Pregenerated sensors for PAK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022781Ensembl transcript IDs: ENSMUST00000023467.9
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATaGGTGCAGACAGAGCTATGCTGGTCATGGTGCAGCAAGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: TGGHWTDSCLLKGTQ*VQTELCWSWCSKLH Trigger: GTGCAGCTTGCTGCACCATGACCAGCATAGCTCTGTCTGCACGCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | GCAAGCTGCACTCACGCTCCTTCTAACTGCTGTGGGTGGCTATGGTaGTCTGTAAACAGAGTGCAGCAGAAGGAGAGAAGATGCCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ASCTHAPSNCCGWLW*SVNRVQQKERRCLC Trigger: GCAAAGGCATCTTCTCTCCTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCACCCACAGCAGTTAGAAGGAGCGTGAGTGCAGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | TATGCTGGTCATGGTGCAGCAAGCTGCACTCACGCTCCTTCTAACTaGTGTGGGTGGCTATGGTGCTCTGTAAACAGAGTGCAGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: YAGHGAASCTHAPSN*CGWLWCSVNRVQQK Trigger: CTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCACCCACAGCAGTTAGAAGGAGCGTGAGTGCAGCTTGCTGCACCATGACCAGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 90 bp | CATGGTGCAGCAAGCTGCACTCACGCTCCTTCTAACTGCTGTGGGTaGCTATGGTGCTCTGTAAACAGAGTGCAGCAGAAGGAGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: HGAASCTHAPSNCCG*LWCSVNRVQQKERR Trigger: TCTTCTCTCCTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCACCCACAGCAGTTAGAAGGAGCGTGAGTGCAGCTTGCTGCACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | GAGCACCTTCTTAAGCAGTGCCACCATGTAGCTGGCTTTCTTCTATaGTGGCAGCACTGTCATCACAATCTATCCAGACAGCGGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: EHLLKQCHHVAGFLL*WQHCHHNLSRQRLT Trigger: TGTGAGCCGCTGTCTGGATAGATTGTGATGACAGTGCTGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCACTGCTTAAGAAGGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | ATTCCTTCTCCTGATCTAGTGGCTAGGATAAGCAGACACTGCCCCTaGCCAATGCTCACGGGGCCCATACATTCTGACAGTTTAGTGATT | + |
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Preference number: 1 (lower is better) Translates to: IPSPDLVARISRHCP*PMLTGPIHSDSLVI Trigger: AATCACTAAACTGTCAGAATGTATGGGCCCCGTGAGCATTGGGCAGGGGCAGTGTCTGCTTATCCTAGCCACTAGATCAGGAGAAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 90 bp | CACCTTCTTAAGCAGTGCCACCATGTAGCTGGCTTTCTTCTATGCTaGCAGCACTGTCATCACAATCTATCCAGACAGCGGCTCACAAAC | + |
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Preference number: 1 (lower is better) Translates to: HLLKQCHHVAGFLLC*QHCHHNLSRQRLTN Trigger: GTTTGTGAGCCGCTGTCTGGATAGATTGTGATGACAGTGCTGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCACTGCTTAAGAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 90 bp | TCTGCCAGAGTGGTCAGCGGATGTACTGATAAGAGAGGGAATGTGTaGGGATGTTTCCTACACGCAGCTTCAGAAAAGCCACTTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: SARVVSGCTDKRGNV*GCFLHAASEKPLHR Trigger: TCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTAGGAAACATCCCCACACATTCCCTCTCTTATCAGTACATCCGCTGACCACTCTGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 90 bp | ATGGTGGGGACAAACCTGAACCAACCACAGGGATTTTCTTTCCTATaGTTGCAGGACCATAGGATAGACAGCAATACCTCCTCACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: MVGTNLNQPQGFSFL*LQDHRIDSNTSSQA Trigger: TGCCTGTGAGGAGGTATTGCTGTCTATCCTATGGTCCTGCAACCATAGGAAAGAAAATCCCTGTGGTTGGTTCAGGTTTGTCCCCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | TGGCTATGGTGCTCTGTAAACAGAGTGCAGCAGAAGGAGAGAAGATaGCTTTGCGGCCACCACAAAGACTGCAAGGTAATAAATAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: WLWCSVNRVQQKERR*LCGHHKDCKVINKW Trigger: CCACTTATTTATTACCTTGCAGTCTTTGTGGTGGCCGCAAAGGCATCTTCTCTCCTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 90 bp | CATGAAGAGATATTTCGGCATAGCACATTTAGGACTGGTGGTCACTaGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCGTGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: HEEIFRHSTFRTGGH*TDSCLLKGTQCVQT Trigger: TGTCTGCACGCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAATGTGCTATGCCGAAATATCTCTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR TCA 90 bp | CTGATAAGGTATAAAGCATGCAGGCAAGAACACAGTGCATACACATaGGCCCATGAAGAGATATTTCGGCATAGCACATTTAGGACTGGT | + |
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Preference number: 1 (lower is better) Translates to: LIRYKACRQEHSAYT*AHEEIFRHSTFRTG Trigger: ACCAGTCCTAAATGTGCTATGCCGAAATATCTCTTCATGGGCTCATGTGTATGCACTGTGTTCTTGCCTGCATGCTTTATACCTTATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR TCA 90 bp | AAGCCAAATATGAGGAGAAACAGGCAGAGAAAGACTACAAAATGGTaGGAATATACAGTCAGTGGGATTTTTCTTCTCTGTATCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: KPNMRRNRQRKTTKW*EYTVSGIFLLCIND Trigger: ATCATTGATACAGAGAAGAAAAATCCCACTGACTGTATATTCTCACCATTTTGTAGTCTTTCTCTGCCTGTTTCTCCTCATATTTGGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 90 bp | CTCCTTTCCCAATGTAAAGAGCTACATCAATCATTTTATCACATCTaGCTTGCATTTAGGCATAAGAAAAACTCCGAACGACAACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LLSQCKELHQSFYHI*LAFRHKKNSERQLK Trigger: TTTAAGTTGTCGTTCGGAGTTTTTCTTATGCCTAAATGCAAGGCAGATGTGATAAAATGATTGATGTAGCTCTTTACATTGGGAAAGGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGAGCAGACACTGCCCCTaGCCAATGCTCACGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: YTQLQKSHFTEHHTYASQSRHCP*PMLTGP Trigger: GGGCCCCGTGAGCATTGGGCAGGGGCAGTGTCTGCT...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGGCAGCAGCCTGTGTCCCCGGTGCTCTCGAGGATTGAGGATGGAGCAAAGCGCAGATCACTTTaGTTCCTAAAGCCAAATATG | + |
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Preference number: 2 (lower is better) Translates to: KEGQQPVSPVLSRIEDGAKRRSL*FLKPNM Trigger: CATATTTGGCTTTAGGAACCAAAGTGATCTGCGCTT...TGCTCCATCCTCAATCCTCGAGAGCACCGGGGACACAGGCTGCTGCCCCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGTGTCTGCTGAGGTCAGATGCCAACGAGAAGGAATTCCTTCTCCTGATCAACACAGGAAGGGAGTaGCACCAAAGTCACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: GECLLRSDANEKEFLLLINTGRE*HQSHTA Trigger: GGCTGTGTGACTTTGGTGCCACTCCCTTCCTGTGTT...GATCAGGAGAAGGAATTCCTTCTCGTTGGCATCTGACCTCAGCAGACACTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGGTGGACAAGCCGGTGTaGAGTCACAGCCTAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YTQLQKSHFTEHHTYASQVDKPV*SHSLRR Trigger: CCTCCTTAGGCTGTGACTCCACACCGGCTTGTCCAC...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGAACAGCTATGCTGGTCATGGTaGAGCAAGCTGCACTCACGC | + |
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Preference number: 2 (lower is better) Translates to: AASEKPLHRTSHIRITEQLCWSW*SKLHSR Trigger: GCGTGAGTGCAGCTTGCTGCACCATGACCAGCATAG...CTGTTCTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGTGTCTGCTGAGGTCAGATGCCAACGAGAAGGAATTCCTTCTCCTGATCGGCTTTCTTCTATGCTaGCAGCACTGTCATCACAAT | + |
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Preference number: 2 (lower is better) Translates to: GECLLRSDANEKEFLLLIGFLLC*QHCHHN Trigger: ATTGTGATGACAGTGCTGCCAGCATAGAAGAAAGCC...GATCAGGAGAAGGAATTCCTTCTCGTTGGCATCTGACCTCAGCAGACACTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCGTGCCACCATGTAGCTaGCTTTCTTCTATGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FRTGGHWTDSCLLKGTQCVPPCS*LSSMLA Trigger: TGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCAC...GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CAA 90 bp | GTGGGGACAAACCTGAACCAACCACAGGGATTTTCTTTCCTATGGTaGCAGGACCATAGGATAGACAGCAATACCTCCTCACAGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VGTNLNQPQGFSFLW*QDHRIDSNTSSQAK Trigger: TTTTGCCTGTGAGGAGGTATTGCTGTCTATCCTATGGTCCTGCAACCATAGGAAAGAAAATCCCTGTGGTTGGTTCAGGTTTGTCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CAA 90 bp | CTGCCCCTTCCCCCAACCCAAAGAGCAAACTTACTCATTTATGATTaGTACTCTGCAGAATGGCAGGGCGAGTATGTGTCACGTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPLPPTQRANLLIYD*YSAEWQGEYVSRSL Trigger: CAAAGAACGTGACACATACTCGCCCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTGGGGGAAGGGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCCAATGGGGATTCTTACTCTAAGAGATGGCAAAAGAGGGAATACAGAGATGTGTCACGTTCTTTaGAAGGGGATGGTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: EAPMGILTLRDGKRGNTEMCHVL*KGMVGT Trigger: TGTCCCCACCATCCCCTTTCAAAGAACGTGACACAT...CTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGAACAGTCAATGGTTATTACTTaGCCTAGAGGGTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: AASEKPLHRTSHIRITEQSMVIT*PRGWRG Trigger: CCCCCTCCACCCTCTAGGGCAAGTAATAACCATTGA...CTGTTCTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGGGACACAGTGGTGCATaGCATTATTCCACTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: YTQLQKSHFTEHHTYASQGHSGA*HYSTTG Trigger: CCCAGTAGTGGAATAATGGCATGCACCACTGTGTCC...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTTTTAGTGGAGCACGGGTTCAAGCTTGGGGCTTTGTGCATGATAGGCATTCTAACTGCTGTGGGTaGCTATGGTGCTCTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: TVFSGARVQAWGFVHDRHSNCCG*LWCSVN Trigger: GTTTACAGAGCACCATAGCCACCCACAGCAGTTAGA...ATGCCTATCATGCACAAAGCCCCAAGCTTGAACCCGTGCTCCACTAAAAACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGAATCTGTTCGTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTGAGGATAAGCAGACACTaGCCCTGCCCAATGCTCACG | + |
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Preference number: 2 (lower is better) Translates to: MLESVRNSNIKHSISARVRISRH*PCPMLT Trigger: CGTGAGCATTGGGCAGGGGCAGTGTCTGCTTATCCT...CACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTACGAACAGATTCAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGATCTCAGTATGCTTCTAAGATTTTCATATTCAAAACTGGATGCAGCCTGCCTTGGAGTCAGGTTTaGATGACAGAGTCCGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: CRSQYASKIFIFKTGCSLPWSQV*MTESVA Trigger: GGCGACGGACTCTGTCATTCAAACCTGACTCCAAGG...CAGGCTGCATCCAGTTTTGAATATGAAAATCTTAGAAGCATACTGAGATCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCGAGAAGATCAGCAGATaGAATACTCAGAAAAACTTG | + |
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Preference number: 2 (lower is better) Translates to: FRTGGHWTDSCLLKGTQCEKISR*NTQKNL Trigger: CAAGTTTTTCTGAGTATTTCATCTGCTGATCTTCTC...GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGATAAGGTATAAAGCATaGAGGCAAGAACACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: YTQLQKSHFTEHHTYASQIRYKA*RQEHSA Trigger: TGCACTGTGTTCTTGCCTGCATGCTTTATACCTTAT...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTCCAATGGGGATTCTTACTCTAAGAGATGGCAAAAGAGGGAATACAGAGGGTTCAAATCTCACTTaGTTTCTGCTAGTCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: EAPMGILTLRDGKRGNTEGSNLT*FLLVPN Trigger: ATTTGGGACTAGCAGAAACCAAGTGAGATTTGAACC...CTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGAATCTGTTCGTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTGAACAGGACACAGTGGTaGATGCCATTATTCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: MLESVRNSNIKHSISARVNRTQW*MPLFHY Trigger: GTAGTGGAATAATGGCATGCACCACTGTGTCCTGTT...CACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTACGAACAGATTCAAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGTCTTACTCTAAGAGATaGCAAAAGAGGGAATACAGA | + |
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Preference number: 2 (lower is better) Translates to: YTQLQKSHFTEHHTYASQSYSKR*QKREYR Trigger: TCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGA...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CAA 90 bp | TCCATCAAGTACTGCACTATTTCATCTGTCATAAACAGTAAAACATaGATAATGGGTCAGGAACACTGTAGATTAGATGAGTCTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: SIKYCTISSVINSKT*IMGQEHCRLDESLQ Trigger: CTGTAAAGACTCATCTAATCTACAGTGTTCCTGACCCATTATCAATGTTTTACTGTTTATGACAGATGAAATAGTGCAGTACTTGATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR TCA 72 bp | GGGGCAGCAGCCTGTGTCCCCGGTGCTCTCGAGGATTaGGGATGGAGCACCTTCTTAAGCAGTGCCACCATG | + |
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Preference number: 3 (lower is better) Translates to: GAAACVPGALED*GWSTFLSSATM Trigger: CATGGTGGCACTGCTTAAGAAGGTGCTCCATCCTCAATCCTCGAGAGCACCGGGGACACAGGCTGCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | CAAACCCCAGACTGCTTCTGTGTGGACAAGCCGGTGTaGAGTCACAGCCTAAGGAGGGGCAGCAGCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: QTPDCFCVDKPV*SHSLRRGSSLC Trigger: ACACAGGCTGCTGCCCCTCCTTAGGCTGTGACTCCACACCGGCTTGTCCACACAGAAGCAGTCTGGGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 72 bp | CCTGATCTAGTGGCTAGGATAAGCAGACACTGCCCCTaGCCAATGCTCACGGGGCCCATACATTCTGACAGT | + |
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Preference number: 3 (lower is better) Translates to: PDLVARISRHCP*PMLTGPIHSDS Trigger: ACTGTCAGAATGTATGGGCCCCGTGAGCATTGGGCAGGGGCAGTGTCTGCTTATCCTAGCCACTAGATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 72 bp | CACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATaGGTGCAGACAGAGCTATGCTGGTCATGGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: HWTDSCLLKGTQ*VQTELCWSWCS Trigger: GCTGCACCATGACCAGCATAGCTCTGTCTGCACGCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | GCAAGCTGCACTCACGCTCCTTCTAACTGCTGTGGGTaGCTATGGTGCTCTGTAAACAGAGTGCAGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ASCTHAPSNCCG*LWCSVNRVQQK Trigger: CTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCACCCACAGCAGTTAGAAGGAGCGTGAGTGCAGCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | ACAGACACTTATTTCCAAGGAAACACAGGAAGGGAGTaGCACCAAAGTCACACAGCCCGCGTCAACAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: TDTYFQGNTGRE*HQSHTARVNKR Trigger: GCGCTTGTTGACGCGGGCTGTGTGACTTTGGTGCCACTCCCTTCCTGTGTTTCCTTGGAAATAAGTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | TGCACTCACGCTCCTTCTAACTGCTGTGGGTGGCTATaGTGCTCTGTAAACAGAGTGCAGCAGAAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: CTHAPSNCCGWL*CSVNRVQQKER Trigger: TCTCTCCTTCTGCTGCACTCTGTTTACAGAGCACCATAGCCACCCACAGCAGTTAGAAGGAGCGTGAGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR TCA 72 bp | TTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTaGAGGGAACTCAATGCGTGCAGACAGAGCTATGCT | + |
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Preference number: 3 (lower is better) Translates to: LGLVVTGQTAVC*RELNACRQSYA Trigger: AGCATAGCTCTGTCTGCACGCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 72 bp | TCTCGAGGATTGAGGATGGAGCACCTTCTTAAGCAGTaGCACCATGTAGCTGGCTTTCTTCTATGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SRGLRMEHLLKQ*HHVAGFLLCWQ Trigger: CTGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCACTGCTTAAGAAGGTGCTCCATCCTCAATCCTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | AAGCAGTGCCACCATGTAGCTGGCTTTCTTCTATGCTaGCAGCACTGTCATCACAATCTATCCAGACAGCGG | + |
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Preference number: 3 (lower is better) Translates to: KQCHHVAGFLLC*QHCHHNLSRQR Trigger: CCGCTGTCTGGATAGATTGTGATGACAGTGCTGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCTATGTGTCACGTTCTTaGAAAGGGGATGGTGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: FRTGGHWTDSCLLKGTQCYVSRS*KGDGGD Trigger: GTCCCCACCATCCCCTTTCAAAGAACGTGACACATA...GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR GCA 72 bp | AACAGGATCTGCCATACTAAAAGTCATCACACAGTATaGGAACGTCAAGCGCGGTCTGCGGGACATGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: NRICHTKSHHTV*ERQARSAGHVR Trigger: CCTTACATGTCCCGCAGACCGCGCTTGACGTTCGCATACTGTGTGATGACTTTTAGTATGGCAGATCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| 3UTR CCA 72 bp | AGTCACACAGCCCGCGTCAACAAGCGCAGATCACTTTaGTTCCTAAAGCCAAATATGAGGAGAAACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHTARVNKRRSL*FLKPNMRRNRQ Trigger: CTGCCTGTTTCTCCTCATATTTGGCTTTAGGAACCAAAGTGATCTGCGCTTGTTGACGCGGGCTGTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | GTGGTCAGCGGATGTACTGATAAGAGAGGGAATGTGTaGGGATGTTTCCTACACGCAGCTTCAGAAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VVSGCTDKRGNV*GCFLHAASEKP Trigger: TGGCTTTTCTGAAGCTGCGTGTAGGAAACATCCCCACACATTCCCTCTCTTATCAGTACATCCGCTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR GCA 72 bp | CTTAAGCAGTGCCACCATGTAGCTGGCTTTCTTCTATaGTGGCAGCACTGTCATCACAATCTATCCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LKQCHHVAGFLL*WQHCHHNLSRQ Trigger: CTGTCTGGATAGATTGTGATGACAGTGCTGCCAGCATAGAAGAAAGCCAGCTACATGGTGGCACTGCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | CTAGATACTGTTTTTAGTGGAGCACGGGTTCAAGCTTaGGGCTTTGTGCATGATAGGCATGTGACTCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LDTVFSGARVQA*GFVHDRHVTHH Trigger: GTGGTGAGTCACATGCCTATCATGCACAAAGCCCCAAGCTTGAACCCGTGCTCCACTAAAAACAGTATCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTGAATCTGTTCGTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTGCGGTGCTCTCGAGGATaGAGGATGGAGCACCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: MLESVRNSNIKHSISARVRCSRG*RMEHLL Trigger: AAGAAGGTGCTCCATCCTCAATCCTCGAGAGCACCG...CACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTACGAACAGATTCAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | ATATTTCGGCATAGCACATTTAGGACTGGTGGTCACTaGACAGACAGCTGTCTGTTGAAGGGAACTCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: IFRHSTFRTGGH*TDSCLLKGTQC Trigger: GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAATGTGCTATGCCGAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTTTTTAGTGGAGCACGGGTTCAAGCTTGGGGCTTTGTGCATGATAGGCATTTTTCTTTCCTATGGTaGCAGGACCATAGGATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVFSGARVQAWGFVHDRHFSFLW*QDHRID Trigger: GTCTATCCTATGGTCCTGCAACCATAGGAAAGAAAA...ATGCCTATCATGCACAAAGCCCCAAGCTTGAACCCGTGCTCCACTAAAAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | CCTTCCCCCAACCCAAAGAGCAAACTTACTCATTTATaGTTTGTACTCTGCAGAATGGCAGGGCGAGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: PSPNPKSKLTHL*FVLCRMAGRVC Trigger: ACATACTCGCCCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTGGGGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR GCA 72 bp | GTAAACAGAGTGCAGCAGAAGGAGAGAAGATGCCTTTaGGGCCACCACAAAGACTGCAAGGTAATAAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: VNRVQQKERRCL*GHHKDCKVINK Trigger: CTTATTTATTACCTTGCAGTCTTTGTGGTGGCCGCAAAGGCATCTTCTCTCCTTCTGCTGCACTCTGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR-3UTR CAA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGAGGTTCAAATCTCACTaGGTTTCTGCTAGTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YTQLQKSHFTEHHTYASQRFKSH*VSASPK Trigger: TTTGGGACTAGCAGAAACCAAGTGAGATTTGAACCT...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTGAATCTGTTCGTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTGACAGACAGCTGTCTGTaGAAGGGAACTCAATGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: MLESVRNSNIKHSISARVTDSCL*KGTQCV Trigger: CACGCATTGAGTTCCCTTCAACAGACAGCTGTCTGT...CACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTACGAACAGATTCAAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | GTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTaGTCAGCGGATGTACTGATAAGAGAGGGAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VTLISNTASLPE*SADVLIREGMC Trigger: ACACATTCCCTCTCTTATCAGTACATCCGCTGACCACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | AACAGGCCAGTAAGTGCTCTAGATGTTGACTTTTGCTaGAAGCCCCTAGTGATCTCTTCTTATCCTGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: NRPVSALDVDFC*KPLVISSYPVF Trigger: GAATACAGGATAAGAAGAGATCACTAGGGGCTTTCAGCAAAAGTCAACATCTAGAGCACTTACTGGCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | GCAAACTTACTCATTTATGATTTGTACTCTGCAGAATaGCAGGGCGAGTATGTGTCACGTTCTTTGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ANLLIYDLYSAE*QGEYVSRSLKG Trigger: CCCTTTCAAAGAACGTGACACATACTCGCCCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CCA 72 bp | AAGGGAGGCTCCAATGGGGATTCTTACTCTAAGAGATaGCAAAAGAGGGAATACAGAGGCAAGTCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGGSNGDSYSKR*QKREYRGKSLK Trigger: TTTTAAAGACTTGCCTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | GGAAGGGAAGGTCACGAAGGAGAGAAGATCAGCAGATaGAATACTCAGAAAAACTTGAATCTGACATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GREGHEGEKISR*NTQKNLNLTFK Trigger: CTTGAATGTCAGATTCAAGTTTTTCTGAGTATTTCATCTGCTGATCTTCTCTCCTTCGTGACCTTCCCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | TATAAAGCATGCAGGCAAGAACACAGTGCATACACATaGGCCCATGAAGAGATATTTCGGCATAGCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: YKACRQEHSAYT*AHEEIFRHSTF Trigger: AAATGTGCTATGCCGAAATATCTCTTCATGGGCTCATGTGTATGCACTGTGTTCTTGCCTGCATGCTTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | ATGAGGAGAAACAGGCAGAGAAAGACTACAAAATGGTaGGAATATACAGTCAGTGGGATTTTTCTTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MRRNRQRKTTKW*EYTVSGIFLLC Trigger: ACAGAGAAGAAAAATCCCACTGACTGTATATTCTCACCATTTTGTAGTCTTTCTCTGCCTGTTTCTCCTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR GCA 72 bp | CAATGTAAAGAGCTACATCAATCATTTTATCACATCTaGCTTGCATTTAGGCATAAGAAAAACTCCGAACGA | + |
|
Preference number: 3 (lower is better) Translates to: QCKELHQSFYHI*LAFRHKKNSER Trigger: TCGTTCGGAGTTTTTCTTATGCCTAAATGCAAGGCAGATGTGATAAAATGATTGATGTAGCTCTTTACATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR GCA 72 bp | CAGTATGCTTCTAAGATTTTCATATTCAAAACTGGATaGAGCCTGTTTCAACACCTACCTTCTAATTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QYASKIFIFKTG*SLFQHLPSNSN Trigger: GTTAGAATTAGAAGGTAGGTGTTGAAACAGGCTGCATCCAGTTTTGAATATGAAAATCTTAGAAGCATACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR TCA 72 bp | TACAGTTTACTGTCAGAAACTTCACCTCTACAATATTaGCATTTCATTATTACAACTAGCCTAGAACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: YSLLSETSPLQY*HFIITTSLELT Trigger: GGTGAGTTCTAGGCTAGTTGTAATAATGAAATGTCAATATTGTAGAGGTGAAGTTTCTGACAGTAAACTGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCCACACGGCGGCAATCTaGGCTTCGTCCATGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRTGGHWTDSCLLKGTQCHTAAI*ASSMQV Trigger: AACCTGCATGGACGAAGCGCAGATTGCCGCCGTGTG...GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | TCTGCAGAATGGCAGGGCGAGTATGTGTCACGTTCTTaGAAAGGGGATGGTGGGGACAAACCTGAACCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SAEWQGEYVSRS*KGDGGDKPEPT Trigger: GGTTGGTTCAGGTTTGTCCCCACCATCCCCTTTCAAAGAACGTGACACATACTCGCCCTGCCATTCTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGGGAGAGGGCAGCTAACAGCTACTACTACAGGTCACAGACCTTTTATTCCCCTTGGTGTTCAGTaGTGGTGTTCCAGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVGRGQLTATTTGHRPFIPLGVQ*WCSRRE Trigger: TTCCCTTCTGGAACACCAGCACTGAACACCAAGGGG...AATAAAAGGTCTGTGACCTGTAGTAGTAGCTGTTAGCTGCCCTCTCCCCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGACTGCTCATCCGAACTaGAGGTGCTGGGGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTQLQKSHFTEHHTYASQTAHPN*RCWGLV Trigger: GACAAGCCCCCAGCACCTCCAGTTCGGATGAGCAGT...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCTAAGCATGTCAAGCTCCTTTCCCAATGTAAAGAGCTACATCAATCATTTCTGGCCGAGGGGCAATaGCGGGAGGAGCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAKHVKLLSQCKELHQSFLAEGQ*REEQRL Trigger: AAGACGCTGCTCCTCCCGTCATTGCCCCTCGGCCAG...AAATGATTGATGTAGCTCTTTACATTGGGAAAGGAGCTTGACATGCTTAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCCAATGGGGATTCTTACTCTAAGAGATGGCAAAAGAGGGAATACAGAGCTGTTACAACATCAGTaGGGGACCCACCAGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAPMGILTLRDGKRGNTELLQHQ*GTHQRG Trigger: ACCTCGCTGGTGGGTCCCTCACTGATGTTGTAACAG...CTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCCAATGGGGATTCTTACTCTAAGAGATGGCAAAAGAGGGAATACAGAGGTAATGTTGGAGGTCTaGAACAGCCGCGCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EAPMGILTLRDGKRGNTEVMLEV*NSRAHC Trigger: ACAGTGGGCGCGGCTGTTGCAGACCTCCAACATTAC...CTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAGTGTCTGCTGAGGTCAGATGCCAACGAGAAGGAATTCCTTCTCCTGATCAGACCGTGTGTAAATTaGTTTTGTATGATCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GECLLRSDANEKEFLLLIRPCVN*FCMIWP Trigger: CGGCCAGATCATACAAAATCAATTTACACACGGTCT...GATCAGGAGAAGGAATTCCTTCTCGTTGGCATCTGACCTCAGCAGACACTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAGTGTCTGCTGAGGTCAGATGCCAACGAGAAGGAATTCCTTCTCCTGATCGTCAGTAAGTTTAACTaGGCCTTCCATTCCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GECLLRSDANEKEFLLLIVSKFN*AFHSQK Trigger: CTTTTGGGAATGGAAGGCTCAGTTAAACTTACTGAC...GATCAGGAGAAGGAATTCCTTCTCGTTGGCATCTGACCTCAGCAGACACTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CCA 90 bp | CAACCCAAAGAGCAAACTTACTCATTTATGATTTGTACTCTGCAGAATGGCAGGCCGCGCCCACTGTTCTaGCATGCCAGTGAACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPKEQTYSFMICTLQNGRPRPLF*HASELS Trigger: GGAGAGTTCACTGGCATGCCAGAACAGTGGGCGCGG...CCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | AAGTCACACAGCCCGCGTCAACAAGCGCAGATCACTTaGGTTCCTAAAGCCAAATATGAGGAGAAACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHSPRQQAQIT*VPKAKYEEKQA Trigger: TGCCTGTTTCTCCTCATATTTGGCTTTAGGAACCAAAGTGATCTGCGCTTGTTGACGCGGGCTGTGTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | TACACGCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGCTTTCTCAGGAGGAGTaGAACTCAGGTACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTQLQKSHFTEHHTYASQLSQEE*NSGTSV Trigger: AACAGAAGTACCTGAGTTTCACTCCTCCTGAGAAAG...CTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGCGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCCAATGGGGATTCTTACTCTAAGAGATGGCAAAAGAGGGAATACAGAGCTTTTTCTGTTTGTCTaGAGACTTGGCACCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EAPMGILTLRDGKRGNTELFLFV*RLGTTV Trigger: GACAGTGGTGCCAAGTCTTCAGACAAACAGAAAAAG...CTCTGTATTCCCTCTTTTGCCATCTCTTAGAGTAAGAATCCCCATTGGAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCAACCCAAAGAGCAAACTTACTCATTTATGATTTGTACTCTGCAGAATCCTGTAAACACTCTCTaGACACGGCGGCAATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPQPKEQTYSFMICTLQNPVNTL*TRRQSA Trigger: CGCAGATTGCCGCCGTGTGCAGAGAGTGTTTACAGG...ATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTGGGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | AACCTGAACCAACCACAGGGATTTTCTTTCCTATGGTaGCAGGACCATAGGATAGACAGCAATACCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNQPQGFSFLW*QDHRIDSNTSS Trigger: TGAGGAGGTATTGCTGTCTATCCTATGGTCCTGCAACCATAGGAAAGAAAATCCCTGTGGTTGGTTCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | CCCCCAACCCAAAGAGCAAACTTACTCATTTATGATTaGTACTCTGCAGAATGGCAGGGCGAGTATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPTQRANLLIYD*YSAEWQGEYVS Trigger: TGACACATACTCGCCCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CCA 90 bp | CAACCCAAAGAGCAAACTTACTCATTTATGATTTGTACTCTGCAGAATGGCAGGTGTTCAGGAGTGATCTaGGCACAGAAGCCGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPKEQTYSFMICTLQNGRCSGVI*AQKPKS Trigger: TGACTTCGGCTTCTGTGCCCAGATCACTCCTGAACA...CCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCAACCCAAAGAGCAAACTTACTCATTTATGATTTGTACTCTGCAGAATAGTTTCAGGAAAGGATaGTGTAACAGTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPQPKEQTYSFMICTLQNSFRKG*CNSSLA Trigger: GGCCAAGGAACTGTTACAGCATCCTTTCCTGAAACT...ATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTGGGGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGATCTCAGTATGCTTCTAAGATTTTCATATTCAAAACTGGATGCAGCCTGTCTGTTTCACAGTGTTaGAGTCGTAGAACTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRSQYASKIFIFKTGCSLSVSQC*SRRTSR Trigger: TCTTGAAGTTCTACGACTCCAACACTGTGAAACAGA...CAGGCTGCATCCAGTTTTGAATATGAAAATCTTAGAAGCATACTGAGATCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | GTAAAGAGCTACATCAATCATTTTATCACATCTGCCTaGCATTTAGGCATAAGAAAAACTCCGAACGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSYINHFITSA*HLGIRKTPNDN Trigger: GTTGTCGTTCGGAGTTTTTCTTATGCCTAAATGCAAGGCAGATGTGATAAAATGATTGATGTAGCTCTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| 3UTR CAA 72 bp | TACTGCACTATTTCATCTGTCATAAACAGTAAAACATaGATAATGGGTCAGGAACACTGTAGATTAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCTISSVINSKT*IMGQEHCRLDE Trigger: CTCATCTAATCTACAGTGTTCCTGACCCATTATCAATGTTTTACTGTTTATGACAGATGAAATAGTGCAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGGGGCAGCAGCCTGTGTCCCCGGTGCTCTCGAGGATTGAGGATGGAGCACAGACCGTGTGTAAATaGATTTTGTATGATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEGQQPVSPVLSRIEDGAQTVCK*ILYDLA Trigger: GGCCAGATCATACAAAATCAATTTACACACGGTCTG...TGCTCCATCCTCAATCCTCGAGAGCACCGGGGACACAGGCTGCTGCCCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTTTAGTGGAGCACGGGTTCAAGCTTGGGGCTTTGTGCATGATAGGCATCTTGATAGCAACCTCTaGCCCCAGGGCCACATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVFSGARVQAWGFVHDRHLDSNL*PQGHIS Trigger: ACTGATGTGGCCCTGGGGCAAGAGGTTGCTATCAAG...ATGCCTATCATGCACAAAGCCCCAAGCTTGAACCCGTGCTCCACTAAAAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGTGTCTGCTGAGGTCAGATGCCAACGAGAAGGAATTCCTTCTCCTGATCTGTTTGTCTGAAGACTaGGCACCACTGTCAACATTA | + |
|
Preference number: 5 (lower is better) Translates to: GECLLRSDANEKEFLLLICLSED*APLSTL Trigger: TAATGTTGACAGTGGTGCCAAGTCTTCAGACAAACA...GATCAGGAGAAGGAATTCCTTCTCGTTGGCATCTGACCTCAGCAGACACTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGGACTGGTGGTCACTGGACAGACAGCTGTCTGTTGAAGGGAACTCAATGCGTGTGTAAATTGATTTaGTATGATCTGGCCGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FRTGGHWTDSCLLKGTQCVCKLI*YDLAEG Trigger: CCCCTCGGCCAGATCATACAAAATCAATTTACACAC...GCATTGAGTTCCCTTCAACAGACAGCTGTCTGTCCAGTGACCACCAGTCCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTTGAATCTGTTCGTAACTCTAATATCAAACACAGCATCTCTGCCAGAGTGGATGTCTCTGACCCCTaGGTGTTCAGTGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLESVRNSNIKHSISARVDVSDP*VFSAGV Trigger: AACACCAGCACTGAACACCAAGGGGTCAGAGACATC...CACTCTGGCAGAGATGCTGTGTTTGATATTAGAGTTACGAACAGATTCAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCAGAAAAGCCACTTCACAGAACATCACACATACGCATCACAGAACAGGCTTTCTTTTTCTGTTaGTCTGAAGACTTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: AASEKPLHRTSHIRITEQAFFFC*SEDLAP Trigger: TGGTGCCAAGTCTTCAGACAAACAGAAAAAGAAAGC...CTGTTCTGTGATGCGTATGTGTGATGTTCTGTGAAGTGGCTTTTCTGAAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| CDS-3UTR CAA 90 bp | CAACCCAAAGAGCAAACTTACTCATTTATGATTTGTACTCTGCAGAATGGCAGGTCTTCATCGGTCATCTaGGCTTTCTTTTTCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: QPKEQTYSFMICTLQNGRSSSVI*AFFFCL Trigger: CAAACAGAAAAAGAAAGCCAAGATGACCGATGAAGA...CCTGCCATTCTGCAGAGTACAAATCATAAATGAGTAAGTTTGCTCTTTGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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| CDS CAA 72 bp | TCTTCCTCTGTCACTACAGCTGATGTCTCTGACCCCTaGGTGTTCAGTGCTGGTGTTCCAGAAGGGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSVTTADVSDP*VFSAGVPEGKP Trigger: TGGCTTCCCTTCTGGAACACCAGCACTGAACACCAAGGGGTCAGAGACATCAGCTGTAGTGACAGAGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023467.9 |
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