Pregenerated sensors for PAK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074923Ensembl transcript IDs: ENSMUST00000099557.10, ENSMUST00000110853.8
Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTaGCCATCCCTCGCTCGGCATGAGGGACCCCCTCCGGGAGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GSINRTAGAAGSQRR*PSLARHEGPPPGGG Trigger: ACCACCTCCCGGAGGGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR TCA 90 bp | CCCCCTCCGGGAGGTGGTTCACCTTTCTGTCCCAGCCCAGGGTTCTaGAAAGGAGGGGTCCCTGATCTGGCCGCTAAGAAGTTGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: PPPGGGSPFCPSPGF*KGGVPDLAAKKLLT Trigger: TGTCAGCAACTTCTTAGCGGCCAGATCAGGGACCCCTCCTTTTCAGAACCCTGGGCTGGGACAGAAAGGTGAACCACCTCCCGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR TCA 90 bp | GGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTaGGAGGGCAAGGCGGGTAGGCCTTGCCAATGGAACGGCTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GGKVRSFTFDLWREH*EGKAGRPCQWNGCP Trigger: TGGACAGCCGTTCCATTGGCAAGGCCTACCCGCCTTGCCCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR GCA 90 bp | CCTCTTGGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTaGAGCAGCCTGTCGGCTTTGCTGGCTTGCGGCCAAGAGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: PLGCPRSLWTLPLKI*SSLSALLACGQEHH Trigger: GTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACCAAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | CTAGGGCGAGGCAGTGCCAGGGAACAGACAGGAAACAGGTGCAAGTaGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LGRGSAREQTGNRCK*GFQKSDQRRKKDSG Trigger: GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTGTCTGTTCCCTGGCACTGCCTCGCCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR GCA 90 bp | GGTTTTCTAGGGCGAGGCAGTGCCAGGGAACAGACAGGAAACAGGTaGAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: GFLGRGSAREQTGNR*KWGFQKSDQRRKKD Trigger: ATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTGTCTGTTCCCTGGCACTGCCTCGCCCTAGAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | GCTCTTCTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTaGGGGAAGTTTACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: ALLRLSVGDWKDLGH*GKFTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAGAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR TCA 90 bp | CTTGGTAGAAAAGAGGTGGACAGCTCTTCTGAGGCTCTCTGTGGGTaGCTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: LGRKEVDSSSEALCG*LEGPGPLGEVYTHT Trigger: TGTGTGTGTGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR GCA 90 bp | ACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCTTTGCTGGCTTaGGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TLPLKICSSLSALLA*GQEHHSPRFLETSL Trigger: CAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | TTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATGCACCCTCTTaGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LRIASVHVEMEHAPS*LPQVTVDTAFKNLQ Trigger: CTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTCCATCTCCACATGGACACTTGCTATTCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | TCCAAAAAGCAGATTCCTTCAGAATGGAGCTTGGTAGAAAAGAGGTaGACAGCTCTTCTGAGGCTCTCTGTGGGTGACTGGAAGGACCTG | + |
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Preference number: 1 (lower is better) Translates to: SKKQIPSEWSLVEKR*TALLRLSVGDWKDL Trigger: CAGGTCCTTCCAGTCACCCACAGAGAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTGCTTTTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | CTAAAAATATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTaGCATTCCCTGTCTCACAACAGCCAGGAAGGTGGGAAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: LKILSGSGPDTRVLP*HSLSHNSQEGGKGG Trigger: CCCTCCCTTCCCACCTTCCTGGCTGTTGTGAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATATTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CCA 90 bp | CTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATaGAGCTTGGTAGAAAAGAGGTGGACAGCTCTTCTGAGGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LERQKARSKKQIPSE*SLVEKRWTALLRLS Trigger: AGAGAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGGGGGCAGGTCCGGCCTaGCCCAGCGGGCAAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRRQGSINRTAGAAGSQRGAGPA*PSGQKG Trigger: GCCCTTTTGCCCGCTGGGCCAGGCCGGACCTGCCCC...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGGGGGCAGGTCCGGCCTaGCCCAGCGGGCAAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QETGASGASRSQTRGGRRGAGPA*PSGQKG Trigger: GCCCTTTTGCCCGCTGGGCCAGGCCGGACCTGCCCC...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTGCGAGGCTCTCTGTGGGTaGCTGGAAGGACCTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQGSINRTAGAAGSQRRCEALCG*LEGPGP Trigger: TGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTC...GCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCCTGTGGGCACAGGTaGCAGGTGCACCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GCPRSLWTLPLKICSSLSACGHR*QVHPGC Trigger: GCACCCAGGGTGCACCTGCCACCTGTGCCCACAGGC...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGCTGTCCAGTGTCCTTTaGCTGTGGGCACAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RRQGSINRTAGAAGSQRRLSSVL*LWAQVA Trigger: TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAG...CCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACAGGGCAGGAGGGAAGGTaGGGAGCTTCACATTCGATC | + |
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Preference number: 2 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTGQEGR*GASHSI Trigger: GATCGAATGTGAAGCTCCGCACCTTCCCTCCTGCCC...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGATGCACCCTCTTGGTTaGCCCAGGTCACTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: RRQGSINRTAGAAGSQRRMHPLG*PRSLWT Trigger: TGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCAT...CCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGCATGCACCCTCTTaGTTGCCCCAGGTCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEEHAPS*LPQVTV Trigger: CACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTC...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGTCTAGGGCGAGGCAGTaGCAGGGAACAGACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VKEAGKYQQDSWGSRLTESRARQ*QGTDRK Trigger: TTTCCTGTCTGTTCCCTGGCACTGCCTCGCCCTAGA...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTGCGGAAACAGGTGCAAGTaGGGCTTCCAGAAGTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: RQGSINRTAGAAGSQRRCGNRCK*GFQKSD Trigger: GTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCC...GCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGCAGACAGGAAACAGGTaGAAGTGGGGCTTCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEQTGNR*KWGFQK Trigger: CTTCTGGAAGCCCCACTTGCACCTGTTTCCTGTCTG...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACCCTGGCTGCTCTCATaGTCTACACACAGGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTPWLLS*STHRLF Trigger: GAATAGCCTGTGTGTAGACCATGAGAGCAGCCAGGG...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGGCCTGTGGGCACAGGTaGCAGGTGCACCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: MRLERQKARSKKQIPSEWACGHR*QVHPGC Trigger: GCACCCAGGGTGCACCTGCCACCTGTGCCCACAGGC...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTTGTGGAGATGGAGCATaGACCCTCTTGGTTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPCGDGA*TLLVAP Trigger: TGGGGCAACCAAGAGGGTGCATGCTCCATCTCCACA...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGTGCCCCAGGTCACTGTaGACACTGCCTTTAAAAATC | + |
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Preference number: 2 (lower is better) Translates to: VKEAGKYQQDSWGSRLTECPRSL*TLPLKI Trigger: GATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCA...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CAA 90 bp | GACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCTTTGCTGGCTaGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCT | + |
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Preference number: 2 (lower is better) Translates to: DTAFKNLQQPVGFAG*RPRAPLSAFLRNIP Trigger: AGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CAA 90 bp | TCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCTTaGCTGGCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLWTLPLKICSSLSA*LACGQEHHSPRFLE Trigger: TTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTGCTTCCCTTACTATTCCTaGCTCAGTATGGGAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: RQGSINRTAGAAGSQRRCFPYYS*LSMGET Trigger: AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAA...GCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAAGTGTCCATGTGGAGATaGAGCATGCACCCTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SGASRSQTRGGRRIQAAKVSMWR*SMHPLG Trigger: ACCAAGAGGGTGCATGCTCCATCTCCACATGGACAC...TTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTGAGGCTCTCTGTGGGTaGCTGGAAGGACCTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GNNMRLERQKARSKKQIPEALCG*LEGPGP Trigger: TGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTC...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CAA 90 bp | AGAATAGCAAGTGTCCATGTGGAGATGGAGCATGCACCCTCTTGGTaGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RIASVHVEMEHAPSW*PQVTVDTAFKNLQQ Trigger: CTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTCCATCTCCACATGGACACTTGCTATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATCTGTCCAGTGTCCTTTaGCTGTGGGCACAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QGLKLQLRIASVHVEMEHLSSVL*LWAQVA Trigger: TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAG...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTGGGCAGGAGGGAAGGTaGGGAGCTTCACATTCGATC | + |
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Preference number: 2 (lower is better) Translates to: RERERERMFSTSWTMEPRGQEGR*GASHSI Trigger: GATCGAATGTGAAGCTCCGCACCTTCCCTCCTGCCC...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTTCGGCTTTGCTGGCTTaGGGCCAAGAGCACCACTCT | + |
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Preference number: 2 (lower is better) Translates to: RERERERMFSTSWTMEPRSALLA*GQEHHS Trigger: AGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGA...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGATGTTCTCTACATCCTaGACAATGGAACCACGTTTA | + |
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Preference number: 2 (lower is better) Translates to: SRRQGSINRTAGAAGSQRMFSTS*TMEPRL Trigger: TAAACGTGGTTCCATTGTCCAGGATGTAGAGAACAT...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR CAA 90 bp | AGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGAGCTaGGTAGAAAAGAGGTGGACAGCTCTTCTGAGGCTCTCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RQKARSKKQIPSEWS*VEKRWTALLRLSVG Trigger: ACCCACAGAGAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTGAGCATGCACCCTCTTaGTTGCCCCAGGTCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: GNNMRLERQKARSKKQIPEHAPS*LPQVTV Trigger: CACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTC...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTCAGACAGGAAACAGGTaGAAGTGGGGCTTCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GNNMRLERQKARSKKQIPQTGNR*KWGFQK Trigger: CTTCTGGAAGCCCCACTTGCACCTGTTTCCTGTCTG...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGTTGGTAGAAAAGAGGTaGACAGCTCTTCTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: MRLERQKARSKKQIPSEWLVEKR*TALLRL Trigger: GAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAA...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTATGCACCCTCTTGGTTaGCCCAGGTCACTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: QVKQSLFPYYSCLSMGETMHPLG*PRSLWT Trigger: TGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCAT...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR GCA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCTTCCCTTACTATTCCTaGCTCAGTATGGGAGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLFPYYS*LSMGET Trigger: AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAA...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTGTGTCCATGTGGAGATaGAGCATGCACCCTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QVKQSLFPYYSCLSMGETVSMWR*SMHPLG Trigger: ACCAAGAGGGTGCATGCTCCATCTCCACATGGACAC...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCCCTGGCTGCTCTCATaGTCTACACACAGGCTATTC | + |
|
Preference number: 2 (lower is better) Translates to: QVKQSLFPYYSCLSMGETPWLLS*STHRLF Trigger: GAATAGCCTGTGTGTAGACCATGAGAGCAGCCAGGG...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGGCTGTCCAGTGTCCTTaGCCTGTGGGCACAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AKPAEGVTVIPKATGTLGAVQCP*PVGTGG Trigger: GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGC...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCTGTCCAGTGTCCTTaGCCTGTGGGCACAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCPRSLWTLPLKICSSLSAVQCP*PVGTGG Trigger: GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGC...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGAGCAGCCTGTCGGCTTaGCTGGCTTGCGGCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QETGASGASRSQTRGGRRSSLSA*LACGQE Trigger: CTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCT...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTAGCAGCCTGTCGGCTTaGCTGGCTTGCGGCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPSSLSA*LACGQE Trigger: CTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCT...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR TCA 72 bp | GGAGGTGGTTCACCTTTCTGTCCCAGCCCAGGGTTCTaGAAAGGAGGGGTCCCTGATCTGGCCGCTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGGSPFCPSPGF*KGGVPDLAAKK Trigger: CTTCTTAGCGGCCAGATCAGGGACCCCTCCTTTTCAGAACCCTGGGCTGGGACAGAAAGGTGAACCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR GCA 72 bp | TGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTaGAGCAGCCTGTCGGCTTTGCTGGCTTGCGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CPRSLWTLPLKI*SSLSALLACGQ Trigger: TTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | AGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTaGGGGAAGTTTACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RLSVGDWKDLGH*GKFTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR TCA 72 bp | GTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTaGGAGGGCAAGGCGGGTAGGCCTTGCCAATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VRSFTFDLWREH*EGKAGRPCQWN Trigger: GTTCCATTGGCAAGGCCTACCCGCCTTGCCCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGCCTTCAGAATGGAGCTaGGTAGAAAAGAGGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEPSEWS*VEKRWT Trigger: TGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGG...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR GCA 72 bp | TTAAAAATCTGCAGCAGCCTGTCGGCTTTGCTGGCTTaGGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKICSSLSALLA*GQEHHSPRFLE Trigger: TTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR GCA 72 bp | GTGTCCATGTGGAGATGGAGCATGCACCCTCTTGGTTaGCCCAGGTCACTGTGGACACTGCCTTTAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: VSMWRWSMHPLG*PRSLWTLPLKI Trigger: GATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTCCATCTCCACATGGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | TTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTaGCATTCCCTGTCTCACAACAGCCAGGAAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSGSGPDTRVLP*HSLSHNSQEGG Trigger: CCCACCTTCCTGGCTGTTGTGAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTCTGGGACTCCAGGGTTaGAAGCTTCAGTTGAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPLGLQG*KLQLRI Trigger: TATTCTCAACTGAAGCTTCAAACCCTGGAGTCCCAG...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | CAGATTCCTTCAGAATGGAGCTTGGTAGAAAAGAGGTaGACAGCTCTTCTGAGGCTCTCTGTGGGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QIPSEWSLVEKR*TALLRLSVGDW Trigger: CCAGTCACCCACAGAGAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR GCA 72 bp | AGAAACATCCCTGTGCAAATAACAAAGGGCCAAACCTaGAGAAGGGGTCACTGTCATCCCAAAGGCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RNIPVQITKGQT*RRGHCHPKGNW Trigger: CCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGCCCTTTGTTATTTGCACAGGGATGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | GAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATaGAACCACGTTTACTGCCAACCCCACTCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ERERECSLHPGQ*NHVYCQPHSLS Trigger: TGAGAGAGAGTGGGGTTGGCAGTAAACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTaGACAATGGAACCACGTTTACTGCCAACCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RERERERMFSTS*TMEPRLLPTPL Trigger: GAGTGGGGTTGGCAGTAAACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR TCA 72 bp | TATTCCTGCCTCAGTATGGGAGAAACTCAGAAACTTTaGGGGCCCCCAGCATGTGTTAGACTTGACATACAC | + |
|
Preference number: 3 (lower is better) Translates to: YSCLSMGETQKL*GPPACVRLDIH Trigger: GTGTATGTCAAGTCTAACACATGCTGGGGGCCCTCAAAGTTTCTGAGTTTCTCCCATACTGAGGCAGGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | CAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATaGAGCTTGGTAGAAAAGAGGTGGACAGCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QKARSKKQIPSE*SLVEKRWTALL Trigger: CAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTCTTCACATTCGATCTTaGGAGAGAACACTGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GNNMRLERQKARSKKQIPLHIRS*ERTLRG Trigger: CCCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAG...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR TCA 72 bp | AAGGAGGGGTCCCTGATCTGGCCGCTAAGAAGTTGCTaGCAGGTAAAACAAAGTTTATTCCCTTACTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KEGSLIWPLRSC*QVKQSLFPYYS Trigger: GGAATAGTAAGGGAATAAACTTTGTTTTACCTGTCAGCAACTTCTTAGCGGCCAGATCAGGGACCCCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTGGTTTGAAGCTTCAGTaGAGAATAGCAAGTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RERERERMFSTSWTMEPRGLKLQ*RIASVH Trigger: ATGGACACTTGCTATTCTCAACTGAAGCTTCAAACC...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CCA 72 bp | AACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATaGGAGAAACTCAGAAACTTTGAGGGCCCCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NKVYSLTIPASV*EKLRNFEGPQH Trigger: ATGCTGGGGGCCCTCAAAGTTTCTGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTGGTTTGAAGCTTCAGTaGAGAATAGCAAGTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QVKQSLFPYYSCLSMGETGLKLQ*RIASVH Trigger: ATGGACACTTGCTATTCTCAACTGAAGCTTCAAACC...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGCAGGCTCACAGAGGAGGTGCCCATCCCTCGCTCGGCATGAGGGACCCCCCGGGTGGGGAACTCTaGAGGCAGGCACCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQQAHRGGAHPSLGMRDPPGGEL*RQAPSC Trigger: GCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGG...GGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCC 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCAGGCTCACAGAGGAGGTGCCCATCCCTCGCTCGGCATGAGGGACCCCCCCGCAGCCTCTTCATaGCTTGCACTGGGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQQAHRGGAHPSLGMRDPPAASS*LALGSH Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTGCGGG...GGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCC 67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGCCGGCTGGTGGGGCTaGGTCCACGCAGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEAGWWG*VHAGCW Trigger: CCAACACCCTGCGTGGACGCAGCCCCACCAGCCGGC...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACAGCCGGCTGGTGGGGCTaGGTCCACGCAGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTAGWWG*VHAGCW Trigger: CCAACACCCTGCGTGGACGCAGCCCCACCAGCCGGC...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACCGGGTGGGGAACTCTaGAGGCAGGCACCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTPGGEL*RQAPSC Trigger: GCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGG...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGCGGCTTGCTGCTGCTTaGCGCGCCTGTGGCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQGSINRTAGAAGSQRRRLAAA*RACGRS Trigger: ACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCG...CCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCACCCCCTTGGCCACTGTaGGGTCCTGGGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPMERLSSVLCLWAQVAPPWPL*GPGAGR Trigger: TCTACCTGCCCCAGGACCCCACAGTGGCCAAGGGGG...TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGGGGTCAGCAGCCCACTaGTCATCTCCCAGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGGSAAH*SSPSSP Trigger: GGGGCTGCTGGGAGATGATCAGTGGGCTGCTGACCC...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCAGGTGGTCAGAGGACTaGAGGTCCCCATGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGRWSED*RSPWAA Trigger: AGCAGCCCATGGGGACCTTCAGTCCTCTGACCACCT...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCAGGCTCACAGAGGAGGTGCCCATCCCTCGCTCGGCATGAGGGACCCCACTGTCTTCATGGGCTaGAACTGCACCCGTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GQQAHRGGAHPSLGMRDPTVFMG*NCTRVI Trigger: AATCACACGGGTGCAGTTGCAGCCCATGAAGACAGT...GGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCACTTCTCCACCTGGCCTaGCAATGGCGGAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPMERLSSVLCLWAQVALLHLA*QWRSPP Trigger: TGGTGGGCTCCGCCATTGGCAGGCCAGGTGGAGAAG...TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACGGCTTGCTGCTGCTTaGCGCGCCTGTGGCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTRLAAA*RACGRS Trigger: ACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCG...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCCGTTGTGAGGCACCCTaGAACTCAGCAGGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGRCEAP*NSAGPS Trigger: ACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACG...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGGAAGCTCCTGGGCCGTaGCTCGCTCTTGGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGEAPGP*LALGVP Trigger: GGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTC...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAACCCACCAGGCAGGACTaGGGCCGGGCCTCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACGQEHHSPRFLETSLCKPTRQD*GRASSE Trigger: CTCCGAAGAGGCCCGGCCTCAGTCCTGCCTGGTGGG...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGTTGCTGGTGCTGATCTaGGCATGCCGGGTACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKEAGKYQQDSWGSRLTELLVLI*ACRVRG Trigger: CCCCCGTACCCGGCATGCTCAGATCAGCACCAGCAA...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGACCTGGCGACCTGAGTaGTTCTCCCGGGCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRQGSINRTAGAAGSQRTWRPE*FSRARH Trigger: GTGTCTGGCCCGGGAGAAGCACTCAGGTCGCCAGGT...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCGGGTCAGCAGCCCACTaGTCATCTCCCAGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGGSAAH*SSPSSP Trigger: GGGGCTGCTGGGAGATGATCAGTGGGCTGCTGACCC...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGAGTTGCTGGTGCTGATCTaGGCATGCCGGGTACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTCRRGHCHPKGNWDSGELLVLI*ACRVRG Trigger: CCCCCGTACCCGGCATGCTCAGATCAGCACCAGCAA...CTCCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCAGAGGTGTGGACACGATaGTGGAAGTTCTGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPMERLSSVLCLWAQVAEVWTR*WKFCGA Trigger: AGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTC...TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAAGGTCCCCATGGGCTaGTCTGAGGGCAAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQGSINRTAGAAGSQRKVPMG*SEGKDW Trigger: CCAGTCCTTGCCCTCAGAGCAGCCCATGGGGACCTT...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTGCGGGACTTCTGGGGGCTaGTGGTATCTGAGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSINRTAGAAGSQRRCGTSGG*WYLRWS Trigger: TGACCACCTCAGATACCAGCAGCCCCCAGAAGTCCC...GCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAACAGCGGCTGGAGCTGTaGGGAGGGACTTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACGQEHHSPRFLETSLCKQRLEL*GGTSGG Trigger: GCCCCCAGAAGTCCCTCCGCACAGCTCCAGCCGCTG...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGCCAGTGACTGCGCCTTaGCAGCCATCCCATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGPVTAP*QPSHWA Trigger: TGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGG...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCGAAGCTCCTGGGCCGTaGCTCGCTCTTGGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGEAPGP*LALGVP Trigger: GGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTC...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCACAGAACCCAAAGTCTaGGAGCTTCACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGTEPKV*ELHPAI Trigger: GATGGCAGGGTGAAGCTCTCAGACTTTGGGTTCTGT...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGGATCCACCACAGGCTTaGGCCGCCTCAGAGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGDPPQA*AASEYP Trigger: TGGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATC...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCTCAGTGTGCTCCGACTaGGGGCTTTGGAGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGSVCSD*GLWRYI Trigger: TATGTACCTCCAAAGCCCCCAGTCGGAGCACACTGA...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAACGGGCTCTGTGGTTCTaGCCAGGGCACCTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ACGQEHHSPRFLETSLCKRALWF*PGHLPV Trigger: CACAGGCAGGTGCCCTGGCCAGAACCACAGAGCCCG...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACTTCGGAGCTATGCTTaGCAACCTTCACCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTLRSYA*QPSPHA Trigger: GGCGTGGGGTGAAGGTTGCCAAGCATAGCTCCGAAG...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGAGCCGAGGGTCACCCTaGTCCACCACCATCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCPRSLWTLPLKICSSLSSRGSP*STTILS Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCTCGGCT...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGAGCCGAGGGTCACCCTaGTCCACCACCATCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QETGASGASRSQTRGGRRSRGSP*STTILS Trigger: GCTCAGGATGGTGGTGGACCAGGGTGACCCTCGGCT...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACAGCAACTGCACCCGTGTaGTTCGAGAAGGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTATAPV*FEKDPP Trigger: TGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGC...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGGCAACTGCACCCGTGTaGTTCGAGAAGGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGATAPV*FEKDPP Trigger: TGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGC...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCACTGTCTTCATGGGCTaGAACTGCACCCGTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGTVFMG*NCTRVI Trigger: AATCACACGGGTGCAGTTGCAGCCCATGAAGACAGT...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTCAGGCACCCAGCTGCTaGAGGCAGCGTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPQAPSC*RQRCEA Trigger: TGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTG...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGCAGGCACCCAGCTGCTaGAGGCAGCGTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEGRCGASHSIFGENTERQAPSC*RQRCEA Trigger: TGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTG...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGAGGCAGGCACCCAGCTaGTGCAGGCAGCGTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEGRCGASHSIFGENTERRQAPS*CRQRCE Trigger: CTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCT...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGCTTCTCCACCTGGCCTaGCAATGGCGGAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QEGRCGASHSIFGENTERLLHLA*QWRSPP Trigger: TGGTGGGCTCCGCCATTGGCAGGCCAGGTGGAGAAG...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGAGAGCAGCTCCCTGCGTTaGTGCTTCCTGAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QTCRRGHCHPKGNWDSGESSSLR*CFLRSI Trigger: GATGGACCTCAGGAAGCAGCAACGCAGGGAGCTGCT...CTCCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCCAAACTTGCCTTCCTTaGGGTCAAAGGAGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLANGTAVQCPLPVGTGGQTCLP*GQRRCG Trigger: TCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTG...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGACTTCTGGGGGCTGCTaGTATCTGAGGTGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGTSGGC*YLRWSE Trigger: CTCTGACCACCTCAGATACCAGCAGCCCCCAGAAGT...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGAAGAGTTCTTTAGCTTaGGTGGGGCGCTGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGKSSLA*VGRCPA Trigger: TGCGGGACAGCGCCCCACCCAAGCTAAAGAACTCTT...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTCCCACCAGGCAGGACTaGGGCCGGGCCTCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RERERERMFSTSWTMEPRPTRQD*GRASSE Trigger: CTCCGAAGAGGCCCGGCCTCAGTCCTGCCTGGTGGG...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGGGGGCTGCTGGTATCTaGGGTGGTCAGAGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QETGASGASRSQTRGGRRGAAGI*GGQRTE Trigger: TTCAGTCCTCTGACCACCTCAGATACCAGCAGCCCC...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR TCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCGGGGCTGCTGGTATCTaGGGTGGTCAGAGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGGAAGI*GGQRTE Trigger: TTCAGTCCTCTGACCACCTCAGATACCAGCAGCCCC...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAAAAGGTCCCCATGGGCTaGTCTGAGGGCAAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGASRSQTRGGRRIQAAKKVPMG*SEGKDW Trigger: CCAGTCCTTGCCCTCAGAGCAGCCCATGGGGACCTT...TTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCAGCTCCCTGCGTTaGTGCTTCCTGAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGSSSLR*CFLRSI Trigger: GATGGACCTCAGGAAGCAGCAACGCAGGGAGCTGCT...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAACGTTGTGAGGCACCCTaGAACTCAGCAGGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACGQEHHSPRFLETSLCKRCEAP*NSAGPS Trigger: ACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACG...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGCTTCGGAGCTATGCTTaGCAACCTTCACCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QETGASGASRSQTRGGRRLRSYA*QPSPHA Trigger: GGCGTGGGGTGAAGGTTGCCAAGCATAGCTCCGAAG...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCCACCTGGCCTGCCAATaGCGGAGCCCACCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLHLACQ*RSPPGR Trigger: CCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGGTG...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGATCTTGACTGCTACCTaGCGACCTGAGTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEILTAT*RPECFS Trigger: GGAGAAGCACTCAGGTCGCCAGGTAGCAGTCAAGAT...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGCTTCATGGCTTGCACTaGGGAGTCACTGAAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKPAEGVTVIPKATGTLGLHGLH*GVTEVG Trigger: CCCTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CAA 72 bp | ACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCTTaGCTGGCTTGCGGCCAAGAGCACCACTCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPLKICSSLSA*LACGQEHHSPR Trigger: ACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAAGGCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCCAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGCAGGGCCCAGTGACTaGGCCTTGGCAGCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQGLKLQLRIASVHVEMAGPSD*ALAAIP Trigger: TGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGC...CATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTGGAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGCAGCGGCTGGAGCTGTaGGGAGGGACTTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWQRLEL*GGTSGG Trigger: GCCCCCAGAAGTCCCTCCGCACAGCTCCAGCCGCTG...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCTCCGACTGGGGGCTTTaGAGGTACATATCGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGSDWGL*RYISGS Trigger: TGACCCCGATATGTACCTCCAAAGCCCCCAGTCGGA...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGAGTTGAGGCTGCTTTCCTaGTTCTTAGGGCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTCRRGHCHPKGNWDSGELRLLS*FLGLGL Trigger: CAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAA...CTCCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGCGCCTGTGGCAGGAGTaGACAGGAACATGCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEGRCGASHSIFGENTERRLWQE*TGTCFG Trigger: TCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCG...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCGCAAGGACTGGGCCTTaGCTACCAGGTTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGARTGP*LPGLKR Trigger: CCTCTTCAAACCTGGTAGCCAAGGCCCAGTCCTTGC...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGATAACTGACAACTTCTaGATGTCGTTGAGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQGSINRTAGAAGSQRITDNF*MSLSSP Trigger: CGGGCTGCTCAACGACATTCAGAAGTTGTCAGTTAT...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGCGATGCTGGAAGTTCTaGGGGGCTGATATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QETGASGASRSQTRGGRRRCWKF*GADISG Trigger: TCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCG...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGCAGACCCACAAACTTaGCTTCCTTGGGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCPRSLWTLPLKICSSLSADPQT*LPWGQR Trigger: CCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGC...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGGCAGGGCCCAGTGACTaGGCCTTGGCAGCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWAGPSD*ALAAIP Trigger: TGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGC...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTGAGTGGACAGGAACATaGTTCGGAAGAGCCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPEWTGT*FGRAGA Trigger: AGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTC...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGGGGTCAAAGGAGGTGTaGACACGATGCTGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCPRSLWTLPLKICSSLSGSKEV*TRCWKF Trigger: GAACTTCCAGCATCGTGTCCACACCTCCTTTGACCC...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCTGAGGGCAAGGACTaGGCCTTGGCTACCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGASRSQTRGGRRIQAAKSEGKD*ALATRF Trigger: AAACCTGGTAGCCAAGGCCCAGTCCTTGCCCTCAGA...TTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGCAGCTTCACACACAGTaGCAATCTGCTCCTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKEAGKYQQDSWGSRLTEQLHTQ*QSAPHS Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAAGCTG...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCTGCCCCCATTGCAGCTaGGGTAGAGGCCATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLCPHCS*GRGHGD Trigger: ATCCCCATGGCCTCTACCTCAGCTGCAATGGGGGCA...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTACAGAACCCAAAGTCTaGGAGCTTCACCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPTEPKV*ELHPAI Trigger: GATGGCAGGGTGAAGCTCTCAGACTTTGGGTTCTGT...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTCGATGCTGGAAGTTCTaGGGGGCTGATATCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPRCWKF*GADISG Trigger: TCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCG...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAATAACAAAGGGCCACCTGCCTGTGACCTaGTGGTGTGCCCCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPLSAFLRNIPVQITKGHLPVT*WCAPIA Trigger: TGCAATGGGGGCACACCAGCAGGTCACAGGCAGGTG...GCCCTTTGTTATTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAATCAGTGTGCTCCGACTaGGGGCTTTGGAGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: ACGQEHHSPRFLETSLCKSVCSD*GLWRYI Trigger: TATGTACCTCCAAAGCCCCCAGTCGGAGCACACTGA...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTCTTCATGGCTTGCACTaGGGAGTCACTGAAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPLHGLH*GVTEVG Trigger: CCCTACTTCAGTGACTCCCCAGTGCAAGCCATGAAG...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCCCCGCAGCCTCTTCATaGCTTGCACTGGGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLPAASS*LALGSH Trigger: GTGACTCCCCAGTGCAAGCCATGAAGAGGCTGCGGG...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGAGGAAGTCTCGCAGCACTaGAGAGACCTTGTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTCRRGHCHPKGNWDSGEEVSQH*RDLVRV Trigger: AACTCTTACAAGGTCTCTCCAGTGCTGCGAGACTTC...CTCCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CAA 72 bp | TTTAAAAATCTGCAGCAGCCTGTCGGCTTTGCTGGCTaGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKNLQQPVGFAG*RPRAPLSAFLR Trigger: TCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGCCAGCAAAGCCGACAGGCTGCTGCAGATTTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGGTTGGAGCTGATAACTaGCAACTTCTGAATGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRRQGSINRTAGAAGSQRVGADN*QLLNVV Trigger: AACGACATTCAGAAGTTGTCAGTTATCAGCTCCAAC...CCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGTGCCCCCATTGCAGCTaGGGTAGAGGCCATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWCPHCS*GRGHGD Trigger: ATCCCCATGGCCTCTACCTCAGCTGCAATGGGGGCA...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTTGCAGCAGAAACGGGTaGTCCAGAAGCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERMFSTSWTMEPRCSRNG*SRSSWA Trigger: GGCCCAGGAGCTTCTGGATCACCCGTTTCTGCTGCA...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGTGCAGCAGAAACGGGTaGTCCAGAAGCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWCSRNG*SRSSWA Trigger: GGCCCAGGAGCTTCTGGATCACCCGTTTCTGCTGCA...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGCACCTGCCTGTGACCTaGTGGTGTGCCCCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWHLPVT*WCAPIA Trigger: TGCAATGGGGGCACACCAGCAGGTCACAGGCAGGTG...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTAGGCAGGCACCCAGCTaGTGCAGGCAGCGTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPRQAPS*CRQRCE Trigger: CTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCT...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGCTTGGCTACCAGGTTTaGAGAGGAGTCTTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEGRCGASHSIFGENTERLGYQV*RGVFLW Trigger: CCACAAAAAGACTCCTCTTCAAACCTGGTAGCCAAG...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCCAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGTGTGGACACGATGCTaGAAGTTCTGCGGGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGLKLQLRIASVHVEMVWTRC*KFCGAD Trigger: ATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACAC...CATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTGGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCACACCTGGCCTGCCAATaGCGGAGCCCACCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSHLACQ*RSPPGR Trigger: CCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGGTG...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATCGCCTGTGGCAGGAGTaGACAGGAACATGCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHRLWQE*TGTCFG Trigger: TCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCG...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAATAACAAAGGGCGCAAGGACTGGGCCTTaGCTACCAGGTTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLSAFLRNIPVQITKGARTGP*LPGLKR Trigger: CCTCTTCAAACCTGGTAGCCAAGGCCCAGTCCTTGC...GCCCTTTGTTATTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCTCATTCAGTCTGACTTaGGAGATGATGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCKWGFQKSDQRRKKDSGSFSLT*EMMSVR Trigger: CCTCACAGACATCATCTCCCAAGTCAGACTGAATGA...GCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAACAGCTTCACACACAGTaGCAATCTGCTCCTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGASRSQTRGGRRIQAAKQLHTQ*QSAPHS Trigger: TGAATGAGGAGCAGATTGCCACTGTGTGTGAAGCTG...TTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAATAACAAAGGGCAAGAGTTCTTTAGCTTaGGTGGGGCGCTGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPLSAFLRNIPVQITKGKSSLA*VGRCPA Trigger: TGCGGGACAGCGCCCCACCCAAGCTAAAGAACTCTT...GCCCTTTGTTATTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CAA 72 bp | AGTGTCCATGTGGAGATGGAGCATGCACCCTCTTGGTaGCCCCAGGTCACTGTGGACACTGCCTTTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVHVEMEHAPSW*PQVTVDTAFKN Trigger: ATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACCAAGAGGGTGCATGCTCCATCTCCACATGGACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCCAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGTATCCAGAATGTTCTaGCATTGTGGGGGCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQGLKLQLRIASVHVEMVSRMF*HCGGRP Trigger: GGGTCTGCCCCCACAATGGCAGAACATTCTGGATAC...CATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTGGAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGGAGTGGACAGGAACATaGTTCGGAAGAGCCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWEWTGT*FGRAGA Trigger: AGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTC...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATAGCTCCCTGCGTTGCTaGTTCCTGAGGTCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHSSLRC*FLRSII Trigger: GATGATGGACCTCAGGAAGCAGCAACGCAGGGAGCT...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATGTGTGGACACGATGCTaGAAGTTCTGCGGGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHVWTRC*KFCGAD Trigger: ATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACAC...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTGATCCACCACAGGCTTaGGCCGCCTCAGAGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPDPPQA*AASEYP Trigger: TGGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATC...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGTCCGACTGGGGGCTTTaGAGGTACATATCGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLERQKARSKKQIPSEWSDWGL*RYISGS Trigger: TGACCCCGATATGTACCTCCAAAGCCCCCAGTCGGA...CCATTCTGAAGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCACGGGCTCTGTGGTTCTaGCCAGGGCACCTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSRALWF*PGHLPV Trigger: CACAGGCAGGTGCCCTGGCCAGAACCACAGAGCCCG...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATATTGGGCTTGTTCTGTaGCAGAGGGACCGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHIGLVL*QRDRLA Trigger: AGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAAT...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCCCCCTTGGCCACTGTaGGGTCCTGGGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETPPWPL*GPGAGR Trigger: TCTACCTGCCCCAGGACCCCACAGTGGCCAAGGGGG...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| 3UTR CAA 72 bp | GCCAGGTCCAAAAAGCAGATTCCTTCAGAATGGAGCTaGGTAGAAAAGAGGTGGACAGCTCTTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARSKKQIPSEWS*VEKRWTALLRL Trigger: GAGCCTCAGAAGAGCTGTCCACCTCTTTTCTACCAAGCTCCATTCTGAAGGAATCTGCTTTTTGGACCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATGCAGACCCACAAACTTaGCTTCCTTGGGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHADPQT*LPWGQR Trigger: CCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGC...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTACCTGGCGACCTGAGTaGTTCTCCCGGGCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETTWRPE*FSRARH Trigger: GTGTCTGGCCCGGGAGAAGCACTCAGGTCGCCAGGT...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAATGTTCTCTACATCCTGGACAATGGAACCACGTGGGTCAAAGGAGGTGTaGACACGATGCTGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERMFSTSWTMEPRGSKEV*TRCWKF Trigger: GAACTTCCAGCATCGTGTCCACACCTCCTTTGACCC...ACGTGGTTCCATTGTCCAGGATGTAGAGAACATTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTGTACCACTGTCTTCATaGGCTGCAACTGCACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPVPLSS*AATAPV Trigger: CACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTAC...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTACTTCTGGGGGCTGCTaGTATCTGAGGTGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPTSGGC*YLRWSE Trigger: CTCTGACCACCTCAGATACCAGCAGCCCCCAGAAGT...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR TCA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCATAACTGACAACTTCTaGATGTCGTTGAGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLITDNF*MSLSSP Trigger: CGGGCTGCTCAACGACATTCAGAAGTTGTCAGTTAT...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR TCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTAGGTGGTCAGAGGACTaGAGGTCCCCATGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETRWSED*RSPWAA Trigger: AGCAGCCCATGGGGACCTTCAGTCCTCTGACCACCT...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTGTATCCAGAATGTTCTaGCATTGTGGGGGCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPVSRMF*HCGGRP Trigger: GGGTCTGCCCCCACAATGGCAGAACATTCTGGATAC...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTTGAGGCTGCTTTCCTaGTTCTTAGGGCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPLRLLS*FLGLGL Trigger: CAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAA...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR TCA 90 bp | CAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGGAGCATCTTGGCTACCAGGTTTaGAGAGGAGTCTTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLQLRIASVHVEMEHLGYQV*RGVFLW Trigger: CCACAAAAAGACTCCTCTTCAAACCTGGTAGCCAAG...ATGCTCCATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | GGTAATAACATGAGACTTGAGAGGCAGAAAGCCAGGTCCAAAAAGCAGATTCCTTTCATGGGCTGCAACTaGACCCGTGTGATTCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GNNMRLERQKARSKKQIPFMGCN*TRVIRE Trigger: TTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAA...AGGAATCTGCTTTTTGGACCTGGCTTTCTGCCTCTCAAGTCTCATGTTATTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTGGGACTTCTGGGGGCTaGTGGTATCTGAGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETGTSGG*WYLRWS Trigger: TGACCACCTCAGATACCAGCAGCCCCCAGAAGTCCC...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTGTACCACTGTCTTCATaGGCTGCAACTGCACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETVPLSS*AATAPV Trigger: CACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTAC...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCATCTGAGGGCAAGGACTaGGCCTTGGCTACCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSSEGKD*ALATRF Trigger: AAACCTGGTAGCCAAGGCCCAGTCCTTGCCCTCAGA...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTATCTTGACTGCTACCTaGCGACCTGAGTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQSLFPYYSCLSMGETILTAT*RPECFS Trigger: GGAGAAGCACTCAGGTCGCCAGGTAGCAGTCAAGAT...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR GCA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCATTCATGGGCTGCAACTaGACCCGTGTGATTCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSFMGCN*TRVIRE Trigger: TTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAA...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CCA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCATCATTCAGTCTGACTTaGGAGATGATGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSSFSLT*EMMSVR Trigger: CCTCACAGACATCATCTCCCAAGTCAGACTGAATGA...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | CTGCGCCTTGGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTCTGTaGTTCTGGCCAGGGCACCTGCCTGTGACCTGCTGGTGTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLGSHPIGQGLRAL*FWPGHLPVTCWCAP Trigger: GGGGGCACACCAGCAGGTCACAGGCAGGTGCCCTGGCCAGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GGGGGTGAGGTACCGGGTGGGGAACTCTGCAGGCAGGCACCCAGCTaGTGCAGGCAGCGTTGTGAGGCACCCTGGAACTCAGCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEVPGGELCRQAPS*CRQRCEAPWNSAGP Trigger: GGGCCCTGCTGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGGTACCTCACCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | CGCCTCCCTGTGGCCATAGGGGGTGAGGTACCGGGTGGGGAACTCTaGAGGCAGGCACCCAGCTGCTGCAGGCAGCGTTGTGAGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPVAIGGEVPGGEL*RQAPSCCRQRCEAP Trigger: GGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGGTACCTCACCCCCTATGGCCACAGGGAGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GGAACTCAGCAGGGCCCAGTGACTGCGCCTTGGCAGCCATCCCATTaGGCAGGGCCTGCGGGCTCTGTGGTTCTGGCCAGGGCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTQQGPVTAPWQPSH*AGPAGSVVLARAPA Trigger: GGCAGGTGCCCTGGCCAGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GGCCTGCGGGCTCTGTGGTTCTGGCCAGGGCACCTGCCTGTGACCTaGTGGTGTGCCCCCATTGCAGCTGAGGTAGAGGCCATGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GLRALWFWPGHLPVT*WCAPIAAEVEAMGI Trigger: GATCCCCATGGCCTCTACCTCAGCTGCAATGGGGGCACACCAGCAGGTCACAGGCAGGTGCCCTGGCCAGAACCACAGAGCCCGCAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | AGGCAGCGTTGTGAGGCACCCTGGAACTCAGCAGGGCCCAGTGACTaGGCCTTGGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQRCEAPWNSAGPSD*ALAAIPLGRACGLC Trigger: ACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACGCTGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GGTGAGGTACCGGGTGGGGAACTCTGCAGGCAGGCACCCAGCTGCTaGAGGCAGCGTTGTGAGGCACCCTGGAACTCAGCAGGGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEVPGGELCRQAPSC*RQRCEAPWNSAGPS Trigger: ACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGGTACCTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | TGCAGGCAGGCACCCAGCTGCTGCAGGCAGCGTTGTGAGGCACCCTaGAACTCAGCAGGGCCCAGTGACTGCGCCTTGGCAGCCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRQAPSCCRQRCEAP*NSAGPSDCALAAIP Trigger: TGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GAGGCTGCTTTCCTGGTTCTTAGGGCTAGGGCTGCCTTCTCCACCTaGCCTGCCAATGGCGGAGCCCACCAGGCAGGACTGAGGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAAFLVLRARAAFST*PANGGAHQAGLRPG Trigger: GCCCGGCCTCAGTCCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGGTGGAGAAGGCAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 90 bp | CCTTCTCCACCTGGCCTGCCAATGGCGGAGCCCACCAGGCAGGACTaGGGCCGGGCCTCTTCGGAGCTATGCTTGGCAACCTTCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPPGLPMAEPTRQD*GRASSELCLATFTP Trigger: TGGGGTGAAGGTTGCCAAGCATAGCTCCGAAGAGGCCCGGCCTCAGTCCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGGTGGAGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GTTGTGAGGCACCCTGGAACTCAGCAGGGCCCAGTGACTGCGCCTTaGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTCTGTGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVRHPGTQQGPVTAP*QPSHWAGPAGSVVL Trigger: CAGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCACCGGCTTGCTGCTGCTaGCCGCGCCTGTGGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPMERLSSVLCLWAQVAPACCC*PRLWQE Trigger: CTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGG...TGCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | CTGCGGGCTCTGTGGTTCTGGCCAGGGCACCTGCCTGTGACCTGCTaGTGTGCCCCCATTGCAGCTGAGGTAGAGGCCATGGGGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRALWFWPGHLPVTC*CAPIAAEVEAMGIS Trigger: ACTGATCCCCATGGCCTCTACCTCAGCTGCAATGGGGGCACACCAGCAGGTCACAGGCAGGTGCCCTGGCCAGAACCACAGAGCCCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | CCTGGCGACCTGAGTGCTTCTCCCGGGCCAGACACACAATGCCCGTaGAGCCCTCCCCAATCTTCACGTAGCTGTCCAGCAGCAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDLSASPGPDTQCP*SPPQSSRSCPAAAE Trigger: CTCGGCTGCTGCTGGACAGCTACGTGAAGATTGGGGAGGGCTCCACGGGCATTGTGTGTCTGGCCCGGGAGAAGCACTCAGGTCGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCAGGCTCACAGAGGAGGTGCCCATCCCTCGCTCGGCATGAGGGACCCCCAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQQAHRGGAHPSLGMRDPQPLHG*HWGVTE Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTG...GGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | TCACCCTGGTCCACCACCATCCTGAGCGCAGCCTTGAACTGTTCATaGGTCACAATGCCCGTGTCTTCGCCACCCAGGGCCCCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPWSTTILSAALNCS*VTMPVSSPPRAPLA Trigger: GGCCAAGGGGGCCCTGGGTGGCGAAGACACGGGCATTGTGACCCATGAACAGTTCAAGGCTGCGCTCAGGATGGTGGTGGACCAGGGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GCCCCGTCTGCAGCAGAAACGGGTGATCCAGAAGCTCCTGGGCCGTaGCTCGCTCTTGGGGTTCCCGTACCAGCATCCGATCCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: APSAAETGDPEAPGP*LALGVPVPASDPGS Trigger: ACTTCCTGGATCGGATGCTGGTACGGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTCTGGATCACCCGTTTCTGCTGCAGACGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCAGGCTCACAGAGGAGGTGCCCATCCCTCGCTCGGCATGAGGGACCCCCAGAATGTTCTGCCATaGTGGGGGCAGACCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQQAHRGGAHPSLGMRDPQNVLP*WGQTHK Trigger: TTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTG...GGGGTCCCTCATGCCGAGCGAGGGATGGGCACCTCCTCTGTGAGCCTGCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GTGGGCACTGAGCTGCCCCGTACCACTGTCTTCATGGGCTGCAACTaGACCCGTGTGATTCGAGAAGGATCCACCACAGGCTTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGTELPRTTVFMGCN*TRVIREGSTTGLGR Trigger: GCGGCCCAAGCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCTCAGTGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGCCGGCTTGCTGCTGCTaGCCGCGCCTGTGGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCPRSLWTLPLKICSSLSPACCC*PRLWQE Trigger: CTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGG...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | CCCTCCGTGGGCACTGAGCTGCCCCGTACCACTGTCTTCATGGGCTaGAACTGCACCCGTGTGATTCGAGAAGGATCCACCACAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSVGTELPRTTVFMG*NCTRVIREGSTTGL Trigger: CAAGCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCTCAGTGCCCACGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 90 bp | CCGGCTGGTGGGGCTGCGTCCACGCAGGGTGTTGGAGCTGATAACTaGCAACTTCTGAATGTCGTTGAGCAGCCCGGAGATGTAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAGGAASTQGVGADN*QLLNVVEQPGDVAL Trigger: GAGGGCTACATCTCCGGGCTGCTCAACGACATTCAGAAGTTGTCAGTTATCAGCTCCAACACCCTGCGTGGACGCAGCCCCACCAGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GCGCCTGTGGCAGGAGTGGACAGGAACATGCTTCGGAAGAGCCGGTaGTTGAGGCTGCTTTCCTGGTTCTTAGGGCTAGGGCTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: APVAGVDRNMLRKSR*LRLLSWFLGLGLPS Trigger: AGAAGGCAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAAGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | AGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTTaGCGCGCCTGTGGCAGGAGTGGACAGGAACATGCTTCGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIGLVLWQRDRLAAA*RACGRSGQEHASEE Trigger: CTCTTCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | AAGCAGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTaGTTGCCGCGCCTGTGGCAGGAGTGGACAGGAACATGCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQNWACSVAEGPACC*LPRLWQEWTGTCFG Trigger: TCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 90 bp | GGAAAGCAGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTaGTGCTTGCCGCGCCTGTGGCAGGAGTGGACAGGAACATGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKQNWACSVAEGPAC*CLPRLWQEWTGTCF Trigger: GAAGCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GGAGTCTTTTTGTGGTGGTCGGAAAGCAGAATTGGGCTTGTTCTGTaGCAGAGGGACCGGCTTGCTGCTGCTTGCCGCGCCTGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVFLWWSESRIGLVL*QRDRLAAACRACGR Trigger: CCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAAAAAGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | TCCCTGCGTTGCTGCTTCCTGAGGTCCATCATCTTGACTGCTACCTaGCGACCTGAGTGCTTCTCCCGGGCCAGACACACAATGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRCCFLRSIILTAT*RPECFSRARHTMPV Trigger: CACGGGCATTGTGTGTCTGGCCCGGGAGAAGCACTCAGGTCGCCAGGTAGCAGTCAAGATGATGGACCTCAGGAAGCAGCAACGCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCCGTCCACGCAGGGTGTaGGAGCTGATAACTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLANGTAVQCPLPVGTGGRPRRV*ELITDN Trigger: GTTGTCAGTTATCAGCTCCAACACCCTGCGTGGACG...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 90 bp | AGCTGCCCCGTACCACTGTCTTCATGGGCTGCAACTGCACCCGTGTaGTTCGAGAAGGATCCACCACAGGCTTGGGCCGCCTCAGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SCPVPLSSWAATAPV*FEKDPPQAWAASEY Trigger: ATACTCTGAGGCGGCCCAAGCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 90 bp | GACAGGAACATGCTTCGGAAGAGCCGGTGCTTGAGGCTGCTTTCCTaGTTCTTAGGGCTAGGGCTGCCTTCTCCACCTGGCCTGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: DRNMLRKSRCLRLLS*FLGLGLPSPPGLPM Trigger: CATTGGCAGGCCAGGTGGAGAAGGCAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAAGCACCGGCTCTTCCGAAGCATGTTCCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGCCAATGGAACGGCTGTCCAGTGTCCTTTGCCTGTGGGCACAGGTGGCCAGAATGTTCTGCCATaGTGGGGGCAGACCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLANGTAVQCPLPVGTGGQNVLP*WGQTHK Trigger: TTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTG...GCCACCTGTGCCCACAGGCAAAGGACACTGGACAGCCGTTCCATTGGCAAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 90 bp | GGATCCACCACAGGCTTGGGCCGCCTCAGAGTATCCAGAATGTTCTaGCATTGTGGGGGCAGACCCACAAACTTGCCTTCCTTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTTGLGRLRVSRMF*HCGGRPTNLPSLGS Trigger: TGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGGAGGTGCACAAACTTGCCTTCCTaGGGGTCAAAGGAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQGSINRTAGAAGSQRRCTNLPS*GSKEVW Trigger: CCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGT...GCACCTCCTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTGGATCCACCACAGGCTaGGGCCGCCTCAGAGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPGSTTG*GRLRVS Trigger: GGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATCC...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 90 bp | GAATGTTCTGCCATTGTGGGGGCAGACCCACAAACTTGCCTTCCTTaGGGTCAAAGGAGGTGTGGACACGATGCTGGAAGTTCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECSAIVGADPQTCLP*GQRRCGHDAGSSAG Trigger: CCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 90 bp | GTCAGAGGACTGAAGGTCCCCATGGGCTGCTCTGAGGGCAAGGACTaGGCCTTGGCTACCAGGTTTGAAGAGGAGTCTTTTTGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRGLKVPMGCSEGKD*ALATRFEEESFCGG Trigger: ACCACCACAAAAAGACTCCTCTTCAAACCTGGTAGCCAAGGCCCAGTCCTTGCCCTCAGAGCAGCCCATGGGGACCTTCAGTCCTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAACTCCGACTGGGGGCTTaGGAGGTACATATCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACGQEHHSPRFLETSLCKLRLGA*EVHIGV Trigger: GACCCCGATATGTACCTCCAAAGCCCCCAGTCGGAG...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAACCTGCAGAAGGGGTCACTGTCATCCCAAAGGCAACTGGGACTCTGGGGATCCTGAGCGCAGCCTaGAACTGTTCATGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AKPAEGVTVIPKATGTLGILSAA*NCSWVT Trigger: TGTGACCCATGAACAGTTCAAGGCTGCGCTCAGGAT...CCCCAGAGTCCCAGTTGCCTTTGGGATGACAGTGACCCCTTCTGCAGGTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 90 bp | CCAGGTTTGAAGAGGAGTCTTTTTGTGGTGGTCGGAAAGCAGAATTaGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGLKRSLFVVVGKQN*ACSVAEGPACCCLP Trigger: CGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAAAAAGACTCCTCTTCAAACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGCCCCAGGTCACTGTGGACACTGCCTTTAAAAATCTGCAGCAGCCTGTCGCTGAGGTCCATCATCTaGACTGCTACCTGGCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: GCPRSLWTLPLKICSSLSLRSII*TATWRP Trigger: AGGTCGCCAGGTAGCAGTCAAGATGATGGACCTCAG...CGACAGGCTGCTGCAGATTTTTAAAGGCAGTGTCCACAGTGACCTGGGGCAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGCTGAGGTCCATCATCTaGACTGCTACCTGGCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QEGRCGASHSIFGENTERLRSII*TATWRP Trigger: AGGTCGCCAGGTAGCAGTCAAGATGATGGACCTCAG...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCTCTCTGTGGGTGACTGGAAGGACCTGGGCCACTGGGGGAAGTTTACACTCATTCAGTCTGACTaGGGAGATGATGTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRLSVGDWKDLGHWGKFTLIQSD*GDDVCE Trigger: CTCACAGACATCATCTCCCAAGTCAGACTGAATGAG...TGTAAACTTCCCCCAGTGGCCCAGGTCCTTCCAGTCACCCACAGAGAGCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGAGGCAGGGAAGTATCAACAGGACAGCTGGGGCAGCAGGCTCACAGAGACCAGGGACTTTCTCTaGGGAACATCTTTGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VKEAGKYQQDSWGSRLTETRDFL*GTSLLI Trigger: GATCAGCAAAGATGTTCCCAAGAGAAAGTCCCTGGT...CTCTGTGAGCCTGCTGCCCCAGCTGTCCTGTTGATACTTCCCTGCCTCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAACAGCCTCTTCATGGCTaGCACTGGGGAGTCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGASRSQTRGGRRIQAAKQPLHG*HWGVTE Trigger: TTCAGTGACTCCCCAGTGCAAGCCATGAAGAGGCTG...TTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 90 bp | GAGTATCCAGAATGTTCTGCCATTGTGGGGGCAGACCCACAAACTTaGCTTCCTTGGGGTCAAAGGAGGTGTGGACACGATGCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EYPECSAIVGADPQT*LPWGQRRCGHDAGS Trigger: ACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGGAAGGTGCGGAGCTTCACATTCGATCTTTGGAGAGAACACTGAGAGGACAAACTTGCCTTCCTaGGGGTCAAAGGAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QEGRCGASHSIFGENTERTNLPS*GSKEVW Trigger: CCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGT...CCTCTCAGTGTTCTCTCCAAAGATCGAATGTGAAGCTCCGCACCTTCCCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGCGGCCAAGAGCACCACTCTCCGCGTTTCTTAGAAACATCCCTGTGCAAAAAAGCAGAATTGGGCTaGTTCTGTGGCAGAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ACGQEHHSPRFLETSLCKKAELG*FCGRGT Trigger: GGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTT...TTTGCACAGGGATGTTTCTAAGAAACGCGGAGAGTGGTGCTCTTGGCCGCAAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGATTCAGGCAGCGAAATCCTAAAGCAGAATTGGGCTaGTTCTGTGGCAGAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GLPEVRPEEEEGFRQRNPKAELG*FCGRGT Trigger: GGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTT...AGGATTTCGCTGCCTGAATCCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | TATTATCTGGATCGGGTCCAGACACTAGAGTTCTTCCTTGGCATTCCCTGTCTCGAGCAGCTCCCTGCGTaGCTGCTTCCTGAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YYLDRVQTLEFFLGIPCLEQLPA*LLPEVH Trigger: ATGGACCTCAGGAAGCAGCAACGCAGGGAGCTGCTC...GAGACAGGGAATGCCAAGGAAGAACTCTAGTGTCTGGACCCGATCCAGATAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 90 bp | CCCACAAACTTGCCTTCCTTGGGGTCAAAGGAGGTGTGGACACGATaGTGGAAGTTCTGCGGGGCTGATATCTCAGGACGTTTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PTNLPSLGSKEVWTR*WKFCGADISGRFFF Trigger: AAAGAAGAAACGTCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAACAGGTGCAAGTGGGGCTTCCAGAAGTCAGACCAGAGGAGGAAGAAGGCTCATTCAGTCTGACTaGGGAGATGATGTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QETGASGASRSQTRGGRRLIQSD*GDDVCE Trigger: CTCACAGACATCATCTCCCAAGTCAGACTGAATGAG...CCTTCTTCCTCCTCTGGTCTGACTTCTGGAAGCCCCACTTGCACCTGTTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGACTCCAGGGTTTGAAGCTTCAGTTGAGAATAGCAAGTGTCCATGTGGAGATGATCCTGAGCGCAGCCTaGAACTGTTCATGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLQGLKLQLRIASVHVEMILSAA*NCSWVT Trigger: TGTGACCCATGAACAGTTCAAGGCTGCGCTCAGGAT...CATCTCCACATGGACACTTGCTATTCTCAACTGAAGCTTCAAACCCTGGAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCTCCGACTGGGGGCTTaGGAGGTACATATCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVKQSLFPYYSCLSMGETLRLGA*EVHIGV Trigger: GACCCCGATATGTACCTCCAAAGCCCCCAGTCGGAG...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | CAGGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTGAGCAGCTCCCTGCGTaGCTGCTTCCTGAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVKQSLFPYYSCLSMGETEQLPA*LLPEVH Trigger: ATGGACCTCAGGAAGCAGCAACGCAGGGAGCTGCTC...AGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCACGTCCACGCAGGGTGTaGGAGCTGATAACTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSRPRRV*ELITDN Trigger: GTTGTCAGTTATCAGCTCCAACACCCTGCGTGGACG...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS-3UTR CAA 90 bp | GGTAAAACAAAGTTTATTCCCTTACTATTCCTGCCTCAGTATGGGAGAAACTCAACCAGGGACTTTCTCTaGGGAACATCTTTGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GKTKFIPLLFLPQYGRNSTRDFL*GTSLLI Trigger: GATCAGCAAAGATGTTCCCAAGAGAAAGTCCCTGGT...TGAGTTTCTCCCATACTGAGGCAGGAATAGTAAGGGAATAAACTTTGTTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | CAGGGCCCAGTGACTGCGCCTTGGCAGCCATCCCATTaGGCAGGGCCTGCGGGCTCTGTGGTTCTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGPVTAPWQPSH*AGPAGSVVLAR Trigger: CCTGGCCAGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 72 bp | GCAGGGCCCAGTGACTGCGCCTTGGCAGCCATCCCATaGGGCAGGGCCTGCGGGCTCTGTGGTTCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGPSDCALAAIP*GRACGLCGSGQ Trigger: CTGGCCAGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 72 bp | GCACCCTGGAACTCAGCAGGGCCCAGTGACTGCGCCTaGGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: APWNSAGPSDCA*AAIPLGRACGL Trigger: GAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS TCA 72 bp | CCTGGCCTGCCAATGGCGGAGCCCACCAGGCAGGACTaGGGCCGGGCCTCTTCGGAGCTATGCTTGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: PGLPMAEPTRQD*GRASSELCLAT Trigger: GGTTGCCAAGCATAGCTCCGAAGAGGCCCGGCCTCAGTCCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 72 bp | CACCCTGGAACTCAGCAGGGCCCAGTGACTGCGCCTTaGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HPGTQQGPVTAP*QPSHWAGPAGS Trigger: AGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | TGTGAGGCACCCTGGAACTCAGCAGGGCCCAGTGACTaGGCCTTGGCAGCCATCCCATTGGGCAGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CEAPWNSAGPSD*ALAAIPLGRAC Trigger: GCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | CCGGGTGGGGAACTCTGCAGGCAGGCACCCAGCTGCTaGAGGCAGCGTTGTGAGGCACCCTGGAACTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGGELCRQAPSC*RQRCEAPWNSA Trigger: TGCTGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 72 bp | GCACCCAGCTGCTGCAGGCAGCGTTGTGAGGCACCCTaGAACTCAGCAGGGCCCAGTGACTGCGCCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: APSCCRQRCEAP*NSAGPSDCALA Trigger: TGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 72 bp | TGCTGGAGAAGACCGGCCTGGAAGTGGACCAGCGGCTaGAGCTGTGCGGAGGGACTTCTGGGGGCTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CWRRPAWKWTSG*SCAEGLLGAAG Trigger: ACCAGCAGCCCCCAGAAGTCCCTCCGCACAGCTCCAGCCGCTGGTCCACTTCCAGGCCGGTCTTCTCCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 90 bp | CGTTGTGAGGCACCCTGGAACTCAGCAGGGCCCAGTGACTGCGCCTaGGCAGCCATCCCATTGGGCAGGGCCTGCGGGCTCTGTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RCEAPWNSAGPSDCA*AAIPLGRACGLCGS Trigger: AGAACCACAGAGCCCGCAGGCCCTGCCCAATGGGATGGCTGCCAAGGCGCAGTCACTGGGCCCTGCTGAGTTCCAGGGTGCCTCACAACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | GTACCGGGTGGGGAACTCTGCAGGCAGGCACCCAGCTaGTGCAGGCAGCGTTGTGAGGCACCCTGGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPGGELCRQAPS*CRQRCEAPWNS Trigger: TGAGTTCCAGGGTGCCTCACAACGCTGCCTGCAGCAGCTGGGTGCCTGCCTGCAGAGTTCCCCACCCGGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | AAGACCGGCCTGGAAGTGGACCAGCGGCTGGAGCTGTaGGGAGGGACTTCTGGGGGCTGCTGGTATCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTGLEVDQRLEL*GGTSGGCWYLR Trigger: CCTCAGATACCAGCAGCCCCCAGAAGTCCCTCCGCACAGCTCCAGCCGCTGGTCCACTTCCAGGCCGGTCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | GCAGCCCGGAGATGTAGCCCTCCGTGGGCACTGAGCTaGCCCGTACCACTGTCTTCATGGGCTGCAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AARRCSPPWALS*PVPLSSWAATA Trigger: TGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCTCAGTGCCCACGGAGGGCTACATCTCCGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS GCA 72 bp | TGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTaGTTGCCGCGCCTGTGGCAGGAGTGGACAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: WACSVAEGPACC*LPRLWQEWTGT Trigger: TGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CCA 72 bp | TTCCTGGTTCTTAGGGCTAGGGCTGCCTTCTCCACCTaGCCTGCCAATGGCGGAGCCCACCAGGCAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: FLVLRARAAFST*PANGGAHQAGL Trigger: CAGTCCTGCCTGGTGGGCTCCGCCATTGGCAGGCCAGGTGGAGAAGGCAGCCCTAGCCCTAAGAACCAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 72 bp | GCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTaGCCGCGCCTGTGGCAGGAGTGGACAGGAACATGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSVAEGPACCC*PRLWQEWTGTC Trigger: GCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 72 bp | GCAGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTaGCTGCTGCTTGCCGCGCCTGTGGCAGGAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AELGLFCGRGTG*LLLAAPVAGVD Trigger: GTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 72 bp | CGGGTGATCCAGAAGCTCCTGGGCCGTGGCTCGCTCTaGGGGTTCCCGTACCAGCATCCGATCCAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVIQKLLGRGSL*GFPYQHPIQEV Trigger: GACTTCCTGGATCGGATGCTGGTACGGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTCTGGATCACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
||
| CDS CAA 90 bp | CAGCAGAAACGGGTGATCCAGAAGCTCCTGGGCCGTGGCTCGCTCTaGGGGTTCCCGTACCAGCATCCGATCCAGGAAGTCTCGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QQKRVIQKLLGRGSL*GFPYQHPIQEVSQH Trigger: GTGCTGCGAGACTTCCTGGATCGGATGCTGGTACGGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTCTGGATCACCCGTTTCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 72 bp | CCTGCCTGTGACCTGCTGGTGTGCCCCCATTGCAGCTaGGGTAGAGGCCATGGGGATCAGTGTGCTCCGACT | + |
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Preference number: 6 (lower is better) Translates to: PACDLLVCPHCS*GRGHGDQCAPT Trigger: AGTCGGAGCACACTGATCCCCATGGCCTCTACCTCAGCTGCAATGGGGGCACACCAGCAGGTCACAGGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | CTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTTaGCGCGCCTGTGGCAGGAGTGGACAGGAACATGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLWQRDRLAAA*RACGRSGQEHA Trigger: AGCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | CAGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTTaGTGCTGCTTGCCGCGCCTGTGGCAGGAGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: QNWACSVAEGPA*CCLPRLWQEWT Trigger: TGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | GCAGCAGAAACGGGTGATCCAGAAGCTCCTGGGCCGTaGCTCGCTCTTGGGGTTCCCGTACCAGCATCCGAT | + |
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Preference number: 6 (lower is better) Translates to: AAETGDPEAPGP*LALGVPVPASD Trigger: ATCGGATGCTGGTACGGGAACCCCAAGAGCGAGCCACGGCCCAGGAGCTTCTGGATCACCCGTTTCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | TTGTGGTGGTCGGAAAGCAGAATTGGGCTTGTTCTGTaGCAGAGGGACCGGCTTGCTGCTGCTTGCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LWWSESRIGLVL*QRDRLAAACRA Trigger: GGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | TCCACCACCATCCTGAGCGCAGCCTTGAACTGTTCATaGGTCACAATGCCCGTGTCTTCGCCACCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STTILSAALNCS*VTMPVSSPPRA Trigger: GGCCCTGGGTGGCGAAGACACGGGCATTGTGACCCATGAACAGTTCAAGGCTGCGCTCAGGATGGTGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | CTGAGTGCTTCTCCCGGGCCAGACACACAATGCCCGTaGAGCCCTCCCCAATCTTCACGTAGCTGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSASPGPDTQCP*SPPQSSRSCPA Trigger: TGCTGGACAGCTACGTGAAGATTGGGGAGGGCTCCACGGGCATTGTGTGTCTGGCCCGGGAGAAGCACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | CAGAATTGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTaGCCGCGCCTGTGGCAGGAGTGGACAGGAACATGCTTCGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QNWACSVAEGPACCC*PRLWQEWTGTCFGR Trigger: TCTTCCGAAGCATGTTCCTGTCCACTCCTGCCACAGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | GAGCTGCCCCGTACCACTGTCTTCATGGGCTGCAACTaGACCCGTGTGATTCGAGAAGGATCCACCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: ELPRTTVFMGCN*TRVIREGSTTG Trigger: GCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | GGCACTGAGCTGCCCCGTACCACTGTCTTCATGGGCTaGAACTGCACCCGTGTGATTCGAGAAGGATCCACC | + |
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Preference number: 6 (lower is better) Translates to: GTELPRTTVFMG*NCTRVIREGST Trigger: GGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCCCATGAAGACAGTGGTACGGGGCAGCTCAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | GGCTGCAACTGCACCCGTGTGATTCGAGAAGGATCCACCACAGGCTaGGGCCGCCTCAGAGTATCCAGAATGTTCTGCCATTGTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GCNCTRVIREGSTTG*GRLRVSRMFCHCGG Trigger: GCCCCCACAATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCAGTTGCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | CCTGTGGCAGGAGTGGACAGGAACATGCTTCGGAAGAGCCGGTGCTaGAGGCTGCTTTCCTGGTTCTTAGGGCTAGGGCTGCCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PVAGVDRNMLRKSRC*RLLSWFLGLGLPSP Trigger: TGGAGAAGGCAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAAGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTCCTGCCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | GCAGGAGTGGACAGGAACATGCTTCGGAAGAGCCGGTaGTTGAGGCTGCTTTCCTGGTTCTTAGGGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: AGVDRNMLRKSR*LRLLSWFLGLG Trigger: CCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAAGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | TGCTGCTTCCTGAGGTCCATCATCTTGACTGCTACCTaGCGACCTGAGTGCTTCTCCCGGGCCAGACACACA | + |
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Preference number: 6 (lower is better) Translates to: CCFLRSIILTAT*RPECFSRARHT Trigger: TGTGTGTCTGGCCCGGGAGAAGCACTCAGGTCGCCAGGTAGCAGTCAAGATGATGGACCTCAGGAAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 72 bp | GGAGTGGACAGGAACATGCTTCGGAAGAGCCGGTGCTaGAGGCTGCTTTCCTGGTTCTTAGGGCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GVDRNMLRKSRC*RLLSWFLGLGL Trigger: CAGCCCTAGCCCTAAGAACCAGGAAAGCAGCCTCAAGCACCGGCTCTTCCGAAGCATGTTCCTGTCCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | CACCACAGGCTTGGGCCGCCTCAGAGTATCCAGAATGTTCTGCCATaGTGGGGGCAGACCCACAAACTTGCCTTCCTTGGGGTCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: HHRLGPPQSIQNVLP*WGQTHKLAFLGVKG Trigger: TCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAGCCTGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 72 bp | GGGGCTGCGTCCACGCAGGGTGTTGGAGCTGATAACTaGCAACTTCTGAATGTCGTTGAGCAGCCCGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GAASTQGVGADN*QLLNVVEQPGD Trigger: ATCTCCGGGCTGCTCAACGACATTCAGAAGTTGTCAGTTATCAGCTCCAACACCCTGCGTGGACGCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | ACAGGCTTGGGCCGCCTCAGAGTATCCAGAATGTTCTaGCATTGTGGGGGCAGACCCACAAACTTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TGLGRLRVSRMF*HCGGRPTNLPS Trigger: GGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | GCCATTGTGGGGGCAGACCCACAAACTTGCCTTCCTTaGGGTCAAAGGAGGTGTGGACACGATGCTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AIVGADPQTCLP*GQRRCGHDAGS Trigger: ACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 72 bp | CTTGGGCCGCCTCAGAGTATCCAGAATGTTCTGCCATaGTGGGGGCAGACCCACAAACTTGCCTTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGPPQSIQNVLP*WGQTHKLAFLG Trigger: CCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | TTTGAAGAGGAGTCTTTTTGTGGTGGTCGGAAAGCAGAATTGGGCTaGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTTGCCGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: FEEESFCGGRKAELG*FCGRGTGLLLLAAP Trigger: AGGCGCGGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAAAAAGACTCCTCTTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | TTGCCTTCCTTGGGGTCAAAGGAGGTGTGGACACGATaGTGGAAGTTCTGCGGGGCTGATATCTCAGGACGT | + |
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Preference number: 6 (lower is better) Translates to: LPSLGSKEVWTR*WKFCGADISGR Trigger: ACGTCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | CCTTCCTTGGGGTCAAAGGAGGTGTGGACACGATGCTaGAAGTTCTGCGGGGCTGATATCTCAGGACGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSLGSKEVWTRC*KFCGADISGRF Trigger: GAAACGTCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CCA 72 bp | CCCACAAACTTGCCTTCCTTGGGGTCAAAGGAGGTGTaGACACGATGCTGGAAGTTCTGCGGGGCTGATATC | + |
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Preference number: 6 (lower is better) Translates to: PTNLPSLGSKEV*TRCWKFCGADI Trigger: GATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 72 bp | TGCACCCGTGTGATTCGAGAAGGATCCACCACAGGCTaGGGCCGCCTCAGAGTATCCAGAATGTTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CTRVIREGSTTG*GRLRVSRMFCH Trigger: ATGGCAGAACATTCTGGATACTCTGAGGCGGCCCAAGCCTGTGGTGGATCCTTCTCGAATCACACGGGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | ACCAGGTTTGAAGAGGAGTCTTTTTGTGGTGGTCGGAAAGCAGAATaGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTGCTGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: TRFEEESFCGGRKAE*GLFCGRGTGLLLLA Trigger: GGCAAGCAGCAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAAAAAGACTCCTCTTCAAACCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | GAATGTTCTGCCATTGTGGGGGCAGACCCACAAACTTaGCTTCCTTGGGGTCAAAGGAGGTGTGGACACGAT | + |
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Preference number: 6 (lower is better) Translates to: ECSAIVGADPQT*LPWGQRRCGHD Trigger: ATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 72 bp | AGAATGTTCTGCCATTGTGGGGGCAGACCCACAAACTaGCCTTCCTTGGGGTCAAAGGAGGTGTGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: RMFCHCGGRPTN*PSLGSKEVWTR Trigger: TCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 72 bp | GAAGAGGAGTCTTTTTGTGGTGGTCGGAAAGCAGAATaGGGCTTGTTCTGTGGCAGAGGGACCGGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EEESFCGGRKAE*GLFCGRGTGLL Trigger: CAGCAAGCCGGTCCCTCTGCCACAGAACAAGCCCAATTCTGCTTTCCGACCACCACAAAAAGACTCCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS CAA 90 bp | AGAGTATCCAGAATGTTCTGCCATTGTGGGGGCAGACCCACAAACTaGCCTTCCTTGGGGTCAAAGGAGGTGTGGACACGATGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RVSRMFCHCGGRPTN*PSLGSKEVWTRCWK Trigger: CTTCCAGCATCGTGTCCACACCTCCTTTGACCCCAAGGAAGGCAAGTTTGTGGGTCTGCCCCCACAATGGCAGAACATTCTGGATACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS TCA 72 bp | GGAGGTGTGGACACGATGCTGGAAGTTCTGCGGGGCTaGTATCTCAGGACGTTTCTTCTTTTTCTTGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: GGVDTMLEVLRG*YLRTFLLFLAE Trigger: TTCCGCAAGAAAAAGAAGAAACGTCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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| CDS GCA 72 bp | GGGTCAAAGGAGGTGTGGACACGATGCTGGAAGTTCTaGGGGGCTGATATCTCAGGACGTTTCTTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSKEVWTRCWKF*GADISGRFFFF Trigger: GAAAAAGAAGAAACGTCCTGAGATATCAGCCCCGCAGAACTTCCAGCATCGTGTCCACACCTCCTTTGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099557.10 ENSMUST00000110853.8 |
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