Pregenerated sensors for PAMR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027188Ensembl transcript IDs: ENSMUST00000028612.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGCCCAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTaGCAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: CSPGLPKSTFSTQTD*QSHHSEWSRSKRFS Trigger: GGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTGGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR CCA 90 bp | CTTGTGACAATTTACACAGGGTGCCACACCCAATCTCCTTTGCCCTaGGCTAGTCTAAGTTGTTTGTTCTTTGGAACTTTGACAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVTIYTGCHTQSPLP*ASLSCLFFGTLTEA Trigger: GGCTTCTGTCAAAGTTCCAAAGAACAAACAACTTAGACTAGCCCAGGGCAAAGGAGATTGGGTGTGGCACCCTGTGTAAATTGTCACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR TCA 90 bp | AAATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTaGCAATTTACACAGGGTGCCACACCCAATCTCCTTTGCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KCVQKIGKGKDQTIL*QFTQGATPNLLCPG Trigger: CCCAGGGCAAAGGAGATTGGGTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGGCATCTTTTAGATaGTTCCCAAGCAGTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QASPNQPSQPKLIDSHITLASFR*FPSSQG Trigger: TCCCTGACTGCTTGGGAATCATCTAAAAGATGCCAG...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACTCCTTCTAGTCACATaGTCTTCTTTGAAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: PSQPKLIDSHITLSGAGALLLVT*SSLKKS Trigger: GGATTTCTTCAAAGAAGACCATGTGACTAGAAGGAG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR CAA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTaGAAGAAATCCAGTTGTTGCAAGACCTGGCATCTTTTAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: VEQEQEVLLLVTWSS*KKSSCCKTWHLLDD Trigger: ATCATCTAAAAGATGCCAGGTCTTGCAACAACTGGATTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATACAGTCACATCACTCTaGGTGGAGCAGGAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDTVTSL*VEQEQE Trigger: CTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGT...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR CCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAAGTTGTTGCAAGACCTaGCATCTTTTAGATGATTCC | + |
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Preference number: 2 (lower is better) Translates to: NQPSQPKLIDSHITLSGASCCKT*HLLDDS Trigger: GGAATCATCTAAAAGATGCCAGGTCTTGCAACAACT...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATAAGAAATCCAGTTGTTaGAAGACCTGGCATCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDKKSSC*KTWHLL Trigger: TAAAAGATGCCAGGTCTTGCAACAACTGGATTTCTT...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR TCA 72 bp | GGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTaGCAGTCACATCACTCTGAGTGGAGCAGGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GLPKSTFSTQTD*QSHHSEWSRSK Trigger: CTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR TCA 72 bp | GAAATCCAGTTGTTGCAAGACCTGGCATCTTTTAGATaGTTCCCAAGCAGTCAGGGAGACAGTTCCCTGATG | + |
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Preference number: 3 (lower is better) Translates to: EIQLLQDLASFR*FPSSQGDSSLM Trigger: CATCAGGGAACTGTCTCCCTGACTGCTTGGGAATCATCTAAAAGATGCCAGGTCTTGCAACAACTGGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR CAA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGTCACATGGTCTTCTTaGAAGAAATCCAGTTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: QPSQPKLIDSHITLSGAGVTWSS*KKSSCC Trigger: GCAACAACTGGATTTCTTCAAAGAAGACCATGTGAC...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCTTGTTCTTTGGAACTTaGACAGAAGCCAGGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCLFFGT*TEARCS Trigger: GCTGCACCTGGCTTCTGTCAAAGTTCCAAAGAACAA...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR TCA 72 bp | CAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTaGCAATTTACACAGGGTGCCACACCCAATCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: QKIGKGKDQTIL*QFTQGATPNLL Trigger: AAGGAGATTGGGTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATTTTGAAGAAATCCAGTaGTTGCAAGACCTGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDFEEIQ*LQDLAS Trigger: AGATGCCAGGTCTTGCAACAACTGGATTTCTTCAAA...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAGGCATGTCCTCCTGCTaGTTCCCAGGCGGCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAGMSSC*FPGGGR Trigger: TCTACCGCCGCCTGGGAAGCAGCAGGAGGACATGCC...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCATCCTCCGTACCAGCCTaGCCTGCACTCTGCGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGASSVPA*PALCAV Trigger: TACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGA...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACCTTCTCACCAGGTCTaGGATCTTCGGTTCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAPSHQV*DLRFPA Trigger: TGCCGGGAACCGAAGATCTCAGACCTGGTGAGAAGG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGACCTGGCCACATCGCATaGAGTCTCCTCCGTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGPGHIA*SLLRTS Trigger: GCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGG...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGGACAAAGCAGCGATaGCCCCTGTCTCTGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGARTKQR*PLSLQC Trigger: GCACTGCAGAGACAGGGGGCATCGCTGCTTTGTCCT...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGATGTCATAGCTCCAGCTaGCCAGCCCCACCAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGCHSSS*PAPPNA Trigger: GGCATTTGGTGGGGCTGGTCAGCTGGAGCTATGACA...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCGTACCAGCCTGCCCTaGACTCTGCGCAGTAGAATC | + |
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Preference number: 4 (lower is better) Translates to: QASPNQPSQPKLIDSHITRTSLP*TLRSRI Trigger: GATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACG...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCATCACCAGGGCACCACTaGAGACCAAGAACCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGASPGHH*RPRTMH Trigger: GTGCATGGTTCTTGGTCTGCAGTGGTGCCCTGGTGA...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTAGGGCTCCTCACATCTaGCAGGATGTTCCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IDSHITLSGAGARGSPSSRAPHI*QDVPAS Trigger: GCTGGCTGGAACATCCTGGCAGATGTGAGGAGCCCT...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCTCAGGCATGTCCTCCTaGTGCTTCCCAGGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCSGMSS*CFPGGG Trigger: ACCGCCGCCTGGGAAGCAGCAGGAGGACATGCCTGA...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAAGCTCAGTCACACAGTaGGCAGCCACAACCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGSSVTQ*AATTTV Trigger: GACTGTGGTTGTGGCTGCCCACTGTGTGACTGAGCT...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCTCTCTTGGCAACGATaGGATGAGAAGGAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IDSHITLSGAGARGSPSSLSWQR*DEKELQ Trigger: CTGCAGCTCCTTCTCATCTCATCGTTGCCAAGAGAG...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTTGAAGAAACAAGATCTGACCCTTTaGGGCTCGAAGAACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VEQEQEVLLLVTWSSLKKQDLTL*GSKNLA Trigger: GGCCAGGTTCTTCGAGCCTCAAAGGGTCAGATCTTG...TTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCAAGAGCCAGTGCTCCTaGTGGGAGCTGGCCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCKSQCS*WELASR Trigger: ACGAGAGGCCAGCTCCCATCAGGAGCACTGGCTCTT...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCGCCATGGCCAGCGGGTaGCTTGGGTCTTTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCAMASG*LGSLEK Trigger: CTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGC...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTTGAAGAAATGGGTGTGCAGATGTTaGTATCCAGGGGGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VEQEQEVLLLVTWSSLKKWVCRC*YPGGRS Trigger: AGACCTGCCCCCTGGATACCAACATCTGCACACCCA...TTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGACCAGCCACAGTGATGTaGGATTCCTGGAAAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGPATVM*DSWKEV Trigger: CACCTCTTTCCAGGAATCCCACATCACTGTGGCTGG...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTTGTCAAGGAGGCATGTaGCATCATGGAAACAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: IDSHITLSGAGARGSPSSCQGGM*HHGNKG Trigger: CCCCTTGTTTCCATGATGGCACATGCCTCCTTGACA...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCACCCGGCAGGCTTTCATaGAGACAGGTTGCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGAPGRLS*RQVAFL Trigger: CAGGAAAGCAACCTGTCTGCATGAAAGCCTGCCGGG...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAGCATCCTGCAATTTCTaGTTGCTGAAAGCCGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAASCNF*LLKAVE Trigger: TTCCACGGCTTTCAGCAAGCAGAAATTGCAGGATGC...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTTGAAGAAAGCAGACCAAGAACCATaGACCTTTGTGCAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: VEQEQEVLLLVTWSSLKKADQEP*TFVQTT Trigger: GGTGGTCTGCACAAAGGTGCATGGTTCTTGGTCTGC...TTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACACTTCCTTCTTTCCTaGGCAGAGGCATTCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAHFLLS*AEAFNL Trigger: CAGATTGAATGCCTCTGCCCAGGAAAGAAGGAAGTG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCGGCCAGCGGGTGCCTTaGGTCTTTGGAGAAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCGQRVP*VFGEGV Trigger: CACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCC...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACATTATCCTCATTCCTaGAGCATGGGATGGTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAHYPHS*SMGWCN Trigger: GTTACACCATCCCATGCTGCAGGAATGAGGATAATG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACATTGCGGCAGCTCTTaGAGTTTTCAAAGATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAHCGSS*SFQRWY Trigger: GTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACGGGCAGGTCTCCAAATaGAAGGGCTGGCTTTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LERERIRQSCDNLHRVPHGQVSK*KGWLFG Trigger: ACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCC...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTGAGATGCACTCATACTaGACTTGGGTGTGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: IDSHITLSGAGARGSPSSEMHSY*TWVCRC Trigger: ACATCTGCACACCCAAGTCCAGTATGAGTGCATCTC...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACTGGTCCTCCGGTAGATaGCTGCCTGCCATGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYWSSGR*LPAMAS Trigger: GCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCA...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CCA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACGTGATGTGGGATTCCTaGAAAGAGGTGCTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LERERIRQSCDNLHRVPHVMWDS*KEVLRS Trigger: GGACCTCAGCACCTCTTTCCAGGAATCCCACATCAC...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACGAAAAGGACATGGAGTaGAGAGCCAGTGCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LERERIRQSCDNLHRVPHEKDME*RASAPD Trigger: ATCAGGAGCACTGGCTCTTCACTCCATGTCCTTTTC...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR TCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCTCCAGCCAGCCACAGTaGTGTGGGATTCCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCSSQPQ*CGIPGK Trigger: CTTTCCAGGAATCCCACATCACTGTGGCTGGCTGGA...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTTTGGGTCTACCACTCTaGCCATTCCATAATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QASPNQPSQPKLIDSHITLGLPL*PFHNVR Trigger: CCTTACATTATGGAATGGTCAGAGTGGTAGACCCAA...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAATACCAAACCTCAACTaGATGATAAACCCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQPKLIDSHITLSGAGAIPNLN*MINPGL Trigger: CAGACCTGGGTTTATCATCCAGTTGAGGTTTGGTAT...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGACACTCTCCATTCTGCTaGCAAGTTCGTTTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGHSPFC*QVRFSL Trigger: CAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTG...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCCATCGTGTACACCACTaGTCCTCCGGTAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCHRVHH*SSGRWL Trigger: CAGCCATCTACCGGAGGACCAGTGGTGTACACGATG...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| 3UTR CAA 72 bp | GTGACAATTTACACAGGGTGCCACACCCAATCTCCTTaGCCCTGGGCTAGTCTAAGTTGTTTGTTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTIYTGCHTQSP*PWASLSCLFFG Trigger: TCCAAAGAACAAACAACTTAGACTAGCCCAGGGCAAAGGAGATTGGGTGTGGCACCCTGTGTAAATTGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCGACAGGTTGCTTTCCTaGCCACTCTCCATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCDRLLS*PLSILL Trigger: CAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTC...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATCGCCCCAGGAGCCATTaGGGCAGCTCTTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDRPRSH*GSSCSF Trigger: AAAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCG...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGACCACTCTCCATTCTaGTGGCAAGTTCGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGADHSPF*WQVRFS Trigger: TGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTC...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTTGAAGAAACCCGTAAATTCTGGATaGTCTTCTCATCCCGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VEQEQEVLLLVTWSSLKKPVNSG*SSHPDH Trigger: ATGATCGGGATGAGAAGAGCATCCAGAATTTACGGG...TTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCCTCATTCCTGCAGCATaGGATGGTGTAACCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCLIPAA*DGVTHH Trigger: GTGGTGGGTTACACCATCCCATGCTGCAGGAATGAG...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACGCTCCTGATGGGAGCTaGCCTCTCGTTGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYAPDGS*PLVATE Trigger: TTCTGTGGCAACGAGAGGCCAGCTCCCATCAGGAGC...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGAATGGAAAAGGACATaGAGTGAAGAGCCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGAEWKRT*SEEPVL Trigger: GAGCACTGGCTCTTCACTCCATGTCCTTTTCCATTC...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | CAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGATTGGAGCCATCAGAATaGAAAAGGACATGGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPSQPKLIDSHITLSGAGLEPSE*KRTWSE Trigger: TTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAA...TCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATGCCAGGCAGATGGGTTaGACACGGGTACTGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDARQMG*TRVLMR Trigger: TCGCATCAGTACCCGTGTCCAACCCATCTGCCTGGC...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCAACATTCTCTACACATaGTGTTCCACTCAGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCNILYT*CSTQLR Trigger: CCGGAGCTGAGTGGAACATCATGTGTAGAGAATGTT...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAATGGTACAACCTGGGTaGATTAGACAGGAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGAMVQPG*IRQESH Trigger: ATGTGACTCCTGTCTAATTCACCCAGGTTGTACCAT...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | AAAATTACACTTCAGGCCCGCATTGTTCTATACAACATATGTACAGACGGATGCGACAACCTTGAGGTCTaGTGTCTTGATGATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KITLQARIVLYNICTDGCDNLEV*CLDDGG Trigger: GCCACCATCATCAAGACAGCAGACCTCAAGGTTGTC...GCATCCGTCTGTACATATGTTGTATAGAACAATGCGGGCCTGAAGTGTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACCCCCTGTCTCTGCAGTaGAGATGTCAGAAGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYPLSLQ*RCQKGY Trigger: GTACCCCTTCTGACATCTGCACTGCAGAGACAGGGG...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACCACTCATACTGGACTTaGGTGTGCAGATGTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LERERIRQSCDNLHRVPHHSYWT*VCRCWY Trigger: ATACCAACATCTGCACACCCAAGTCCAGTATGAGTG...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCATACTGGGATCTTTGCTaGCACAGAACATGTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGAYWDLC*HRTCCQ Trigger: CTGACAACATGTTCTGTGCCAGCAAAGATCCCAGTA...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACATGGAAACAAGGGGATaGGGAGCACGCTGTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYMETRG*GARCDL Trigger: GAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCAT...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAAAGTTCGTTTCTCATTaGCACTCAGAACGTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQPSQPKLIDSHITLSGAKFVSH*HSERMS Trigger: GCTCATACGTTCTGAGTGGCAATGAGAAACGAACTT...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACGGTAGAAGGGCGAGATaGACTCATACTGGACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYGRRAR*THTGLG Trigger: CCCAAGTCCAGTATGAGTGCATCTCGCCCTTCTACC...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTTGCAGTTTTCAAAGATaGTACAACCTGGGTGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: IDSHITLSGAGARGSPSSCSFQR*YNLGEL Trigger: TAATTCACCCAGGTTGTACCATCTTTGAAAACTGCA...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCTTCCTCACAAAGCATTaGGTCTACCACTCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCFLTKH*VYHSDH Trigger: ATGGTCAGAGTGGTAGACCCAATGCTTTGTGAGGAA...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACTACTGGACTTGGGTGTaGAGATGTTGGTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYYWTWV*RCWYPG Trigger: CCCTGGATACCAACATCTGCACACCCAAGTCCAGTA...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACAGGCATGTGCCATCATaGAAACAAGGGGATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYRHVPS*KQGDEE Trigger: CTCCTCATCCCCTTGTTTCCATGATGGCACATGCCT...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCGTGCCAATTTTTACATaGCGCTCATTGAGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDWKGKGSDNLVTIYTGCVPIFT*RSLRSP Trigger: TGGACTTCTCAATGAGCGCCATGTAAAAATTGGCAC...GCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACCAGAGGCATTCAATCTaGTCATATTCACAACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LERERIRQSCDNLHRVPHQRHSI*SYSQHS Trigger: AGAATGTTGTGAATATGATCAGATTGAATGCCTCTG...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACTTGGTAGAGGCATCCTaGAATTTCTGCTTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYLVEAS*NFCLLK Trigger: TTTCAGCAAGCAGAAATTGCAGGATGCCTCTACCAA...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATATGCCATGGTCTTCATaGTGTTCCTCACAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDMPWSS*CSSQSI Trigger: AATGCTTTGTGAGGAACAGCATGAAGACCATGGCAT...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATAGCCATCGAAGTTCTTaGAGCCATCAGAATGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDSHRSS*SHQNGK Trigger: TTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCT...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | TGTCTTGTCATAGCTCCAGCTGACCAGCCCCACCAAATGCCAGCGTaGCTCGGGGGATGCTCGGCCTGGGAAGGACAAAGCAGCGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLVIAPADQPHQMPA*LGGCSAWEGQSSDA Trigger: GGCATCGCTGCTTTGTCCTTCCCAGGCCGAGCATCCCCCGAGCCACGCTGGCATTTGGTGGGGCTGGTCAGCTGGAGCTATGACAAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | CTGCCTGCCATGGCCAGCGGGTGCCTTGGGTCTTTGGAGAAGGAGTaGTCTCGATTTTTCCACAGATTGGGATACAGGACGGGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAMASGCLGSLEKE*SRFFHRLGYRTGPA Trigger: GGCGGGCCCCGTCCTGTATCCCAATCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | GTGCAGACCACCATCGTGTACACCACTGGTCCTCCGGTAGATGGCTaGCTGCCATGGCCAGCGGGTGCCTTGGGTCTTTGGAGAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VQTTIVYTTGPPVDG*LPWPAGALGLWRRS Trigger: ACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGTGGTCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 90 bp | AGGCTGTGGATAGGCCATTGCTACATGTCTTGTCATAGCTCCAGCTaGCCAGCCCCACCAAATGCCAGCGTGGCTCGGGGGATGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLWIGHCYMSCHSSS*PAPPNASVARGMLG Trigger: GCCGAGCATCCCCCGAGCCACGCTGGCATTTGGTGGGGCTGGTCAGCTGGAGCTATGACAAGACATGTAGCAATGGCCTATCCACAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | GGCATGTCCTCCTGCTGCTTCCCAGGCGGCGGTAGAAGGGCGAGATaGACTCATACTGGACTTGGGTGTGCAGATGTTGGTATCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GMSSCCFPGGGRRAR*THTGLGCADVGIQG Trigger: CCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTCGCCCTTCTACCGCCGCCTGGGAAGCAGCAGGAGGACATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | ACCATCGTGTACACCACTGGTCCTCCGGTAGATGGCTGCCTGCCATaGCCAGCGGGTGCCTTGGGTCTTTGGAGAAGGAGTGCTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: TIVYTTGPPVDGCLP*PAGALGLWRRSALD Trigger: ATCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | CTTTGTGCAGACCACCATCGTGTACACCACTGGTCCTCCGGTAGATaGCTGCCTGCCATGGCCAGCGGGTGCCTTGGGTCTTTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCADHHRVHHWSSGR*LPAMASGCLGSLEK Trigger: CTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGTGGTCTGCACAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | GCCACATCGCATGCAGTCTCCTCCGTACCAGCCTGCCCTGCACTCTaGGCAGTAGAATCCCTTCACGTAGAAGTCATCCAGAGTTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATSHAVSSVPACPAL*AVESLHVEVIQSSA Trigger: GGCGGAACTCTGGATGACTTCTACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | CACCACTGGTCCTCCGGTAGATGGCTGCCTGCCATGGCCAGCGGGTaGCTTGGGTCTTTGGAGAAGGAGTGCTCTCGATTTTTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHWSSGRWLPAMASG*LGSLEKECSRFFHR Trigger: TCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | GAACCTGGCCACATCGCATGCAGTCTCCTCCGTACCAGCCTGCCCTaGACTCTGCGCAGTAGAATCCCTTCACGTAGAAGTCATCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGHIACSLLRTSLP*TLRSRIPSRRSHPE Trigger: CTCTGGATGACTTCTACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | CTCGGCCTGGGAAGGACAAAGCAGCGATGCCCCCTGTCTCTGCAGTaGAGATGTCAGAAGGGGTACTGGGATCTTTGCTGGCACAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LGLGRTKQRCPLSLQ*RCQKGYWDLCWHRT Trigger: TGTTCTGTGCCAGCAAAGATCCCAGTACCCCTTCTGACATCTGCACTGCAGAGACAGGGGGCATCGCTGCTTTGTCCTTCCCAGGCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | ACATCTGCCAGGATGTTCCAGCCAGCCACAGTGATGTGGGATTCCTaGAAAGAGGTGCTGAGGTCCCGAGTGGTAGCCAGGCAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSARMFQPATVMWDS*KEVLRSRVVARQMG Trigger: ACCCATCTGCCTGGCTACCACTCGGGACCTCAGCACCTCTTTCCAGGAATCCCACATCACTGTGGCTGGCTGGAACATCCTGGCAGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | TCGAAGAACCTGGCCACATCGCATGCAGTCTCCTCCGTACCAGCCTaGCCTGCACTCTGCGCAGTAGAATCCCTTCACGTAGAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SKNLATSHAVSSVPA*PALCAVESLHVEVI Trigger: GATGACTTCTACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGCCAGGTTCTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 90 bp | CCCAGTGGTGTCAAGGAGGCATGTGCCATCATGGAAACAAGGGGATaGGGAGCACGCTGTGATCTCCTCAAAGACAGCGTGGAAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSGVKEACAIMETRG*GARCDLLKDSVEAI Trigger: GATGGCTTCCACGCTGTCTTTGAGGAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCATGATGGCACATGCCTCCTTGACACCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 90 bp | AGTGGGCAGCCACAACCACAGTCCGTTCATTCACCAGGGCACCACTaGAGACCAAGAACCATGCACCTTTGTGCAGACCACCATCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGQPQPQSVHSPGHH*RPRTMHLCADHHRV Trigger: TACACGATGGTGGTCTGCACAAAGGTGCATGGTTCTTGGTCTGCAGTGGTGCCCTGGTGAATGAACGGACTGTGGTTGTGGCTGCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 90 bp | TGGAAAGAGGTGCTGAGGTCCCGAGTGGTAGCCAGGCAGATGGGTTaGACACGGGTACTGATGCGAGCTTTGTCTAGGAGCTTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: WKEVLRSRVVARQMG*TRVLMRALSRSFRT Trigger: TGTTCTGAAGCTCCTAGACAAAGCTCGCATCAGTACCCGTGTCCAACCCATCTGCCTGGCTACCACTCGGGACCTCAGCACCTCTTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 90 bp | GCCATCGAAGTTCTTGGAGCCATCAGAATGGAAAAGGACATGGAGTaGAGAGCCAGTGCTCCTGATGGGAGCTGGCCTCTCGTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AIEVLGAIRMEKDME*RASAPDGSWPLVAT Trigger: TGTGGCAACGAGAGGCCAGCTCCCATCAGGAGCACTGGCTCTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 90 bp | GGAGGCATGTGCCATCATGGAAACAAGGGGATGAGGAGCACGCTGTaGTCTCCTCAAAGACAGCGTGGAAGCCATCGAAGTTCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGMCHHGNKGMRSTL*SPQRQRGSHRSSWS Trigger: GCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGAGGAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCATGATGGCACATGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | GTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTCACATGGTCTTCTTTGAAGAAACCGCCCCAGGAGCCATaGCGGCAGCTCTTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VEQEQEVLLLVTWSSLKKPPQEP*RQLLQF Trigger: AAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCGG...TTTCTTCAAAGAAGACCATGTGACTAGAAGGAGAACCTCTTGCTCCTGCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 90 bp | GATCTTCGGTTCCCGGCAGGCTTTCATGCAGACAGGTTGCTTTCCTaGCCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCATTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DLRFPAGFHADRLLS*PLSILLASSFLIAT Trigger: AGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGCCTGCCGGGAACCGAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | ATCCCTTCACGTAGAAGTCATCCAGAGTTCCGCCCCAGGAGCCATTaGGGCAGCTCTTGCAGTTTTCAAAGATGGTACAACCTGGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPSRRSHPEFRPRSH*GSSCSFQRWYNLGE Trigger: TTCACCCAGGTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCGGAACTCTGGATGACTTCTACGTGAAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | AGGTCTGAGATCTTCGGTTCCCGGCAGGCTTTCATGCAGACAGGTTaGTTTCCTGACCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSEIFGSRQAFMQTG*FPDHSPFCWQVRFS Trigger: TGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGCCTGCCGGGAACCGAAGATCTCAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | GCACACTTGAAAGACCCAGTGGTGTCAAGGAGGCATGTGCCATCATaGAAACAAGGGGATGAGGAGCACGCTGTGATCTCCTCAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: AHLKDPVVSRRHVPS*KQGDEEHAVISSKT Trigger: TGTCTTTGAGGAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCATGATGGCACATGCCTCCTTGACACCACTGGGTCTTTCAAGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | GTGCAGATGTTGGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGCTaGCTTTTTGGTAGAGGCATCCTGCAATTTCTGCTTGCTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQMLVSRGQVSKWKG*LFGRGILQFLLAES Trigger: GCTTTCAGCAAGCAGAAATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | GACTTGGGTGTGCAGATGTTGGTATCCAGGGGGCAGGTCTCCAAATaGAAGGGCTGGCTTTTTGGTAGAGGCATCCTGCAATTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLGVQMLVSRGQVSK*KGWLFGRGILQFLL Trigger: AAGCAGAAATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | AGAAGTCATCCAGAGTTCCGCCCCAGGAGCCATTGCGGCAGCTCTTaGAGTTTTCAAAGATGGTACAACCTGGGTGAATTAGACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSHPEFRPRSHCGSS*SFQRWYNLGELDRS Trigger: ACTCCTGTCTAATTCACCCAGGTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCGGAACTCTGGATGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | CAGGCTTTCATGCAGACAGGTTGCTTTCCTGACCACTCTCCATTCTaGTGGCAAGTTCGTTTCTCATTGCCACTCAGAACGTATGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QAFMQTGCFPDHSPF*WQVRFSLPLRTYEP Trigger: CGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 90 bp | TCAAAGACAGCGTGGAAGCCATCGAAGTTCTTGGAGCCATCAGAATaGAAAAGGACATGGAGTGAAGAGCCAGTGCTCCTGATGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKTAWKPSKFLEPSE*KRTWSEEPVLLMGA Trigger: AGCTCCCATCAGGAGCACTGGCTCTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CAA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTACAAGATCTGACCCTTaGAGGCTCGAAGAACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IDSHITLSGAGARGSPSSTRSDP*RLEEPG Trigger: GCCAGGTTCTTCGAGCCTCAAAGGGTCAGATCTTGT...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACCTTCTGTGATTTTCTaGTACCCATTGACTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSQPKLIDSHITLSGAGAPSVIF*YPLTGP Trigger: GGGGCCAGTCAATGGGTACAAGAAAATCACAGAAGG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | AATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGGTGCCTTGGGTCTTaGGAGAAGGAGTGCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NQPSQPKLIDSHITLSGAGCLGS*EKECSR Trigger: TCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCC...TGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 90 bp | AACCTGGGTGAATTAGACAGGAGTCACATTCATTATCCTCATTCCTaGAGCATGGGATGGTGTAACCCACCACTTCCTTCTTTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLGELDRSHIHYPHS*SMGWCNPPLPSFLG Trigger: GCCCAGGAAAGAAGGAAGTGGTGGGTTACACCATCCCATGCTGCAGGAATGAGGATAATGAATGTGACTCCTGTCTAATTCACCCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 90 bp | GCTTTCATGCAGACAGGTTGCTTTCCTGACCACTCTCCATTCTGCTaGCAAGTTCGTTTCTCATTGCCACTCAGAACGTATGAGCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFMQTGCFPDHSPFC*QVRFSLPLRTYEPL Trigger: TAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTGCACTCATACTGGACTaGGGTGTGCAGATGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QASPNQPSQPKLIDSHITALILD*GVQMLV Trigger: TACCAACATCTGCACACCCAAGTCCAGTATGAGTGC...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 90 bp | GCTTTCCTGACCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCATTaGCACTCAGAACGTATGAGCCGTTACAAAAGAAAGACACAACCG | + |
|
Preference number: 5 (lower is better) Translates to: AFLTTLHSAGKFVSH*HSERMSRYKRKTQP Trigger: CGGTTGTGTCTTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 90 bp | TTAGACAGGAGTCACATTCATTATCCTCATTCCTGCAGCATGGGATaGTGTAACCCACCACTTCCTTCTTTCCTGGGCAGAGGCATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LDRSHIHYPHSCSMG*CNPPLPSFLGRGIQ Trigger: TTGAATGCCTCTGCCCAGGAAAGAAGGAAGTGGTGGGTTACACCATCCCATGCTGCAGGAATGAGGATAATGAATGTGACTCCTGTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | CCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCACAAGTTCGTTTCTCATaGCCACTCAGAACGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSQPKLIDSHITLSGAGAQVRFS*PLRTYE Trigger: CTCATACGTTCTGAGTGGCAATGAGAAACGAACTTG...TGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACGGAAGGGCTGGCTTTTaGGTAGAGGCATCCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LERERIRQSCDNLHRVPHGRAGF*VEASCN Trigger: ATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCC...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTGTACTGATGCGAGCTTaGTCTAGGAGCTTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: QASPNQPSQPKLIDSHITVLMRA*SRSFRT Trigger: TGTTCTGAAGCTCCTAGACAAAGCTCGCATCAGTAC...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCTCCCCAAATCAACCTTCTCAACCCAAACTGATTGACAGTCACATCACTCTCTCAATCCAGTCTTaGAACGGCAACACCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QASPNQPSQPKLIDSHITLSIQS*NGNTFV Trigger: CACAAAGGTGTTGCCGTTCAAAGACTGGATTGAGAG...AGTGATGTGACTGTCAATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 90 bp | CAGAACATGTTGTCAGTGACACTAACTGGAATGCCATGGTCTTCATaGTGTTCCTCACAAAGCATTGGGTCTACCACTCTGACCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNMLSVTLTGMPWSS*CSSQSIGSTTLTIP Trigger: TGGAATGGTCAGAGTGGTAGACCCAATGCTTTGTGAGGAACAGCATGAAGACCATGGCATTCCAGTTAGTGTCACTGACAACATGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | ATTGACAGTCACATCACTCTGAGTGGAGCAGGAGCAAGAGGTTCTCCTTCTAGTAAGCCATCGAAGTTCTaGGAGCCATCAGAATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IDSHITLSGAGARGSPSSKPSKF*EPSEWK Trigger: TTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTT...ACTAGAAGGAGAACCTCTTGCTCCTGCTCCACTCAGAGTGATGTGACTGTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATAGCCAGGCAGATGGGTaGGACACGGGTACTGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDSQADG*DTGTDA Trigger: CGCATCAGTACCCGTGTCCAACCCATCTGCCTGGCT...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACACAGGGTGCCACACCTGGCACAGAACATGTaGTCAGTGACACTAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LERERIRQSCDNLHRVPHLAQNM*SVTLTG Trigger: TCCAGTTAGTGTCACTGACAACATGTTCTGTGCCAG...GTGTGGCACCCTGTGTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 90 bp | TCCATTCTGCTGGCAAGTTCGTTTCTCATTGCCACTCAGAACGTATaGGCCGTTACAAAAGAAAGACACAACCGTGCCAATTTTTACATG | + |
|
Preference number: 5 (lower is better) Translates to: SILLASSFLIATQNV*AVTKERHNRANFYM Trigger: CATGTAAAAATTGGCACGGTTGTGTCTTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTTGTAGGTCAGGGAGCAGACCTTGTTTTATTGAAATGTGTACAGAAGATTTTCCCAAGACAACCTaGAGGTCTGCTGTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFCRSGSRPCFIEMCTEDFPKTT*RSAVLM Trigger: CATCAAGACAGCAGACCTCAAGGTTGTCTTGGGAAA...ATCTTCTGTACACATTTCAATAAAACAAGGTCTGCTCCCTGACCTACAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTACAGAAGATTGGAAAGGGAAAGGATCAGACAATCTTGTGACAATTTACCTCCACATAGTCATATaGGCACATGTAGTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: MCTEDWKGKGSDNLVTIYLHIVI*AHVVKL Trigger: GAGTTTGACTACATGTGCCAATATGACTATGTGGAG...GTAAATTGTCACAAGATTGTCTGATCCTTTCCCTTTCCAATCTTCTGTACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 72 bp | CACCAAATGCCAGCGTGGCTCGGGGGATGCTCGGCCTaGGAAGGACAAAGCAGCGATGCCCCCTGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQMPAWLGGCSA*EGQSSDAPCLC Trigger: GCAGAGACAGGGGGCATCGCTGCTTTGTCCTTCCCAGGCCGAGCATCCCCCGAGCCACGCTGGCATTTGGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CGGGGGATGCTCGGCCTGGGAAGGACAAAGCAGCGATaGCCCCTGTCTCTGCAGTGCAGATGTCAGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGMLGLGRTKQR*PLSLQCRCQKG Trigger: CCCCTTCTGACATCTGCACTGCAGAGACAGGGGGCATCGCTGCTTTGTCCTTCCCAGGCCGAGCATCCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 72 bp | GACCACCATCGTGTACACCACTGGTCCTCCGGTAGATaGCTGCCTGCCATGGCCAGCGGGTGCCTTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DHHRVHHWSSGR*LPAMASGCLGS Trigger: AGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGTGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 72 bp | ACCATCGTGTACACCACTGGTCCTCCGGTAGATGGCTaGCTGCCATGGCCAGCGGGTGCCTTGGGTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TIVYTTGPPVDG*LPWPAGALGLW Trigger: CCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 72 bp | AGCGCTGCCCAGTGTAGCCAGCCAGGCAGGCACACTTaGAAGACCCAGTGGTGTCAAGGAGGCATGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SAAQCSQPGRHT*KTQWCQGGMCH Trigger: ATGGCACATGCCTCCTTGACACCACTGGGTCTTTCAAGTGTGCCTGCCTGGCTGGCTACACTGGGCAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 72 bp | CTGGCCACATCGCATGCAGTCTCCTCCGTACCAGCCTaGCCTGCACTCTGCGCAGTAGAATCCCTTCACGTA | + |
|
Preference number: 6 (lower is better) Translates to: LATSHAVSSVPA*PALCAVESLHV Trigger: TACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATGCGATGTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 72 bp | ATGCACCTTTGTGCAGACCACCATCGTGTACACCACTaGTCCTCCGGTAGATGGCTGCCTGCCATGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MHLCADHHRVHH*SSGRWLPAMAS Trigger: GCTGGCCATGGCAGGCAGCCATCTACCGGAGGACCAGTGGTGTACACGATGGTGGTCTGCACAAAGGTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 72 bp | GTGCTGAGGTCCCGAGTGGTAGCCAGGCAGATGGGTTaGACACGGGTACTGATGCGAGCTTTGTCTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLRSRVVARQMG*TRVLMRALSRS Trigger: GCTCCTAGACAAAGCTCGCATCAGTACCCGTGTCCAACCCATCTGCCTGGCTACCACTCGGGACCTCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CAA 72 bp | GCGGCGGTAGAAGGGCGAGATGCACTCATACTGGACTaGGGTGTGCAGATGTTGGTATCCAGGGGGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AAVEGRDALILD*GVQMLVSRGQV Trigger: GACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTCGCCCTTCTACCGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CAA 90 bp | GCTTCCCAGGCGGCGGTAGAAGGGCGAGATGCACTCATACTGGACTaGGGTGTGCAGATGTTGGTATCCAGGGGGCAGGTCTCCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASQAAVEGRDALILD*GVQMLVSRGQVSKW Trigger: CCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTCGCCCTTCTACCGCCGCCTGGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS TCA 72 bp | ATAGGCCATTGCTACATGTCTTGTCATAGCTCCAGCTaGCCAGCCCCACCAAATGCCAGCGTGGCTCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IGHCYMSCHSSS*PAPPNASVARG Trigger: CCCCCGAGCCACGCTGGCATTTGGTGGGGCTGGTCAGCTGGAGCTATGACAAGACATGTAGCAATGGCCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CCA 72 bp | GGCTGCCTGCCATGGCCAGCGGGTGCCTTGGGTCTTTaGAGAAGGAGTGCTCTCGATTTTTCCACAGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCLPWPAGALGL*RRSALDFSTDW Trigger: CCAATCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCATGGCAGGCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS CAA 90 bp | CCAGTGCTCCTGATGGGAGCTGGCCTCTCGTTGCCACAGAAACGCTaGATGATAGGGCTGTCACTATTATCCCCATCGCGGACCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PVLLMGAGLSLPQKR*MIGLSLLSPSRTST Trigger: TGTGGAGGTCCGCGATGGGGATAATAGTGACAGCCCTATCATCAAGCGTTTCTGTGGCAACGAGAGGCCAGCTCCCATCAGGAGCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
||
| CDS GCA 72 bp | CATGCAGTCTCCTCCGTACCAGCCTGCCCTGCACTCTaGGCAGTAGAATCCCTTCACGTAGAAGTCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HAVSSVPACPAL*AVESLHVEVIQ Trigger: CTGGATGACTTCTACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CACATCGCATGCAGTCTCCTCCGTACCAGCCTGCCCTaGACTCTGCGCAGTAGAATCCCTTCACGTAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HIACSLLRTSLP*TLRSRIPSRRS Trigger: ACTTCTACGTGAAGGGATTCTACTGCGCAGAGTGCAGGGCAGGCTGGTACGGAGGAGACTGCATGCGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | GGAAGGACAAAGCAGCGATGCCCCCTGTCTCTGCAGTaGAGATGTCAGAAGGGGTACTGGGATCTTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRTKQRCPLSLQ*RCQKGYWDLCW Trigger: CCAGCAAAGATCCCAGTACCCCTTCTGACATCTGCACTGCAGAGACAGGGGGCATCGCTGCTTTGTCCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | CTTTGGAGAAGGAGTGCTCTCGATTTTTCCACAGATTaGGATACAGGACGGGGCCCGCCCACTCCACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LWRRSALDFSTD*DTGRGPPTPLP Trigger: GGGAAGTGGAGTGGGCGGGCCCCGTCCTGTATCCCAATCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | ACATCTGCCAGGATGTTCCAGCCAGCCACAGTGATGTaGGATTCCTGGAAAGAGGTGCTGAGGTCCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSARMFQPATVM*DSWKEVLRSRV Trigger: CACTCGGGACCTCAGCACCTCTTTCCAGGAATCCCACATCACTGTGGCTGGCTGGAACATCCTGGCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | ACCAGGGCACCACTGCAGACCAAGAACCATGCACCTTaGTGCAGACCACCATCGTGTACACCACTGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRAPLQTKNHAP*CRPPSCTPLVL Trigger: GAGGACCAGTGGTGTACACGATGGTGGTCTGCACAAAGGTGCATGGTTCTTGGTCTGCAGTGGTGCCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | GTGTACTCTCTTGGCAACGATGAGATGAGAAGGAGCTaGAGGAACACCAGCCCCAACTGCGCCCATCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VYSLGNDEMRRS*RNTSPNCAHLS Trigger: AGACAGATGGGCGCAGTTGGGGCTGGTGTTCCTGCAGCTCCTTCTCATCTCATCGTTGCCAAGAGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CCACAACCACAGTCCGTTCATTCACCAGGGCACCACTaGAGACCAAGAACCATGCACCTTTGTGCAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQPQSVHSPGHH*RPRTMHLCADH Trigger: GTGGTCTGCACAAAGGTGCATGGTTCTTGGTCTGCAGTGGTGCCCTGGTGAATGAACGGACTGTGGTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | CTGATGGGAGCTGGCCTCTCGTTGCCACAGAAACGCTaGATGATAGGGCTGTCACTATTATCCCCATCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LMGAGLSLPQKR*MIGLSLLSPSR Trigger: CCGCGATGGGGATAATAGTGACAGCCCTATCATCAAGCGTTTCTGTGGCAACGAGAGGCCAGCTCCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | CGAGATGCACTCATACTGGACTTGGGTGTGCAGATGTaGGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDALILDLGVQM*VSRGQVSKWKG Trigger: GCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | TCTTTGGAGAAGGAGTGCTCTCGATTTTTCCACAGATaGGGATACAGGACGGGGCCCGCCCACTCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLEKECSRFFHR*GYRTGPAHSTS Trigger: GGAAGTGGAGTGGGCGGGCCCCGTCCTGTATCCCAATCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | AATGGAAAAGGACATGGAGTGAAGAGCCAGTGCTCCTaGTGGGAGCTGGCCTCTCGTTGCCACAGAAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: NGKGHGVKSQCS*WELASRCHRNA Trigger: AGCGTTTCTGTGGCAACGAGAGGCCAGCTCCCATCAGGAGCACTGGCTCTTCACTCCATGTCCTTTTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | GTTCTTGGAGCCATCAGAATGGAAAAGGACATGGAGTaGAGAGCCAGTGCTCCTGATGGGAGCTGGCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLGAIRMEKDME*RASAPDGSWPL Trigger: GAGAGGCCAGCTCCCATCAGGAGCACTGGCTCTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | GTCAAGGAGGCATGTGCCATCATGGAAACAAGGGGATaGGGAGCACGCTGTGATCTCCTCAAAGACAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VKEACAIMETRG*GARCDLLKDSV Trigger: CACGCTGTCTTTGAGGAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCATGATGGCACATGCCTCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | AACCTGCATCGAAAGGACTCTCCTTCTCACCAGGTCTaGGATCTTCGGTTCCCGGCAGGCTTTCATGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NLHRKDSPSHQV*DLRFPAGFHAD Trigger: GTCTGCATGAAAGCCTGCCGGGAACCGAAGATCTCAGACCTGGTGAGAAGGAGAGTCCTTTCGATGCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CCAGGTCTGAGATCTTCGGTTCCCGGCAGGCTTTCATaGAGACAGGTTGCTTTCCTGACCACTCTCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLRSSVPGRLS*RQVAFLTTLHS Trigger: AGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGCCTGCCGGGAACCGAAGATCTCAGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | ATGGCCAGCGGGTGCCTTGGGTCTTTGGAGAAGGAGTaGTCTCGATTTTTCCACAGATTGGGATACAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: MASGCLGSLEKE*SRFFHRLGYRT Trigger: CGTCCTGTATCCCAATCTGTGGAAAAATCGAGAGCACTCCTTCTCCAAAGACCCAAGGCACCCGCTGGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | GTGCAGATGTTGGTATCCAGGGGGCAGGTCTCCAAATaGAAGGGCTGGCTTTTTGGTAGAGGCATCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VQMLVSRGQVSK*KGWLFGRGILQ Trigger: TTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | GAGATGCACTCATACTGGACTTGGGTGTGCAGATGTTaGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EMHSYWTWVCRC*YPGGRSPNGRA Trigger: AGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | CACAGTGAGCGTTTAAGGGATAGCTCTCCAACAAGATCTGACCCTTaGAGGCTCGAAGAACCTGGCCACATCGCATGCAGTCTCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HSERLRDSSPTRSDP*RLEEPGHIACSLLR Trigger: ACGGAGGAGACTGCATGCGATGTGGCCAGGTTCTTCGAGCCTCAAAGGGTCAGATCTTGTTGGAGAGCTATCCCTTAAACGCTCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | GTAGAAGGGCGAGATGCACTCATACTGGACTTGGGTGTGCAGATGTaGGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGCTGGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VEGRDALILDLGVQM*VSRGQVSKWKGWLF Trigger: AAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACATCTGCACACCCAAGTCCAGTATGAGTGCATCTCGCCCTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | TGCCATCATGGAAACAAGGGGATGAGGAGCACGCTGTaGTCTCCTCAAAGACAGCGTGGAAGCCATCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CHHGNKGMRSTL*SPQRQRGSHRS Trigger: ACTTCGATGGCTTCCACGCTGTCTTTGAGGAGATCACAGCGTGCTCCTCATCCCCTTGTTTCCATGATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CCAGAGTTCCGCCCCAGGAGCCATTGCGGCAGCTCTTaGAGTTTTCAAAGATGGTACAACCTGGGTGAATTA | + |
|
Preference number: 6 (lower is better) Translates to: PEFRPRSHCGSS*SFQRWYNLGEL Trigger: TAATTCACCCAGGTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCGGAACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | CGTAGAAGTCATCCAGAGTTCCGCCCCAGGAGCCATTaGGGCAGCTCTTGCAGTTTTCAAAGATGGTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRSHPEFRPRSH*GSSCSFQRWYN Trigger: GTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATGGCTCCTGGGGCGGAACTCTGGATGACTTCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | ATCTTCGGTTCCCGGCAGGCTTTCATGCAGACAGGTTaGTTTCCTGACCACTCTCCATTCTGCTGGCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IFGSRQAFMQTG*FPDHSPFCWQV Trigger: AACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCATGAAAGCCTGCCGGGAACCGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | GCGTGGAAGCCATCGAAGTTCTTGGAGCCATCAGAATaGAAAAGGACATGGAGTGAAGAGCCAGTGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWKPSKFLEPSE*KRTWSEEPVLL Trigger: CAGGAGCACTGGCTCTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | GATGAGGAGCACGCTGTGATCTCCTCAAAGACAGCGTaGAAGCCATCGAAGTTCTTGGAGCCATCAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: DEEHAVISSKTA*KPSKFLEPSEW Trigger: CCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGAGGAGATCACAGCGTGCTCCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | CCAGGGGGCAGGTCTCCAAATGGAAGGGCTGGCTTTTaGGTAGAGGCATCCTGCAATTTCTGCTTGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGGRSPNGRAGF*VEASCNFCLLK Trigger: TTTCAGCAAGCAGAAATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | TGTTGGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGCTGGCTTTTaGGTAGAGGCATCCTGCAATTTCTGCTTGCTGAAAGCCGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CWYPGGRSPNGRAGF*VEASCNFCLLKAVE Trigger: TTCCACGGCTTTCAGCAAGCAGAAATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | CACGCTGTGATCTCCTCAAAGACAGCGTGGAAGCCATCGAAGTTCTaGGAGCCATCAGAATGGAAAAGGACATGGAGTGAAGAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HAVISSKTAWKPSKF*EPSEWKRTWSEEPV Trigger: CACTGGCTCTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGAGGAGATCACAGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | GTCCCTGTAGAATTTTCCCAAGACAACCTTGAGGTCTaGTGTCTTGATGATGGTGGCCTTCCCCAGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPVEFSQDNLEV*CLDDGGLPQLS Trigger: ACTGAGCTGGGGAAGGCCACCATCATCAAGACAGCAGACCTCAAGGTTGTCTTGGGAAAATTCTACAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | TTGGTATCCAGGGGGCAGGTCTCCAAATGGAAGGGCTaGCTTTTTGGTAGAGGCATCCTGCAATTTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVSRGQVSKWKG*LFGRGILQFLL Trigger: AAGCAGAAATTGCAGGATGCCTCTACCAAAAAGCCAGCCCTTCCATTTGGAGACCTGCCCCCTGGATACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | CGTTTAAGGGATAGCTCTCCAACAAGATCTGACCCTTaGAGGCTCGAAGAACCTGGCCACATCGCATGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLRDSSPTRSDP*RLEEPGHIACS Trigger: ACTGCATGCGATGTGGCCAGGTTCTTCGAGCCTCAAAGGGTCAGATCTTGTTGGAGAGCTATCCCTTAAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | ATGCAGACAGGTTGCTTTCCTGACCACTCTCCATTCTaGTGGCAAGTTCGTTTCTCATTGCCACTCAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: MQTGCFPDHSPF*WQVRFSLPLRT Trigger: CGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | CAGATGTCAGAAGGGGTACTGGGATCTTTGCTGGCACAGAACATGTaGTCAGTGACACTAACTGGAATGCCATGGTCTTCATGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QMSEGVLGSLLAQNM*SVTLTGMPWSSCCS Trigger: GGAACAGCATGAAGACCATGGCATTCCAGTTAGTGTCACTGACAACATGTTCTGTGCCAGCAAAGATCCCAGTACCCCTTCTGACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | AGTCACATTCATTATCCTCATTCCTGCAGCATGGGATaGTGTAACCCACCACTTCCTTCTTTCCTGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHIHYPHSCSMG*CNPPLPSFLGR Trigger: TCTGCCCAGGAAAGAAGGAAGTGGTGGGTTACACCATCCCATGCTGCAGGAATGAGGATAATGAATGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | ACAGGAGTCACATTCATTATCCTCATTCCTGCAGCATaGGATGGTGTAACCCACCACTTCCTTCTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGVTFIILIPAA*DGVTHHFLLSW Trigger: CCAGGAAAGAAGGAAGTGGTGGGTTACACCATCCCATGCTGCAGGAATGAGGATAATGAATGTGACTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | TCTCCTCAAAGACAGCGTGGAAGCCATCGAAGTTCTTaGAGCCATCAGAATGGAAAAGGACATGGAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPQRQRGSHRSS*SHQNGKGHGVK Trigger: CTTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | CAGACAGGTTGCTTTCCTGACCACTCTCCATTCTGCTaGCAAGTTCGTTTCTCATTGCCACTCAGAACGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QTGCFPDHSPFC*QVRFSLPLRTY Trigger: ATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCAACCTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 90 bp | TGCTTTCCTGACCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCATaGCCACTCAGAACGTATGAGCCGTTACAAAAGAAAGACACAACC | + |
|
Preference number: 6 (lower is better) Translates to: CFPDHSPFCWQVRFS*PLRTYEPLQKKDTT Trigger: GGTTGTGTCTTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTCAGGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | AGGAGCCATTGCGGCAGCTCTTGCAGTTTTCAAAGATaGTACAACCTGGGTGAATTAGACAGGAGTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: RSHCGSSCSFQR*YNLGELDRSHI Trigger: AATGTGACTCCTGTCTAATTCACCCAGGTTGTACCATCTTTGAAAACTGCAAGAGCTGCCGCAATGGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | ATCTCCTCAAAGACAGCGTGGAAGCCATCGAAGTTCTaGGAGCCATCAGAATGGAAAAGGACATGGAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ISSKTAWKPSKF*EPSEWKRTWSE Trigger: TTCACTCCATGTCCTTTTCCATTCTGATGGCTCCAAGAACTTCGATGGCTTCCACGCTGTCTTTGAGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS TCA 72 bp | CTGGCAAGTTCGTTTCTCATTGCCACTCAGAACGTATaGGCCGTTACAAAAGAAAGACACAACCGTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LASSFLIATQNV*AVTKERHNRAN Trigger: ATTGGCACGGTTGTGTCTTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS GCA 72 bp | ACCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCATTaGCACTCAGAACGTATGAGCCGTTACAAAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTLHSAGKFVSH*HSERMSRYKRK Trigger: CTTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | CAGAACATGTTGTCAGTGACACTAACTGGAATGCCATaGTCTTCATGCTGTTCCTCACAAAGCATTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QNMLSVTLTGMP*SSCCSSQSIGS Trigger: AGACCCAATGCTTTGTGAGGAACAGCATGAAGACCATGGCATTCCAGTTAGTGTCACTGACAACATGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CAA 72 bp | GACCACTCTCCATTCTGCTGGCAAGTTCGTTTCTCATaGCCACTCAGAACGTATGAGCCGTTACAAAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: DHSPFCWQVRFS*PLRTYEPLQKK Trigger: TTTCTTTTGTAACGGCTCATACGTTCTGAGTGGCAATGAGAAACGAACTTGCCAGCAGAATGGAGAGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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| CDS CCA 72 bp | TTACAAAAGAAAGACACAACCGTGCCAATTTTTACATaGCGCTCATTGAGAAGTCCAGGACCTTCTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: LQKKDTTVPIFT*RSLRSPGPSVI Trigger: AATCACAGAAGGTCCTGGACTTCTCAATGAGCGCCATGTAAAAATTGGCACGGTTGTGTCTTTCTTTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028612.8 |
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