCATTCCTGGCAGGGCTCAAGATGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CAA 72 bp | GAGGCAGAGGCAGATAGATTTGAGTTTGGGGTTTGCTaGGTCTACATAGCCAGTTCCCAGCCAACCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAEADRFEFGVC*VYIASSQPTGS Trigger: AGAGCCGGTTGGCTGGGAACTGGCTATGTAGACCAAGCAAACCCCAAACTCAAATCTATCTGCCTCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CAA 72 bp | TTTTGTGATGCAGGCCGGATGTGCTGGCACATGCTTTaGTTGCTAGCACTTGGAAAGCAGAGACAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCDAGRMCWHML*LLALGKQRQED Trigger: ATCCTCTTGTCTCTGCTTTCCAAGTGCTAGCAACAAAAGCATGTGCCAGCACATCCGGCCTGCATCACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTATCATACATACAAGAGGACATCAATCAGTGAGGGATACTTCCCATTAACCTATCAGCTTGGGTaGTGTCACCTTTGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGYHTYKRTSISEGYFPLTYQLG*CHLWMP Trigger: TGGCATCCAAAGGTGACAGCACCCAAGCTGATAGGT...TAATGGGAAGTATCCCTCACTGATTGATGTCCTCTTGTATGTATGATAGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR TCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGGCATCGCTCGGGTTCTaGGGCATTAGCAAAATAATA | + |
|
Preference number: 4 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMASLGF*GISKII Trigger: TATTATTTTGCTAATGCCTCAGAACCCGAGCGATGC...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR TCA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGTTTCAGTTGACCCTTTaGCCAGTAATCCAAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMFQLTL*PVIQSI Trigger: TATGCTTTGGATTACTGGTCAAAGGGTCAACTGAAA...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTGTATTGCATTTAAGATGGAACGCTGGCTATCATACATACAAGAGGACAGCCAGTCAACAAACTaGATAAACCAAGAAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGCIAFKMERWLSYIQEDSQSTN*INQERC Trigger: GCACCTTTCTTGGTTTATGCAGTTTGTTGACTGGCT...GTCCTCTTGTATGTATGATAGCCAGCGTTCCATCTTAAATGCAATACAGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CAA 72 bp | CTTTATCAAGAACCTCTTGACAGTCTGCTGGAAACTTaGAACACTGGGGTCTCAGAAACTACACTGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LYQEPLDSLLET*NTGVSETTLKY Trigger: GTATTTCAGTGTAGTTTCTGAGACCCCAGTGTTCAAAGTTTCCAGCAGACTGTCAAGAGGTTCTTGATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| 3UTR CAA 72 bp | TGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTaGGCAAAGACTTTAACCACAGGAGAAATCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLSIIMHITSLA*AKTLTTGEIHS Trigger: GGAGTGGATTTCTCCTGTGGTTAAAGTCTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTATCATACATACAAGAGGACATCAATCAGTGAGGGATACTTCCCATTATCATCGAGAGAGTATTaGCACGTAAAAAGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGYHTYKRTSISEGYFPLSSREY*HVKSSQ Trigger: TTGGGAACTTTTTACGTGTCAATACTCTCTCGATGA...TAATGGGAAGTATCCCTCACTGATTGATGTCCTCTTGTATGTATGATAGCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTGTATTGCATTTAAGATGGAACGCTGGCTATCATACATACAAGAGGACGGAAATCTGATAAAGTaGAAGTTTCCTCTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGCIAFKMERWLSYIQEDGNLIK*KFPLRP Trigger: TGGACGAAGAGGAAACTTGCACTTTATCAGATTTCC...GTCCTCTTGTATGTATGATAGCCAGCGTTCCATCTTAAATGCAATACAGCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTTGGCAAAGGACCAACCTATCAGCTaGGGTGCTGTCACCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGWLSIIMHITSLALAKDQPIS*GAVTFG Trigger: TCCAAAGGTGACAGCACCCAAGCTGATAGGTTGGTC...CTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTGTATTGCATTTAAGATGGAACGCTGGCTATCATACATACAAGAGGACCATTCTGCTTGTCCATaGAAACTGACGGAATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: RGCIAFKMERWLSYIQEDHSACP*KLTESM Trigger: CATAGATTCCGTCAGTTTCAATGGACAAGCAGAATG...GTCCTCTTGTATGTATGATAGCCAGCGTTCCATCTTAAATGCAATACAGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGGCTGGCTTTCAATTATCATGCATATTACTAGCCTTGCCTTGGCAAAGATAATAGCATTCTGCTaGTCCATTGAAACTGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGWLSIIMHITSLALAKIIAFC*SIETDG Trigger: TCCGTCAGTTTCAATGGACAAGCAGAATGCTATTAT...CTTTGCCAAGGCAAGGCTAGTAATATGCATGATAATTGAAAGCCAGCCCCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| CDS-3UTR CAA 90 bp | CAATCCTTTCAGAAGAGCTTTAAAGTGTTCACCCTCTCCTGTGACCACACAATGTTCATCGAGAGAGTATaGACACGTAAAAAGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: QSFQKSFKVFTLSCDHTMFIERV*TRKKFP Trigger: TGGGAACTTTTTACGTGTCAATACTCTCTCGATGAA...CATTGTGTGGTCACAGGAGAGGGTGAACACTTTAAAGCTCTTCTGAAAGGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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| CDS-3UTR CAA 90 bp | ACCAGGTCTTTTAAACATAAAATTAACAGCAGCTGCAGTAAGCCTTTGTTCGGAGGTGGAGGTTTCCAATaGTGCGAAAATCTTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: TRSFKHKINSSCSKPLFGGGGFQ*CENLSQ Trigger: TTGAGAAAGATTTTCGCACAATTGGAAACCTCCACC...TCCGAACAAAGGCTTACTGCAGCTGCTGTTAATTTTATGTTTAAAAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018990.8 |
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