Pregenerated sensors for PALD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020092Ensembl transcript IDs: ENSMUST00000020289.10
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGACCAGGGATCCTGGCAGGGGTGGGCCTGGACCCTTAAGGTCTaGCAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: ADQGSWQGWAWTLKV*QATTACVHKSLSQE Trigger: CTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGACCTTAAGGGTCCAGGCCCACCCCTGCCAGGATCCCTGGTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | ACGGGGAGGAGAGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTaGCACTCACGAGCCAGAAGGAGCCGGACAGAGCTGCCTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: TGRREGSHSLSLPGR*HSRARRSRTELPLL Trigger: CAATAAAGGCAGCTCTGTCCGGCTCCTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCTCTCCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | ACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTaGAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: TRPACCPLRQSDDQQ*RGDRGGDWLFGDRA Trigger: AGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CCA 90 bp | GAGCCAGAAGGAGCCGGACAGAGCTGCCTTTATTGTAGACCTGCCTaGCTCACCATCCTCCTCACCTACCTCAGGCAGCTGCCTGGGATG | + |
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Preference number: 1 (lower is better) Translates to: EPEGAGQSCLYCRPA*LTILLTYLRQLPGM Trigger: CATCCCAGGCAGCTGCCTGAGGTAGGTGAGGAGGATGGTGAGCCAGGCAGGTCTACAATAAAGGCAGCTCTGTCCGGCTCCTTCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR GCA 90 bp | TTCCAGGCCGGTGACACTCACGAGCCAGAAGGAGCCGGACAGAGCTaGCTTTATTGTAGACCTGCCTGGCTCACCATCCTCCTCACCTAC | + |
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Preference number: 1 (lower is better) Translates to: FQAGDTHEPEGAGQS*LYCRPAWLTILLTY Trigger: GTAGGTGAGGAGGATGGTGAGCCAGGCAGGTCTACAATAAAGGCAGCTCTGTCCGGCTCCTTCTGGCTCGTGAGTGTCACCGGCCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CCA 90 bp | ACCTGCCTGGCTCACCATCCTCCTCACCTACCTCAGGCAGCTGCCTaGGATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: TCLAHHPPHLPQAAA*DERLRDKSKPVRGR Trigger: CCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGCTGCCTGAGGTAGGTGAGGAGGATGGTGAGCCAGGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | CCTGGCTCACCATCCTCCTCACCTACCTCAGGCAGCTGCCTGGGATaGAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PGSPSSSPTSGSCLG*KTERQEQASQRKEV Trigger: CACTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGCTGCCTGAGGTAGGTGAGGAGGATGGTGAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | TGTCAATGGTCTCTGACTTCCTTCCCCACACTAAGAGGGTCTCCCTaGTGCTTCCAACTCCCTGGGCACATGGGCCAACATAGGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: CQWSLTSFPTLRGSP*CFQLPGHMGQHREG Trigger: TCCTTCCCTATGTTGGCCCATGTGCCCAGGGAGTTGGAAGCATCAGGGAGACCCTCTTAGTGTGGGGAAGGAAGTCAGAGACCATTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | GATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTaGAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: DERLRDKSKPVRGRK*KYKRDQPAVHSGSL Trigger: CAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 90 bp | ACCATCCTCCTCACCTACCTCAGGCAGCTGCCTGGGATGAAAGACTaGGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTGAAAATACA | + |
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Preference number: 1 (lower is better) Translates to: TILLTYLRQLPGMKD*ETRASQSEEGSENT Trigger: TGTATTTTCACTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGCTGCCTGAGGTAGGTGAGGAGGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR GCA 90 bp | CAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCTaGTCATTACTCAGCAGTGTCCCAGTGTGTCCTGGAGAAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: QTQPSLPLFPLCVIS*SLLSSVPVCPGESR Trigger: TCTGCTTTCTCCAGGACACACTGGGACACTGCTGAGTAATGAGCAGCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACGAGCCAGAAGGTCCATCCGAAGCAATaGGACCCTCAGGTCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RGEPFPQSSRPVTLTSQKVHPKQ*DPQVPQ Trigger: TTGGGGGACCTGAGGGTCTCATTGCTTCGGATGGAC...CTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACGAGCCAGAAGCAAACGCGACCAGCCTaGTGTCCACTCAGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: RGEPFPQSSRPVTLTSQKQTRPA*CPLRQS Trigger: AGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTG...CTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTGCAGACCAGGGATCCTaGCAGGGGTGGGCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPADQGS*QGWAWT Trigger: GGTCCAGGCCCACCCCTGCCAGGATCCCTGGTCTGC...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTAGGGGACAGAGGTGGTaGCTGGCTGTTTGGGGATCG | + |
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Preference number: 2 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLRGQRW*LAVWGS Trigger: CGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCT...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCGTTGACAGAAAATGGTaGTGCCATCTTACACCCTAC | + |
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Preference number: 2 (lower is better) Translates to: EEGTEVVTGCLGIELPEGVDRKW*CHLTPY Trigger: GTAGGGTGTAAGATGGCACCACCATTTTCTGTCAAC...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCTGGGATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTTGCCAGTTGGTCTGTaGGGTACATGTGCTAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: AAWDERLRDKSKPVRGRKLPVGL*GTCARP Trigger: AGGCCTAGCACATGTACCTCACAGACCAACTGGCAA...CTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCTGGGATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTCCCTGAAGGCTGCTTaGCAGTTGGTCTGTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: AAWDERLRDKSKPVRGRKSLKAA*QLVCEV Trigger: TACCTCACAGACCAACTGGCAAGCAGCCTTCAGGGA...CTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CAA 90 bp | AATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTaGGCCTCTTCAAATAGCACAGCTGGCATCTTCCTGAAGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: NSAKRVTTLPRLGTT*ASSNSTAGIFLKDS Trigger: GCTGTCCTTCAGGAAGATGCCAGCTGTGCTATTTGAAGAGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCTCTGACGACCAACAGTaGAGAGGGGACAGAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RLNQTQPSLPLFPLCVISSDDQQ*RGDRGG Trigger: ACCACCTCTGTCCCCTCTTCACTGTTGGTCGTCAGA...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACGTCAGAGGAAGGAAGTaGAAATACAAACGCGACCAG | + |
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Preference number: 2 (lower is better) Translates to: CQPQECEGSLWPLTHWLDVRGRK*KYKRDQ Trigger: CTGGTCGCGTTTGTATTTTCACTTCCTTCCTCTGAC...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACTCTTCACTGTGTCAATaGTCTCTGACTTCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLASDSLARPFLKSTDLYSSLCQ*SLTSFP Trigger: GGGGAAGGAAGTCAGAGACCATTGACACAGTGAAGA...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | AGAGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTaGCACTCACGAGCCAGAAGGAGCCGGACAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: REGSHSLSLPGR*HSRARRSRTEL Trigger: CAGCTCTGTCCGGCTCCTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | GGATCCTGGCAGGGGTGGGCCTGGACCCTTAAGGTCTaGCAAGCCACCACGGCCTGTGTCCACAAGAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: GSWQGWAWTLKV*QATTACVHKSL Trigger: GAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGACCTTAAGGGTCCAGGCCCACCCCTGCCAGGATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | GCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTaGAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: ACCPLRQSDDQQ*RGDRGGDWLFG Trigger: CCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CCA 72 bp | GGAGCCGGACAGAGCTGCCTTTATTGTAGACCTGCCTaGCTCACCATCCTCCTCACCTACCTCAGGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: GAGQSCLYCRPA*LTILLTYLRQL Trigger: CAGCTGCCTGAGGTAGGTGAGGAGGATGGTGAGCCAGGCAGGTCTACAATAAAGGCAGCTCTGTCCGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACGAGCCAGAAGTACGCACCCCGAAGGTaGACAGAAAATGGTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RGEPFPQSSRPVTLTSQKYAPRR*TENGGA Trigger: GGCACCACCATTTTCTGTCAACCTTCGGGGTGCGTA...CTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR GCA 72 bp | CTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCTGCTTaGCAGTTGGTCTGTGAGGTACATGTGCTAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LAVWGSSSLKAA*QLVCEVHVLGL Trigger: CAGGCCTAGCACATGTACCTCACAGACCAACTGGCAAGCAGCCTTCAGGGAGCTCGATCCCCAAACAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGAAGGCTGCTTGCCAGTaGGTCTGTGAGGTACATGTG | + |
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Preference number: 3 (lower is better) Translates to: QPAVHSGSLTTNSEEGTEKAACQ*VCEVHV Trigger: CACATGTACCTCACAGACCAACTGGCAAGCAGCCTT...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | ATCGAGCTCCCTGAAGGCTGCTTGCCAGTTGGTCTGTaGGGTACATGTGCTAGGCCTGGCCAGAGGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: IELPEGCLPVGL*GTCARPGQRPL Trigger: TAATGGCCTCTGGCCAGGCCTAGCACATGTACCTCACAGACCAACTGGCAAGCAGCCTTCAGGGAGCTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | AGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTaGAGGCTGCTTGCCAGTTGGTCTGTGAGGTACATG | + |
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Preference number: 3 (lower is better) Translates to: RGGDWLFGDRAP*RLLASWSVRYM Trigger: CATGTACCTCACAGACCAACTGGCAAGCAGCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR GCA 72 bp | CCATCCGAAGCAATGAGACCCTCAGGTCCCCCAACCTaGCTAGCAAGGGGCAAGAAGAAGGCCTATAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PSEAMRPSGPPT*LARGKKKAYRK Trigger: CTTCCTATAGGCCTTCTTCTTGCCCCTTGCTAGGCAGGTTGGGGGACCTGAGGGTCTCATTGCTTCGGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | TCTCTGACTTCCTTCCCCACACTAAGAGGGTCTCCCTaGTGCTTCCAACTCCCTGGGCACATGGGCCAACAT | + |
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Preference number: 3 (lower is better) Translates to: SLTSFPTLRGSP*CFQLPGHMGQH Trigger: ATGTTGGCCCATGTGCCCAGGGAGTTGGAAGCATCAGGGAGACCCTCTTAGTGTGGGGAAGGAAGTCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR GCA 72 bp | CCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCTaGTCATTACTCAGCAGTGTCCCAGTGTGTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PSLPLFPLCVIS*SLLSSVPVCPG Trigger: TCCAGGACACACTGGGACACTGCTGAGTAATGAGCAGCTTATTACACACAATGGGAAGAGGGGCAGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CAA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACAGGCTGGGAACAACTTaGGCCTCTTCAAATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: CQPQECEGSLWPLTHWLDRLGTT*ASSNST Trigger: TGTGCTATTTGAAGAGGCCAAAGTTGTTCCCAGCCT...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | CTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGTaGAAATACAAACGCGACCAGCCTGCTGTCCACTCA | + |
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Preference number: 3 (lower is better) Translates to: LRDKSKPVRGRK*KYKRDQPAVHS Trigger: TGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CCA 72 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTaGGAACAACTTTGGCCTCTTCAAATAGCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: RIQLRGSPLSPG*EQLWPLQIAQL Trigger: CAGCTGTGCTATTTGAAGAGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR TCA 72 bp | CTTTGGCCTCTTCAAATAGCACAGCTGGCATCTTCCTaGAGGACAGCTACCCAGAGATTCATCCTTGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LWPLQIAQLASS*RTATQRFILVL Trigger: AAGGACAAGGATGAATCTCTGGGTAGCTGTCCTTCAGGAAGATGCCAGCTGTGCTATTTGAAGAGGCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACCAGACATACAGCAGCTaGCAAAAGAATTCAGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: SLASDSLARPFLKSTDLYQTYSS*QKNSAK Trigger: CTTAGCTGAATTCTTTTGCAAGCTGCTGTATGTCTG...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | GACGGGGAGGAGAGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCTCCAGAGCCTCCAGATaGTCAGGGGCCAGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DGEERGEPFPQSSRPVTLSRASR*SGARAG Trigger: ACCAGCCCTGGCCCCTGAGCATCTGGAGGCTCTGGA...GAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCTCTCCTCCCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCCCAAGGCAGGCCCCCTaGTGCTGGCTGAAGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGPRQAP*CWLKTS Trigger: GGAGGTCTTCAGCCAGCACCAGGGGGCCTGCCTTGG...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | CAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCTCTGGGTGGTAGTGCTCGGGGGTaGCATCCGAGAGCCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QGARRRPIGSPQHHRALGGSARG*HPRAGP Trigger: TGGGCCGGCTCTCGGATGCCACCCCCGAGCACTACC...ACCCAGAGCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCGTTGTGGTCCGGCCCTaGCCACTGAGGCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGVVVRP*PLRQLK Trigger: CTTCAGCTGCCTCAGTGGCCAGGGCCGGACCACAAC...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TGCCTAGCAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCGGCTGTCCATGCTGCTaGTGCTGCCACCCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CLARGKKKAYRKSPASQGGCPCC*CCHPAG Trigger: GCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCC...GCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTGCTAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTAGGCCTCCCCGCACCTaGCGGAAGTTGGGAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLRPPRT*RKLGAP Trigger: TGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCT...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGGGCTGGGCTGTCCCATaGCAAACACAGGGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QPAVHSGSLTTNSEEGTEGWAVP*QTQGGL Trigger: GAGGCCTCCCTGTGTTTGGCATGGGACAGCCCAGCC...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACGAGCCAGAAGGGTGGTATCTGTAGGTaGGCTGCAGGAAGAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGEPFPQSSRPVTLTSQKGGICR*AAGRAA Trigger: GGCCGCTCTTCCTGCAGCCCACCTACAGATACCACC...CTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCAAGGTGGGCCTTCAGCTaGGCCTCCAGAGCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQPRLNQTQPSLPLFPRWAFS*ASRASR Trigger: TCTGGAGGCTCTGGAGGCCCAGCTGAAGGCCCACCT...TGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCGGTTCTGCCTACACCTaGCTGGCAGCTGAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGGSAYT*LAAEQE Trigger: CTCCTGTTCAGCTGCCAGTCAGGTGTAGGCAGAACC...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTTGCCCGGGTCCTTGGTaGGAGCAGCTCGCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYKRDQPAVHSGSLTTNSCPGPW*EQLAGP Trigger: AGGCCCTGCGAGCTGCTCTCACCAAGGACCCGGGCA...ACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTCTGCTGCTGCCACCCTaGAGGCCCTCCAAGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLLLLPP*RPSKDV Trigger: CACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAG...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TGCCTAGCAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCTGTCCATGCTGCTGCTaGTGCCACCCTGCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLARGKKKAYRKSPASQGCPCCC*CHPAGP Trigger: AGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACA...GCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTGCTAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCAGCACCTGCCGGAAGTTaGGAGCCCCACAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQPRLNQTQPSLPLFPAPAGS*EPHSSS Trigger: TGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGC...TGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCGCAGGCAGAGGCCCGTaGTTATCTCTGAGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGAGRGP*LSLSGR Trigger: TCTGCCACTCAGAGATAACCACGGGCCTCTGCCTGC...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACGAGCCAGAAGCCACCTTGTTGGGGATaGTGGACTTGGCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGEPFPQSSRPVTLTSQKPPCWG*WTWPCC Trigger: ACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGG...CTTCTGGCTCGTGAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGAAGCCCTGGATCACCTaGAACTGCTCCATGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPAVHSGSLTTNSEEGTEKPWIT*NCSMGR Trigger: CCTGCCCATGGAGCAGTTTCAGGTGATCCAGGGCTT...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTCCCGGCTCTCTGGCCTaGAGCTTTCCAGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLPGSLA*SFPASS Trigger: AGAGGAGGCTGGAAAGCTTCAGGCCAGAGAGCCGGG...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCTGCTGGACAGCTTGCTaGCTACCACATTCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGCWTAC*LPHSCP Trigger: GGGACAGGAATGTGGTAGTCAGCAAGCTGTCCAGCA...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTCCCGCATCCAGGTGCTaGAAGGCCTCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPPASRC*KASARS Trigger: GCTCCTGGCAGAGGCCTTTCAGCACCTGGATGCGGG...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR GCA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACGCTGGCTGTCCATGCTaGTGCTGCTGCCACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CQPQECEGSLWPLTHWLDAGCPC*CCCHPA Trigger: TGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGC...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGAATGCTGGCTGTCCATaGTGCTGCTGCTGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPAVHSGSLTTNSEEGTENAGCP*CCCCHP Trigger: AGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATT...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGCTGCCTACACCTGACTaGCAGCTGAACAGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPAVHSGSLTTNSEEGTELPTPD*QLNRRA Trigger: TGCCCTCCTGTTCAGCTGCCAGTCAGGTGTAGGCAG...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTGCCCGTGGTTATCTCTaGGTGGCAGAAGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPARGYL*VAEGWG Trigger: CCCCCAGCCTTCTGCCACTCAGAGATAACCACGGGC...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTGACCAAGGGCCCCACTaGATTCAGCTCCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLDQGPH*IQLHQQ Trigger: CTGCTGGTGGAGCTGAATTCAGTGGGGCCCTTGGTC...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTGCACGGCTACCACCATaGCAGTTGTGGTCCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPARLPP*QLWSGP Trigger: AGGGCCGGACCACAACTGCCATGGTGGTAGCCGTGC...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AGGAAGGAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTTCTGCAGGACCCTCCTaGACCCCAAGAGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKEVKIQTRPACCPLRQSSAGPS*TPRGWA Trigger: AGCCCAGCCTCTTGGGGTTCAGGAGGGTCCTGCAGA...AGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGTCCCTGAGGTTCTCATaGAGGCTCTCCTTGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPAVHSGSLTTNSEEGTESLRFS*RLSLSR Trigger: TCGAGACAAGGAGAGCCTTCATGAGAACCTCAGGGA...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TGGCAAACTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCGAGACTGTCTGCTGTaGTGTGCTTGCCGTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: WQTSVPAETQPNTALSAPRDCLL*CACRCT Trigger: GGTACAACGGCAAGCACAGCACAGCAGACAGTCTCG...AGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAGTTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TCTGACAAGCCACCACGGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTTGATGCCAGCTTTGGTTaGCACCTCCCGCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKPPRPVSTRVSPKSHLDASFG*HLPHPG Trigger: ACCTGGATGCGGGAGGTGGCAACCAAAGCTGGCATC...AAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCCGTGGTGGCTTGTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GCTGCCTGGGATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGCTGTCCCCGGCTCTCTaGCCTGAAGCTTTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAWDERLRDKSKPVRGRKLSPAL*PEAFQP Trigger: AGGCTGGAAAGCTTCAGGCCAGAGAGCCGGGGACAG...CTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATGTGGTCAGGCACTTCTaGAACCTGGGGGCAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AETQPNTALSAPLPIVCNVVRHF*NLGAVG Trigger: CCCTACTGCCCCCAGGTTCCAGAAGTGCCTGACCAC...ATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTTCCTTCTTCACGTGGTaGCCGTCGGGCAGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYKRDQPAVHSGSLTTNSSFFTW*PSGSSC Trigger: ACAGCTGCTGCCCGACGGCCACCACGTGAAGAAGGA...ACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CAA 72 bp | AACAGTGAAGAGGGGACAGAGGTGGTGACTGGCTGTTaGGGGATCGAGCTCCCTGAAGGCTGCTTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSEEGTEVVTGC*GIELPEGCLPV Trigger: AACTGGCAAGCAGCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTCACTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCCACCTGACTGGCAGCTaGACAGGAGGGCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLNQTQPSLPLFPLCVISHLTGS*TGGQAE Trigger: CTCTGCCTGCCCTCCTGTTCAGCTGCCAGTCAGGTG...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACGGAAGCCCAGCTGGTTaGGGATCTCATAGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQPQECEGSLWPLTHWLDGSPAG*GSHRCQ Trigger: CTGGCATCTATGAGATCCTCAACCAGCTGGGCTTCC...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | CAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCTCTGGGTTCCTCCTTCAGGTCATaGAACTCTGCACAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGARRRPIGSPQHHRALGSSFRS*NSAQAL Trigger: CAGTGCCTGTGCAGAGTTGCATGACCTGAAGGAGGA...ACCCAGAGCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCGGTGTTGGGGACAGGTaGGCTCAGGTGGGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLNQTQPSLPLFPLCVISGVGDR*AQVGLQ Trigger: CTGAAGGCCCACCTGAGCGCACCTGTCCCCAACACC...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | AAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGTGCTGAAAGGCCTCTaGCAGGAGCTGGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYKRDQPAVHSGSLTTNSVLKGL*QELVFS Trigger: GGAGAAGACCAGCTCCTGGCAGAGGCCTTTCAGCAC...ACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCTCAGCCTTGACCCCTaGACTAGGGTCCCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVKIQTRPACCPLRQSDDLSLDP*TRVPEV Trigger: AACCTCAGGGACCCTAGTCCAGGGGTCAAGGCTGAG...GTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGGGGACAGAGGTGGTGACTGGCTGTTTGGGGATCGAGCTCCCTGAAGGCTCATGGATCTCTTTCTaGATGGCCAGCTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: EEGTEVVTGCLGIELPEGSWISF*MASSRF Trigger: GAATCTGGAGCTGGCCATCCAGAAAGAGATCCATGA...GCCTTCAGGGAGCTCGATCCCCAAACAGCCAGTCACCACCTCTGTCCCCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACCCATGGGCAGGGGTTTaGCCAACGGGGAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLASDSLARPFLKSTDLYPWAGV*PTGRLP Trigger: AGGCAGCCTCCCCGTTGGCCAAACCCCTGCCCATGG...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| 3UTR CAA 72 bp | CTAGGCCTGGCCAGAGGCCATTACGCACCCCGAAGGTaGACAGAAAATGGTGGTGCCATCTTACACCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGLARGHYAPRR*TENGGAILHPT Trigger: TGTAGGGTGTAAGATGGCACCACCATTTTCTGTCAACCTTCGGGGTGCGTAATGGCCTCTGGCCAGGCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR TCA 90 bp | GAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACGAAACTCGCCTTTGGTaGACTTGGCATCAGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: EVKIQTRPACCPLRQSDDETRLW*TWHQAR Trigger: GCGTGCCTGATGCCAAGTTCACCAAAGGCGAGTTTC...GTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | AGGAAGGAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTTCCGTCTGGAGTTTCTaGAGGACCCTCCTGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKEVKIQTRPACCPLRQSSVWSF*RTLLNP Trigger: GGGGTTCAGGAGGGTCCTGCAGAAACTCCAGACGGA...AGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | AAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGGGTTCCCAGGACCATaGCTAGGTTGGTTCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KYKRDQPAVHSGSLTTNSGFPGP*LGWFCL Trigger: TAGGCAGAACCAACCTAGGCATGGTCCTGGGAACCC...ACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | TGGCAAACTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTGGATCTCTTTCTGGATaGCCAGCTCCAGATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQTSVPAETQPNTALSAPGSLSG*PAPDSQ Trigger: CTGAGAATCTGGAGCTGGCCATCCAGAAAGAGATCC...AGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAGTTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTGTGGTTATCTCTGAGTaGCAGAAGGCTGGGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPVVISE*QKAGGL Trigger: GAGACCCCCAGCCTTCTGCCACTCAGAGATAACCAC...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR CCA 90 bp | AAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTCGGTACAGCTCAGGATaGGTACACAGCCATCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KYKRDQPAVHSGSLTTNSRYSSG*VHSHRL Trigger: CAGTCGATGGCTGTGTACCCATCCTGAGCTGTACCG...ACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACACCTCCTTCTTCACGTaGTGGCCGTCGGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLASDSLARPFLKSTDLYTSFFT*WPSGSS Trigger: GCTGCTGCCCGACGGCCACCACGTGAAGAAGGAGGT...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| 3UTR CAA 72 bp | GGCCTGTGTCCACAAGAGTCTCTCCCAAGAGTCACCTaGGTCCTGCTAACAGGCTTCCAACACATGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCPQESLPRVT*VLLTGFQHMIL Trigger: CAGGATCATGTGTTGGAAGCCTGTTAGCAGGACCAAGGTGACTCTTGGGAGAGACTCTTGTGGACACAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR TCA 90 bp | GCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATGTGGCACCTTACAGATaGAGCCCTGGATCACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AETQPNTALSAPLPIVCNVAPYR*SPGSPE Trigger: TTCAGGTGATCCAGGGCTTCATCTGTAAGGTGCCAC...ATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACGAGGCTGCCTCTAGCTaGGAGGTGGTCCTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLASDSLARPFLKSTDLYEAASS*EVVLLW Trigger: CCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTC...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCCATTTTCTTCCCCTGTaGCACCTTACAGATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLARGKKKAYRKSPASQGHFLPL*HLTDEA Trigger: GGCTTCATCTGTAAGGTGCCACAGGGGAAGAAAATG...GCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTGCTAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
||
| CDS-3UTR TCA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCCCTTGCAGTTGTACGTaGTCACAACAGGGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLNQTQPSLPLFPLCVISPCSCT*SQQGPP Trigger: AGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGG...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACCCAGCCGAGACTGTCTaGTGTGCTGTGCTTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: SLASDSLARPFLKSTDLYPAETV*CAVLAV Trigger: AACGGCAAGCACAGCACAGCAGACAGTCTCGGCTGG...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACCACAGCTCTTCAAGGTaGCCAGTATGTCCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CQPQECEGSLWPLTHWLDHSSSR*PVCPSS Trigger: AGAAGATGGACATACTGGGCACCTTGAAGAGCTGTG...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | GCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATTGTTGTGTAAACTTGTaGCACGGAAGGACTGCACGC | + |
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Preference number: 4 (lower is better) Translates to: AETQPNTALSAPLPIVCNCCVNL*HGRTAR Trigger: GCGTGCAGTCCTTCCGTGCCACAAGTTTACACAACA...ATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTAGCTCATCGTGGATCTaGAACTCCTCCTTGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPSSSWI*NSSLQL Trigger: CAACTGCAAGGAGGAGTTCCAGATCCACGATGAGCT...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | TGGCAAACTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTAATTGGGCAAAGTCATaGATCTCTTTCTGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WQTSVPAETQPNTALSAPNWAKS*ISFWMA Trigger: GGCCATCCAGAAAGAGATCCATGACTTTGCCCAATT...AGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAGTTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR GCA 90 bp | TCTCTGGCCTCTGACTCACTGGCTAGACCTTTTCTGAAAAGCACTGACTTGTACCAGGTCATGCAACTCTaGACAGGCACTGATCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLASDSLARPFLKSTDLYQVMQL*TGTDRS Trigger: CGAGCGATCAGTGCCTGTGCAGAGTTGCATGACCTG...GTACAAGTCAGTGCTTTTCAGAAAAGGTCTAGCCAGTGAGTCAGAGGCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTTTGAGCAGCTCATCGTaGATCTGGAACTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKEVKIQTRPACCPLRQSLSSSS*IWNSSL Trigger: CAAGGAGGAGTTCCAGATCCACGATGAGCTGCTCAA...AGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCAACATTATCTCTCAATTaGGCAAAGTCATGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSQPRLNQTQPSLPLFPTLSLN*AKSWIS Trigger: AGAGATCCATGACTTTGCCCAATTGAGAGATAATGT...TGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | CACGGAAGGACTGCACGCCACCAAGAGAATGCTGGCTGTCCATGCTaGTGCTGCTGCCACCCTGCAGGCCCTCCAAGGACGTGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGRTARHQENAGCPC*CCCHPAGPPRTCQP Trigger: CGGCTGGCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | CAGCAGGCCAGCACGGCTACCACCATGGCAGTTGTGGTCCGGCCCTaGCCACTGAGGCAGCTGAAGACAAAGCCTGTGCCCGGGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QQASTATTMAVVVRP*PLRQLKTKPVPGSL Trigger: CAAGGACCCGGGCACAGGCTTTGTCTTCAGCTGCCTCAGTGGCCAGGGCCGGACCACAACTGCCATGGTGGTAGCCGTGCTGGCCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | GGAAGGACTGCACGCCACCAAGAGAATGCTGGCTGTCCATGCTGCTaGTGCTGCCACCCTGCAGGCCCTCCAAGGACGTGCCAGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRTARHQENAGCPCC*CCHPAGPPRTCQPR Trigger: TCTCGGCTGGCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | AGGCTGGGCTGTCCCATGCCAAACACAGGGAGGCCTCCCCGCACCTaGCGGAAGTTGGGAGCCCCACAGCTCTTCAAGGTGCCCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: RLGCPMPNTGRPPRT*RKLGAPQLFKVPSM Trigger: CATACTGGGCACCTTGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCTCCCTGTGTTTGGCATGGGACAGCCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | CCACCAAGAGAATGCTGGCTGTCCATGCTGCTGCTGCTGCCACCCTaGAGGCCCTCCAAGGACGTGCCAGCCGAGACTGTCTGCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PPRECWLSMLLLLPP*RPSKDVPAETVCCA Trigger: AGCACAGCAGACAGTCTCGGCTGGCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | ACTGCACGCCACCAAGAGAATGCTGGCTGTCCATGCTGCTGCTGCTaGCACCCTGCAGGCCCTCCAAGGACGTGCCAGCCGAGACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TARHQENAGCPCCCC*HPAGPPRTCQPRLS Trigger: AGACAGTCTCGGCTGGCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | TGCTCCATGGGCAGGGGTTTGGCCAACGGGGAGGCTGCCTCTAGCTaGGAGGTGGTCCTACTGTGGTGGAACATGACGAGGGTTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: CSMGRGLANGEAASS*EVVLLWWNMTRVPR Trigger: CCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCCCGTTGGCCAAACCCCTGCCCATGGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | TGCCTAGCAAGGGGCAAGAAGAAGGCCTATAGGAAGTCCCCAGCATCACAGGGCTCCATGGGCAGGGGTTaGGCCAACGGGGAGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: CLARGKKKAYRKSPASQGSMGRG*ANGEAA Trigger: GGCAGCCTCCCCGTTGGCCAAACCCCTGCCCATGGA...GCCCTGTGATGCTGGGGACTTCCTATAGGCCTTCTTCTTGCCCCTTGCTAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | GCTCGGGGGTGGCATCCGAGAGCCGGCCCATCCTGTAATGGGCCTTaGGCAGCTCATCGTGGATCTGGAACTCCTCCTTGCAGTTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: ARGWHPRAGPSCNGP*AAHRGSGTPPCSCT Trigger: CGTACAACTGCAAGGAGGAGTTCCAGATCCACGATGAGCTGCTCAAGGCCCATTACAGGATGGGCCGGCTCTCGGATGCCACCCCCGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | GTCCCATGCCAAACACAGGGAGGCCTCCCCGCACCTGCCGGAAGTTaGGAGCCCCACAGCTCTTCAAGGTGCCCAGTATGTCCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VPCQTQGGLPAPAGS*EPHSSSRCPVCPSS Trigger: AGAAGATGGACATACTGGGCACCTTGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCTCCCTGTGTTTGGCATGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | GCCAACGGGGAGGCTGCCTCTAGCTGGGAGGTGGTCCTACTGTGGTaGAACATGACGAGGGTTCCCAGGACCATGCCTAGGTTGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANGEAASSWEVVLLW*NMTRVPRTMPRLVL Trigger: CAGAACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCCCGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | GACGGGGAGGAGAGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCACAACAGGGGCCACCTaGTTGGGGATGATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGEERGEPFPQSSRPVTLTTGAT*LGMMDL Trigger: CAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGT...GAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCTCTCCTCCCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | GGGAGGCTGCCTCTAGCTGGGAGGTGGTCCTACTGTGGTGGAACATaGCGAGGGTTCCCAGGACCATGCCTAGGTTGGTTCTGCCTACAC | + |
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Preference number: 5 (lower is better) Translates to: GRLPLAGRWSYCGGT*RGFPGPCLGWFCLH Trigger: GTGTAGGCAGAACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | AAGTACAGCTCCAGGCTCCACAGCGCCCTCTGCTGGACAGCTTGCTaGCTACCACATTCCTGTCCCCGGCTCTCTGGCCTGAAGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: KYSSRLHSALCWTAC*LPHSCPRLSGLKLS Trigger: GGAAAGCTTCAGGCCAGAGAGCCGGGGACAGGAATGTGGTAGTCAGCAAGCTGTCCAGCAGAGGGCGCTGTGGAGCCTGGAGCTGTACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | CATCCAGGGACACAAGATCATCTGCTTCCAGGGAGCCCTTGGCGATaGGGTCCCCAGGGACCAAGGGCCCCACTGAATTCAGCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HPGTQDHLLPGSPWR*GPQGPRAPLNSAPP Trigger: TGGTGGAGCTGAATTCAGTGGGGCCCTTGGTCCCTGGGGACCTCATCGCCAAGGGCTCCCTGGAAGCAGATGATCTTGTGTCCCTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | TTGTGTAAACTTGTGGCACGGAAGGACTGCACGCCACCAAGAGAATaGTGGCTGTCCATGCTGCTGCTGCTGCCACCCTGCAGGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LCKLVARKDCTPPRE*WLSMLLLLPPCRPS Trigger: GGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCCGTGCCACAAGTTTACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | TTGGCCAACGGGGAGGCTGCCTCTAGCTGGGAGGTGGTCCTACTGTaGTGGAACATGACGAGGGTTCCCAGGACCATGCCTAGGTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LANGEAASSWEVVLL*WNMTRVPRTMPRLV Trigger: AACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCCCGTTGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | GGCCCCACTGAATTCAGCTCCACCAGCAGACGGTACAGCTCAGGATaGGTACACAGCCATCGACTGAAACTGAGGGCAAAGGCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPTEFSSTSRRYSSG*VHSHRLKLRAKARG Trigger: CCCCCTGGCCTTTGCCCTCAGTTTCAGTCGATGGCTGTGTACCCATCCTGAGCTGTACCGTCTGCTGGTGGAGCTGAATTCAGTGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | AGAATTCAGCTAAGAGGGTCACCACTCTCCCCAGGCTGGGAACAACTTTGGCCTGCTTCCAGGGAGCCCTaGGCGATGAGGTCCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RIQLRGSPLSPGWEQLWPASREP*AMRSPG Trigger: CCCTGGGGACCTCATCGCCAAGGGCTCCCTGGAAGC...AGGCCAAAGTTGTTCCCAGCCTGGGGAGAGTGGTGACCCTCTTAGCTGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACGTAGGGCTCTTGGTGTaGGGGACAGGTGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQPQECEGSLWPLTHWLDVGLLV*GTGALR Trigger: CCTGAGCGCACCTGTCCCCAACACCAAGAGCCCTAC...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | GCTGCCTGGGATGAAAGACTGAGAGACAAGAGCAAGCCAGTCAGAGGAAGGAAGGGGGCAGTAGGGCTCTaGGTGTTGGGGACAGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAWDERLRDKSKPVRGRKGAVGL*VLGTGA Trigger: CGCACCTGTCCCCAACACCAAGAGCCCTACTGCCCC...CTTCCTTCCTCTGACTGGCTTGCTCTTGTCTCTCAGTCTTTCATCCCAGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | ACTCTCCCCAGGCTGGGAACAACTTTGGCCTCTTCAAATAGCACAGCTGGCATCCTACCACCATGGCAGTaGTGGTCCGGCCCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLPRLGTTLASSNSTAGILPPWQ*WSGPGH Trigger: GTGGCCAGGGCCGGACCACAACTGCCATGGTGGTAG...GATGCCAGCTGTGCTATTTGAAGAGGCCAAAGTTGTTCCCAGCCTGGGGAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | TCTCATAGATGCCAGCTTTGGTTGCCACCTCCCGCATCCAGGTGCTaGAAGGCCTCTGCCAGGAGCTGGTCTTCTCCAAGCGAAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRCQLWLPPPASRC*KASARSWSSPSEGR Trigger: CCTACCTTCGCTTGGAGAAGACCAGCTCCTGGCAGAGGCCTTTCAGCACCTGGATGCGGGAGGTGGCAACCAAAGCTGGCATCTATGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | ACGCAGAAGATAATGCACTCCTTGAGTCCGTCCGTCTGGAGTTTCTaGAGGACCCTCCTGAACCCCAAGAGGCTGGGCTGTCCCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQKIMHSLSPSVWSF*RTLLNPKRLGCPMP Trigger: TGGCATGGGACAGCCCAGCCTCTTGGGGTTCAGGAGGGTCCTGCAGAAACTCCAGACGGACGGACTCAAGGAGTGCATTATCTTCTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | CAGCCTGCTGTCCACTCAGGCAGTCTGACGACCAACAGTGAAGAGGGGACAGAGCCTCTGCTGGACAGCTaGCTGACTACCACATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPAVHSGSLTTNSEEGTEPLLDS*LTTTFL Trigger: CAGGAATGTGGTAGTCAGCAAGCTGTCCAGCAGAGG...CTCTGTCCCCTCTTCACTGTTGGTCGTCAGACTGCCTGAGTGGACAGCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | TGCCAACCACAAGAGTGTGAAGGGTCTCTCTGGCCTCTGACTCACTGGCTAGACGGTACACGCCGGAAGTaGGCCACGTCCATCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQPQECEGSLWPLTHWLDGTRRK*ATSISL Trigger: CAGAGAGATGGACGTGGCCAACTTCCGGCGTGTACC...GTCTAGCCAGTGAGTCAGAGGCCAGAGAGACCCTTCACACTCTTGTGGTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | TGTGCGTGTGACCGTCACACTCTAACACAACCTCCTCCCTCAGGTTaGTCCAGACCACCTGCCGAAGCTTCCTCTTGGCGTCAGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CACDRHTLTQPPPSG*SRPPAEASSWRQTG Trigger: ACCTGTCTGACGCCAAGAGGAAGCTTCGGCAGGTGGTCTGGATCAACCTGAGGGAGGAGGTTGTGTTAGAGTGTGACGGTCACACGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | CGGATGGCCACGGTGTGCGGCTCCCCGCGCAGGTCCTCTGTGTTGTaGTATACGTGGTACACATTATCTCTCAATTGGGCAAAGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RMATVCGSPRRSSVL*YTWYTLSLNWAKSW Trigger: CCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCTGCGCGGGGAGCCGCACACCGTGGCCATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | GACGGGGAGGAGAGAGGGGAGCCATTCCCTCAGTCTTCCAGGCCGGTGACACTCATGATGGACTTGGCCTaGCTGTTGTGTAAACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DGEERGEPFPQSSRPVTLMMDLA*LLCKLV Trigger: CACAAGTTTACACAACAGCAAGGCCAAGTCCATCAT...GAGTGTCACCGGCCTGGAAGACTGAGGGAATGGCTCCCCTCTCTCCTCCCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | TGGCAAACTTCAGTCCCAGCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTAGGACCATGCCTAGGTaGGTTCTGCCTACACCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WQTSVPAETQPNTALSAPRTMPR*VLPTPD Trigger: GTCAGGTGTAGGCAGAACCAACCTAGGCATGGTCCT...AGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGCTGGGACTGAAGTTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 90 bp | GAGCCCCACAGCTCTTCAAGGTGCCCAGTATGTCCATCTTCTCGGTaGTGTCACGCACCAAGAAATAGCGACCCTGCACCAGGTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EPHSSSRCPVCPSSR*CHAPRNSDPAPGSA Trigger: AGCACTACCTGGTGCAGGGTCGCTATTTCTTGGTGCGTGACATCACCGAGAAGATGGACATACTGGGCACCTTGAAGAGCTGTGGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | ATGGACTTGGCCTTGCTGTTGTGTAAACTTGTGGCACGGAAGGACTaGACGCCACCAAGAGAATGCTGGCTGTCCATGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MDLALLLCKLVARKD*TPPRECWLSMLLLL Trigger: CAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCCGTGCCACAAGTTTACACAACAGCAAGGCCAAGTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 90 bp | CCGCAGCTGCAACCTCTGAGCTTCCTGTGCCTCTTTGGTAGCCTTTaGCTGTCGGTAGGTGGATATGATGATCTCCCGAAGGTGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQLQPLSFLCLFGSL*LSVGGYDDLPKVVV Trigger: CACTACCACCTTCGGGAGATCATCATATCCACCTACCGACAGGCAAAGGCTACCAAAGAGGCACAGGAAGCTCAGAGGTTGCAGCTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | GATCTCTTTCTGGATGGCCAGCTCCAGATTCTCAGCCTTGACCCCTaGACTAGGGTCCCTGAGGTTCTCATGAAGGCTCTCCTTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DLFLDGQLQILSLDP*TRVPEVLMKALLVS Trigger: CGAGACAAGGAGAGCCTTCATGAGAACCTCAGGGACCCTAGTCCAGGGGTCAAGGCTGAGAATCTGGAGCTGGCCATCCAGAAAGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | AGGAAGGAAGTGAAAATACAAACGCGACCAGCCTGCTGTCCACTCAGGCAGTCTTCGCCTTTGGTGAACTaGGCATCAGGCACGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RKEVKIQTRPACCPLRQSSPLVN*ASGTLT Trigger: AGTGAGCGTGCCTGATGCCAAGTTCACCAAAGGCGA...AGACTGCCTGAGTGGACAGCAGGCTGGTCGCGTTTGTATTTTCACTTCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCGCTTCCTGTGCCTCTTaGGTAGCCTTTGCCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLNQTQPSLPLFPLCVISASCAS*VAFACR Trigger: CCGACAGGCAAAGGCTACCAAAGAGGCACAGGAAGC...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | ACGGTGTGCGGCTCCCCGCGCAGGTCCTCTGTGTTGTGGTATACGTaGTACACATTATCTCTCAATTGGGCAAAGTCATGGATCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVCGSPRRSSVLWYT*YTLSLNWAKSWISF Trigger: GAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCTGCGCGGGGAGCCGCACACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | AGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATAAGCGACTTGGCCTTGCTGTaGTGTAAACTTGTGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RLNQTQPSLPLFPLCVISDLALL*CKLVAR Trigger: CCGTGCCACAAGTTTACACAACAGCAAGGCCAAGTC...GCTTATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS-3UTR CAA 90 bp | GCCGAGACTCAACCAAACACAGCCCTCTCTGCCCCTCTTCCCATTGTGTGTAATATCTGGAACTCCTCCTaGCAGTTGTACGTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: AETQPNTALSAPLPIVCNIWNSS*QLYVIT Trigger: TGTGATCACGTACAACTGCAAGGAGGAGTTCCAGAT...ATTACACACAATGGGAAGAGGGGCAGAGAGGGCTGTGTTTGGTTGAGTCTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | TGGTACACATTATCTCTCAATTGGGCAAAGTCATGGATCTCTTTCTaGATGGCCAGCTCCAGATTCTCAGCCTTGACCCCTGGACTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WYTLSLNWAKSWISF*MASSRFSALTPGLG Trigger: CCCTAGTCCAGGGGTCAAGGCTGAGAATCTGGAGCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | TTGTGGTATACGTGGTACACATTATCTCTCAATTGGGCAAAGTCATaGATCTCTTTCTGGATGGCCAGCTCCAGATTCTCAGCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LWYTWYTLSLNWAKS*ISFWMASSRFSALT Trigger: GGTCAAGGCTGAGAATCTGGAGCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 90 bp | AGGTCCTCTGTGTTGTGGTATACGTGGTACACATTATCTCTCAATTaGGCAAAGTCATGGATCTCTTTCTGGATGGCCAGCTCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSVLWYTWYTLSLN*AKSWISFWMASSRF Trigger: GAATCTGGAGCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GGCCTCCAGAGCCTCCAGATGCTCAGGGGCCAGGGCTaGTCCGGGAGGCCACAAGCTGTGCGTGTGACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLQSLQMLRGQG*SGRPQAVRVTV Trigger: GACGGTCACACGCACAGCTTGTGGCCTCCCGGACCAGCCCTGGCCCCTGAGCATCTGGAGGCTCTGGAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | CGCCACCAAGAGAATGCTGGCTGTCCATGCTGCTGCTaGTGCCACCCTGCAGGCCCTCCAAGGACGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHQENAGCPCCC*CHPAGPPRTCQ Trigger: CTGGCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | GCACGCCACCAAGAGAATGCTGGCTGTCCATGCTGCTaGTGCTGCCACCCTGCAGGCCCTCCAAGGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARHQENAGCPCC*CCHPAGPPRTC Trigger: GCACGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | CTGAGGCAGCTGAAGACAAAGCCTGTGCCCGGGTCCTaGGTGAGAGCAGCTCGCAGGGCCTCAAGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LRQLKTKPVPGS*VRAARRASSSR Trigger: CCGGCTGCTTGAGGCCCTGCGAGCTGCTCTCACCAAGGACCCGGGCACAGGCTTTGTCTTCAGCTGCCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | GTGGTCAGGCACTTCTGGAACCTGGGGGCAGTAGGGCTCTTGGTGTaGGGGACAGGTGCGCTCAGGTGGGCCTTCAGCTGGGCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VVRHFWNLGAVGLLV*GTGALRWAFSWASR Trigger: TCTGGAGGCCCAGCTGAAGGCCCACCTGAGCGCACCTGTCCCCAACACCAAGAGCCCTACTGCCCCCAGGTTCCAGAAGTGCCTGACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | CCCTGGCCACTGAGGCAGCTGAAGACAAAGCCTGTGCCCGGGTCCTaGGTGAGAGCAGCTCGCAGGGCCTCAAGCAGCCGGTCAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PWPLRQLKTKPVPGS*VRAARRASSSRSKS Trigger: GGACTTTGACCGGCTGCTTGAGGCCCTGCGAGCTGCTCTCACCAAGGACCCGGGCACAGGCTTTGTCTTCAGCTGCCTCAGTGGCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | GCCAGGGCTGGTCCGGGAGGCCACAAGCTGTGCGTGTaGCCGTCACACTCTAACACAACCTCCTCCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARAGPGGHKLCV*PSHSNTTSSLR Trigger: CCTGAGGGAGGAGGTTGTGTTAGAGTGTGACGGTCACACGCACAGCTTGTGGCCTCCCGGACCAGCCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | ACTGCACGCCACCAAGAGAATGCTGGCTGTCCATGCTaGTGCTGCTGCCACCCTGCAGGCCCTCCAAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: TARHQENAGCPC*CCCHPAGPPRT Trigger: CGTCCTTGGAGGGCCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | TGTCCCATGCCAAACACAGGGAGGCCTCCCCGCACCTaGCGGAAGTTGGGAGCCCCACAGCTCTTCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPMPNTGRPPRT*RKLGAPQLFKV Trigger: CACCTTGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCTCCCTGTGTTTGGCATGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GTGGCACGGAAGGACTGCACGCCACCAAGAGAATGCTaGCTGTCCATGCTGCTGCTGCTGCCACCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VARKDCTPPREC*LSMLLLLPPCR Trigger: CCTGCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCCGTGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GGCAGGGGTTTGGCCAACGGGGAGGCTGCCTCTAGCTaGGAGGTGGTCCTACTGTGGTGGAACATGACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGLANGEAASS*EVVLLWWNMTR Trigger: CCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCCCGTTGGCCAAACCCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | CACTTCTGGAACCTGGGGGCAGTAGGGCTCTTGGTGTaGGGGACAGGTGCGCTCAGGTGGGCCTTCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HFWNLGAVGLLV*GTGALRWAFSW Trigger: CCAGCTGAAGGCCCACCTGAGCGCACCTGTCCCCAACACCAAGAGCCCTACTGCCCCCAGGTTCCAGAAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | GTCAGGCACTTCTGGAACCTGGGGGCAGTAGGGCTCTaGGTGTTGGGGACAGGTGCGCTCAGGTGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRHFWNLGAVGL*VLGTGALRWAF Trigger: GAAGGCCCACCTGAGCGCACCTGTCCCCAACACCAAGAGCCCTACTGCCCCCAGGTTCCAGAAGTGCCTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | CTTGTGGCACGGAAGGACTGCACGCCACCAAGAGAATaGTGGCTGTCCATGCTGCTGCTGCTGCCACCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVARKDCTPPRE*WLSMLLLLPPC Trigger: GCAGGGTGGCAGCAGCAGCAGCATGGACAGCCAGCATTCTCTTGGTGGCGTGCAGTCCTTCCGTGCCACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | CAAACACAGGGAGGCCTCCCCGCACCTGCCGGAAGTTaGGAGCCCCACAGCTCTTCAAGGTGCCCAGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: QTQGGLPAPAGS*EPHSSSRCPVC Trigger: ACATACTGGGCACCTTGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCTCCCTGTGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GGGGAGGCTGCCTCTAGCTGGGAGGTGGTCCTACTGTaGTGGAACATGACGAGGGTTCCCAGGACCATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GEAASSWEVVLL*WNMTRVPRTMP Trigger: AGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | TCCAGGGACACAAGATCATCTGCTTCCAGGGAGCCCTaGGCGATGAGGTCCCCAGGGACCAAGGGCCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SRDTRSSASREP*AMRSPGTKGPT Trigger: AGTGGGGCCCTTGGTCCCTGGGGACCTCATCGCCAAGGGCTCCCTGGAAGCAGATGATCTTGTGTCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | TGTCCCATGCCAAACACAGGGAGGCCTCCCCGCACCTGCCGGAAGTaGGGAGCCCCACAGCTCTTCAAGGTGCCCAGTATGTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPMPNTGRPPRTCRK*GAPQLFKVPSMSIF Trigger: GAAGATGGACATACTGGGCACCTTGAAGAGCTGTGGGGCTCCCAACTTCCGGCAGGTGCGGGGAGGCCTCCCTGTGTTTGGCATGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | TGCCAGCTTTGGTTGCCACCTCCCGCATCCAGGTGCTaGAAGGCCTCTGCCAGGAGCTGGTCTTCTCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CQLWLPPPASRC*KASARSWSSPS Trigger: GCTTGGAGAAGACCAGCTCCTGGCAGAGGCCTTTCAGCACCTGGATGCGGGAGGTGGCAACCAAAGCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GAGGCTGCCTCTAGCTGGGAGGTGGTCCTACTGTGGTaGAACATGACGAGGGTTCCCAGGACCATGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: EAASSWEVVLLW*NMTRVPRTMPR Trigger: CCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGGCAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | TGCTGGCTGAAGACCTCCTGTGTGGTCAGGCACTTCTaGAACCTGGGGGCAGTAGGGCTCTTGGTGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CWLKTSCVVRHF*NLGAVGLLVLG Trigger: CCCCAACACCAAGAGCCCTACTGCCCCCAGGTTCCAGAAGTGCCTGACCACACAGGAGGTCTTCAGCCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | ATGTCCAACGCCGCATCCACCTCCTTCTTCACGTGGTaGCCGTCGGGCAGCAGCTGTACCACCTTCATCACC | + |
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Preference number: 6 (lower is better) Translates to: MSNAASTSFFTW*PSGSSCTTFIT Trigger: GGTGATGAAGGTGGTACAGCTGCTGCCCGACGGCCACCACGTGAAGAAGGAGGTGGATGCGGCGTTGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | TGGCATCCGAGAGCCGGCCCATCCTGTAATGGGCCTTaGGCAGCTCATCGTGGATCTGGAACTCCTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: WHPRAGPSCNGP*AAHRGSGTPPC Trigger: GCAAGGAGGAGTTCCAGATCCACGATGAGCTGCTCAAGGCCCATTACAGGATGGGCCGGCTCTCGGATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | GACGGTGCTAAGTGCATCCAGGGACACAAGATCATCTaGTTCCAGGGAGCCCTTGGCGATGAGGTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DGAKCIQGHKII*FQGALGDEVPR Trigger: CCTGGGGACCTCATCGCCAAGGGCTCCCTGGAAGCAGATGATCTTGTGTCCCTGGATGCACTTAGCACCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | CTGCAGGCTCCGCAGCTGCAACCTCTGAGCTTCCTGTaGCTCTTTGGTAGCCTTTGCCTGTCGGTAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LQAPQLQPLSFL*LFGSLCLSVGG Trigger: TCCACCTACCGACAGGCAAAGGCTACCAAAGAGGCACAGGAAGCTCAGAGGTTGCAGCTGCGGAGCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | ACAATGTCCAACGCCGCATCCACCTCCTTCTTCACGTaGTGGCCGTCGGGCAGCAGCTGTACCACCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TMSNAASTSFFT*WPSGSSCTTFI Trigger: GATGAAGGTGGTACAGCTGCTGCCCGACGGCCACCACGTGAAGAAGGAGGTGGATGCGGCGTTGGACATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | CTACTGTGGTGGAACATGACGAGGGTTCCCAGGACCATGCCTAGGTaGGTTCTGCCTACACCTGACTGGCAGCTGAACAGGAGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLWWNMTRVPRTMPR*VLPTPDWQLNRRAG Trigger: GCCTGCCCTCCTGTTCAGCTGCCAGTCAGGTGTAGGCAGAACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | CCTCTAGCTGGGAGGTGGTCCTACTGTGGTGGAACATaGCGAGGGTTCCCAGGACCATGCCTAGGTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLAGRWSYCGGT*RGFPGPCLGWF Trigger: GAACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCACCACAGTAGGACCACCTCCCAGCTAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | ACACAAGATCATCTGCTTCCAGGGAGCCCTTGGCGATaGGGTCCCCAGGGACCAAGGGCCCCACTGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: TQDHLLPGSPWR*GPQGPRAPLNS Trigger: TGAATTCAGTGGGGCCCTTGGTCCCTGGGGACCTCATCGCCAAGGGCTCCCTGGAAGCAGATGATCTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | CTGGATGGCCAGCTCCAGATTCTCAGCCTTGACCCCTaGACTAGGGTCCCTGAGGTTCTCATGAAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDGQLQILSLDP*TRVPEVLMKAL Trigger: GAGAGCCTTCATGAGAACCTCAGGGACCCTAGTCCAGGGGTCAAGGCTGAGAATCTGGAGCTGGCCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | CCTCGGATGGCCACGGTGTGCGGCTCCCCGCGCAGGTCCTCTGTGTaGTGGTATACGTGGTACACATTATCTCTCAATTGGGCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRMATVCGSPRRSSV*WYTWYTLSLNWAKS Trigger: TGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCTGCGCGGGGAGCCGCACACCGTGGCCATCCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | GACCGTCACACTCTAACACAACCTCCTCCCTCAGGTTaGTCCAGACCACCTGCCGAAGCTTCCTCTTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: DRHTLTQPPPSG*SRPPAEASSWR Trigger: ACGCCAAGAGGAAGCTTCGGCAGGTGGTCTGGATCAACCTGAGGGAGGAGGTTGTGTTAGAGTGTGACGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | TGGAACATGACGAGGGTTCCCAGGACCATGCCTAGGTaGGTTCTGCCTACACCTGACTGGCAGCTGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: WNMTRVPRTMPR*VLPTPDWQLNR Trigger: CCTGTTCAGCTGCCAGTCAGGTGTAGGCAGAACCAACCTAGGCATGGTCCTGGGAACCCTCGTCATGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | GTGATCACAACAGGGGCCACCTTGTTGGGGATGATGGACTTGGCCTaGCTGTTGTGTAAACTTGTGGCACGGAAGGACTGCACGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VITTGATLLGMMDLA*LLCKLVARKDCTPP Trigger: TGGTGGCGTGCAGTCCTTCCGTGCCACAAGTTTACACAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | CCTCCTCCTTCAGGTCATGCAACTCTGCACAGGCACTaGTCGCTCGATCCACCTCCTCCACCATTTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPSGHATLHRH*SLDPPPPPFSS Trigger: GGAAGAAAATGGTGGAGGAGGTGGATCGAGCGATCAGTGCCTGTGCAGAGTTGCATGACCTGAAGGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | ACGCAGAAGATAATGCACTCCTTGAGTCCGTCCGTCTaGAGTTTCTGCAGGACCCTCCTGAACCCCAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TQKIMHSLSPSV*SFCRTLLNPKR Trigger: CCTCTTGGGGTTCAGGAGGGTCCTGCAGAAACTCCAGACGGACGGACTCAAGGAGTGCATTATCTTCTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | ACAGGGGCCACCTTGTTGGGGATGATGGACTTGGCCTaGCTGTTGTGTAAACTTGTGGCACGGAAGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGATLLGMMDLA*LLCKLVARKDC Trigger: GCAGTCCTTCCGTGCCACAAGTTTACACAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | CCTCCACCATTTTCTTCCCCTGTGGCACCTTACAGATaGAGCCCTGGATCACCTGAAACTGCTCCATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPFSSPVAPYR*SPGSPETAPWA Trigger: TGCCCATGGAGCAGTTTCAGGTGATCCAGGGCTTCATCTGTAAGGTGCCACAGGGGAAGAAAATGGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | GTACCACCTTCATCACCACCTGAAACTCGCCTTTGGTaGACTTGGCATCAGGCACGCTCACTAGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPPSSPPETRLW*TWHQARSLAPP Trigger: AGGAGGAGCTAGTGAGCGTGCCTGATGCCAAGTTCACCAAAGGCGAGTTTCAGGTGGTGATGAAGGTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | CGCTCGATCCACCTCCTCCACCATTTTCTTCCCCTGTaGCACCTTACAGATGAAGCCCTGGATCACCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSIHLLHHFLPL*HLTDEALDHLK Trigger: TTTCAGGTGATCCAGGGCTTCATCTGTAAGGTGCCACAGGGGAAGAAAATGGTGGAGGAGGTGGATCGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS TCA 72 bp | AGCTCTTCAAGGTGCCCAGTATGTCCATCTTCTCGGTaGTGTCACGCACCAAGAAATAGCGACCCTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRCPVCPSSR*CHAPRNSDPAP Trigger: TGGTGCAGGGTCGCTATTTCTTGGTGCGTGACATCACCGAGAAGATGGACATACTGGGCACCTTGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS GCA 72 bp | CAACCTCTGAGCTTCCTGTGCCTCTTTGGTAGCCTTTaGCTGTCGGTAGGTGGATATGATGATCTCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPLSFLCLFGSL*LSVGGYDDLPK Trigger: CTTCGGGAGATCATCATATCCACCTACCGACAGGCAAAGGCTACCAAAGAGGCACAGGAAGCTCAGAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GGCTCCCCGCGCAGGTCCTCTGTGTTGTGGTATACGTaGTACACATTATCTCTCAATTGGGCAAAGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPRRSSVLWYT*YTLSLNWAKSW Trigger: CCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCTGCGCGGGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | AACTCCTCCTTGCAGTTGTACGTGATCACAACAGGGGCCACCTTGTaGGGGATGATGGACTTGGCCTTGCTGTTGTGTAAACTTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NSSLQLYVITTGATL*GMMDLALLLCKLVA Trigger: TGCCACAAGTTTACACAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGGAGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 72 bp | TTGCAGTTGTACGTGATCACAACAGGGGCCACCTTGTaGGGGATGATGGACTTGGCCTTGCTGTTGTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQLYVITTGATL*GMMDLALLLCK Trigger: TTTACACAACAGCAAGGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CAA 90 bp | CAGGTCCTCTGTGTTGTGGTATACGTGGTACACATTATCTCTCAATaGGGCAAAGTCATGGATCTCTTTCTGGATGGCCAGCTCCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: QVLCVVVYVVHIISQ*GKVMDLFLDGQLQI Trigger: AATCTGGAGCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACACAGAGGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | ACGTGGTACACATTATCTCTCAATTGGGCAAAGTCATaGATCTCTTTCTGGATGGCCAGCTCCAGATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TWYTLSLNWAKS*ISFWMASSRFS Trigger: TGAGAATCTGGAGCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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| CDS CCA 72 bp | GTGTTGTGGTATACGTGGTACACATTATCTCTCAATTaGGCAAAGTCATGGATCTCTTTCTGGATGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLWYTWYTLSLN*AKSWISFWMAS Trigger: GCTGGCCATCCAGAAAGAGATCCATGACTTTGCCCAATTGAGAGATAATGTGTACCACGTATACCACAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020289.10 |
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