Pregenerated sensors for PALB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044702Ensembl transcript IDs: ENSMUST00000063587.13, ENSMUST00000098068.10, ENSMUST00000106468.7, ENSMUST00000106469.8, ENSMUST00000131657.8, ENSMUST00000142952.8
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGGCTGCCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTCCTaGTGGAACAGTGAGCTCCTCTTCCAAGCCCTCCGTCTCCGAATC | + |
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Preference number: 1 (lower is better) Translates to: PWLPSQGWPWTVRFS*WNSELLFQALRLRI Trigger: GATTCGGAGACGGAGGGCTTGGAAGAGGAGCTCACTGTTCCACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | GCAGGTCCTGGAGGAGAGCTGACCTCAGCTGGTGAGAGCAGTTTCTaGGAGAGGCTTCCTGAACTGGACTGTCCCGTGCTCGTGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: AGPGGELTSAGESSF*ERLPELDCPVLVSS Trigger: GCTGGACACGAGCACGGGACAGTCCAGTTCAGGAAGCCTCTCTCAGAAACTGCTCTCACCAGCTGAGGTCAGCTCTCCTCCAGGACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | CAGGTGGCGGTGTGGTGGCCTTTCCAGCAGGTCCTGGAGGAGAGCTaGCCTCAGCTGGTGAGAGCAGTTTCTGAGAGAGGCTTCCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: QVAVWWPFQQVLEES*PQLVRAVSERGFLN Trigger: GTTCAGGAAGCCTCTCTCAGAAACTGCTCTCACCAGCTGAGGTCAGCTCTCCTCCAGGACCTGCTGGAAAGGCCACCACACCGCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | GAGAGAGGCTTCCTGAACTGGACTGTCCCGTGCTCGTGTCCAGCATaGCACTTTCACTCTGGTCAGTGTCTTCACTGGAGAGGACGACCG | + |
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Preference number: 1 (lower is better) Translates to: ERGFLNWTVPCSCPA*HFHSGQCLHWRGRP Trigger: CGGTCGTCCTCTCCAGTGAAGACACTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGACAGTCCAGTTCAGGAAGCCTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CCA 90 bp | CCAGTGCGGCACAAGGAGGAAAAAGCAGCTGGCAGTGACCCAGTGTaGAGGTGCGGGCTGATTTTCGTTTCCCTCTGTGTCCTCTACCAG | + |
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Preference number: 1 (lower is better) Translates to: PVRHKEEKAAGSDPV*RCGLIFVSLCVLYQ Trigger: CTGGTAGAGGACACAGAGGGAAACGAAAATCAGCCCGCACCTCCACACTGGGTCACTGCCAGCTGCTTTTTCCTCCTTGTGCCGCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | GGAGTGAAAAGCACTATGGATGAAGAAAGGTCCTTGCTCCCTGGCTaGCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTCCTGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GVKSTMDEERSLLPG*LLRVGPGRYASPGG Trigger: TCCACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCATCCATAGTGCTTTTCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | CCAGAGTCACTGTCACAGGCAGGTTGTCCTTGCCTACCTGACGCTTaGAGGTTGGTGTCCGGTTTTGGTGAGCAGGCTGAACTGTTGCAC | + |
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Preference number: 1 (lower is better) Translates to: PESLSQAGCPCLPDA*RLVSGFGEQAELLH Trigger: GTGCAACAGTTCAGCCTGCTCACCAAAACCGGACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAACCTGCCTGTGACAGTGACTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CCA 90 bp | AGAACACCCACACTCTGGGCCGTCTTAGGGTTAATCACCAGCAGCTaGAACACAGGGCTTCCAAGGGCCTGGCTCTCTTTGGCACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RTPTLWAVLGLITSS*NTGLPRAWLSLAQG Trigger: ACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCCTGTGTTCCAGCTGCTGGTGATTAACCCTAAGACGGCCCAGAGTGTGGGTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR CCA 90 bp | TCACCAGCAGCTGGAACACAGGGCTTCCAAGGGCCTGGCTCTCTTTaGCACAAGGTTGACTCACAACAACAAACAGGAGCCCCTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SPAAGTQGFQGPGSL*HKVDSQQQTGAPSQ Trigger: CTGAGAAGGGGCTCCTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCCTGTGTTCCAGCTGCTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR CCA 90 bp | GAGCAAGGCTGTGCAGCTTCAGTAGATAGAGTCTCACCGGCTGCTTaGGAGCCAAGAGCTGGAGTCATGCCTAAGATGGGGAAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: EQGCAASVDRVSPAA*EPRAGVMPKMGKAG Trigger: ACCTGCTTTCCCCATCTTAGGCATGACTCCAGCTCTTGGCTCCCAAGCAGCCGGTGAGACTCTATCTACTGAAGCTGCACAGCCTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | GTGAGAGCAGTTTCTGAGAGAGGCTTCCTGAACTGGACTGTCCCGTaGTCGTGTCCAGCATGCCACTTTCACTCTGGTCAGTGTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: VRAVSERGFLNWTVP*SCPACHFHSGQCLH Trigger: GTGAAGACACTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGACAGTCCAGTTCAGGAAGCCTCTCTCAGAAACTGCTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | GGAACAGTGAGCTCCTCTTCCAAGCCCTCCGTCTCCGAATCTCTTTaGAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCTAGGAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GTVSSSSKPSVSESL*SSSRAAWFPSLGSL Trigger: GAGGCTTCCTAGAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGGGCTTGGAAGAGGAGCTCACTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CCA 90 bp | CACTGTCACAGGCAGGTTGTCCTTGCCTACCTGACGCTTGCAGGTTaGTGTCCGGTTTTGGTGAGCAGGCTGAACTGTTGCACTGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: HCHRQVVLAYLTLAG*CPVLVSRLNCCTVY Trigger: GTAAACAGTGCAACAGTTCAGCCTGCTCACCAAAACCGGACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAACCTGCCTGTGACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | CCCACGGCGTCTTTGTTGTCCCCGGAAGCGTGTTCTGCTCTTTCTTaGCATCAGGGCTGCTGGTGCTATGCAAAAGTTGTCCTTGAATGT | + |
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Preference number: 1 (lower is better) Translates to: PTASLLSPEACSALS*HQGCWCYAKVVLEC Trigger: ACATTCAAGGACAACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGGGACAACAAAGACGCCGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CCA 90 bp | TGTACCCGACCATTTAACCAAAGACCAACTCTGGTCAGAGACAGGTaGGAGGAGAGCCGTGCAGTGACCCAGAAGCAAATCCCAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: CTRPFNQRPTLVRDR*EESRAVTQKQIPNG Trigger: GCCATTTGGGATTTGCTTCTGGGTCACTGCACGGCTCTCCTCCCACCTGTCTCTGACCAGAGTTGGTCTTTGGTTAAATGGTCGGGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR GCA 90 bp | AAGCAAATCCCAAATGGCAATTGTCCCAGAAGTCAGGACTGCTGCTaGGACATGATCTTTCACATCCCCTTCCAGGAACCTTCCAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KQIPNGNCPRSQDCC*DMIFHIPFQEPSSL Trigger: CAGGCTGGAAGGTTCCTGGAAGGGGATGTGAAAGATCATGTCGCAGCAGCAGTCCTGACTTCTGGGACAATTGCCATTTGGGATTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR GCA 90 bp | CAGAAGCAAATCCCAAATGGCAATTGTCCCAGAAGTCAGGACTGCTaGTGCGACATGATCTTTCACATCCCCTTCCAGGAACCTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: QKQIPNGNCPRSQDC*CDMIFHIPFQEPSS Trigger: GCTGGAAGGTTCCTGGAAGGGGATGTGAAAGATCATGTCGCAGCAGCAGTCCTGACTTCTGGGACAATTGCCATTTGGGATTTGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR GCA 90 bp | ACCCAGAAGCAAATCCCAAATGGCAATTGTCCCAGAAGTCAGGACTaGTGCTGCGACATGATCTTTCACATCCCCTTCCAGGAACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: TQKQIPNGNCPRSQD*CCDMIFHIPFQEPS Trigger: GGAAGGTTCCTGGAAGGGGATGTGAAAGATCATGTCGCAGCAGCAGTCCTGACTTCTGGGACAATTGCCATTTGGGATTTGCTTCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR GCA 90 bp | ACATTTATGCTTGGTGAATTTGCCCTTGGACCTGTTAACAGCCAGTaGGGCACAAGGAGGAAAAAGCAGCTGGCAGTGACCCAGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: TFMLGEFALGPVNSQ*GTRRKKQLAVTQCG Trigger: TCCACACTGGGTCACTGCCAGCTGCTTTTTCCTCCTTGTGCCGCACTGGCTGTTAACAGGTCCAAGGGCAAATTCACCAAGCATAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CCA 90 bp | GGGTTTCCAAAGAGAAACTACATCTTCACAAGCAGTTACGATACATaGCTCCTTAGCACCAGCTCTTTCCCACCACATGGCGCTCACATC | + |
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Preference number: 1 (lower is better) Translates to: GFPKRNYIFTSSYDT*LLSTSSFPPHGAHI Trigger: GATGTGAGCGCCATGTGGTGGGAAAGAGCTGGTGCTAAGGAGCCATGTATCGTAACTGCTTGTGAAGATGTAGTTTCTCTTTGGAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | GTGAGTCTTTTCACTCACGGGAGTCCTAGAATTCTTCCTACTGATTaGTTCTTGCCCTTTTCGATGCTTACCAAGGAGCGCCAGAGAATT | + |
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Preference number: 1 (lower is better) Translates to: VSLFTHGSPRILPTD*FLPFSMLTKERQRI Trigger: AATTCTCTGGCGCTCCTTGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAGGAAGAATTCTAGGACTCCCGTGAGTGAAAAGACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | TCTGCAGGAAACAGAAGGCCTTCAAGCATAGTACAAGAATGTATTTaGCTTTCTGTGGAAGGAGGAGAGACTGCTGCCAGGTTGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SAGNRRPSSIVQECI*LSVEGGETAARLKF Trigger: GAACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCTTGTACTATGCTTGAAGGCCTTCTGTTTCCTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | TCTTTGCTGCTTCCGTCGTCAGCAAATGTCATGATTTGTATTTGTTaGTTGCAAAAGGTCCCAGTGCTACTAACTAGCCTCCGCTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: SLLLPSSANVMICIC*LQKVPVLLTSLRFV Trigger: GACAAAGCGGAGGCTAGTTAGTAGCACTGGGACCTTTTGCAATCAACAAATACAAATCATGACATTTGCTGACGACGGAAGCAGCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | TCTTTCTTGCCATCAGGGCTGCTGGTGCTATGCAAAAGTTGTCCTTaGATGTCACCTGCTCTTGGTGTATGTAATACTTCTTTGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: SFLPSGLLVLCKSCP*MSPALGVCNTSLPC Trigger: ACAAGGCAAAGAAGTATTACATACACCAAGAGCAGGTGACATTCAAGGACAACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | TTTTCACTCACGGGAGTCCTAGAATTCTTCCTACTGATTGATTCTTaGCCTTTTCGATGCTTACCAAGGAGCGCCAGAGAATTAGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: FSLTGVLEFFLLIDS*PFRCLPRSARELVS Trigger: TGACACTAATTCTCTGGCGCTCCTTGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAGGAAGAATTCTAGGACTCCCGTGAGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | TCAGTGGAATGTTCATGTAACTCGAGGCATGCATTTCCACAAAGCTaGTTTTCTCTGAAAGTGAATGACTCAACAGGTAGAGGTGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SVECSCNSRHAFPQS*FSLKVNDSTGRGVA Trigger: AGCAACACCTCTACCTGTTGAGTCATTCACTTTCAGAGAAAATCAGCTTTGTGGAAATGCATGCCTCGAGTTACATGAACATTCCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | AGTACAAGAATGTATTTGACTTTCTGTGGAAGGAGGAGAGACTGCTaGCAGGTTGAAGTTCTTAGATGGACCAAGAATTTCATCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: STRMYLTFCGRRRDC*QVEVLRWTKNFIFL Trigger: CAGGAAGATGAAATTCTTGGTCCATCTAAGAACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCTTGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR GCA 90 bp | CATAGTACAAGAATGTATTTGACTTTCTGTGGAAGGAGGAGAGACTaGTGCCAGGTTGAAGTTCTTAGATGGACCAAGAATTTCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: HSTRMYLTFCGRRRD*CQVEVLRWTKNFIF Trigger: GAAGATGAAATTCTTGGTCCATCTAAGAACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCTTGTACTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR TCA 90 bp | TATCGGTATATAAATATATTTCCATCCTTTTGTCCAGCTAGCAAGTaGGAATCTGTACCCGACCATTTAACCAAAGACCAACTCTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: YRYINIFPSFCPASK*ESVPDHLTKDQLWS Trigger: TGACCAGAGTTGGTCTTTGGTTAAATGGTCGGGTACAGATTCTCACTTGCTAGCTGGACAAAAGGATGGAAATATATTTATATACCGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR TCA 90 bp | ATGACTTTGAATTACAGCTTCCAGAGCTATTTTTCTCTGACAATCTaGCATACGACGGGTTGTTCTAACATAGTATTCTGCAGGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: MTLNYSFQSYFSLTI*HTTGCSNIVFCRKQ Trigger: CTGTTTCCTGCAGAATACTATGTTAGAACAACCCGTCGTATGTCAGATTGTCAGAGAAAAATAGCTCTGGAAGCTGTAATTCAAAGTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR GCA 90 bp | TGCGGGCTGATTTTCGTTTCCCTCTGTGTCCTCTACCAGGTGGCGGTGTGGTGGCCCGGAAGCGTGTTCTaGTCTTTCTTGCCATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CGLIFVSLCVLYQVAVWWPGSVF*SFLPSG Trigger: CCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGG...CCACCACACCGCCACCTGGTAGAGGACACAGAGGGAAACGAAAATCAGCCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CAA 90 bp | GCAGTGTCTGCAGGAGTGAAAAGCACTATGGATGAAGAAAGGTCCTaGCTCCCTGGCTGCCTTCTCAGGGTTGGCCCTGGACGGTACGCT | + |
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Preference number: 2 (lower is better) Translates to: AVSAGVKSTMDEERS*LPGCLLRVGPGRYA Trigger: AGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCATCCATAGTGCTTTTCACTCCTGCAGACACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGCGACATGATCTTTCACATCCCCTTCCAGGAACCTTCCAGCCTGCCCCTCCAAGCAGAGCTTCCTaGGTCCCTTGGACTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLRHDLSHPLPGTFQPAPPSRAS*VPWTSA Trigger: TGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGG...AGGGGCAGGCTGGAAGGTTCCTGGAAGGGGATGTGAAAGATCATGTCGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR GCA 90 bp | TCTACCAGGTGGCGGTGTGGTGGCCTTTCCAGCAGGTCCTGGAGGAGAGCTGACTCTTGCCATCAGGGCTaGTGGTGCTATGCAAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: STRWRCGGLSSRSWRRADSCHQG*WCYAKV Trigger: AACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGA...GTCAGCTCTCCTCCAGGACCTGCTGGAAAGGCCACCACACCGCCACCTGGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCGTCTCCGAATCTCTTTGCAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCCTTTCCAGCAGGTCCTaGAGGAGAGCTGACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSPNLFAVPPEQHGFLLLSSRS*RRADLS Trigger: GCTGAGGTCAGCTCTCCTCCAGGACCTGCTGGAAAG...GAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR CAA 90 bp | CTGGAACACAGGGCTTCCAAGGGCCTGGCTCTCTTTGGCACAAGGTaGACTCACAACAACAAACAGGAGCCCCTTCTCAGAATAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LEHRASKGLALFGTR*THNNKQEPLLRIGS Trigger: GGAGCCTATTCTGAGAAGGGGCTCCTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCCTGTGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCTTGCTCCCTGGCTGCCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTATCTTCTTCAGGAGCTaGCCGGTTTTTAAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RSLLPGCLLRVGPGRYASIFFRS*PVFKFQ Trigger: CTGGAATTTAAAAACCGGCCAGCTCCTGAAGAAGAT...AGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGTCTCCGAATCTCTTTGCAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCGGTGAGAGCAGTTTCTaGGAGAGGCTTCCTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PPSPNLFAVPPEQHGFLLGESSF*ERLPEL Trigger: CAGTTCAGGAAGCCTCTCTCAGAAACTGCTCTCACC...GAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCCCTGGCTGCCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTCCTGGTTTTGTATTTGTTGATTaGAAAAGGTCCCAGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LLPGCLLRVGPGRYASPGFVFVD*KRSQCY Trigger: GTAGCACTGGGACCTTTTGCAATCAACAAATACAAA...ACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTCTTCCAAGCCCTCCGTCTCCGAATCTCTTTGCAGTTCCTCCAGAGCAGCCACAGAGCAGGAACTaGAAGGATTCTTTAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: APLPSPPSPNLFAVPPEQPQSRN*KDSLTL Trigger: CAGAGTTAAAGAATCCTTCCAGTTCCTGCTCTGTGG...CTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGGGCTTGGAAGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCCAGGAACCTTCCAGCCTGCCCCTGAGGAAGGGAACACAGCAGAACACCGTCAGCAAATGTCATaGTTTGTATTTGTTGATTGC | + |
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Preference number: 2 (lower is better) Translates to: PLPGTFQPAPEEGNTAEHRQQMS*FVFVDC Trigger: GCAATCAACAAATACAAATCATGACATTTGCTGACG...GTGTTCTGCTGTGTTCCCTTCCTCAGGGGCAGGCTGGAAGGTTCCTGGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAACACCCACACTCTGGGCCGTCTTAGGGTTAATCACCAGCAGCTGGAACAAAGCTGTTCATCTTTaGTGCTTCCGTCGTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SRTPTLWAVLGLITSSWNKAVHL*CFRRQQ Trigger: TTGCTGACGACGGAAGCAGCAAAGATGAACAGCTTT...GTTCCAGCTGCTGGTGATTAACCCTAAGACGGCCCAGAGTGTGGGTGTTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAACACCCACACTCTGGGCCGTCTTAGGGTTAATCACCAGCAGCTGGAACCCACAGAGCAGGAACTaGAAGGATTCTTTAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRTPTLWAVLGLITSSWNPQSRN*KDSLTL Trigger: CAGAGTTAAAGAATCCTTCCAGTTCCTGCTCTGTGG...GTTCCAGCTGCTGGTGATTAACCCTAAGACGGCCCAGAGTGTGGGTGTTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCGACATGATCTTTCACATCCCCTTCCAGGAACCTTCCAGCCTGCCCCTATCTTCTTCAGGAGCTaGCCGGTTTTTAAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLRHDLSHPLPGTFQPAPIFFRS*PVFKFQ Trigger: CTGGAATTTAAAAACCGGCCAGCTCCTGAAGAAGAT...AGGGGCAGGCTGGAAGGTTCCTGGAAGGGGATGTGAAAGATCATGTCGCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTTTAGATTGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGTTCAGTGGTACGCTTCTCCTGGTaGAACAGTGAGCTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PGFRLSQAGRSAVSVCSVVRFSW*NSELLF Trigger: GAAGAGGAGCTCACTGTTCCACCAGGAGAAGCGTAC...CACTGAACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAACCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGAGCTTCCTGCGTCCCTTGGACTTCAGCAAAAGTCAGTACAGTCTCATCGTGAAGTGCCAGGTATaGACTTTCTCCCACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KQSFLRPLDFSKSQYSLIVKCQV*TFSHCR Trigger: TCTGCAGTGGGAGAAAGTTCATACCTGGCACTTCAC...GATGAGACTGTACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCGGGCTGATTTTCGTTTCCCTCTGTGTCCTCTACCAGGTGGCGGTGTGGTGGCGTCAGCAAATGTCATaGTTTGTATTTGTTGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: CGLIFVSLCVLYQVAVWWRQQMS*FVFVDC Trigger: GCAATCAACAAATACAAATCATGACATTTGCTGACG...CCACCACACCGCCACCTGGTAGAGGACACAGAGGGAAACGAAAATCAGCCCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCGTGCTCGTGTCCAGCATGCCACTTTCACTCTGGTCAGTGTCTTCACTGGAGATTTCAGGAGGACTTaGTTTTCACTGTCATCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SRARVQHATFTLVSVFTGDFRRT*FSLSSP Trigger: TGGTGATGACAGTGAAAAGCAAGTCCTCCTGAAATC...TCCAGTGAAGACACTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CAA 90 bp | GACGCTTGCAGGTTGGTGTCCGGTTTTGGTGAGCAGGCTGAACTGTaGCACTGTTTACTGTTATTGACAAGACTGTTTGTGTCTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: DACRLVSGFGEQAEL*HCLLLLTRLFVSPK Trigger: CTTGGGAGACACAAACAGTCTTGTCAATAACAGTAAACAGTGCAACAGTTCAGCCTGCTCACCAAAACCGGACACCAACCTGCAAGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAGAGCTTCCTGCGTCCCTTGGACTTCAGCAAAAGTCAGTACAGTCTCATCCAGGGATCTGAGACCTaGGACTTAAAAGGTGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KQSFLRPLDFSKSQYSLIQGSET*DLKGES Trigger: AGACTCACCTTTTAAGTCTCAGGTCTCAGATCCCTG...GATGAGACTGTACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGCTTCCTGCGTCCCTTGGACTTCAGCAAAAGTCAGTACAGTCTCATCAGGATTTCAGGAGGACTTaGTTTTCACTGTCATCACCA | + |
|
Preference number: 2 (lower is better) Translates to: AELPASLGLQQKSVQSHQDFRRT*FSLSSP Trigger: TGGTGATGACAGTGAAAAGCAAGTCCTCCTGAAATC...CTGATGAGACTGTACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGTAGTACCAAGCAGAGCTTCCTGCGTCCCTTGGACTTCAGCAAAAGTCAGTCAACATCAAGTATCTaGGAGATGTTTTCTCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SGSTKQSFLRPLDFSKSQSTSSI*EMFSPV Trigger: GACTGGAGAAAACATCTCTCAGATACTTGATGTTGA...CTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGGTACTACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCACAGCAACGCCCTGATTTCTCTGATTTCCAAACTTCCCAAAGCTACACATATACTGGAACCTCTGTaGAGTGCCAGGTATGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: EHSNALISLISKLPKATHILEPL*SARYEL Trigger: AAGTTCATACCTGGCACTTCACAGAGGTTCCAGTAT...ATGTGTAGCTTTGGGAAGTTTGGAAATCAGAGAAATCAGGGCGTTGCTGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGGTTTAGATTGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGTTCAGTGGCTGGCAAGTTACTATaGGTGAGATCATTTACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PGFRLSQAGRSAVSVCSVAGKLL*VRSFTE Trigger: TTCTGTAAATGATCTCACGCATAGTAACTTGCCAGC...CACTGAACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAACCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CAA 90 bp | TTCTGCAGGAAACAGAAGGCCTTCAAGCATAGTACAAGAATGTATTaGACTTTCTGTGGAAGGAGGAGAGACTGCTGCCAGGTTGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FCRKQKAFKHSTRMY*TFCGRRRDCCQVEV Trigger: AACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCTTGTACTATGCTTGAAGGCCTTCTGTTTCCTGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CAA 90 bp | GGATTCTTTAACTCTGAAACCAACTGTAGGTTTCCTGGGTTTAGATaGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGTTCAGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GFFNSETNCRFPGFR*SQAGRSAVSVCSVE Trigger: TTCCACTGAACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAACCCAGGAAACCTACAGTTGGTTTCAGAGTTAAAGAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAAACCAACTGTAGGTTTCCTGGGTTTAGATTGTCACAAGCAGGGCGATCTTCCAGATGGTTGCTTTaGAATGTGTCACAAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SETNCRFPGFRLSQAGRSSRWLL*NVSQGK Trigger: CTTTCCTTGTGACACATTGCAAAGCAACCATCTGGA...AGATCGCCCTGCTTGTGACAATCTAAACCCAGGAAACCTACAGTTGGTTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAACCAACTGTAGGTTTCCTGGGTTTAGATTGTCACAAGCAGGGCGATCTGAAGCAAATCCCAAATaGCAATTGTCCCAGAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SETNCRFPGFRLSQAGRSEANPK*QLSQKS Trigger: TGACTTCTGGGACAATTGCCATTTGGGATTTGCTTC...AGATCGCCCTGCTTGTGACAATCTAAACCCAGGAAACCTACAGTTGGTTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTTTTCACTGTCATCACCAGAAGAGCACAGCAACGCCCTGATTTCTCTGATCTACTGATTGATTCTTaGCCTTTTCGATGCTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LLFTVITRRAQQRPDFSDLLIDS*PFRCLP Trigger: TGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAG...ATCAGAGAAATCAGGGCGTTGCTGTGCTCTTCTGGTGATGACAGTGAAAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTTGAAGTTCTTAGATGGACCAAGAATTTCATCTTCCTGAAGAGGTTCATTGCTTCCTGCGTCCCTTaGACTTCAGCAAAAGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QVEVLRWTKNFIFLKRFIASCVP*TSAKVS Trigger: ACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGC...AATGAACCTCTTCAGGAAGATGAAATTCTTGGTCCATCTAAGAACTTCAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGATTGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGTTCAGTGGAATGTGCAAGTTACTATGCGTaGGATCATTTACAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: FRLSQAGRSAVSVCSVECASYYA*DHLQNK Trigger: CTTGTTCTGTAAATGATCTCACGCATAGTAACTTGC...ACATTCCACTGAACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGCTGGCCGGTTTTTAAATTCCAGATCACAATGCTGTTCACAGTGGTAGTATTTGTATTTGTTGATTaGAAAAGGTCCCAGTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RSWPVFKFQITMLFTVVVFVFVD*KRSQCY Trigger: GTAGCACTGGGACCTTTTGCAATCAACAAATACAAA...TACTACCACTGTGAACAGCATTGTGATCTGGAATTTAAAAACCGGCCAGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCCAAATGACTTTGAATTACAGCTTCCAGAGCTATTTTTCTCTGACAATCTGGTTGAAGTTCTTAGATaGACCAAGAATTTCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HPNDFELQLPELFFSDNLVEVLR*TKNFIF Trigger: GAAGATGAAATTCTTGGTCCATCTAAGAACTTCAAC...CAGATTGTCAGAGAAAAATAGCTCTGGAAGCTGTAATTCAAAGTCATTTGGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | GTCCTTGCTCCCTGGCTGCCTTCTCAGGGTTGGCCCTaGACGGTACGCTTCTCCTGGTGGAACAGTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLAPWLPSQGWP*TVRFSWWNSEL Trigger: GAGCTCACTGTTCCACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | CCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTCCTaGTGGAACAGTGAGCTCCTCTTCCAAGCCCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PSQGWPWTVRFS*WNSELLFQALR Trigger: ACGGAGGGCTTGGAAGAGGAGCTCACTGTTCCACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCTTGCTCCCTGGCTGCCTTCTCAGGGTTGGCCCTGGACGGTACGCTTCTGTGTTCTGCTCTTTCTaGCCATCAGGGCTGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RSLLPGCLLRVGPGRYASVFCSF*PSGLLV Trigger: CACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACAC...AGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | AGAAAGGTCCTTGCTCCCTGGCTGCCTTCTCAGGGTTaGCCCTGGACGGTACGCTTCTCCTGGTGGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RKVLAPWLPSQG*PWTVRFSWWNS Trigger: ACTGTTCCACCAGGAGAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | GCCAGTGCGGCACAAGGAGGAAAAAGCAGCTGGCAGTaGCCCAGTGTGGAGGTGCGGGCTGATTTTCGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASAAQGGKSSWQ*PSVEVRADFRF Trigger: GAAACGAAAATCAGCCCGCACCTCCACACTGGGTCACTGCCAGCTGCTTTTTCCTCCTTGTGCCGCACTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | TCCCACGGCGTCTTTGTTGTCCCCGGAAGCGTGTTCTaGTCTTTCTTGCCATCAGGGCTGCTGGTGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: SHGVFVVPGSVF*SFLPSGLLVLC Trigger: GCATAGCACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGGGACAACAAAGACGCCGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | ACACTCTGGGCCGTCTTAGGGTTAATCACCAGCAGCTaGAACACAGGGCTTCCAAGGGCCTGGCTCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TLWAVLGLITSS*NTGLPRAWLSL Trigger: CAAAGAGAGCCAGGCCCTTGGAAGCCCTGTGTTCCAGCTGCTGGTGATTAACCCTAAGACGGCCCAGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR CCA 72 bp | TGTCCCGTGCTCGTGTCCAGCATGCCACTTTCACTCTaGTCAGTGTCTTCACTGGAGAGGACGACCGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CPVLVSSMPLSL*SVSSLERTTAL Trigger: TAAGGCGGTCGTCCTCTCCAGTGAAGACACTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | AGGCAGGTTGTCCTTGCCTACCTGACGCTTGCAGGTTaGTGTCCGGTTTTGGTGAGCAGGCTGAACTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RQVVLAYLTLAG*CPVLVSRLNCC Trigger: GCAACAGTTCAGCCTGCTCACCAAAACCGGACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAACCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | GTTTCTGAGAGAGGCTTCCTGAACTGGACTGTCCCGTaGTCGTGTCCAGCATGCCACTTTCACTCTGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSERGFLNWTVP*SCPACHFHSGQ Trigger: CTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGACAGTCCAGTTCAGGAAGCCTCTCTCAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | GCTGGAACACAGGGCTTCCAAGGGCCTGGCTCTCTTTaGCACAAGGTTGACTCACAACAACAAACAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGTQGFQGPGSL*HKVDSQQQTGA Trigger: GGCTCCTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCCTGTGTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR CCA 72 bp | CACAAGGAGGAAAAAGCAGCTGGCAGTGACCCAGTGTaGAGGTGCGGGCTGATTTTCGTTTCCCTCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HKEEKAAGSDPV*RCGLIFVSLCV Trigger: GACACAGAGGGAAACGAAAATCAGCCCGCACCTCCACACTGGGTCACTGCCAGCTGCTTTTTCCTCCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | TGTGCAGCTTCAGTAGATAGAGTCTCACCGGCTGCTTaGGAGCCAAGAGCTGGAGTCATGCCTAAGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CAASVDRVSPAA*EPRAGVMPKMG Trigger: CCCCATCTTAGGCATGACTCCAGCTCTTGGCTCCCAAGCAGCCGGTGAGACTCTATCTACTGAAGCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCACTGTCACAGGCAGGTTGTCCTTGCCTACCTGACGCTTGCAGGTTGGTGTAGCTTCCTGCGTCCCTaGGACTTCAGCAAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHCHRQVVLAYLTLAGWCSFLRP*DFSKSQ Trigger: CTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCT...ACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAACCTGCCTGTGACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | GGGCTTCCAAGGGCCTGGCTCTCTTTGGCACAAGGTTaGCTCACAACAACAAACAGGAGCCCCTTCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLPRAWLSLAQG*LTTTNRSPFSE Trigger: TTCTGAGAAGGGGCTCCTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR TCA 72 bp | CGCAGCAGTGTCTGCAGGAGTGAAAAGCACTATGGATaGAGAAAGGTCCTTGCTCCCTGGCTGCCTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSVCRSEKHYG*RKVLAPWLPSQ Trigger: CTGAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCATCCATAGTGCTTTTCACTCCTGCAGACACTGCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | ACCAACTCTGGTCAGAGACAGGTGGGAGGAGAGCCGTaGAGTGACCCAGAAGCAAATCCCAAATGGCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: TNSGQRQVGGEP*SDPEANPKWQL Trigger: CAATTGCCATTTGGGATTTGCTTCTGGGTCACTGCACGGCTCTCCTCCCACCTGTCTCTGACCAGAGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR GCA 72 bp | TTCCTGAACTGGACTGTCCCGTGCTCGTGTCCAGCATaGCACTTTCACTCTGGTCAGTGTCTTCACTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLNWTVPCSCPA*HFHSGQCLHWR Trigger: TCTCCAGTGAAGACACTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCACGGGACAGTCCAGTTCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTACCAGGTGGCGGTGTGGTGGCCTTTCCAGCAGGTCCTGGAGGAGAGCTGACAGTACAAGAATGTATTaGACTTTCTGTGGAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: STRWRCGGLSSRSWRRADSTRMY*TFCGRR Trigger: CCTCCTTCCACAGAAAGTCAAATACATTCTTGTACT...GTCAGCTCTCCTCCAGGACCTGCTGGAAAGGCCACCACACCGCCACCTGGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | AGCTCCTCTTCCAAGCCCTCCGTCTCCGAATCTCTTTaGAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSSSKPSVSESL*SSSRAAWFPSL Trigger: TAGAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGGGCTTGGAAGAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | AGCTCAGTCAATAGGATTGTAGCTCAGCCTGACTTGTaGCAGAAAGCCCAGCACTGGAGAGGTAGAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSVNRIVAQPDL*QKAQHWRGRSR Trigger: CCTGCTTCTACCTCTCCAGTGCTGGGCTTTCTGGCACAAGTCAGGCTGAGCTACAATCCTATTGACTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | CCATTTAACCAAAGACCAACTCTGGTCAGAGACAGGTaGGAGGAGAGCCGTGCAGTGACCCAGAAGCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: PFNQRPTLVRDR*EESRAVTQKQI Trigger: GATTTGCTTCTGGGTCACTGCACGGCTCTCCTCCCACCTGTCTCTGACCAGAGTTGGTCTTTGGTTAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTTTCACTGTCATCACCAGAAGAGCACAGCAACGCCCTGATTTCTCTGATCAACAGGTAGAGGTGTaGCTTGGGGGCCAGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLFTVITRRAQQRPDFSDQQVEV*LGGQSH Trigger: GTGACTCTGGCCCCCAAGCAACACCTCTACCTGTTG...ATCAGAGAAATCAGGGCGTTGCTGTGCTCTTCTGGTGATGACAGTGAAAAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | GCGTGTTCTGCTCTTTCTTGCCATCAGGGCTGCTGGTaGTATGCAAAAGTTGTCCTTGAATGTCACCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ACSALSCHQGCW*YAKVVLECHLL Trigger: GAGCAGGTGACATTCAAGGACAACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | TCTTGTGCCACCAGGTTTGTGGATGAAGCCGGGCCCTaGGTAGTAATTTTGCAGCCACTTTTAGGAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCATRFVDEAGP*VVILQPLLGGV Trigger: TACACCTCCTAAAAGTGGCTGCAAAATTACTACTCAGGGCCCGGCTTCATCCACAAACCTGGTGGCACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | ACAGTGGTAGTACCAAGCAGAGCTTCCTGCGTCCCTTaGACTTCAGCAAAAGTCAGTACAGTCTCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVVVPSRASCVP*TSAKVSTVSSG Trigger: TCCTGATGAGACTGTACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGGTACTACCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCGTCTCCGAATCTCTTTGCAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCATTCCCCTTTCTGATTaGCCAGATGGCGGAATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: PPSPNLFAVPPEQHGFLLIPLSD*PDGGIN Trigger: ATTAATTCCGCCATCTGGCAAATCAGAAAGGGGAAT...GAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | TTGACAAGACTGTTTGTGTCTCCCAAGAGAGGAGGTTaGGATGTAGAGCAAGGCTGTGCAGCTTCAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTRLFVSPKRGG*DVEQGCAASVD Trigger: ATCTACTGAAGCTGCACAGCCTTGCTCTACATCCCAACCTCCTCTCTTGGGAGACACAAACAGTCTTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATCTTTCACATCCCCTTCCAGGAACCTTCCAGCCTGCCCCTGAGGAAGGGATGTCATGATTTGTATTaGTTGATTGCAAAAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: MIFHIPFQEPSSLPLRKGCHDLY*LIAKGP Trigger: GGGACCTTTTGCAATCAACAAATACAAATCATGACA...TCCCTTCCTCAGGGGCAGGCTGGAAGGTTCCTGGAAGGGGATGTGAAAGATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTTTCACTGTCATCACCAGAAGAGCACAGCAACGCCCTGATTTCTCTGATGGTGCTATGCAAAAGTaGTCCTTGAATGTCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFTVITRRAQQRPDFSDGAMQK*SLNVTC Trigger: GCAGGTGACATTCAAGGACAACTTTTGCATAGCACC...ATCAGAGAAATCAGGGCGTTGCTGTGCTCTTCTGGTGATGACAGTGAAAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | TTCACTCACGGGAGTCCTAGAATTCTTCCTACTGATTaGTTCTTGCCCTTTTCGATGCTTACCAAGGAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: FTHGSPRILPTD*FLPFSMLTKER Trigger: GCGCTCCTTGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAGGAAGAATTCTAGGACTCCCGTGAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CCA 72 bp | AAGAGAAACTACATCTTCACAAGCAGTTACGATACATaGCTCCTTAGCACCAGCTCTTTCCCACCACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KRNYIFTSSYDT*LLSTSSFPPHG Trigger: GCCATGTGGTGGGAAAGAGCTGGTGCTAAGGAGCCATGTATCGTAACTGCTTGTGAAGATGTAGTTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTAGTACCAAGCAGAGCTTCCTGCGTCCCTTGGACTTCAGCAAAAGTCAGCATGATTTGTATTTGTaGATTGCAAAAGGTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SGSTKQSFLRPLDFSKSQHDLYL*IAKGPS Trigger: ACTGGGACCTTTTGCAATCAACAAATACAAATCATG...CTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGGTACTACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGGTTTAGATTGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGTTCAGTGGAATGTCACCTGCTCTaGGTGTATGTAATACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGFRLSQAGRSAVSVCSVECHLL*VYVILL Trigger: AAGAAGTATTACATACACCAAGAGCAGGTGACATTC...CACTGAACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAACCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | TCATTTACAGAACAAGAATTGGGACTTCCTGGCAGCTaGCCATGGGCACGCACAGCTTTATATACTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFTEQELGLPGS*PWARTALYTTE Trigger: CTCAGTAGTATATAAAGCTGTGCGTGCCCATGGTCAGCTGCCAGGAAGTCCCAATTCTTGTTCTGTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | GTGAGCAGGCTGAACTGTTGCACTGTTTACTGTTATTaGCAAGACTGTTTGTGTCTCCCAAGAGAGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSRLNCCTVYCY*QDCLCLPREEV Trigger: AACCTCCTCTCTTGGGAGACACAAACAGTCTTGTCAATAACAGTAAACAGTGCAACAGTTCAGCCTGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATTTCTCTGATTTCCAAACTTCCCAAAGCTACACATATAAGATTGTAAACCGTCTCCGAATCTCTTaGCAGTTCCTCCAGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PDFSDFQTSQSYTYKIVNRLRIS*QFLQSS Trigger: GCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACG...GTTTACAATCTTATATGTGTAGCTTTGGGAAGTTTGGAAATCAGAGAAATCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | ATTTGTAATACTGGAACCTCTGTGAAGTGCCAGGTATaGACTTTCTCCCACTGCAGAGAATTCAAGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ICNTGTSVKCQV*TFSHCREFKGF Trigger: GAAACCCTTGAATTCTCTGCAGTGGGAGAAAGTTCATACCTGGCACTTCACAGAGGTTCCAGTATTACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | CTTCCGTCGTCAGCAAATGTCATGATTTGTATTTGTTaGTTGCAAAAGGTCCCAGTGCTACTAACTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSANVMICIC*LQKVPVLLTSL Trigger: GAGGCTAGTTAGTAGCACTGGGACCTTTTGCAATCAACAAATACAAATCATGACATTTGCTGACGACGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | GTTCATCTTTGCTGCTTCCGTCGTCAGCAAATGTCATaGTTTGTATTTGTTGATTGCAAAAGGTCCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VHLCCFRRQQMS*FVFVDCKRSQC Trigger: GCACTGGGACCTTTTGCAATCAACAAATACAAATCATGACATTTGCTGACGACGGAAGCAGCAAAGATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | ATGTATTTGACTTTCTGTGGAAGGAGGAGAGACTGCTaGCAGGTTGAAGTTCTTAGATGGACCAAGAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: MYLTFCGRRRDC*QVEVLRWTKNF Trigger: GAAATTCTTGGTCCATCTAAGAACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | AGAATGTATTTGACTTTCTGTGGAAGGAGGAGAGACTaGTGCCAGGTTGAAGTTCTTAGATGGACCAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RMYLTFCGRRRD*CQVEVLRWTKN Trigger: ATTCTTGGTCCATCTAAGAACTTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTTTCACTGTCATCACCAGAAGAGCACAGCAACGCCCTGATTTCTCTGATCATGATTTGTATTTGTaGATTGCAAAAGGTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLFTVITRRAQQRPDFSDHDLYL*IAKGPS Trigger: ACTGGGACCTTTTGCAATCAACAAATACAAATCATG...ATCAGAGAAATCAGGGCGTTGCTGTGCTCTTCTGGTGATGACAGTGAAAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | GAATTCTTCCTACTGATTGATTCTTGCCCTTTTCGATaGTTACCAAGGAGCGCCAGAGAATTAGTGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EFFLLIDSCPFR*LPRSARELVSK Trigger: TTTTGACACTAATTCTCTGGCGCTCCTTGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAGGAAGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCAAATGACTTTGAATTACAGCTTCCAGAGCTATTTTTCTCTGACAATCTGATCCAGATGGTTGCTTaGCAATGTGTCACAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HPNDFELQLPELFFSDNLIQMVA*QCVTRK Trigger: TTTCCTTGTGACACATTGCAAAGCAACCATCTGGAT...CAGATTGTCAGAGAAAAATAGCTCTGGAAGCTGTAATTCAAAGTCATTTGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | TGTTCATGTAACTCGAGGCATGCATTTCCACAAAGCTaGTTTTCTCTGAAAGTGAATGACTCAACAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSCNSRHAFPQS*FSLKVNDSTGR Trigger: TCTACCTGTTGAGTCATTCACTTTCAGAGAAAATCAGCTTTGTGGAAATGCATGCCTCGAGTTACATGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | AATTACAGCTTCCAGAGCTATTTTTCTCTGACAATCTaGCATACGACGGGTTGTTCTAACATAGTATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NYSFQSYFSLTI*HTTGCSNIVFC Trigger: GCAGAATACTATGTTAGAACAACCCGTCGTATGTCAGATTGTCAGAGAAAAATAGCTCTGGAAGCTGTAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR GCA 72 bp | TTAGAGTTTGGGGTACTATTTGCTGGCAAGTTACTATaGGTGAGATCATTTACAGAACAAGAATTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LEFGVLFAGKLL*VRSFTEQELGL Trigger: AAGTCCCAATTCTTGTTCTGTAAATGATCTCACGCATAGTAACTTGCCAGCAAATAGTACCCCAAACTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR TCA 72 bp | ATAAATATATTTCCATCCTTTTGTCCAGCTAGCAAGTaGGAATCTGTACCCGACCATTTAACCAAAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: INIFPSFCPASK*ESVPDHLTKDQ Trigger: TTGGTCTTTGGTTAAATGGTCGGGTACAGATTCTCACTTGCTAGCTGGACAAAAGGATGGAAATATATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR TCA 72 bp | TTGAAGTTCTTAGATGGACCAAGAATTTCATCTTCCTaGAGAGGTTCATTTCTCTCATCAACAGTGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LKFLDGPRISSS*RGSFLSSTVLL Trigger: CAGTAACACTGTTGATGAGAGAAATGAACCTCTTCAGGAAGATGAAATTCTTGGTCCATCTAAGAACTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATTTCTCTGATTTCCAAACTTCCCAAAGCTACACATATAAGATTGTAAACAAACCTCCAAACTATTaGCCTCTTAAAAGTATCGGT | + |
|
Preference number: 3 (lower is better) Translates to: PDFSDFQTSQSYTYKIVNKPPNY*PLKSIG Trigger: ACCGATACTTTTAAGAGGCAAATAGTTTGGAGGTTT...GTTTACAATCTTATATGTGTAGCTTTGGGAAGTTTGGAAATCAGAGAAATCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR CAA 72 bp | AGGGCTTCCAAGGGCCTGGCTCTCTTTGGCACAAGGTaGACTCACAACAACAAACAGGAGCCCCTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RASKGLALFGTR*THNNKQEPLLR Trigger: TCTGAGAAGGGGCTCCTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAGAGCCAGGCCCTTGGAAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131657.8 |
||
| 3UTR CAA 72 bp | GAGCTCCTCTTCCAAGCCCTCCGTCTCCGAATCTCTTaGCAGTTCCTCCAGAGCAGCATGGTTTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLFQALRLRIS*QFLQSSMVSFS Trigger: AGAGAAGGAAACCATGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGGGCTTGGAAGAGGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CAA 72 bp | GGTAGCTCAGTCAATAGGATTGTAGCTCAGCCTGACTaGTGCCAGAAAGCCCAGCACTGGAGAGGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSVNRIVAQPD*CQKAQHWRGRS Trigger: GCTTCTACCTCTCCAGTGCTGGGCTTTCTGGCACAAGTCAGGCTGAGCTACAATCCTATTGACTGAGCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGAATGTATTTGACTTTCTGTGGAAGGAGGAGAGACTGCTGCCAGGTTGAACCTTCTCCGCATAGCTaGGGGGCTTCCCGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRMYLTFCGRRRDCCQVEPSPHS*GASRKA Trigger: AGCTTTCCGGGAAGCCCCTCAGCTATGCGGAGAAGG...TTCAACCTGGCAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATACATTCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| 3UTR CAA 72 bp | CACAGTGGTAGTACCAAGCAGAGCTTCCTGCGTCCCTaGGACTTCAGCAAAAGTCAGTACAGTCTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSTKQSFLRP*DFSKSQYSLIR Trigger: CCTGATGAGACTGTACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGGTACTACCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| 3UTR CAA 72 bp | GTCTTTGTTGTCCCCGGAAGCGTGTTCTGCTCTTTCTaGCCATCAGGGCTGCTGGTGCTATGCAAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFVVPGSVFCSF*PSGLLVLCKSC Trigger: ACAACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGGGACAACAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTTCCAAGCCCTCCGTCTCCGAATCTCTTTGCAGTTCCTCCAGAGCAGGTCGAGCAAGTGTCCTaGTGTATTCCTTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: APLPSPPSPNLFAVPPEQVEQVS*CIPFSK Trigger: TTTTGAAAAAGGAATACAGCAGGACACTTGCTCGAC...CTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACGGAGGGCTTGGAAGAGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCAGGTGGCGGTGTGGTaGCCTTTCCAGCAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFQVAVW*PFQQVL Trigger: CAGGACCTGCTGGAAAGGCCACCACACCGCCACCTG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| 3UTR CAA 72 bp | GGTGAGCAGGCTGAACTGTTGCACTGTTTACTGTTATaGACAAGACTGTTTGTGTCTCCCAAGAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEQAELLHCLLL*TRLFVSPKRGG Trigger: ACCTCCTCTCTTGGGAGACACAAACAGTCTTGTCAATAACAGTAAACAGTGCAACAGTTCAGCCTGCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACCTTCTCCGCATAGCTaGGGGGCTTCCCGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSPSPHS*GASRKA Trigger: AGCTTTCCGGGAAGCCCCTCAGCTATGCGGAGAAGG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCCTTCTCCGCATAGCTaGGGGGCTTCCCGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSPSPHS*GASRKA Trigger: AGCTTTCCGGGAAGCCCCTCAGCTATGCGGAGAAGG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTTCCAGCCTGCCCCTaGGGAAGGGAACACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLPACP*GREHSR Trigger: TCTGCTGTGTTCCCTTCCTCAGGGGCAGGCTGGAAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCTTCCAGCCTGCCCCTaGGGAAGGGAACACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSLPACP*GREHSR Trigger: TCTGCTGTGTTCCCTTCCTCAGGGGCAGGCTGGAAG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCTCCTTGCTCCCTGGCTaGCTTCTCAGGGTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFSLLPG*LLRVGP Trigger: AGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGA...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTCCTTGCTCCCTGGCTaGCTTCTCAGGGTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSSLLPG*LLRVGP Trigger: AGGGCCAACCCTGAGAAGGCAGCCAGGGAGCAAGGA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACTGGTCAGAGACAGGTaGGAGGAGAGCCGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSLVRDR*EESRAV Trigger: CACTGCACGGCTCTCCTCCCACCTGTCTCTGACCAG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTGGTCAGAGACAGGTaGGAGGAGAGCCGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLVRDR*EESRAV Trigger: CACTGCACGGCTCTCCTCCCACCTGTCTCTGACCAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCTGCCTTCTCAGGGTTaGCCCTGGACGGTACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSLPSQG*PWTVRF Trigger: GAAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTCTCACCGGCTGCTTaGGAGCCAAGAGCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVSPAA*EPRAGV Trigger: GACTCCAGCTCTTGGCTCCCAAGCAGCCGGTGAGAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| 3UTR CAA 72 bp | AACTCTGAAACCAACTGTAGGTTTCCTGGGTTTAGATaGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSETNCRFPGFR*SQAGRSAVSVC Trigger: ACAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCTAAACCCAGGAAACCTACAGTTGGTTTCAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142952.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTGAGAGAGGCTTCCTaGACTGGACTGTCCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLREAS*TGLSRA Trigger: AGCACGGGACAGTCCAGTTCAGGAAGCCTCTCTCAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTCCTGGTGGAACAGTaGGCTCCTCTTCCAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLLVEQ*APLPSP Trigger: AGGGCTTGGAAGAGGAGCTCACTGTTCCACCAGGAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCAGGCAGGTTGTCCTTaGCTACCTGACGCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSQAGCP*LPDACR Trigger: CCTGCAAGCGTCAGGTAGGCAAGGACAACCTGCCTG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTTTCCAGCAGGTCCTaGAGGAGAGCTGACCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLSSRS*RRADLS Trigger: GCTGAGGTCAGCTCTCCTCCAGGACCTGCTGGAAAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAAGGTCCTTGCTCCCTaGCTGCCTTCTCAGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSKVLAP*LPSQGW Trigger: CCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCTT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTAAGGTCCTTGCTCCCTaGCTGCCTTCTCAGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSKVLAP*LPSQGW Trigger: CCAACCCTGAGAAGGCAGCCAGGGAGCAAGGACCTT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| 3UTR CAA 72 bp | ACAGTCTCATCAGGAGGCATCAAAAGCTGTTCATCTTaGCTGCTTCCGTCGTCAGCAAATGTCATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVSSGGIKSCSS*LLPSSANVMIC Trigger: ACAAATCATGACATTTGCTGACGACGGAAGCAGCAAAGATGAACAGCTTTTGATGCCTCCTGATGAGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131657.8 ENSMUST00000142952.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGCTGACCTCAGCTGGTaGGAGCAGTTTCTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFADLSW*EQFLRE Trigger: CTCTCTCAGAAACTGCTCTCACCAGCTGAGGTCAGC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTTGTCCTTGCCTACCTaGCGCTTGCAGGTTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSLSLPT*RLQVGV Trigger: GACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATTGTCCTTGCCTACCTaGCGCTTGCAGGTTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSLSLPT*RLQVGV Trigger: GACACCAACCTGCAAGCGTCAGGTAGGCAAGGACAA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCCAAGCAGAGCTTCCTaGGTCCCTTGGACTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSPSRAS*VPWTSA Trigger: TGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACCAAGCAGAGCTTCCTaGGTCCCTTGGACTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSPSRAS*VPWTSA Trigger: TGCTGAAGTCCAAGGGACGCAGGAAGCTCTGCTTGG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACCCGGAAGCGTGTTCTaGTCTTTCTTGCCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSPGSVF*SFLPSG Trigger: CCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCCCGGAAGCGTGTTCTaGTCTTTCTTGCCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFPGSVF*SFLPSG Trigger: CCCTGATGGCAAGAAAGAGCAGAACACGCTTCCGGG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGACCCAGTGTGGAGGTaGGGGCTGATTTTCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSDPVWR*GLIFVS Trigger: GGAAACGAAAATCAGCCCGCACCTCCACACTGGGTC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGGTAGAGGTGTTGCTTaGGGGCCAGAGTCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSGRGVA*GPESLS Trigger: TGACAGTGACTCTGGCCCCCAAGCAACACCTCTACC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGATGAAGCCGGGCCCTaGGTAGTAATTTTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSDEAGP*VVILQP Trigger: TGGCTGCAAAATTACTACTCAGGGCCCGGCTTCATC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGGTGAGAGCAGTTTCTaGGAGAGGCTTCCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSGESSF*ERLPEL Trigger: CAGTTCAGGAAGCCTCTCTCAGAAACTGCTCTCACC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCTGCTCGTGTCCAGCATaGCACTTTCACTCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFCSCPA*HFHSGQ Trigger: CTGACCAGAGTGAAAGTGGCATGCTGGACACGAGCA...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTACCAAAGACCAACTCTaGTCAGAGACAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSTKDQL*SETGGR Trigger: CCTCCCACCTGTCTCTGACCAGAGTTGGTCTTTGGT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAACCAAAGACCAACTCTaGTCAGAGACAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSTKDQL*SETGGR Trigger: CCTCCCACCTGTCTCTGACCAGAGTTGGTCTTTGGT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGTACGCTTCTCCTGGTaGAACAGTGAGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSVRFSW*NSELLF Trigger: GAAGAGGAGCTCACTGTTCCACCAGGAGAAGCGTAC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTACGCTTCTCCTGGTaGAACAGTGAGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVRFSW*NSELLF Trigger: GAAGAGGAGCTCACTGTTCCACCAGGAGAAGCGTAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCCCAAGAGAGGAGGTTaGGATGTAGAGCAAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSPKRGG*DVEQGC Trigger: ACAGCCTTGCTCTACATCCCAACCTCCTCTCTTGGG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCCCAAGAGAGGAGGTTaGGATGTAGAGCAAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFPKRGG*DVEQGC Trigger: ACAGCCTTGCTCTACATCCCAACCTCCTCTCTTGGG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTGAAGTGCCAGGTATaGACTTTCTCCCACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVKCQV*TFSHCR Trigger: TCTGCAGTGGGAGAAAGTTCATACCTGGCACTTCAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGTGAAGTGCCAGGTATaGACTTTCTCCCACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSVKCQV*TFSHCR Trigger: TCTGCAGTGGGAGAAAGTTCATACCTGGCACTTCAC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTGTCCAGCTAGCAAGTaGGAATCTGTACCCGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSCPASK*ESVPDH Trigger: ATGGTCGGGTACAGATTCTCACTTGCTAGCTGGACA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGTCTCCGAATCTCTTTaGAGTTCCTCCAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSVSESL*SSSRAA Trigger: TGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGAC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTCTCCGAATCTCTTTaGAGTTCCTCCAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVSESL*SSSRAA Trigger: TGCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATGAAGAAAGGTCCTTaGTCCCTGGCTGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFMKKGP*SLAAFS Trigger: TGAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCAT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTATGAAGAAAGGTCCTTaGTCCCTGGCTGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSMKKGP*SLAAFS Trigger: TGAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCAT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGGCGCAGCAGTGTCTaGAGGAGTGAAAAGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSRRSSV*RSEKHY Trigger: ATAGTGCTTTTCACTCCTGCAGACACTGCTGCGCCT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCAAGAGCTGGAGTCATaGCTAAGATGGGGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSQELES*LRWGKQ Trigger: CTGCTTTCCCCATCTTAGGCATGACTCCAGCTCTTG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCAAGAGCTGGAGTCATaGCTAAGATGGGGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFQELES*LRWGKQ Trigger: CTGCTTTCCCCATCTTAGGCATGACTCCAGCTCTTG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGCTTCCTGCGTCCCTTaGACTTCAGCAAAAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFASCVP*TSAKVS Trigger: ACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGCTTCCTGCGTCCCTTaGACTTCAGCAAAAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSASCVP*TSAKVS Trigger: ACTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATTAATCACCAGCAGCTaGAACACAGGGCTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSLITSS*NTGLPR Trigger: CCTTGGAAGCCCTGTGTTCCAGCTGCTGGTGATTAA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCCTTCTCAGCTCTTTTaGCACGCTGAAGTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFPSQLF*HAEVEQ Trigger: TTGCTCGACTTCAGCGTGCCAAAAGAGCTGAGAAGG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCCTTCTCAGCTCTTTTaGCACGCTGAAGTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSPSQLF*HAEVEQ Trigger: TTGCTCGACTTCAGCGTGCCAAAAGAGCTGAGAAGG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGAGTCATGCCTAAGATaGGGAAAGCAGGTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSESCLR*GKQVST Trigger: TGTGCTCACCTGCTTTCCCCATCTTAGGCATGACTC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCAGGGATCTGAGACCTaGGACTTAAAAGGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSQGSET*DLKGES Trigger: AGACTCACCTTTTAAGTCTCAGGTCTCAGATCCCTG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCAGTGTCTGCAGGAGTaGAAAGCACTATGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSQCLQE*KALWMK Trigger: CTTCATCCATAGTGCTTTTCACTCCTGCAGACACTG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACAGTGTCTGCAGGAGTaGAAAGCACTATGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSQCLQE*KALWMK Trigger: CTTCATCCATAGTGCTTTTCACTCCTGCAGACACTG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCTTGCCATCAGGGCTaGTGGTGCTATGCAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSCHQG*WCYAKV Trigger: AACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCTCTTGCCATCAGGGCTaGTGGTGCTATGCAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFSCHQG*WCYAKV Trigger: AACTTTTGCATAGCACCAGCAGCCCTGATGGCAAGA...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTAGGAGGAGAGACTGCTaGCAGGTTGAAGTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSRRRDC*QVEVLR Trigger: TCTAAGAACTTCAACCTGGCAGCAGTCTCTCCTCCT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTATGCCACTTTCACTCTaGTCAGTGTCTTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSMPLSL*SVSSLE Trigger: CTCCAGTGAAGACACTGACCAGAGTGAAAGTGGCAT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAATACTGGAACCTCTGTaGAGTGCCAGGTATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSILEPL*SARYEL Trigger: AAGTTCATACCTGGCACTTCACAGAGGTTCCAGTAT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTATACTGGAACCTCTGTaGAGTGCCAGGTATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSILEPL*SARYEL Trigger: AAGTTCATACCTGGCACTTCACAGAGGTTCCAGTAT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATACTGGAACCTCTGTaGAGTGCCAGGTATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFILEPL*SARYEL Trigger: AAGTTCATACCTGGCACTTCACAGAGGTTCCAGTAT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACCACGCCTCTGTTCTaGCATTTATGCTTGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFTTPLF*HLCLVN Trigger: ATTCACCAAGCATAAATGTCAGAACAGAGGCGTGGT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTAAAGCTGTTCATCTTTaGTGCTTCCGTCGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSKAVHL*CFRRQQ Trigger: TTGCTGACGACGGAAGCAGCAAAGATGAACAGCTTT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAAGCTGTTCATCTTTaGTGCTTCCGTCGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFKAVHL*CFRRQQ Trigger: TTGCTGACGACGGAAGCAGCAAAGATGAACAGCTTT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAAAGCTGTTCATCTTTaGTGCTTCCGTCGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSKAVHL*CFRRQQ Trigger: TTGCTGACGACGGAAGCAGCAAAGATGAACAGCTTT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACCACAGAGCAGGAACTaGAAGGATTCTTTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSPQSRN*KDSLTL Trigger: CAGAGTTAAAGAATCCTTCCAGTTCCTGCTCTGTGG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTCTCCTCATCCAGATaGTTGCTTTGCAATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVSSSR*LLCNVS Trigger: TGACACATTGCAAAGCAACCATCTGGATGAGGAGAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGTCTCCTCATCCAGATaGTTGCTTTGCAATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSVSSSR*LLCNVS Trigger: TGACACATTGCAAAGCAACCATCTGGATGAGGAGAC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTTACAGAACAAGAATTaGGACTTCCTGGCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSLQNKN*DFLAAD Trigger: GTCAGCTGCCAGGAAGTCCCAATTCTTGTTCTGTAA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGTATTTGACTTTCTGTaGAAGGAGGAGAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSVFDFL*KEERLL Trigger: CAGCAGTCTCTCCTCCTTCCACAGAAAGTCAAATAC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGAGCTATTTTTCTCTaGCAATCTGACATACGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSRAIFL*QSDIRR Trigger: CCGTCGTATGTCAGATTGTCAGAGAAAAATAGCTCT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGATTTCAGGAGGACTTaGTTTTCACTGTCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFDFRRT*FSLSSP Trigger: TGGTGATGACAGTGAAAAGCAAGTCCTCCTGAAATC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGATTTCAGGAGGACTTaGTTTTCACTGTCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSDFRRT*FSLSSP Trigger: TGGTGATGACAGTGAAAAGCAAGTCCTCCTGAAATC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCCAGATGGTTGCTTTaGAATGTGTCACAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSRWLL*NVSQGK Trigger: CTTTCCTTGTGACACATTGCAAAGCAACCATCTGGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGTTTGGGGTACTATTTaGTGGCAAGTTACTATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSVWGTI*WQVTMR Trigger: ACGCATAGTAACTTGCCAGCAAATAGTACCCCAAAC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTATCTTCTTCAGGAGCTaGCCGGTTTTTAAATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSIFFRS*PVFKFQ Trigger: CTGGAATTTAAAAACCGGCCAGCTCCTGAAGAAGAT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGAAGCAAATCCCAAATaGCAATTGTCCCAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSEANPK*QLSQKS Trigger: TGACTTCTGGGACAATTGCCATTTGGGATTTGCTTC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGAAGCAAATCCCAAATaGCAATTGTCCCAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSEANPK*QLSQKS Trigger: TGACTTCTGGGACAATTGCCATTTGGGATTTGCTTC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGAAGCAAATCCCAAATaGCAATTGTCCCAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFEANPK*QLSQKS Trigger: TGACTTCTGGGACAATTGCCATTTGGGATTTGCTTC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCAACATCAAGTATCTaGGAGATGTTTTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSTSSI*EMFSPV Trigger: GACTGGAGAAAACATCTCTCAGATACTTGATGTTGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGCAAGTTACTATGCGTaGGATCATTTACAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSASYYA*DHLQNK Trigger: CTTGTTCTGTAAATGATCTCACGCATAGTAACTTGC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGTACAAGAATGTATTTaGCTTTCTGTGGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSVQECI*LSVEGG Trigger: TCCTCCTTCCACAGAAAGTCAAATACATTCTTGTAC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTCGAGCAAGTGTCCTaGTGTATTCCTTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVEQVS*CIPFSK Trigger: TTTTGAAAAAGGAATACAGCAGGACACTTGCTCGAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGTCGAGCAAGTGTCCTaGTGTATTCCTTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSVEQVS*CIPFSK Trigger: TTTTGAAAAAGGAATACAGCAGGACACTTGCTCGAC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTACTGATTGATTCTTaGCCTTTTCGATGCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLLIDS*PFRCLP Trigger: TGGTAAGCATCGAAAAGGGCAAGAATCAATCAGTAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGCTGGCAAGTTACTATaGGTGAGATCATTTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSAGKLL*VRSFTE Trigger: TTCTGTAAATGATCTCACGCATAGTAACTTGCCAGC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTTTATAGATTCAGAGTaGCTTAGCTGTGAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSFIDSE*LSCEEA Trigger: AGCTTCCTCACAGCTAAGCCACTCTGAATCTATAAA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATTTATAGATTCAGAGTaGCTTAGCTGTGAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSFIDSE*LSCEEA Trigger: AGCTTCCTCACAGCTAAGCCACTCTGAATCTATAAA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCGTCAGCAAATGTCATaGTTTGTATTTGTTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFRQQMS*FVFVDC Trigger: GCAATCAACAAATACAAATCATGACATTTGCTGACG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGAATTTCATCTTCCTaGAGAGGTTCATTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFRISSS*RGSFLS Trigger: TGAGAGAAATGAACCTCTTCAGGAAGATGAAATTCT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACTGTTTACTGTTATTaGCAAGACTGTTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFTVYCY*QDCLCL Trigger: GAGACACAAACAGTCTTGTCAATAACAGTAAACAGT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGCATTTCCACAAAGCTaGTTTTCTCTGAAAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSAFPQS*FSLKVN Trigger: ATTCACTTTCAGAGAAAATCAGCTTTGTGGAAATGC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGCATTTCCACAAAGCTaGTTTTCTCTGAAAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSAFPQS*FSLKVN Trigger: ATTCACTTTCAGAGAAAATCAGCTTTGTGGAAATGC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTTTGTATTTGTTGATTaGAAAAGGTCCCAGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSFVFVD*KRSQCY Trigger: GTAGCACTGGGACCTTTTGCAATCAACAAATACAAA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCTTTGTATTTGTTGATTaGAAAAGGTCCCAGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFFVFVD*KRSQCY Trigger: GTAGCACTGGGACCTTTTGCAATCAACAAATACAAA...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATTTGTATTTGTTGATTaGAAAAGGTCCCAGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSFVFVD*KRSQCY Trigger: GTAGCACTGGGACCTTTTGCAATCAACAAATACAAA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGTTGAAGTTCTTAGATaGACCAAGAATTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSVEVLR*TKNFIF Trigger: GAAGATGAAATTCTTGGTCCATCTAAGAACTTCAAC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGCTGCCTTCTCAGGGTaGGCCCTGGACGGTACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFAAFSG*ALDGTL Trigger: AAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGCTGCCTTCTCAGGGTaGGCCCTGGACGGTACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSAAFSG*ALDGTL Trigger: AAGCGTACCGTCCAGGGCCAACCCTGAGAAGGCAGC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
||
| CDS CCA 90 bp | CTTTGCAATGTGTCACAAGGAAAGCCTTTATTTATAGATTCAGAGTaGCTTAGCTGTGAGGAAGCTTCTGGCTGGGGCACACCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCNVSQGKPLFIDSE*LSCEEASGWGTPSS Trigger: AGAAGATGGTGTGCCCCAGCCAGAAGCTTCCTCACAGCTAAGCCACTCTGAATCTATAAATAAAGGCTTTCCTTGTGACACATTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098068.10 ENSMUST00000106468.7 ENSMUST00000106469.8 |
||
| CDS CCA 90 bp | TTATTTATAGATTCAGAGTGGCTTAGCTGTGAGGAAGCTTCTGGCTaGGGCACACCATCTTCTATGGCTTTCTTAGAGTTCTTAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFIDSEWLSCEEASG*GTPSSMAFLEFLAF Trigger: GAAGGCTAAGAACTCTAAGAAAGCCATAGAAGATGGTGTGCCCCAGCCAGAAGCTTCCTCACAGCTAAGCCACTCTGAATCTATAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098068.10 ENSMUST00000106468.7 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACAACAGGTAGAGGTGTaGCTTGGGGGCCAGAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSQQVEV*LGGQSH Trigger: GTGACTCTGGCCCCCAAGCAACACCTCTACCTGTTG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGTGTTCTGCTCTTTCTaGCCATCAGGGCTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFVFCSF*PSGLLV Trigger: CACCAGCAGCCCTGATGGCAAGAAAGAGCAGAACAC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCGTCTCCGAATCTCTTaGCAGTTCCTCCAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFRLRIS*QFLQSS Trigger: GCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCGTCTCCGAATCTCTTaGCAGTTCCTCCAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSRLRIS*QFLQSS Trigger: GCTGCTCTGGAGGAACTGCAAAGAGATTCGGAGACG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGATGAAGAAAGGTCCTaGCTCCCTGGCTGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFDEERS*LPGCLL Trigger: GAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCATC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGATGAAGAAAGGTCCTaGCTCCCTGGCTGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSDEERS*LPGCLL Trigger: GAGAAGGCAGCCAGGGAGCAAGGACCTTTCTTCATC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCCCAAGAGAGGAGGTaGGGATGTAGAGCAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSQERR*GCRARL Trigger: CAGCCTTGCTCTACATCCCAACCTCCTCTCTTGGGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGCTTCCTGCGTCCCTaGGACTTCAGCAAAAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFSFLRP*DFSKSQ Trigger: CTGACTTTTGCTGAAGTCCAAGGGACGCAGGAAGCT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAATCCCAAATGGCAATaGTCCCAGAAGTCAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSNPKWQ*SQKSGL Trigger: CAGTCCTGACTTCTGGGACAATTGCCATTTGGGATT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTAATCCCAAATGGCAATaGTCCCAGAAGTCAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSNPKWQ*SQKSGL Trigger: CAGTCCTGACTTCTGGGACAATTGCCATTTGGGATT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGGTGCTATGCAAAAGTaGTCCTTGAATGTCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSGAMQK*SLNVTC Trigger: GCAGGTGACATTCAAGGACAACTTTTGCATAGCACC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCTCTTTGGCACAAGGTaGACTCACAACAACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSLFGTR*THNNKQ Trigger: CTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCACTCTTTGGCACAAGGTaGACTCACAACAACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSLFGTR*THNNKQ Trigger: CTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAG...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCTCTTTGGCACAAGGTaGACTCACAACAACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFLFGTR*THNNKQ Trigger: CTGTTTGTTGTTGTGAGTCAACCTTGTGCCAAAGAG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCCTCATCCAGATGGTaGCTTTGCAATGTGTCACAA | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSSSRW*LCNVSQ Trigger: TTGTGACACATTGCAAAGCAACCATCTGGATGAGGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGACACCCAAATGACTTaGAATTACAGCTTCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSDTQMT*NYSFQS Trigger: GCTCTGGAAGCTGTAATTCAAAGTCATTTGGGTGTC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTGAGCAGGCTGAACTGTaGCACTGTTTACTGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSEQAEL*HCLLLL Trigger: CAATAACAGTAAACAGTGCAACAGTTCAGCCTGCTC...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGAGCAGGCTGAACTGTaGCACTGTTTACTGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSEQAEL*HCLLLL Trigger: CAATAACAGTAAACAGTGCAACAGTTCAGCCTGCTC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTATCCAGATGGTTGCTTaGCAATGTGTCACAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSIQMVA*QCVTRK Trigger: TTTCCTTGTGACACATTGCAAAGCAACCATCTGGAT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCCAGATGGTTGCTTaGCAATGTGTCACAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFIQMVA*QCVTRK Trigger: TTTCCTTGTGACACATTGCAAAGCAACCATCTGGAT...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAATTCCCCTTTCTGATTaGCCAGATGGCGGAATTAAT | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSIPLSD*PDGGIN Trigger: ATTAATTCCGCCATCTGGCAAATCAGAAAGGGGAAT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATCTCACCACAGTTTTTaGAGTCAGGAGACTCAATCA | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSHHSF*SQETQS Trigger: TGATTGAGTCTCCTGACTCAAAAAACTGTGGTGAGA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTCTCACCACAGTTTTTaGAGTCAGGAGACTCAATCA | + |
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Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSSHHSF*SQETQS Trigger: TGATTGAGTCTCCTGACTCAAAAAACTGTGGTGAGA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAGAATGTCACCTGCTCTaGGTGTATGTAATACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSECHLL*VYVILL Trigger: AAGAAGTATTACATACACCAAGAGCAGGTGACATTC...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCGAATGTCACCTGCTCTaGGTGTATGTAATACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFECHLL*VYVILL Trigger: AAGAAGTATTACATACACCAAGAGCAGGTGACATTC...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTACAAGAATGTATTaGACTTTCTGTGGAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSSTRMY*TFCGRR Trigger: CCTCCTTCCACAGAAAGTCAAATACATTCTTGTACT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAACCGCCTTAGTAGCTTaGGTTTTCTTTTTAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSTALVA*VFFLSS Trigger: AGAGCTTAAAAAGAAAACCAAAGCTACTAAGGCGGT...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCCATGATTTGTATTTGTaGATTGCAAAAGGTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSHYQKKIKCVGNTFHDLYL*IAKGPS Trigger: ACTGGGACCTTTTGCAATCAACAAATACAAATCATG...GAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTCATGATTTGTATTTGTaGATTGCAAAAGGTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSHDLYL*IAKGPS Trigger: ACTGGGACCTTTTGCAATCAACAAATACAAATCATG...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTTGTCATGATTTGTATTaGTTGATTGCAAAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSCHDLY*LIAKGP Trigger: GGGACCTTTTGCAATCAACAAATACAAATCATGACA...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCATGTCATGATTTGTATTaGTTGATTGCAAAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQSVVTIRRKLSVWEIHSCHDLY*LIAKGP Trigger: GGGACCTTTTGCAATCAACAAATACAAATCATGACA...TGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063587.13 ENSMUST00000098068.10 ENSMUST00000106469.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGTAGTCACTATCAGAAGAAAATTAAGTGTGTGGGAAATACATTCAAGTAAATATAGTCATTTTTaGGTCTTGTGCCACCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QSVVTIRRKLSVWEIHSSKYSHF*VLCHQV Trigger: AACCTGGTGGCACAAGACCAAAAAATGACTATATTT...ACTTGAATGTATTTCCCACACACTTAATTTTCTTCTGATAGTGACTACTGACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098068.10 |
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| CDS TCA 72 bp | AGATTGTCACAAGCAGGGCGATCTGCAGTTTCAGTCTaGAGTCGAGCAAGTGTCCTGCTGTATTCCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLSQAGRSAVSV*SRASVLLYSFF Trigger: GAAAAAGGAATACAGCAGGACACTTGCTCGACTTCAGACTGAAACTGCAGATCGCCCTGCTTGTGACAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063587.13 |
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| CDS CCA 72 bp | GTGTCACAAGGAAAGCCTTTATTTATAGATTCAGAGTaGCTTAGCTGTGAGGAAGCTTCTGGCTGGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VSQGKPLFIDSE*LSCEEASGWGT Trigger: TGTGCCCCAGCCAGAAGCTTCCTCACAGCTAAGCCACTCTGAATCTATAAATAAAGGCTTTCCTTGTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098068.10 ENSMUST00000106468.7 ENSMUST00000106469.8 |
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| CDS CAA 90 bp | TATCTGAGAGATGTTTTCTCCAGTCTCCTCATCCAGATGGTTGCTTaGCAATGTGTCACAAGGAAAGCCTTTATTTATAGATTCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: YLRDVFSSLLIQMVA*QCVTRKAFIYRFRV Trigger: CACTCTGAATCTATAAATAAAGGCTTTCCTTGTGACACATTGCAAAGCAACCATCTGGATGAGGAGACTGGAGAAAACATCTCTCAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098068.10 ENSMUST00000106468.7 ENSMUST00000106469.8 |
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| CDS GCA 72 bp | ATGTTTTCTCCAGTCTCCTCATCCAGATGGTTGCTTTaGAATGTGTCACAAGGAAAGCCTTTATTTATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MFSPVSSSRWLL*NVSQGKPLFID Trigger: ATCTATAAATAAAGGCTTTCCTTGTGACACATTGCAAAGCAACCATCTGGATGAGGAGACTGGAGAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098068.10 ENSMUST00000106468.7 ENSMUST00000106469.8 |
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