Pregenerated sensors for PANK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037514Ensembl transcript IDs: ENSMUST00000145904.2, ENSMUST00000150843.9, ENSMUST00000183349.2, ENSMUST00000183388.2, ENSMUST00000184105.9, ENSMUST00000184932.9
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAGCCAGAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTGCTGTaGACAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: SQPELEVSIPAPRLL*TGPPLPSATMQAIS Trigger: AGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR GCA 90 bp | ATCCTTCCCAGCCAGAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTaGTGTGAACAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: ILPSQSSRSPFQLQG*CEQAHPCLQLQCRP Trigger: TGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCTGGGAAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR GCA 90 bp | ACCAGTGTTAAGGGACTCATGTGGTTGAACCCTCAGCGCCGTCCATaGCTCTCCTTCCAGGCTGTGGTGGAGAATGTGACGGCTTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TSVKGLMWLNPQRRP*LSFQAVVENVTAWG Trigger: GCCCCAAGCCGTCACATTCTCCACCACAGCCTGGAAGGAGAGGCATGGACGGCGCTGAGGGTTCAACCACATGAGTCCCTTAACACTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR TCA 90 bp | ACAAGAGCCTTCTGTTGCCCCAGAGCTGGCACCAGAACCCATGGCTaGATGGCAGAATCCTTCCCAGCCAGAGCTCGAGGTCTCCATTCC | + |
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Preference number: 1 (lower is better) Translates to: TRAFCCPRAGTRTHG*MAESFPARARGLHS Trigger: GGAATGGAGACCTCGAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR CCA 90 bp | ACCAACAAGAGCCTTCTGTTGCCCCAGAGCTGGCACCAGAACCCATaGCTGAATGGCAGAATCCTTCCCAGCCAGAGCTCGAGGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TNKSLLLPQSWHQNP*LNGRILPSQSSRSP Trigger: TGGAGACCTCGAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR CCA 90 bp | AGTCAGCTGCTGGTGGGAGTCCAGAAAGCTCCACGTATGCCCAAGTaGGTGATGCTGGGATTCCAAAGCACCTCAGGGGTTAATAACGCT | + |
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Preference number: 1 (lower is better) Translates to: SQLLVGVQKAPRMPK*VMLGFQSTSGVNNA Trigger: AGCGTTATTAACCCCTGAGGTGCTTTGGAATCCCAGCATCACCCACTTGGGCATACGTGGAGCTTTCTGGACTCCCACCAGCAGCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR CCA 90 bp | ACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAGGAAGGTaGAGGAATGGCACTTTAGTCTTGTCGTTTAGCCCTATGGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TAWGHCLCLRTCPGR*RNGTLVLSFSPMGL Trigger: AAGCCCCATAGGGCTAAACGACAAGACTAAAGTGCCATTCCTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR GCA 90 bp | AGGTCTCCATTCCAGCTCCAAGGCTGCTGTGAACAGGCCCACCCTTaGCTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: RSPFQLQGCCEQAHP*LQLQCRPSLNIRCR Trigger: TCTGCATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR TCA 90 bp | CACTATTTAAAGGAAATAGAACCCATCCCCAGAATGACCCTGGGCTaGGCACAACTGAGGAAAGAAATAGACAGTGATGGTGTGGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: HYLKEIEPIPRMTLG*AQLRKEIDSDGVGH Trigger: GTGACCCACACCATCACTGTCTATTTCTTTCCTCAGTTGTGCTCAGCCCAGGGTCATTCTGGGGATGGGTTCTATTTCCTTTAAATAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR TCA 90 bp | GGTTCTAACAGACACTGCAAGTGGCTCCCAGTTCAGAAGTGGTTGTaGGGTGGAATGTGTGTATTTCTGCAAATAGTGCTGGAATCAACA | + |
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Preference number: 1 (lower is better) Translates to: GSNRHCKWLPVQKWL*GGMCVFLQIVLEST Trigger: TGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCACTTCTGAACTGGGAGCCACTTGCAGTGTCTGTTAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR GCA 90 bp | CACCCTTGCCTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATaGAGAACAATCCTGCCAAGTTTTCAGAAGCTTGAAATAACCCAT | + |
|
Preference number: 1 (lower is better) Translates to: HPCLQLQCRPSLNIR*RTILPSFQKLEITH Trigger: ATGGGTTATTTCAAGCTTCTGAAAACTTGGCAGGATTGTTCTGCATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR CCA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: IAIVLTLRKLPTNTT*LMFFNPSTWETEAH Trigger: GTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| 3UTR CCA 90 bp | GTAACCTGCTCCTTCACTGCCGATTATTATTATTTTCTTGTGCTCTaGGGTTCACTAACTCCTCCCACAAATAAATACATCCTCTGCGTT | + |
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Preference number: 1 (lower is better) Translates to: VTCSFTADYYYFLVL*GSLTPPTNKYILCV Trigger: AACGCAGAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATAATAATAATCGGCAGTGAAGGAGCAGGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR CCA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: IAIVLTLRKLPTNTT*LMFSLRAHILAMEP Trigger: TGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000183388.2 ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGCACCAGAACCCATGGCTGAATGGCAGAATCCTTCCCAGCCAGAGCTCGCTCCAAGGCTGCTGTaGACAGGCCCACCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ELAPEPMAEWQNPSQPELAPRLL*TGPPLP Trigger: AGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGC...GAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | CAAACCAACAAGAGCCTTCTGTTGCCCCAGAGCTGGCACCAGAACCCATGGCTGGCTCCAAGGCTGCTGTaGACAGGCCCACCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QTNKSLLLPQSWHQNPWLAPRLL*TGPPLP Trigger: AGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGC...CAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGTTGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGCACCAGAACCCATGGCTGAATGGCAGAATCCTTCCCAGCCAGAGCTCGCAGTCAGCTGCTGGTaGGAGTCCAGAAAGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: ELAPEPMAEWQNPSQPELAVSCW*ESRKLH Trigger: GTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGC...GAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAGGAAGGTGGAGACAAGAGCCTTCTGTTaGCCCAGAGCTGGCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: CDGLGPLPLSEDMSRKVETRAFC*PRAGTR Trigger: TCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGT...CTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCCCTGCAACACCCCGTGTACTGTGCTGCCAGCACAATGGAACCCTTAGTCGCAGTCAGCTGCTGGTaGGAGTCCAGAAAGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PSLQHPVYCAASTMEPLVAVSCW*ESRKLH Trigger: GTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGC...GACTAAGGGTTCCATTGTGCTGGCAGCACAGTACACGGGGTGTTGCAGGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGCCCCAGAGCTGGCACCAGAACCCATGGCTGAATGGCAGAATCCTTCCCCAAGCAGTCAGCTGCTaGTGGGAGTCCAGAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLPQSWHQNPWLNGRILPQAVSC*WESRKL Trigger: GAGCTTTCTGGACTCCCACCAGCAGCTGACTGCTTG...GGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | CCATCCCTGCAACACCCCGTGTACTGTGCTGCCAGCACAATGGAACCCTTAGTCGAACAGGCCCACCCTTaGCTTCAGCTACAATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLQHPVYCAASTMEPLVEQAHP*LQLQCR Trigger: CCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTC...GACTAAGGGTTCCATTGTGCTGGCAGCACAGTACACGGGGTGTTGCAGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTCCCAGCCAGAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTGCTGTGAAACAAGAGCCTTCTGTTaGCCCAGAGCTGGCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: ILPSQSSRSPFQLQGCCETRAFC*PRAGTR Trigger: TCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGT...TTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCTGGGAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | GGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGCCCCGTGTACTGTGCTaGCAGCACAATGGAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: GTLMGERHQATPHHALHLPRVLC*QHNGTL Trigger: AAGGGTTCCATTGTGCTGGCAGCACAGTACACGGGG...CAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTGGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGGTGCTCGGAAAACAGTaGTTTCAGCTGCCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RCGTLMGERHQATPHHALVLGKQ*FQLPLG Trigger: TCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCAC...CAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCCACACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCCGTCCATGCCTCTCCTTCCAGGCTGTGGTGGAGAATGTGACGGCTTGGCCAACTATATCCCTGTaGGAACTGAGAACCATCAAG | + |
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Preference number: 2 (lower is better) Translates to: QRRPCLSFQAVVENVTAWPTISL*ELRTIK Trigger: CTTGATGGTTCTCAGTTCCCACAGGGATATAGTTGG...CCAAGCCGTCACATTCTCCACCACAGCCTGGAAGGAGAGGCATGGACGGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTGGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGTATCCCTGTGGGAACTaGGAACCATCAAGCAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RCGTLMGERHQATPHHALYPCGN*EPSSRL Trigger: TAGCCTGCTTGATGGTTCTCAGTTCCCACAGGGATA...CAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCCACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGAGAATGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCATGGCACCAGAACCCATaGCTGAATGGCAGAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: VVENVTAWGHCLCLRTCPWHQNP*LNGRIL Trigger: AAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCA...TGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACATTCTCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGAACAGACACTGCAAGTaGCTCCCAGTTCAGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTLMGERHQATPHHALHLNRHCK*LPVQKW Trigger: CCACTTCTGAACTGGGAGCCACTTGCAGTGTCTGTT...CAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGAGAATGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAACATGTCCAGGAAGGTaGAGGAATGGCACTTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: VVENVTAWGHCLCLRTCPTCPGR*RNGTLV Trigger: GACTAAAGTGCCATTCCTCCACCTTCCTGGACATGT...TGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACATTCTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGTGGTGGTCTGAGTGGGAGAAGTaGAGTGGAGCTTTAGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LMGERHQATPHHALHLWWSEWEK*SGALGY Trigger: ATAGCCTAAAGCTCCACTTCACTTCTCCCACTCAGA...CCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATGGACAAGCAGTCAGCTaGTGGTGGGAGTCCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: NRPTLAFSYNAGHLLTSDGQAVS*WWESRK Trigger: CTTTCTGGACTCCCACCAGCAGCTGACTGCTTGTCC...ATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGACCCAGCCACTGATGCCCACAAGACATTACCTCTTTGCGTAGGCCAGCCTATCTCTATAACCGTTTaGTCTTGGACTCCCGGATCC | + |
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Preference number: 2 (lower is better) Translates to: LDPATDAHKTLPLCVGQPISITV*SWTPGS Trigger: GGATCCGGGAGTCCAAGAGCAAACGGTTATAGAGAT...AGGCTGGCCTACGCAAAGAGGTAATGTCTTGTGGGCATCAGTGGCTGGGTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGCTGTTTCAAAGACACGCTGTAGCTCAGATCATGACCTCACCAGTGTTACGGCTTGGGGCCATTaGCTCTGTCTGAGGACATGT | + |
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Preference number: 2 (lower is better) Translates to: TPAVSKTRCSSDHDLTSVTAWGH*LCLRTC Trigger: ACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGT...AACACTGGTGAGGTCATGATCTGAGCTACAGCGTGTCTTTGAAACAGCAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCCGTCCATGCCTCTCCTTCCAGGCTGTGGTGGAGAATGTGACGGCTTGGTGTCGTTTAGCCCTATaGGGCTTATTTACTAGATAT | + |
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Preference number: 2 (lower is better) Translates to: QRRPCLSFQAVVENVTAWCRLAL*GLFTRY Trigger: ATATCTAGTAAATAAGCCCCATAGGGCTAAACGACA...CCAAGCCGTCACATTCTCCACCACAGCCTGGAAGGAGAGGCATGGACGGCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | ACATTACCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGCCCCGTGTACTGTGCTaGCAGCACAATGGAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: TLPLCVGQPPPILVQATLPRVLC*QHNGTL Trigger: AAGGGTTCCATTGTGCTGGCAGCACAGTACACGGGG...CAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGGTAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCTCTGTGATCCTGAGGCTTGTTCGTCTAACACTGTGGGAGGAGCTTCAAGGAAGAACACAGCCCTaGCCCAGATGGAGAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LGSVILRLVRLTLWEELQGRTQP*PRWRNF Trigger: AAAGTTTCTCCATCTGGGGCAGGGCTGTGTTCTTCC...TTGAAGCTCCTCCCACAGTGTTAGACGAACAAGCCTCAGGATCACAGAGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTCATCATGTTTCCAAAACTTGAAGCCACAGCCCAGCCTGGCAAGCCAAACCCAACAGCTCGAGGAGTaGTCCAACGGCTCCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: CSSCFQNLKPQPSLASQTQQLEE*SNGSKI Trigger: TATTTTGGAGCCGTTGGAGCACTCCTCGAGCTGTTG...GGTTTGGCTTGCCAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
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| 3UTR CAA 90 bp | CAAATAGTGCTGGAATCAACAGGAAGACAGCTTGGCGAGACTCAGTaGAGCTTGAAAGTGGAACTGTCAGAGTGTAGACAGCAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QIVLESTGRQLGETQ*SLKVELSECRQQPG Trigger: CCCTGGCTGCTGTCTACACTCTGACAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAGCTGTCTTCCTGTTGATTCCAGCACTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACACGCTGTAGCGTATGCCCAAGTGGGTaGTGCTGGGATTCCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LFTGSGKATPAVSKTRCSVCPSG*CWDSKA Trigger: TGCTTTGGAATCCCAGCATCACCCACTTGGGCATAC...GCTACAGCGTGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR TCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACAAACCCATCCCCAGAATaGCCCTGGGCTGAGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: FVPLFTGSGKATPAVSKTNPSPE*PWAEHN Trigger: GTTGTGCTCAGCCCAGGGTCATTCTGGGGATGGGTT...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | AATATCCCTCGTGCTCGGAAAACAGTGCTTTCAGCTGCCCCTTGGACCAGTAATCCACAGATGTCTCTGTaGCAGGTTTCAGGAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NIPRARKTVLSAAPWTSNPQMSL*QVSGSP Trigger: AGGACTTCCTGAAACCTGCCACAGAGACATCTGTGG...ATTACTGGTCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCACGAGGGATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAATAGAACCCATCCCCAGAATGACCCTGGGCTGAGCACAACTGAGGAATGGCACCAGAACCCATaGCTGAATGGCAGAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: KGNRTHPQNDPGLSTTEEWHQNP*LNGRIL Trigger: AAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCA...TTCCTCAGTTGTGCTCAGCCCAGGGTCATTCTGGGGATGGGTTCTATTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | GTATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGAGTCACCTGAGGGATaGCAGGGAAGAACACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VSKFFVPLFTGSGKATPAESPEG*QGRTQP Trigger: GGGCTGTGTTCTTCCCTGCCATCCCTCAGGTGACTC...AGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
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| 3UTR-3UTR CCA 90 bp | ACATTACCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGCAAGATCCTCCTTACTaGCCGCCTCTCTCTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLPLCVGQPPPILVQATLQDPPY*PPLSSP Trigger: AGGAGAAGAGAGAGGCGGCCAGTAAGGAGGATCTTG...CAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGGTAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGCCAGCACTTCGGAGGTaGAGGCAACTAGATCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLPALRR*RQLDLQ Trigger: CTGCAGATCTAGTTGCCTTCACCTCCGAAGTGCTGG...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGGTTTCAGGAAGTCCTCTCGGTAAGTCAGGGTATCTTCAACAGCTCGAGATTTGTCCACTTTGGTaGTATCTCCACGAGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WQVSGSPLGKSGYLQQLEICPLW*YLHEMP Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGACAAAT...CTCGAGCTGTTGAAGATACCCTGACTTACCGAGAGGACTTCCTGAAACCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR CAA 90 bp | AAAGGCATCAGGCCACACCACACCATGCATTGCATTTGTGGTGGCTaGATGTATATAGCTTTGTCCTTTGACAGTCTGCCACATTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KGIRPHHTMHCICGG*MYIALSFDSLPHSQ Trigger: CTGGGAATGTGGCAGACTGTCAAAGGACAAAGCTATATACATCAAGCCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 90 bp | GCATACGCCAGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTCTTTAACCCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AYARSRIAIVLTLRK*PTNTTWLMFFNPST Trigger: AGTGCTGGGGTTAAAGAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCTGGCGTATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACCCTATAAACAGCAAATCCTCATACTGCCTAGACGGGGGTGGGATGGGGTGTTAATAACGCTGCCCTaGGAATACCCTATAAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: IPYKQQILILPRRGWDGVLITLP*EYPINS Trigger: GCTGTTTATAGGGTATTCTCAGGGCAGCGTTATTAA...CACCCCATCCCACCCCCGTCTAGGCAGTATGAGGATTTGCTGTTTATAGGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGCCAGCCTCAGCTATACAGTATTAATGTCGAGTTTGAGGTTAGCCACCAGAACCCATGGCTaGATGGCAGAATCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSKASLSYTVLMSSLRLATRTHG*MAESFP Trigger: TGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGT...GGCTAACCTCAAACTCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTGTGAGGTGGAATGTGTGTATTTCTGCAAATAGTGCTGGAATCAACAGGCAAATAGGAGTCACCTaGGGGATGGCAGGGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VVVRWNVCISANSAGINRQIGVT*GMAGKN Trigger: GTTCTTCCCTGCCATCCCTCAGGTGACTCCTATTTG...CCTGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | CTAGATCTGCAGTTCAAAGGCCAGCCTCAGCTATACAGTATTAATGTCGAGTTTGAACAGGCCCACCCTTaGCTTCAGCTACAATGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LDLQFKGQPQLYSINVEFEQAHP*LQLQCR Trigger: CCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTC...AAACTCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACTGCAGATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGAATAAATACATCCTCTaGGTTGTCTCTGACCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GTLMGERHQATPHHALHLNKYIL*VVSDPN Trigger: ATTTGGGTCAGAGACAACGCAGAGGATGTATTTATT...CAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCATCATGTTTCCAAAACTTGAAGCCACAGCCCAGCCTGGCAAGCCAAACCTCAAGGGCACACATTCTTaGTATGGAGCCAATGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LIMFPKLEATAQPGKPNLKGTHS*YGANVV Trigger: AACAACATTGGCTCCATAGCAAGAATGTGTGCCCTT...GAGGTTTGGCTTGCCAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR-3UTR GCA 90 bp | GCACGTATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCCAACAGCTCGAGGAGTaGTCCAACGGCTCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: ARIQILRSFVHRIRKSYPQQLEE*SNGSKI Trigger: TATTTTGGAGCCGTTGGAGCACTCCTCGAGCTGTTG...GGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATACGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGTGGCACACTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGATCAAAACAATGACCTaGATTGGACAGCTAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RCGTLMGERHQATPHHALIKTMT*IGQLRK Trigger: TTTTCTTAGCTGTCCAATCCAGGTCATTGTTTTGAT...CAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCCACACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 90 bp | GCATACGCCAGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: AYARSRIAIVLTLRK*PTNTTWLMFSLRAH Trigger: GTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCTGGCGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGCCAGCCTCAGCTATACAGTATTAATGTCGAGTTTGAGGTTAGCCTATCCCTGTGGGAACTaGGAACCATCAAGCAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSKASLSYTVLMSSLRLAYPCGN*EPSSRL Trigger: TAGCCTGCTTGATGGTTCTCAGTTCCCACAGGGATA...GGCTAACCTCAAACTCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGTGCTCCATAAAAGTGCAGTTTTaGGGATCTCTCAGAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PLCVGQPPPILVQATLCSIKVQF*GSLRSK Trigger: TTTGCTTCTGAGAGATCCTCAAAACTGCACTTTTAT...GGAGCACAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTAGAAGCACACAAGTCTaGGCTGGAGGCCAGTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: SNRVDSQEIADKYDLVNVRSTQV*AGGQSS Trigger: ACTAGACTGGCCTCCAGCTCAGACTTGTGTGCTTCT...AACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAAAGGCCAGCCTCAGCTATACAGTATTAATGTCGAGTTTGAGGTTAGCCGGAAGAACACAGCCCTaGCCCAGATGGAGAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSKASLSYTVLMSSLRLAGRTQP*PRWRNF Trigger: AAAGTTTCTCCATCTGGGGCAGGGCTGTGTTCTTCC...GGCTAACCTCAAACTCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACACGCTGTAGCGATGGTGATCAAAGTTaGTCTGGCAAGATCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LFTGSGKATPAVSKTRCSDGDQS*SGKILL Trigger: AAGGAGGATCTTGCCAGAGCAACTTTGATCACCATC...GCTACAGCGTGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACACCACAGATGTCTCTGTaGCAGGTTTCAGGAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FVPLFTGSGKATPAVSKTPQMSL*QVSGSP Trigger: AGGACTTCCTGAAACCTGCCACAGAGACATCTGTGG...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTAACAGACACTGCAAGTaGCTCCCAGTTCAGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VSKFFVPLFTGSGKATPANRHCK*LPVQKW Trigger: CCACTTCTGAACTGGGAGCCACTTGCAGTGTCTGTT...AGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCTTCTCCTTGCTCATCATGTTTCCAAAACTTGAAGCCACAGCCCAGCCTGAAAATAATAGCACTGTaGCCGTCCATTGAATCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSPCSSCFQNLKPQPSLKIIAL*PSIESN Trigger: GTTGGATTCAATGGACGGTCACAGTGCTATTATTTT...CAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGATGAGCAAGGAGAAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTTTCTTGTGCTCTGGGGTTCACTAACTCCTCCCACAAATAAATACATCCTCAAGACATTACCTCTTTaGGTAGGCCAGCCTCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YFLVLWGSLTPPTNKYILKTLPL*VGQPPP Trigger: GGGAGGAGGCTGGCCTACGCAAAGAGGTAATGTCTT...GAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACAATCTCTATAACCGTTTaGTCTTGGACTCCCGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: FVPLFTGSGKATPAVSKTISITV*SWTPGS Trigger: GGATCCGGGAGTCCAAGAGCAAACGGTTATAGAGAT...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACACGCTGTAGCAAGGGCACACATTCTTaGTATGGAGCCAATGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LFTGSGKATPAVSKTRCSKGTHS*YGANVV Trigger: AACAACATTGGCTCCATAGCAAGAATGTGTGCCCTT...GCTACAGCGTGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCATCATGTTTCCAAAACTTGAAGCCACAGCCCAGCCTGGCAAGCCAAACCTCCCGACAAATACGACCTaGTTAATGTTTTCATTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LIMFPKLEATAQPGKPNLPTNTT*LMFSLR Trigger: CCTTAATGAAAACATTAACCAGGTCGTATTTGTCGG...GAGGTTTGGCTTGCCAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR-3UTR CCA 90 bp | TACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCAATCAAGATCCTCCTTACTaGCCGCCTCTCTCTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YDLVNVFIKGTHSCYGANQDPPY*PPLSSP Trigger: AGGAGAAGAGAGAGGCGGCCAGTAAGGAGGATCTTG...ATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGAGGAAGACAGAACCATaGATACAAAGCACTGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLRKTEP*IQSTGH Trigger: GTGACCAGTGCTTTGTATTCATGGTTCTGTCTTCCT...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTTGTGAGGTGGAATGTGTGTATTTCTGCAAATAGTGCTGGAATCAACAGGCCAACTATATCCCTGTaGGAACTGAGAACCATCAAG | + |
|
Preference number: 2 (lower is better) Translates to: VVVRWNVCISANSAGINRPTISL*ELRTIK Trigger: CTTGATGGTTCTCAGTTCCCACAGGGATATAGTTGG...CCTGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTACTGTGACCGTCCATTaGATCCAACTGAGTCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: SNRVDSQEIADKYDLVNVTVTVH*IQLSQC Trigger: ACATTGACTCAGTTGGATTCAATGGACGGTCACAGT...AACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACACGCTGTAGCAATAAATACATCCTCTaGGTTGTCTCTGACCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFTGSGKATPAVSKTRCSNKYIL*VVSDPN Trigger: ATTTGGGTCAGAGACAACGCAGAGGATGTATTTATT...GCTACAGCGTGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGGAAGTGGTTGTGAGGTaGAATGTGTGTATTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLEVVVR*NVCISA Trigger: TGCAGAAATACACACATTCCACCTCACAACCACTTC...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTGGGAGAAGTGAAGTaGAGCTTTAGGCTATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSKFFVPLFTGSGKATPAVGEVK*SFRLSK Trigger: TTTTGATAGCCTAAAGCTCCACTTCACTTCTCCCAC...AGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACAGTGGGAGAAGTGAAGTaGAGCTTTAGGCTATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FVPLFTGSGKATPAVSKTVGEVK*SFRLSK Trigger: TTTTGATAGCCTAAAGCTCCACTTCACTTCTCCCAC...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATGAAATGCTGAGCCTCAGGTTTCATAGACGTGTTTGTACACTAAGAATTAGAATGACCCTGGGCTaGGCACAACTGAGGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VYEMLSLRFHRRVCTLRIRMTLG*AQLRKE Trigger: TTCTTTCCTCAGTTGTGCTCAGCCCAGGGTCATTCT...AATTCTTAGTGTACAAACACGTCTATGAAACCTGAGGCTCAGCATTTCATAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | AACCCAAATTATTTCAAGATGCTTTTATTCCAGTTAGCTCAGCACGTATCCAAACCACAGATGTCTCTGTaGCAGGTTTCAGGAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NPNYFKMLLFQLAQHVSKPQMSL*QVSGSP Trigger: AGGACTTCCTGAAACCTGCCACAGAGACATCTGTGG...TTTGGATACGTGCTGAGCTAACTGGAATAAAAGCATCTTGAAATAATTTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGCCGACAAATACGACCTaGTTAATGTTTTCATTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLPTNTT*LMFSLR Trigger: CCTTAATGAAAACATTAACCAGGTCGTATTTGTCGG...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACAAACCTGCTCCTTCACTaGCGATTATTATTATTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FVPLFTGSGKATPAVSKTNLLLH*RLLLFS Trigger: AGAAAATAATAATAATCGGCAGTGAAGGAGCAGGTT...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCAATGCCGACAAATACGACCTaGTTAATGTTTTCATTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTWLMFSLRAHILAMEPMPTNTT*LMFSLR Trigger: CCTTAATGAAAACATTAACCAGGTCGTATTTGTCGG...CATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000183388.2 ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR TCA 90 bp | AACCCAAATTATTTCAAGATGCTTTTATTCCAGTTAGCTCAGCACGTATCCAAAAGGTTTATGAAATGCTaGGCCTCAGGTTTCATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: NPNYFKMLLFQLAQHVSKRFMKC*ASGFID Trigger: GTCTATGAAACCTGAGGCTCAGCATTTCATAAACCT...TTTGGATACGTGCTGAGCTAACTGGAATAAAAGCATCTTGAAATAATTTGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTATGAAATGCTGAGCCTCAGGTTTCATAGACGTGTTTGTACACTAAGAATTAACAATGACCTGGATTaGACAGCTAAGAAAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: VYEMLSLRFHRRVCTLRINNDLD*TAKKRQ Trigger: TTGTCTTTTCTTAGCTGTCCAATCCAGGTCATTGTT...AATTCTTAGTGTACAAACACGTCTATGAAACCTGAGGCTCAGCATTTCATAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | GTTGCCCCAGAGCTGGCACCAGAACCCATGGCTGAATaGCAGAATCCTTCCCAGCCAGAGCTCGAGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAPELAPEPMAE*QNPSQPELEVS Trigger: GGAGACCTCGAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | AGCCTTCTGTTGCCCCAGAGCTGGCACCAGAACCCATaGCTGAATGGCAGAATCCTTCCCAGCCAGAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SLLLPQSWHQNP*LNGRILPSQSS Trigger: CGAGCTCTGGCTGGGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAGAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | GAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTGCTGTaGACAGGCCCACCCTTGCCTTCAGCTACAATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELEVSIPAPRLL*TGPPLPSATMQ Trigger: CTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | AGCCAGAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTaGTGTGAACAGGCCCACCCTTGCCTTCAGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SQSSRSPFQLQG*CEQAHPCLQLQ Trigger: TTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | AAGGGACTCATGTGGTTGAACCCTCAGCGCCGTCCATaGCTCTCCTTCCAGGCTGTGGTGGAGAATGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: KGLMWLNPQRRP*LSFQAVVENVT Trigger: CGTCACATTCTCCACCACAGCCTGGAAGGAGAGGCATGGACGGCGCTGAGGGTTCAACCACATGAGTCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | CCTCGTGCTCGGAAAACAGTGCTTTCAGCTGCCCCTTaGACCAGTAATCCAGCGCATACGCCAGAAGCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRARKTVLSAAP*TSNPAHTPEAA Trigger: TGCGGCTTCTGGCGTATGCGCTGGATTACTGGTCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCACGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000183349.2 ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | CTGGTGGGAGTCCAGAAAGCTCCACGTATGCCCAAGTaGGTGATGCTGGGATTCCAAAGCACCTCAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVGVQKAPRMPK*VMLGFQSTSGV Trigger: AACCCCTGAGGTGCTTTGGAATCCCAGCATCACCCACTTGGGCATACGTGGAGCTTTCTGGACTCCCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | GACCTGTCAACTTTTGCACTAGGGCGAGGTAAGGTGTaGCACACTGATGGGGGAAAGGCATCAGGCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: DLSTFALGRGKV*HTDGGKASGHT Trigger: GGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCCACACCTTACCTCGCCCTAGTGCAAAAGTTGACAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | CAAAGCACTGGTCACAACTGTCAAATAGGAGTCACCTaGGGGATGGCAGGGAAGAACACAGCCCTGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSTGHNCQIGVT*GMAGKNTALPQ Trigger: CTGGGGCAGGGCTGTGTTCTTCCCTGCCATCCCTCAGGTGACTCCTATTTGACAGTTGTGACCAGTGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | TTCCAGCTCCAAGGCTGCTGTGAACAGGCCCACCCTTaGCTTCAGCTACAATGCAGGCCATCTCTTAACATC | + |
|
Preference number: 3 (lower is better) Translates to: FQLQGCCEQAHP*LQLQCRPSLNI Trigger: GATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | AAAGCAGGGATTAGCAGGAGGGAAAACTACCATCCCTaGAACACCCCGTGTACTGTGCTGCCAGCACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: KAGISRRENYHP*NTPCTVLPAQW Trigger: CCATTGTGCTGGCAGCACAGTACACGGGGTGTTGCAGGGATGGTAGTTTTCCCTCCTGCTAATCCCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | TGGGAGTCCAGAAAGCTCCACGTATGCCCAAGTGGGTaGTGCTGGGATTCCAAAGCACCTCAGGGGTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: WESRKLHVCPSG*CWDSKAPQGLI Trigger: TATTAACCCCTGAGGTGCTTTGGAATCCCAGCATCACCCACTTGGGCATACGTGGAGCTTTCTGGACTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | ACATACATTTCAACAGGACAAGCAGTCAGCTGCTGGTaGGAGTCCAGAAAGCTCCACGTATGCCCAAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TYISTGQAVSCW*ESRKLHVCPSG Trigger: CCCACTTGGGCATACGTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGCTTGTCCTGTTGAAATGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | GGCCATTGCCTCTGTCTGAGGACATGTCCAGGAAGGTaGAGGAATGGCACTTTAGTCTTGTCGTTTAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHCLCLRTCPGR*RNGTLVLSFSP Trigger: AGGGCTAAACGACAAGACTAAAGTGCCATTCCTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAGACCCAGCCACTGATGCCCACAAGACATTACCTCTTTGCGTAGGCCAGCCTGAGACTCAGTTGAGCTaGAAAGTGGAACTGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LDPATDAHKTLPLCVGQPETQLS*KVELSE Trigger: CTCTGACAGTTCCACTTTCAAGCTCAACTGAGTCTC...AGGCTGGCCTACGCAAAGAGGTAATGTCTTGTGGGCATCAGTGGCTGGGTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGTGCTCCCTTGGCGAGACTCAGTaGAGCTTGAAAGTGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: PLCVGQPPPILVQATLCSLGETQ*SLKVEL Trigger: CAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAG...GGAGCACAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGAGAATGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCATGCATTTGTGGTGGCTaGATGTATATAGCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVENVTAWGHCLCLRTCPCICGG*MYIALS Trigger: GGACAAAGCTATATACATCAAGCCACCACAAATGCA...TGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACATTCTCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGGACGGCTTGGGGCCATaGCCTCTGTCTGAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLDGLGP*PLSEDM Trigger: CATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTC...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | CCTGGGCTGAGCACAACTGAGGAAAGAAATAGACAGTaGTGGTGTGGGTCACAACAGCACCACACATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PGLSTTEERNRQ*WCGSQQHHTSC Trigger: ACAGGATGTGTGGTGCTGTTGTGACCCACACCATCACTGTCTATTTCTTTCCTCAGTTGTGCTCAGCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | GCTACTTTGTGCTCCAGGGCCACAAACCTTCCTTTCTaGGTGGGAGAAGTGAAGTGGAGCTTTAGGCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: ATLCSRATNLPF*VGEVKWSFRLS Trigger: TGATAGCCTAAAGCTCCACTTCACTTCTCCCACTCAGAAAGGAAGGTTTGTGGCCCTGGAGCACAAAGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | ATTCTCACATACATTTCAACAGGACAAGCAGTCAGCTaGTGGTGGGAGTCCAGAAAGCTCCACGTATGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILTYISTGQAVS*WWESRKLHVCP Trigger: TGGGCATACGTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGCTTGTCCTGTTGAAATGTATGTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | TGGGGGAAAGGCATCAGGCCACACCACACCATGCATTaGATTTGTGGTGGCTTGATGTATATAGCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WGKGIRPHHTMH*ICGGLMYIALS Trigger: GGACAAAGCTATATACATCAAGCCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGCAAGACATTACCTCTTaGCGTAGGCCAGCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLQDITS*RRPASS Trigger: GGAGGAGGCTGGCCTACGCAAAGAGGTAATGTCTTG...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGAGAATGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAAAATTCTTCGTTCCTTaGTTCACAGGATCAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVENVTAWGHCLCLRTCPKFFVP*FTGSGK Trigger: TTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTT...TGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACATTCTCCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | AATACGACCTGGTTAATGTTCTTTAACCCCAGCACTTaGGAAACAGAAGCACACAAGTCTGAGCTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NTTWLMFFNPST*ETEAHKSELEA Trigger: GGCCTCCAGCTCAGACTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| 3UTR TCA 72 bp | AGACACTGCAAGTGGCTCCCAGTTCAGAAGTGGTTGTaGGGTGGAATGTGTGTATTTCTGCAAATAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RHCKWLPVQKWL*GGMCVFLQIVL Trigger: CAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCACTTCTGAACTGGGAGCCACTTGCAGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | GGTTCACTAACTCCTCCCACAAATAAATACATCCTCTaGGTTGTCTCTGACCCAAATGACCCGTGCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSLTPPTNKYIL*VVSDPNDPCFR Trigger: CCTAAAGCACGGGTCATTTGGGTCAGAGACAACGCAGAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | TCTGCAAATAGTGCTGGAATCAACAGGAAGACAGCTTaGCGAGACTCAGTTGAGCTTGAAAGTGGAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SANSAGINRKTA*RDSVELESGTV Trigger: GACAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAGCTGTCTTCCTGTTGATTCCAGCACTATTTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | CTGCAAGTGGCTCCCAGTTCAGAAGTGGTTGTGAGGTaGAATGTGTGTATTTCTGCAAATAGTGCTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: LQVAPSSEVVVR*NVCISANSAGI Trigger: GATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCACTTCTGAACTGGGAGCCACTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | GATTCCAAAGCACCTCAGGGGTTAATAACGCTGCCCTaGGAATACCCTATAAACAGCAAATCCTCATACTGC | + |
|
Preference number: 3 (lower is better) Translates to: DSKAPQGLITLP*EYPINSKSSYC Trigger: GCAGTATGAGGATTTGCTGTTTATAGGGTATTCTCAGGGCAGCGTTATTAACCCCTGAGGTGCTTTGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCAATGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TTWLMFSLRAHILAMEPMLTLRK*PTNTTW Trigger: CCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAA...CATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000183388.2 ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR TCA 72 bp | CTGTGGGAGGAGCTTCAATGTAGGAAGACAGAACCATaGATACAAAGCACTGGTCACAACTGTCAAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LWEELQCRKTEP*IQSTGHNCQIG Trigger: TCCTATTTGACAGTTGTGACCAGTGCTTTGTATTCATGGTTCTGTCTTCCTACATTGAAGCTCCTCCCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CCA 72 bp | GTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTCTTTAACCCCAGCACTTGGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VLTLRKLPTNTT*LMFFNPSTWET Trigger: TGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAAGTTCCTCCTCCAAGACTGGTGCCTGTGACCCTCTTATAATTATCTTTTTGACTCTCAGGAAATaGCCGACAAATACGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KESSSSKTGACDPLIIIFLTLRK*PTNTTW Trigger: CCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAA...AAAGATAATTATAAGAGGGTCACAGGCACCAGTCTTGGAGGAGGAACTTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR TCA 72 bp | CCCAGATGGAGAAACTTTCTAATAAAAGTGCAGTTTTaGGGATCTCTCAGAAGCAAAGCAGGGATTAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRWRNFLIKVQF*GSLRSKAGISR Trigger: CCTGCTAATCCCTGCTTTGCTTCTGAGAGATCCTCAAAACTGCACTTTTATTAGAAAGTTTCTCCATCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR GCA 72 bp | CTCCATAAATGTCTCGAACTAATTTGTCCACTTTGGTaGTATCTCCACGAGATGCCATCTCAAGAGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHKCLELICPLW*YLHEMPSQELL Trigger: AAGAAGCTCTTGAGATGGCATCTCGTGGAGATAGCACCAAAGTGGACAAATTAGTTCGAGACATTTATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184105.9 |
||
| 3UTR CCA 72 bp | GTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTTTCATTAAGGGCACACATTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLTLRKLPTNTT*LMFSLRAHILA Trigger: AGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000183388.2 ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTGTGAGGTGGAATGTGTGTATTTCTGCAAATAGTGCTGGAATCAACAGGAATAAAAGTGCAGTTTaGAGGATCTCTCAGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VVVRWNVCISANSAGINRNKSAV*RISQKQ Trigger: TTGCTTCTGAGAGATCCTCAAAACTGCACTTTTATT...CCTGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 72 bp | CCAGGCTGTGGTGGAGAATGTGACGGCTTGGGGCCATaGCCTCTGTCTGAGGACATGTCCAGGAAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGCGGECDGLGP*PLSEDMSRKVE Trigger: CTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACATTCTCCACCACAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCCACGTATGCCCAAGTGGGTGATGCTGGGATTCCAAAGCACCTCAGGGGTCAAGATCCTCCTTACTaGCCGCCTCTCTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTYAQVGDAGIPKHLRGQDPPY*PPLSSP Trigger: AGGAGAAGAGAGAGGCGGCCAGTAAGGAGGATCTTG...ACCCCTGAGGTGCTTTGGAATCCCAGCATCACCCACTTGGGCATACGTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCCCAGCCAGAGCTCGAGGTCTCCATTCCAGCTCCAAGGCTGCTGTGAAATCCGTAAGCCACATTaGAGGTCAGGTACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILPSQSSRSPFQLQGCCEIRKPH*RSGTSG Trigger: TCCGGAAGTACCTGACCTCCAATGTGGCTTACGGAT...TTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCTGGGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR GCA 90 bp | TGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAGGAAGGTGGAGGATGGTGATCAAAGTTaGTCTGGCAAGATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CDGLGPLPLSEDMSRKVEDGDQS*SGKILL Trigger: AAGGAGGATCTTGCCAGAGCAACTTTGATCACCATC...CTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTCTGTGATCCTGAGGCTTGTTCGTCTAACACTGTGGGAGGAGCTTCAAAGCCACAGCCCAGCCTaGCAAGCCAAACCTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LGSVILRLVRLTLWEELQSHSPA*QAKPLI Trigger: TATGAGAGGTTTGGCTTGCCAGGCTGGGCTGTGGCT...TTGAAGCTCCTCCCACAGTGTTAGACGAACAAGCCTCAGGATCACAGAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR TCA 90 bp | GGACAAGCAGTCAGCTGCTGGTGGGAGTCCAGAAAGCTCCACGTATGCCCAAGTGACAGTGTGGAGACTTaGGAAGTTTTTATCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAVSCWWESRKLHVCPSDSVET*EVFISA Trigger: GGCAGAGATAAAAACTTCTCAAGTCTCCACACTGTC...ACTTGGGCATACGTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGCTTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGTGCTCCATCCGTAAGCCACATTaGAGGTCAGGTACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCVGQPPPILVQATLCSIRKPH*RSGTSG Trigger: TCCGGAAGTACCTGACCTCCAATGTGGCTTACGGAT...GGAGCACAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 72 bp | TCAACAGGAAGACAGCTTGGCGAGACTCAGTTGAGCTaGAAAGTGGAACTGTCAGAGTGTAGACAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STGRQLGETQLS*KVELSECRQQP Trigger: TGGCTGCTGTCTACACTCTGACAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAGCTGTCTTCCTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGAACAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCATCTCTTAACATTATCTCTGCCCATCTaGATAAAAGCAGGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVNRPTLAFSYNAGHLLTLSLPI*IKAGMS Trigger: TGACATGCCTGCTTTTATTCAGATGGGCAGAGATAA...TGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCCTTCACTGCCGATTATTATTATTTTCTTGTGCTCTGGGGTTCACTAGGTGCACGTCCCGAATaGCTGTGGATCCGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCSFTADYYYFLVLWGSLGARPE*LWIRKP Trigger: TGGCTTACGGATCCACAGGCATTCGGGACGTGCACC...TAGTGAACCCCAGAGCACAAGAAAATAATAATAATCGGCAGTGAAGGAGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACACAAGTCTAGCCACAGCCCAGCCTaGCAAGCCAAACCTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TWLMFFNPSTWETEAHKSSHSPA*QAKPLI Trigger: TATGAGAGGTTTGGCTTGCCAGGCTGGGCTGTGGCT...AGACTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| 3UTR CAA 72 bp | CTGGAATCAACAGGAAGACAGCTTGGCGAGACTCAGTaGAGCTTGAAAGTGGAACTGTCAGAGTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LESTGRQLGETQ*SLKVELSECRQ Trigger: CTGTCTACACTCTGACAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAGCTGTCTTCCTGTTGATTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | GCACACAAGTCTGAGCTGGAGGCCAGTCTAGTATACAAAGGAAGTTCCAGGATACTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AHKSELEASLVYKGSSRILLKFV*STSSGT Trigger: TGTGCCACTGGAGGTGGATCATACAAATTTGAGCAG...TATCCTGGAACTTCCTTTGTATACTAGACTGGCCTCCAGCTCAGACTTGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTGAGGTGGAATGTGTGTATTTCTGCAAATAGTGCTGGAATCAACAGGCATGTTTCCAAAACTTaGAGCCACAGCCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVRWNVCISANSAGINRHVSKT*SHSPAW Trigger: CCAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATG...CCTGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR TCA 90 bp | GCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTCCATGTTTCCAAAACTTaGAGCCACAGCCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIVLTLRKLPTNTTWLMFHVSKT*SHSPAW Trigger: CCAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATG...GAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR GCA 90 bp | AATATCCCTCGTGCTCGGAAAACAGTGCTTTCAGCTGCCCCTTGGACCAGTAATTCAGGTACTTCCGGATaGTTTTCAGACTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NIPRARKTVLSAAPWTSNSGTSG*FSDSPL Trigger: AAGTGGAGAGTCTGAAAAGCATCCGGAAGTACCTGA...ATTACTGGTCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCACGAGGGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGCAGGTTTCAGGAAGTCCTCTCGGTAAGTCAGGGTATCTTCAACAGCTCGCAAAATAAACCAGCTTaGCCAAGGTTCCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRFQEVLSVSQGIFNSSQNKPA*PRFLQY Trigger: ATATTGGAGGAACCTTGGTCAAGCTGGTTTATTTTG...CGAGCTGTTGAAGATACCCTGACTTACCGAGAGGACTTCCTGAAACCTGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | ACATTACCTCTTTGCGTAGGCCAGCCTCCTCCCATCTTAGTTCAAGCTACTTTGACTGTGACCGTCCATTaGATCCAACTGAGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPLCVGQPPPILVQATLTVTVH*IQLSQC Trigger: ACATTGACTCAGTTGGATTCAATGGACGGTCACAGT...CAAAGTAGCTTGAACTAAGATGGGAGGAGGCTGGCCTACGCAAAGAGGTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGCTGTTTCAAAGACACGCTGTAGCTCAGATCATGACCTCACCAGTGTTCAAGACTGGTGCCTGTaGCCCTCTTATAATTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPAVSKTRCSSDHDLTSVQDWCL*PSYNYL Trigger: AAGATAATTATAAGAGGGTCACAGGCACCAGTCTTG...AACACTGGTGAGGTCATGATCTGAGCTACAGCGTGTCTTTGAAACAGCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR TCA 90 bp | AATATCCCTCGTGCTCGGAAAACAGTGCTTTCAGCTGCCCCTTGGACCAGTAATTCCTCCTCCAAGATGTaGGAAAATCCTGCTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NIPRARKTVLSAAPWTSNSSSKM*ENPAQI Trigger: AATTTGAGCAGGATTTTCTCACATCTTGGAGGAGGA...ATTACTGGTCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCACGAGGGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTTTCATTAGGTGCACGTCCCGAATaGCTGTGGATCCGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTLRKLPTNTTWLMFSLGARPE*LWIRKP Trigger: TGGCTTACGGATCCACAGGCATTCGGGACGTGCACC...TAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACAATGCAGGCCATCTCTTAACATCAGATGCAGAACAATCCTGCCAAGTTAGTGCAGATTGCCTTTaGGTCCACACAGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYNAGHLLTSDAEQSCQVSADCL*VHTESG Trigger: ACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACT...AACTTGGCAGGATTGTTCTGCATCTGATGTTAAGAGATGGCCTGCATTGTAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR GCA 90 bp | GTTAATAACGCTGCCCTGAGAATACCCTATAAACAGCAAATCCTCATACTGCCTGTGCTCGGAAAACAGTaGTTTCAGCTGCCCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNNAALRIPYKQQILILPVLGKQ*FQLPLG Trigger: TCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCAC...AGGCAGTATGAGGATTTGCTGTTTATAGGGTATTCTCAGGGCAGCGTTATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR GCA 90 bp | ATGCTGAGCCTCAGGTTTCATAGACGTGTTTGTACACTAAGAATTCTGCAGCAGCAACAGCTCGAGGAGTaGTCCAACGGCTCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: MLSLRFHRRVCTLRILQQQQLEE*SNGSKI Trigger: TATTTTGGAGCCGTTGGAGCACTCCTCGAGCTGTTG...CTGCTGCAGAATTCTTAGTGTACAAACACGTCTATGAAACCTGAGGCTCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGCAAGATCCTCCTTACTaGCCGCCTCTCTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IAIVLTLRKLPTNTTWLMQDPPY*PPLSSP Trigger: AGGAGAAGAGAGAGGCGGCCAGTAAGGAGGATCTTG...CATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATGCCCGACAAATACGACCTaGTTAATGTTTTCATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAHPCLQLQCRPSLNIRCPTNTT*LMFSLR Trigger: CCTTAATGAAAACATTAACCAGGTCGTATTTGTCGG...GCATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| 3UTR CAA 72 bp | AGGCCACACCACACCATGCATTGCATTTGTGGTGGCTaGATGTATATAGCTTTGTCCTTTGACAGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPHHTMHCICGG*MYIALSFDSLP Trigger: TGGCAGACTGTCAAAGGACAAAGCTATATACATCAAGCCACCACAAATGCAATGCATGGTGTGGTGTGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGCTGTTTCAAAGACACGCTGTAGCTCAGATCATGACCTCACCAGTGTTCAAAATAAACCAGCTTaGCCAAGGTTCCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TPAVSKTRCSSDHDLTSVQNKPA*PRFLQY Trigger: ATATTGGAGGAACCTTGGTCAAGCTGGTTTATTTTG...AACACTGGTGAGGTCATGATCTGAGCTACAGCGTGTCTTTGAAACAGCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR GCA 90 bp | ACGACCTGGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACACAAGGATGGTGATCAAAGTTaGTCTGGCAAGATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTWLMFFNPSTWETEAHKDGDQS*SGKILL Trigger: AAGGAGGATCTTGCCAGAGCAACTTTGATCACCATC...CTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTCTTGTGCTCTGGGGTTCACTAACTCCTCCCACAAATAAATACATCCTCCTTTCAGCTGCCCCTTaGACCAGTAATCCAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFLVLWGSLTPPTNKYILLSAAP*TSNPAH Trigger: ATGCGCTGGATTACTGGTCCAAGGGGCAGCTGAAAG...GAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| 3UTR CAA 72 bp | CAGTTAGCTCAGCACGTATCCAAATTCTTCGTTCCTTaGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLAQHVSKFFVP*FTGSGKATPAV Trigger: AACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATACGTGCTGAGCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | AGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTCTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SNRVDSQEIADKYDLVNVLLKFV*STSSGT Trigger: TGTGCCACTGGAGGTGGATCATACAAATTTGAGCAG...AACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183349.2 ENSMUST00000183388.2 |
||
| CDS-3UTR GCA 90 bp | TACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCAATAGTGCAGATTGCCTTTaGGTCCACACAGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YDLVNVFIKGTHSCYGANSADCL*VHTESG Trigger: ACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACT...ATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
||
| CDS-3UTR GCA 90 bp | TTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACACAAGTCTGAGCTGATTTGTCCACTTTGGTaGTATCTCCACGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMFFNPSTWETEAHKSELICPLW*YLHEMP Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGACAAAT...CAGCTCAGACTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR GCA 90 bp | GCACGTATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCATGTTTCCAAAACTTTaGGTCCACACAGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARIQILRSFVHRIRKSYPMFPKL*VHTESG Trigger: ACCTGACTCTGTGTGGACGCAAAGTTTTGGAAACAT...GGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATACGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATGCAGAACAATCCTGCCACTAATTTGTCCACTTTaGTGCTATCTCCACGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQLQCRPSLNIRCRTILPLICPL*CYLHEM Trigger: CATCTCGTGGAGATAGCACCAAAGTGGACAAATTAG...TGGCAGGATTGTTCTGCATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | ACGACCTGGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACACAAGCTAATTTGTCCACTTTaGTGCTATCTCCACGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTWLMFFNPSTWETEAHKLICPL*CYLHEM Trigger: CATCTCGTGGAGATAGCACCAAAGTGGACAAATTAG...CTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCCTTCACTGCCGATTATTATTATTTTCTTGTGCTCTGGGGTTCACTATCAGGTACTTCCGGATaGTTTTCAGACTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TCSFTADYYYFLVLWGSLSGTSG*FSDSPL Trigger: AAGTGGAGAGTCTGAAAAGCATCCGGAAGTACCTGA...TAGTGAACCCCAGAGCACAAGAAAATAATAATAATCGGCAGTGAAGGAGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTTCAGGTACTTCCGGATaGTTTTCAGACTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNRVDSQEIADKYDLVNVSGTSG*FSDSPL Trigger: AAGTGGAGAGTCTGAAAAGCATCCGGAAGTACCTGA...AACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS-3UTR GCA 90 bp | TTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGTTTCAAAGACAAAGGGCACACATTCTTaGTATGGAGCCAATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FVPLFTGSGKATPAVSKTKGTHS*YGANVV Trigger: AACAACATTGGCTCCATAGCAAGAATGTGTGCCCTT...TGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGATCCGTAAGCCACATTaGAGGTCAGGTACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNTTWLMFSLRAHILAMEIRKPH*RSGTSG Trigger: TCCGGAAGTACCTGACCTCCAATGTGGCTTACGGAT...CTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 72 bp | ATGCATTGCATTTGTGGTGGCTTGATGTATATAGCTTaGTCCTTTGACAGTCTGCCACATTCCCAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: MHCICGGLMYIA*SFDSLPHSQNL Trigger: CAAGTTCTGGGAATGTGGCAGACTGTCAAAGGACAAAGCTATATACATCAAGCCACCACAAATGCAATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184932.9 |
||
| 3UTR CAA 72 bp | AGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSRIAIVLTLRK*PTNTTWLMFFN Trigger: GTTAAAGAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAAGGCCAGCCTCAGCTATACAGTATTAATGTCGAGTTTGAGGTTAGCCGAAGGTCACCTATTGTaGGAAAATCCTGCTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSKASLSYTVLMSSLRLAEGHLL*ENPAQI Trigger: AATTTGAGCAGGATTTTCTCACAATAGGTGACCTTC...GGCTAACCTCAAACTCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR GCA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGAAGGGCACACATTCTTaGTATGGAGCCAATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IAIVLTLRKLPTNTTWLMKGTHS*YGANVV Trigger: AACAACATTGGCTCCATAGCAAGAATGTGTGCCCTT...CATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTCTTGTGCTCTGGGGTTCACTAACTCCTCCCACAAATAAATACATCCTCAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLVLWGSLTPPTNKYILKAGMS*VGKRIK Trigger: CTTTATACGCTTTCCCACCCATGACATGCCTGCTTT...GAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| 3UTR CAA 72 bp | AGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RSRIAIVLTLRK*PTNTTWLMFSL Trigger: TAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAAATTGCCGACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTTATCTCTGCCCATCTaGATAAAAGCAGGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEIADKYDLVNVFIKGTHLSLPI*IKAGMS Trigger: TGACATGCCTGCTTTTATTCAGATGGGCAGAGATAA...ATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATGAAATGCTGAGCCTCAGGTTTCATAGACGTGTTTGTACACTAAGAATTCTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VYEMLSLRFHRRVCTLRILLKFV*STSSGT Trigger: TGTGCCACTGGAGGTGGATCATACAAATTTGAGCAG...AATTCTTAGTGTACAAACACGTCTATGAAACCTGAGGCTCAGCATTTCATAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR CCA 90 bp | GTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTTTCATTAAGAAAGCAGGCATGTCATaGGTGGGAAAGCGTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDSQEIADKYDLVNVFIKKAGMS*VGKRIK Trigger: CTTTATACGCTTTCCCACCCATGACATGCCTGCTTT...CTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
||
| CDS-3UTR TCA 90 bp | AAATTGCCGACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGACAGTGTGGAGACTTaGGAAGTTTTTATCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLPTNTTWLMFSLRAHILDSVET*EVFISA Trigger: GGCAGAGATAAAAACTTCTCAAGTCTCCACACTGTC...AAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTTGTGCTCTGGGGTTCACTAACTCCTCCCACAAATAAATACATCCTCAAAATAATAGCACTGTaGCCGTCCATTGAATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YFLVLWGSLTPPTNKYILKIIAL*PSIESN Trigger: GTTGGATTCAATGGACGGTCACAGTGCTATTATTTT...GAGGATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR GCA 90 bp | GTTTATGAAATGCTGAGCCTCAGGTTTCATAGACGTGTTTGTACACTAAGAATTATTTGTCCACTTTGGTaGTATCTCCACGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYEMLSLRFHRRVCTLRIICPLW*YLHEMP Trigger: TGGCATCTCGTGGAGATAGCACCAAAGTGGACAAAT...AATTCTTAGTGTACAAACACGTCTATGAAACCTGAGGCTCAGCATTTCATAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCAAAATAAACCAGCTTaGCCAAGGTTCCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TNTTWLMFSLRAHILAMEQNKPA*PRFLQY Trigger: ATATTGGAGGAACCTTGGTCAAGCTGGTTTATTTTG...CTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS CCA 90 bp | GCCGCCTCTTCCGGAGGCCTTCGGCGCGCGGGCGGCCGGCCGAGGTaGAGCCGCCTAGAGAGCCGGGCCGCTCCCGTCTCACACTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AASSGGLRRAGGRPR*SRLESRAAPVSHSP Trigger: CGGAGAGTGTGAGACGGGAGCGGCCCGGCTCTCTAGGCGGCTCCACCTCGGCCGGCCGCCCGCGCGCCGAAGGCCTCCGGAAGAGGCGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000150843.9 ENSMUST00000184105.9 ENSMUST00000184932.9 |
||
| CDS CCA 90 bp | TCCGCAGACTCGCCGACCGCGGCTGAGGTGGCGGCAGCCCTGCCCTaGCGCTCCATAGGCGCGCCAAACCGGCCCGCTCCCATCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SADSPTAAEVAAALP*RSIGAPNRPAPIRN Trigger: GTTGCGGATGGGAGCGGGCCGGTTTGGCGCGCCTATGGAGCGCCAGGGCAGGGCTGCCGCCACCTCAGCCGCGGTCGGCGAGTCTGCGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150843.9 ENSMUST00000184105.9 |
||
| CDS GCA 90 bp | GTCCACACAGAGTCAGGTCCTTCAGCTCAAGGTGCACGTCCCGAATaGCTGTGGATCCGTAAGCCACATTGGAGGTCAGGTACTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHTESGPSAQGARPE*LWIRKPHWRSGTSG Trigger: TCCGGAAGTACCTGACCTCCAATGTGGCTTACGGATCCACAGGCATTCGGGACGTGCACCTTGAGCTGAAGGACCTGACTCTGTGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000145904.2 ENSMUST00000150843.9 ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| CDS-3UTR CAA 90 bp | CTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGTGGTGGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LMGERHQATPHHALHLWWLTLRK*PTNTTW Trigger: CCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAA...CCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | TGTGACGGCTTGGGGCCATTGCCTCTGTCTGAGGACATGTCCAGGAAGGTGGAGACTAATTTGTCCACTTaGGTGCTATCTCCACGAGAT | + |
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Preference number: 5 (lower is better) Translates to: CDGLGPLPLSEDMSRKVETNLST*VLSPRD Trigger: ATCTCGTGGAGATAGCACCAAAGTGGACAAATTAGT...CTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | TCTCCATTCCAGCTCCAAGGCTGCTGTGAACAGGCCCACCCTTGCCTTCAGCTAAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SPFQLQGCCEQAHPCLQLKSCSN*YDPPPV Trigger: CACTGGAGGTGGATCATACAAATTTGAGCAGGATTT...TAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | GGATCTCTCAGAAGCAAAGCAGGGATTAGCAGGAGGGAAAACTACCATCCCTGCCACTGTGACCGTCCATaGAATCCAACTGAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: GSLRSKAGISRRENYHPCHCDRP*NPTESM Trigger: CATTGACTCAGTTGGATTCAATGGACGGTCACAGTG...GCAGGGATGGTAGTTTTCCCTCCTGCTAATCCCTGCTTTGCTTCTGAGAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | AACAGGCCCACCCTTGCCTTCAGCTACAATGCAGGCCATCTCTTAACATCAGATTCATGTTTCCAAAACTaGAAGCCACAGCCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: NRPTLAFSYNAGHLLTSDSCFQN*KPQPSL Trigger: CAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGA...ATCTGATGTTAAGAGATGGCCTGCATTGTAGCTGAAGGCAAGGGTGGGCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | CTGATGGGGGAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGTGGTGGATGTCTCGAACTAATTaGTCCACTTTGGTGCTATCT | + |
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Preference number: 5 (lower is better) Translates to: LMGERHQATPHHALHLWWMSRTN*STLVLS Trigger: AGATAGCACCAAAGTGGACAAATTAGTTCGAGACAT...CCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | GAAAGGCATCAGGCCACACCACACCATGCATTGCATTTGTGGTGGCTTGATGTAAGACAGTGTGGAGACTaGAGAAGTTTTTATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ERHQATPHHALHLWWLDVRQCGD*RSFYLC Trigger: GCAGAGATAAAAACTTCTCAAGTCTCCACACTGTCT...TACATCAAGCCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | ACAAATACGACCTGGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCATCATGTTTCCAAAACTaGAAGCCACAGCCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TNTTWLMFFNPSTWETEASCFQN*KPQPSL Trigger: CAGGCTGGGCTGTGGCTTCAAGTTTTGGAAACATGA...TGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS-3UTR CAA 90 bp | ACGACCTGGTTAATGTTCTTTAACCCCAGCACTTGGGAAACAGAAGCACACAAGAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TTWLMFFNPSTWETEAHKKSCSN*YDPPPV Trigger: CACTGGAGGTGGATCATACAAATTTGAGCAGGATTT...CTTGTGTGCTTCTGTTTCCCAAGTGCTGGGGTTAAAGAACATTAACCAGGTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS-3UTR CAA 90 bp | TATCCAAATTCTTCGTTCCTTTGTTCACAGGATCAGGAAAAGCTACCCCTGCTGGCCTCTCTCTTCTCCTaGCTCATCATGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: YPNSSFLCSQDQEKLPLLASLFS*LIMFPK Trigger: TTTTGGAAACATGATGAGCAAGGAGAAGAGAGAGGC...CAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAAAGGAACGAAGAATTTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS-3UTR CAA 90 bp | GCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTCACTAATTTGTCCACTTaGGTGCTATCTCCACGAGAT | + |
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Preference number: 5 (lower is better) Translates to: AIVLTLRKLPTNTTWLMFTNLST*VLSPRD Trigger: ATCTCGTGGAGATAGCACCAAAGTGGACAAATTAGT...GAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS-3UTR CAA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGGCCTCTCTCTTCTCCTaGCTCATCATGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: IAIVLTLRKLPTNTTWLMASLFS*LIMFPK Trigger: TTTTGGAAACATGATGAGCAAGGAGAAGAGAGAGGC...CATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183349.2 ENSMUST00000183388.2 |
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| CDS-3UTR CAA 90 bp | GCCGACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATCATGTTTCCAAAACTTaGCGTCCACACAGAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ADKYDLVNVFIKGTHSCYHVSKT*RPHRVR Trigger: CCTGACTCTGTGTGGACGCAAAGTTTTGGAAACATG...ATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184932.9 |
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| CDS-3UTR CAA 90 bp | GCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTGGTTAATGTTCATGTCTCGAACTAATTaGTCCACTTTGGTGCTATCT | + |
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Preference number: 5 (lower is better) Translates to: AIVLTLRKLPTNTTWLMFMSRTN*STLVLS Trigger: AGATAGCACCAAAGTGGACAAATTAGTTCGAGACAT...GAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS-3UTR CAA 90 bp | GACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGCCAATGTTAGACAGTGTGGAGACTaGAGAAGTTTTTATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: DLVNVFIKGTHSCYGANVRQCGD*RSFYLC Trigger: GCAGAGATAAAAACTTCTCAAGTCTCCACACTGTCT...AACATTGGCTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
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| CDS-3UTR CAA 90 bp | ACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTGCTATGGAGGCCTCTCTCTTCTCCTaGCTCATCATGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: TNTTWLMFSLRAHILAMEASLFS*LIMFPK Trigger: TTTTGGAAACATGATGAGCAAGGAGAAGAGAGAGGC...CTCCATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
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| CDS CCA 90 bp | ATAGCAATCGTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTTGTGAGAAAATCCTGCTCAAATTTGTATGATCCA | + |
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Preference number: 5 (lower is better) Translates to: IAIVLTLRKLPTNTT*LMFVRKSCSNLYDP Trigger: TGGATCATACAAATTTGAGCAGGATTTTCTCACAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS-3UTR CAA 90 bp | AAATTGCCGACAAATACGACCTGGTTAATGTTTTCATTAAGGGCACACATTCTTAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: KLPTNTTWLMFSLRAHILKSCSN*YDPPPV Trigger: CACTGGAGGTGGATCATACAAATTTGAGCAGGATTT...AAGAATGTGTGCCCTTAATGAAAACATTAACCAGGTCGTATTTGTCGGCAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183388.2 |
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| CDS CCA 72 bp | TCCGGAGGCCTTCGGCGCGCGGGCGGCCGGCCGAGGTaGAGCCGCCTAGAGAGCCGGGCCGCTCCCGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGGLRRAGGRPR*SRLESRAAPVS Trigger: TGAGACGGGAGCGGCCCGGCTCTCTAGGCGGCTCCACCTCGGCCGGCCGCCCGCGCGCCGAAGGCCTCCGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000150843.9 ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| CDS GCA 72 bp | GAGTCAGGTCCTTCAGCTCAAGGTGCACGTCCCGAATaGCTGTGGATCCGTAAGCCACATTGGAGGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ESGPSAQGARPE*LWIRKPHWRSG Trigger: ACCTGACCTCCAATGTGGCTTACGGATCCACAGGCATTCGGGACGTGCACCTTGAGCTGAAGGACCTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000145904.2 ENSMUST00000150843.9 ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| CDS CCA 72 bp | CTTGACCAAGGTTCCTCCAATATCCAAGCCAAACCATaGAAAAAGCGGCCGCCTCTTCCGGAGGCCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LDQGSSNIQAKP*KKRPPLPEAFG Trigger: GCCGAAGGCCTCCGGAAGAGGCGGCCGCTTTTTCCATGGTTTGGCTTGGATATTGGAGGAACCTTGGTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000150843.9 ENSMUST00000184105.9 ENSMUST00000184932.9 |
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| CDS CAA 90 bp | GCATACGCCAGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTTGTGAGAAAATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AYARSRIAIVLTLRK*PTNTTWLMFVRKSC Trigger: GCAGGATTTTCTCACAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCTGGCGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS TCA 72 bp | CCTCCAAGATGTGAGAAAATCCTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACAAAAGACAGTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PPRCEKILLKFV*STSSGTKDSVE Trigger: CTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACATCTTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS TCA 72 bp | GTCACCTATTGTGAGAAAATCCTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACAAAAGACAGTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VTYCEKILLKFV*STSSGTKDSVE Trigger: CTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACAATAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150843.9 |
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| CDS CAA 72 bp | AGAAGCCGCATAGCAATCGTGTTGACTCTCAGGAAATaGCCGACAAATACGACCTGGTTAATGTTTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RSRIAIVLTLRK*PTNTTWLMFVR Trigger: TCTCACAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS CAA 90 bp | CAAAGAAAGTTCCTCCTCCAAGATGTGAGAAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTGGCACAAAAGACAGTGTGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: QRKFLLQDVRKSCSN*YDPPPVAQKTVWRL Trigger: AAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACATCTTGGAGGAGGAACTTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS GCA 72 bp | CAAAGAAAGTTCCTCCTCCAAGATGTGAGAAAATCCTaGTCAAATTTGTATGATCCACCTCCAGTGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: QRKFLLQDVRKS*SNLYDPPPVAQ Trigger: TTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACATCTTGGAGGAGGAACTTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183349.2 |
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| CDS TCA 72 bp | GTTAATGTTTGTGAGAAAATCCTGCTCAAATTTGTATaGTCCACCTCCAGTGGCACAAAAGACAGTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VNVCEKILLKFV*STSSGTKDSVE Trigger: CTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACAAACATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS CAA 72 bp | ACCTGGTTAATGTTTGTGAGAAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTGGCACAAAAGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: TWLMFVRKSCSN*YDPPPVAQKTV Trigger: CACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACAAACATTAACCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS CAA 90 bp | ACAAATACGACCTGGTTAATGTTTGTGAGAAAATCCTGCTCAAATTaGTATGATCCACCTCCAGTGGCACAAAAGACAGTGTGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: TNTTWLMFVRKSCSN*YDPPPVAQKTVWRL Trigger: AAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACAAACATTAACCAGGTCGTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS GCA 72 bp | ACAAATACGACCTGGTTAATGTTTGTGAGAAAATCCTaGTCAAATTTGTATGATCCACCTCCAGTGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: TNTTWLMFVRKS*SNLYDPPPVAQ Trigger: TTGTGCCACTGGAGGTGGATCATACAAATTTGAGCAGGATTTTCTCACAAACATTAACCAGGTCGTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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| CDS CCA 72 bp | GTGTTGACTCTCAGGAAATTGCCGACAAATACGACCTaGTTAATGTTTGTGAGAAAATCCTGCTCAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: VLTLRKLPTNTT*LMFVRKSCSNL Trigger: CAAATTTGAGCAGGATTTTCTCACAAACATTAACCAGGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145904.2 |
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