Pregenerated sensors for PAK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030774Ensembl transcript IDs: ENSMUST00000033040.12, ENSMUST00000156637.3, ENSMUST00000206351.2, ENSMUST00000206984.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTaGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: LHQGHGSGNRASSCP*QIIRPRGISKLLWF Trigger: AAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 90 bp | AAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATaGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAG | + |
|
Preference number: 1 (lower is better) Translates to: KHGRSPMSGSAAPRA*FGKQSLFLSLADYQ Trigger: CTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR GCA 90 bp | CACACACAAAGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTaGACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: HTQRKTWSFSHVRIS*TKGMVRETEPLPVP Trigger: AGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCTTTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 90 bp | GTTTCAGTGATTGTTCTTGGTTGCCTCTTTTGCTGCAGCAATCAGTaGAGTCAGGCTAGAGAGGGGCTTGGCAATCTTCAGGAACTGATG | + |
|
Preference number: 1 (lower is better) Translates to: VSVIVLGCLFCCSNQ*SQAREGLGNLQELM Trigger: CATCAGTTCCTGAAGATTGCCAAGCCCCTCTCTAGCCTGACTCCACTGATTGCTGCAGCAAAAGAGGCAACCAAGAACAATCACTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR GCA 90 bp | ACACCCGCAATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTaGAGAGAGCTTGGTCATGCACTTAAAAACAGGGTCCCCTTATTA | + |
|
Preference number: 1 (lower is better) Translates to: TPAIRVHLQRVSMST*RELGHALKNRVPLL Trigger: TAATAAGGGGACCCTGTTTTTAAGTGCATGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATTGCGGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR CCA 90 bp | GGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTaGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: GKQSLFLSLADYQAP*HFKAVMVFKYNEVF Trigger: GAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR GCA 90 bp | CCATGCCCACAAACTGGAAGGGAATTCCTATTTAGAAATGGCCTCTaGTGGATTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAG | + |
|
Preference number: 1 (lower is better) Translates to: PCPQTGREFLFRNGL*WITRPVAILFSARQ Trigger: CTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCCAGTTTGTGGGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 90 bp | TGCCCACAAACTGGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTaGATTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: CPQTGREFLFRNGLC*ITRPVAILFSARQF Trigger: AAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCCAGTTTGTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 90 bp | TGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATaGTTTTCAAATACAATGAGGTGTTCAGGCAATTTAGTCACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: CPWQIIRPRGISKLL*FSNTMRCSGNLVTE Trigger: TTCTGTGACTAAATTGCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTAGAAGGCTTGGCACATaGGGCTGGGATGAGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RETEPLPVPGRLSGPVAFRRLGT*GWDERG Trigger: ACCACGCTCATCCCAGCCTCATGTGCCAAGCCTTCT...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAAGGAGAAGAGGACATaGGGGGTCGGAGTTCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: QLHQGHGSGNRASSCPWQKEKRT*GVGVPE Trigger: TTCAGGAACTCCGACCCCTCATGTCCTCTTCTCCTT...CTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTAAGGAGAAGAGGACATaGGGGGTCGGAGTTCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: HGSGNRASSCPWQIIRPRKEKRT*GVGVPE Trigger: TTCAGGAACTCCGACCCCTCATGTCCTCTTCTCCTT...ACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAGAAATGGCCTCTGCTaGATTACTCGTCCAGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QLHQGHGSGNRASSCPWQRNGLC*ITRPVA Trigger: TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCT...CTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCTGGGTCCATAGGCCTTaGGTGTCACAACTTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KGMVRETEPLPVPGRLSGWVHRP*VSQLQV Trigger: CACCTGAAGTTGTGACACGCAAGGCCTATGGACCCA...GCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGCCTCTTCCTGTCCCTaGCAGATTATCAGGCCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: PLPVPGRLSGPVAFQSCYASSCP*QIIRPR Trigger: ACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGC...ATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAGAAGGCTTGGCACATaGGGCTGGGATGAGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLADYQAPWHFKAVMVFRRLGT*GWDERG Trigger: ACCACGCTCATCCCAGCCTCATGTGCCAAGCCTTCT...GAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGCAATGGGGCTGGCATGACAAGCCACAATGCTGGCCAAGCATCCTACCACAGATTCGGGTAAACCCTTaGTCATCAGTTCCCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: RQWGWHDKPQCWPSILPQIRVNP*SSVPSM Trigger: CATGGAGGGAACTGATGAGCAAGGGTTTACCCGAAT...CTGTGGTAGGATGCTTGGCCAGCATTGTGGCTTGTCATGCCAGCCCCATTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTAGAAATGGCCTCTGCTaGATTACTCGTCCAGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RETEPLPVPGRLSGPVAFRNGLC*ITRPVA Trigger: TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCT...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGACTCTTGATGTCCCTGTaGATGACTTGGTTTGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: SCTKGMVRETEPLPVPGRLLMSL*MTWFEC Trigger: ACATTCAAACCAAGTCATTCACAGGGACATCAAGAG...TCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR GCA 90 bp | GCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATATTCGGGTAAACCCTTaGTCATCAGTTCCCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: APRAWFGKQSLFLSLADYIRVNP*SSVPSM Trigger: CATGGAGGGAACTGATGAGCAAGGGTTTACCCGAAT...ATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTAACACTACTGGGTCATaGTTCTCCAAAACAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHQGHGSGNRASSCPWQINTTGS*FSKTAA Trigger: AGCAGCTGTTTTGGAGAACCATGACCCAGTAGTGTT...AATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTAGGGGTCGGAGTTCCTaGAACAAGTGTTTATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LHQGHGSGNRASSCPWQIRGRSS*NKCLFH Trigger: ATGAAATAAACACTTGTTTCAGGAACTCCGACCCCT...AATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CCA 90 bp | AATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTGCAGAGAGCTTGGTCAGGTAGGCAATGGGGCTaGCATGACAAGCCACAATGC | + |
|
Preference number: 2 (lower is better) Translates to: NTRPFAESKHVHLQRAWSGRQWG*HDKPQC Trigger: GCATTGTGGCTTGTCATGCCAGCCCCATTGCCTACC...TGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATATTCGGGTAAACCCTTaGTCATCAGTTCCCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: PLPVPGRLSGPVAFQSCYIRVNP*SSVPSM Trigger: CATGGAGGGAACTGATGAGCAAGGGTTTACCCGAAT...ATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACACAAGTATAGCCGGACAGGTGCTGAAGCCAGCCATGTGCTAAAAGTAGCTTGGGTTCTGAAGCTCTaGCGTCCCATTGGTAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SHKYSRTGAEASHVLKVAWVLKL*RPIGSN Trigger: ATTGCTACCAATGGGACGCCAGAGCTTCAGAACCCA...AGCTACTTTTAGCACATGGCTGGCTTCAGCACCTGTCCGGCTATACTTGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCAGGGAATCAAAAGCTaGTACATAGCTAAGACCATT | + |
|
Preference number: 2 (lower is better) Translates to: SFSHVRISCTKGMVRETEQGIKS*YIAKTI Trigger: AATGGTCTTAGCTATGTAGCAGCTTTTGATTCCCTG...CTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR GCA 90 bp | AATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTGCAGAGAGCTTGGTCAGGTTGCCTCTTTTGCTaGAGCAATCAGTGGAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NTRPFAESKHVHLQRAWSGCLFC*SNQWSQ Trigger: CTGACTCCACTGATTGCTGCAGCAAAAGAGGCAACC...TGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAAGAAGGCTTGGCACATaGGGCTGGGATGAGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ITRPVAILFSARQFPRIKRRLGT*GWDERG Trigger: ACCACGCTCATCCCAGCCTCATGTGCCAAGCCTTCT...TTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACTTCTCACACTTCTCTTACTCAGCATGTGCTCTAGGAAATCTCTCAATGGGAGAACCAAAACCATaGGGAGGGCAGGAGGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SDFSHFSYSACALGNLSMGEPKP*GGQEVA Trigger: TGCTACCTCCTGCCCTCCTCATGGTTTTGGTTCTCC...CATTGAGAGATTTCCTAGAGCACATGCTGAGTAAGAGAAGTGTGAGAAGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGAATCAAAAGCTGCTACATAGCTAAGACCATTTCACTAGAAATAGCACAGGCCTCTTCCTGTCCCTaGCAGATTATCAGGCCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: QGIKSCYIAKTISLEIAQASSCP*QIIRPR Trigger: ACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGC...CTGTGCTATTTCTAGTGAAATGGTCTTAGCTATGTAGCAGCTTTTGATTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTAGAAACAGAGGCTGAGATCTTGAAATATCACACAAGTATAGCCGGACAGGTCCCGGAAAATAGCTaGCAACTTCTCTGGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVETEAEILKYHTSIAGQVPENS*QLLWVL Trigger: CAGAACCCAGAGAAGTTGTCAGCTATTTTCCGGGAC...CTGTCCGGCTATACTTGTGTGATATTTCAAGATCTCAGCCTCTGTTTCTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | AATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTGCAGAGAGCTTGGTCAACACAAAGAAAAACATaGTCGTTCTCCCATGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTRPFAESKHVHLQRAWSTQRKT*SFSHVR Trigger: CCTGACATGGGAGAACGACCATGTTTTTCTTTGTGT...TGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATCACACAAGTATAGCCGGACAGGTGCTGAAGCCAGCCATGTGCTAAAAGTAAACACTACTGGGTCATaGTTCTCCAAAACAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ISHKYSRTGAEASHVLKVNTTGS*FSKTAA Trigger: AGCAGCTGTTTTGGAGAACCATGACCCAGTAGTGTT...TACTTTTAGCACATGGCTGGCTTCAGCACCTGTCCGGCTATACTTGTGTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGAGAAATGGCCTCTGCTaGATTACTCGTCCAGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKRNGLC*ITRPVA Trigger: TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCT...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CAA 90 bp | GGGAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTaGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: GNSYLEMASAGLLVQ*QFSSVLDSFQGSKS Trigger: AGACTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTAAGACCATTTCACTAGAAATAGCACAGGGAACACTACTGGGTCATGGTTCTAGGGGTCGGAGTTCCTaGAACAAGTGTTTATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AKTISLEIAQGTLLGHGSRGRSS*NKCLFH Trigger: ATGAAATAAACACTTGTTTCAGGAACTCCGACCCCT...AGAACCATGACCCAGTAGTGTTCCCTGTGCTATTTCTAGTGAAATGGTCTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGAGCATTTAGAAATGGCCTCTaGTGGATTACTCGTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VAILFSARQFPRIKVLGAFRNGL*WITRPV Trigger: AACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAA...TGCTCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTTTAGAAATGGCCTCTaGTGGATTACTCGTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKFRNGL*WITRPV Trigger: AACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAA...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 72 bp | GGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTaGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GHGSGNRASSCP*QIIRPRGISKL Trigger: CAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTTCTTGGTTGCCTCTTTaGCTGCAGCAATCAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHQGHGSGNRASSCPWQISWLPL*LQQSVE Trigger: CTCCACTGATTGCTGCAGCAAAAGAGGCAACCAAGA...AATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCCAAGGATCAAAGTCTaGGGAGCACTAGATCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RETEPLPVPGRLSGPVAFPRIKV*GALDQE Trigger: TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGG...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCCAAAGTCAGTTAACTaGACAGAGCCATCCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RETEPLPVPGRLSGPVAFPKSVN*TEPSIP Trigger: GGGAATGGATGGCTCTGTCAAGTTAACTGACTTTGG...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATAGTGATTGTTCTTGGTaGCCTCTTTTGCTGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLPVPGRLSGPVAFQSCYSDCSW*PLLLQQ Trigger: TTGCTGCAGCAAAAGAGGCAACCAAGAACAATCACT...ATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR TCA 72 bp | GCCAGCCATGTGCTAAAAGTAGCTGCACTTTCCCTCTaGCTTCTCACACTTCTCTTACTCAGCATGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASHVLKVAALSL*LLTLLLLSMCS Trigger: AGAGCACATGCTGAGTAAGAGAAGTGTGAGAAGTCAGAGGGAAAGTGCAGCTACTTTTAGCACATGGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAAATGGGAGAAGCAAGGAAACCATGGTGCTCCTTTaGCTCTGCTCTGGAGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SKDQSLGSTRSGNGRSKETMVLL*LCSGVI Trigger: GATAACTCCAGAGCAGAGCAAAAGGAGCACCATGGT...TTCCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAGAAACAGAGGCTGAGATCTTGAAATATCACACAAGTATAGCCGGACAGAGCTCTGGCGTCCCATaGGTAGCAATGAGGTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVETEAEILKYHTSIAGQSSGVP*VAMRYK Trigger: CTTGTACCTCATTGCTACCAATGGGACGCCAGAGCT...CTGTCCGGCTATACTTGTGTGATATTTCAAGATCTCAGCCTCTGTTTCTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCACCAAGGATCAAAGTCTaGGGAGCACTAGATCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GREFLFRNGLCWITRPVAPRIKV*GALDQE Trigger: TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGG...TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTAAGACCATTTCACTAGAAATAGCACAGGGAACACTACTGGGTCATGGTTCTAGTAAGCATGTCCACTaGCAGAGAGCTTGGTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: AKTISLEIAQGTLLGHGSSKHVH*QRAWSC Trigger: GCATGACCAAGCTCTCTGCAAGTGGACATGCTTACT...AGAACCATGACCCAGTAGTGTTCCCTGTGCTATTTCTAGTGAAATGGTCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR GCA 72 bp | CTGTTTCGTAGAAACAGGTTTATTCGGGTAAACCCTTaGTCATCAGTTCCCTCCATGCCCACAAACTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFRRNRFIRVNP*SSVPSMPTNWK Trigger: CTTCCAGTTTGTGGGCATGGAGGGAACTGATGAGCAAGGGTTTACCCGAATAAACCTGTTTCTACGAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR GCA 72 bp | ATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTaGAGAGAGCTTGGTCATGCACTTAAAAACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IRVHLQRVSMST*RELGHALKNRV Trigger: GACCCTGTTTTTAAGTGCATGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTCAGGCCCAAGGATCAAAGTCTaGGGAGCACTAGATCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRGISKLLWFSNTMRCSGPRIKV*GALDQE Trigger: TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGG...GCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 72 bp | AGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTaGCATTTCAAAGCTGTTATGGTTTTCAAATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLFLSLADYQAP*HFKAVMVFKYN Trigger: ATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 72 bp | ACTGGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTaGATTACTCGTCCAGTTGCAATTCTCTTCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGREFLFRNGLC*ITRPVAILFSA Trigger: AGCACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 72 bp | TTCACTAGAAATAGCACAGGGAACACTACTGGGTCATaGTTCTCCAAAACAGCTGCTAGAAGCACACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: FTRNSTGNTTGS*FSKTAARSTHK Trigger: TTTGTGTGTGCTTCTAGCAGCTGTTTTGGAGAACCATGACCCAGTAGTGTTCCCTGTGCTATTTCTAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR GCA 72 bp | CAAACTGGAAGGGAATTCCTATTTAGAAATGGCCTCTaGTGGATTACTCGTCCAGTTGCAATTCTCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTGREFLFRNGL*WITRPVAILFS Trigger: ACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCCAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| 3UTR CCA 72 bp | CAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATaGTTTTCAAATACAATGAGGTGTTCAGGCAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: QIIRPRGISKLL*FSNTMRCSGNL Trigger: TAAATTGCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAGCGAGCCCACTGTTCTaGCATTCCCGTAAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCTKGMVRETEPLPVPGRASPLF*HSRKLP Trigger: GGGGAGTTTACGGGAATGCCAGAACAGTGGGCTCGC...TCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAGAGGTTTGGAGCCGTaGTTTAGGGTTCCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLHQGHGSGNRASSCPWQRGLEP*FRVPVS Trigger: AGACACTGGAACCCTAAACCACGGCTCCAAACCTCT...CTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCTTCTCCTCTGGGTTTaGAGGCAGAGGTTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RETEPLPVPGRLSGPVAFLLLWV*RQRFGA Trigger: GGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAAG...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTCTTCTCCTCTGGGTTTaGAGGCAGAGGTTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGHGSGNRASSCPWQILLLWV*RQRFGA Trigger: GGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAAG...AATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGTGGGTTCTGAAGCTCTaGCGTCCCATTGGTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLHQGHGSGNRASSCPWQWVLKL*RPIGSN Trigger: ATTGCTACCAATGGGACGCCAGAGCTTCAGAACCCA...CTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGGTCCCGGAAAATAGCTaGCAACTTCTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WFGKQSLFLSLADYQAPWVPENS*QLLWVL Trigger: CAGAACCCAGAGAAGTTGTCAGCTATTTTCCGGGAC...CCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCTGGGTCCATAGGCCTTaGGTGTCACAACTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRISCTKGMVRETEPLPVWVHRP*VSQLQV Trigger: CACCTGAAGTTGTGACACGCAAGGCCTATGGACCCA...GACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAGGTTGCCTCTTTTGCTaGAGCAATCAGTGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCTKGMVRETEPLPVPGRGCLFC*SNQWSQ Trigger: CTGACTCCACTGATTGCTGCAGCAAAAGAGGCAACC...TCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTTGGAGGCAGAGGTTTaGAGCCGTGGTTTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGILEAEV*SRGLGF Trigger: GAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAA...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAAGCAATCACTGGAGGTaGGGTAGCATCGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCTKGMVRETEPLPVPGRSNHWR*GSIVII Trigger: GATGATGACGATGCTACCCCACCTCCAGTGATTGCT...TCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCCGGGTCAAAGCATCTaGCGGAGTGGTGTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RETEPLPVPGRLSGPVAFPGQSI*RSGVIL Trigger: GAGAATAACACCACTCCGCCAGATGCTTTGACCCGG...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCGCTGGGGGTTTGTCCTaGATGTCTACGCCGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPMSGSAAPRAWFGKQSLAGGLS*MSTPLF Trigger: AAATAACGGCGTAGACATCCAGGACAAACCCCCAGC...GAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCAGAGGTTTGGAGCCGTaGTTTAGGGTTCCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPMSGSAAPRAWFGKQSLRGLEP*FRVPVS Trigger: AGACACTGGAACCCTAAACCACGGCTCCAAACCTCT...GAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCTTGGAGGCAGAGGTTTaGAGCCGTGGTTTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGMVRETEPLPVPGRLSGLEAEV*SRGLGF Trigger: GAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAA...GCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTAGCAATCACTGGAGGTaGGGTAGCATCGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPCQDQLHQGHGSGNRASSNHWR*GSIVII Trigger: GATGATGACGATGCTACCCCACCTCCAGTGATTGCT...AGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTAGCCACATCCCGAGTTaGAGTAACAGGAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HGSGNRASSCPWQIIRPRSHIPS*SNRKWF Trigger: GAACCACTTCCTGTTACTCCAACTCGGGATGTGGCT...ACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | GCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCCGGGTCAAAGCATCTaGCGGAGTGGTGTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APRAWFGKQSLFLSLADYPGQSI*RSGVIL Trigger: GAGAATAACACCACTCCGCCAGATGCTTTGACCCGG...ATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTGCAATCTTCAGGAACTaGTGCTGCAGCAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGIAIFRN*CCSSSL Trigger: TAAAGAGCTGCTGCAGCATCAGTTCCTGAAGATTGC...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCATGGTGCTCCTTTTaGTCTGCTCTGGAGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: VRISCTKGMVRETEPLPVPWCSF*SALELS Trigger: AGATAACTCCAGAGCAGAGCAAAAGGAGCACCATGG...GACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | GCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATGCTGGGGGTTTGTCCTaGATGTCTACGCCGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: APRAWFGKQSLFLSLADYAGGLS*MSTPLF Trigger: AAATAACGGCGTAGACATCCAGGACAAACCCCCAGC...ATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTGCGTGGAGCAATCACTaGAGGTGGGGTAGCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTWSFSHVRISCTKGMVAWSNH*RWGSIV Trigger: GACGATGCTACCCCACCTCCAGTGATTGCTCCACGC...AACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCGTGATATTTGATGTTTaGAGCAAGCGAGCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPMSGSAAPRAWFGKQSLVIFDV*SKRAHC Trigger: ACAGTGGGCTCGCTTGCTTCAAACATCAAATATCAC...GAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTGTGATATTTGATGTTTaGAGCAAGCGAGCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGIVIFDV*SKRAHC Trigger: ACAGTGGGCTCGCTTGCTTCAAACATCAAATATCAC...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTCAAAGTCAGTTAACTTaGCAGAGCCATCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGIQSQLT*QSHPFP Trigger: TGGGAATGGATGGCTCTGTCAAGTTAACTGACTTTG...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | GCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCCATGGTGCTCCTTTTaGTCTGCTCTGGAGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: APRAWFGKQSLFLSLADYPWCSF*SALELS Trigger: AGATAACTCCAGAGCAGAGCAAAAGGAGCACCATGG...ATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTTGTCACAACTTCAGGTaGCATCCAATATGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RETEPLPVPGRLSGPVAFCHNFR*HPIWSS Trigger: GGAACTCCATATTGGATGGCACCTGAAGTTGTGACA...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | AATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTGCAGAGAGCTTGGTCAGCGAGCCCACTGTTCTaGCATTCCCGTAAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTRPFAESKHVHLQRAWSASPLF*HSRKLP Trigger: GGGGAGTTTACGGGAATGCCAGAACAGTGGGCTCGC...TGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTGTGTGTTCTGGGCGTaGAGCAATCACTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKHGRSPMSGSAAPRAWCVFWA*SNHWRW Trigger: CCACCTCCAGTGATTGCTCCACGCCCAGAACACACA...CCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | CGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCTCTTGATGTCCCTGTaGATGACTTGGTTTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RETEPLPVPGRLSGPVAFLLMSL*MTWFEC Trigger: ACATTCAAACCAAGTCATTCACAGGGACATCAAGAG...AAATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCTGGGTCCATAGGCCTTaGGTGTCACAACTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLADYQAPWHFKAVMVFWVHRP*VSQLQV Trigger: CACCTGAAGTTGTGACACGCAAGGCCTATGGACCCA...GAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTATCTCCAGGTAAGATaGATCGATAAAACCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGIYLQVR*IDKTGP Trigger: AGGACCGGTTTTATCGATCCATCTTACCTGGAGATA...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | AAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGCTCTTGATGTCCCTGTaGATGACTTGGTTTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KHGRSPMSGSAAPRAWFGLLMSL*MTWFEC Trigger: ACATTCAAACCAAGTCATTCACAGGGACATCAAGAG...CCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCGTCCCGGAAAATAGCTaGCAACTTCTCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLADYQAPWHFKAVMVFVPENS*QLLWVL Trigger: CAGAACCCAGAGAAGTTGTCAGCTATTTTCCGGGAC...GAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGAAACAGAGGCTGAGATCTTGAAATATCACACAAGTATAGCCGGACAGGCGAGCCCACTGTTCTaGCATTCCCGTAAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVETEAEILKYHTSIAGQASPLF*HSRKLP Trigger: GGGGAGTTTACGGGAATGCCAGAACAGTGGGCTCGC...CTGTCCGGCTATACTTGTGTGATATTTCAAGATCTCAGCCTCTGTTTCTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| CDS-3UTR CCA 90 bp | AAGCACACACAAAGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCCCACCTCCTGCCCTGTaGCTACATCCATTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KHTQRKTWSFSHVRISCTPPPAL*LHPLQY Trigger: ATACTGCAATGGATGTAGCCACAGGGCAGGAGGTGG...GGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCTTTGTGTGTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTAAACTCATGTACTTCTaGCTATTGGAGGTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASSCPWQIIRPRGIKLMYF*LLEVFL Trigger: TAAGAAGACCTCCAATAGTCAGAAGTACATGAGTTT...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAATGGGGCTGGCATGACAAGCCACAATGCTGGCCAAGCATCCTACCACAGAAACTCATGTACTTCTaGCTATTGGAGGTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQWGWHDKPQCWPSILPQKLMYF*LLEVFL Trigger: TAAGAAGACCTCCAATAGTCAGAAGTACATGAGTTT...CTGTGGTAGGATGCTTGGCCAGCATTGTGGCTTGTCATGCCAGCCCCATTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGAAACAGAGGCTGAGATCTTGAAATATCACACAAGTATAGCCGGACAGCTTCTCCTCTGGGTTTaGAGGCAGAGGTTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVETEAEILKYHTSIAGQLLLWV*RQRFGA Trigger: GGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAAG...CTGTCCGGCTATACTTGTGTGATATTTCAAGATCTCAGCCTCTGTTTCTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTCTCACACTTCTCTTACTCAGCATGTGCTCTAGGAAATCTCTCAATGGCGTGGAGCAATCACTaGAGGTGGGGTAGCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSHFSYSACALGNLSMAWSNH*RWGSIV Trigger: GACGATGCTACCCCACCTCCAGTGATTGCTCCACGC...CATTGAGAGATTTCCTAGAGCACATGCTGAGTAAGAGAAGTGTGAGAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033040.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTAGATTTTGTGTGTTCTaGGCGTGGAGCAATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKTWSFSHVRISCTKGMVRFCVF*AWSNHW Trigger: CCAGTGATTGCTCCACGCCCAGAACACACAAAATCT...AACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAAATGGGAGAAGCAAGGCCACCTCCTGCCCTGTaGCTACATCCATTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FPRIKVLGALDQEMGEARPPPAL*LHPLQY Trigger: ATACTGCAATGGATGTAGCCACAGGGCAGGAGGTGG...CCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAATGCTGCAGCAATCAGTaGAGTCAGGCTAGAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSARQFPRIKVLGALDQECCSNQ*SQAREG Trigger: CCCCTCTCTAGCCTGACTCCACTGATTGCTGCAGCA...TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTCAGGCTGCTGCAGCAATCAGTaGAGTCAGGCTAGAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGISKLLWFSNTMRCSGCCSNQ*SQAREG Trigger: CCCCTCTCTAGCCTGACTCCACTGATTGCTGCAGCA...GCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAATTGGAGGCAGAGGTTTaGAGCCGTGGTTTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSARQFPRIKVLGALDQELEAEV*SRGLGF Trigger: GAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAA...TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGACACTGGTGGTACTGCTaGGGTCTCAGACACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVAILFSARQFPRIKVLGHWWYC*GLRHSL Trigger: AAGACTGTGTCTGAGACCCCAGCAGTACCACCAGTG...TCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGAGCACCACCTCCTGCCCTGTaGCTACATCCATTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VAILFSARQFPRIKVLGAPPPAL*LHPLQY Trigger: ATACTGCAATGGATGTAGCCACAGGGCAGGAGGTGG...TGCTCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGCACTGGTGGTACTGCTaGGGTCTCAGACACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKHWWYC*GLRHSL Trigger: AAGACTGTGTCTGAGACCCCAGCAGTACCACCAGTG...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAAGATTTTGTGTGTTCTaGGCGTGGAGCAATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GREFLFRNGLCWITRPVARFCVF*AWSNHW Trigger: CCAGTGATTGCTCCACGCCCAGAACACACAAAATCT...TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| 3UTR CAA 72 bp | GGAGTTCCTGAAACAAGTGTTTATTTCATAGAAGGCTaGGCACATGAGGCTGGGATGAGCGTGGTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPETSVYFIEG*AHEAGMSVVSV Trigger: CACTGAAACCACGCTCATCCCAGCCTCATGTGCCAAGCCTTCTATGAAATAAACACTTGTTTCAGGAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| CDS-3UTR TCA 90 bp | CCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTCAGGCGCAATCTTCAGGAACTaGTGCTGCAGCAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PRGISKLLWFSNTMRCSGAIFRN*CCSSSL Trigger: TAAAGAGCTGCTGCAGCATCAGTTCCTGAAGATTGC...GCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGGGTTGCCTCTTTTGCTaGAGCAATCAGTGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKGCLFC*SNQWSQ Trigger: CTGACTCCACTGATTGCTGCAGCAAAAGAGGCAACC...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAATTCTCTTCAGCTGGGGGTTTGTCCTaGATGTCTACGCCGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYLEMASAGLLVQLQFSSAGGLS*MSTPLF Trigger: AAATAACGGCGTAGACATCCAGGACAAACCCCCAGC...TGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGTGGGTTCTGAAGCTCTaGCGTCCCATTGGTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKWVLKL*RPIGSN Trigger: ATTGCTACCAATGGGACGCCAGAGCTTCAGAACCCA...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCTAGACAGTTTCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAAGTGATATTTGATGTTTaGAGCAAGCGAGCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSARQFPRIKVLGALDQEVIFDV*SKRAHC Trigger: ACAGTGGGCTCGCTTGCTTCAAACATCAAATATCAC...TTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGAAACTGTCTAGCACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTAGAAACAGAGGCTGAGATCTTGAAATATCACACAAGTATAGCCGGACAGTTGCAGTATACACTGTaGCTGAAGCACCTTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVETEAEILKYHTSIAGQLQYTL*LKHLVQ Trigger: TTGGACAAGGTGCTTCAGGCACAGTGTATACTGCAA...CTGTCCGGCTATACTTGTGTGATATTTCAAGATCTCAGCCTCTGTTTCTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033040.12 |
||
| CDS-3UTR GCA 90 bp | GCTAAGACCATTTCACTAGAAATAGCACAGGGAACACTACTGGGTCATGGTTCTTTGCAGTATACACTGTaGCTGAAGCACCTTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKTISLEIAQGTLLGHGSLQYTL*LKHLVQ Trigger: TTGGACAAGGTGCTTCAGGCACAGTGTATACTGCAA...AGAACCATGACCCAGTAGTGTTCCCTGTGCTATTTCTAGTGAAATGGTCTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAAATGGGAGAAGCAAGGAATATCTCCAGGTAAGATaGATCGATAAAACCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDQSLGSTRSGNGRSKEYLQVR*IDKTGP Trigger: AGGACCGGTTTTATCGATCCATCTTACCTGGAGATA...TTCCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAATCAAAAGCTGCTACATAGCTAAGACCATTTCACTAGAAATAGCACAGAGCCACATCCCGAGTTaGAGTAACAGGAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGIKSCYIAKTISLEIAQSHIPS*SNRKWF Trigger: GAACCACTTCCTGTTACTCCAACTCGGGATGTGGCT...CTGTGCTATTTCTAGTGAAATGGTCTTAGCTATGTAGCAGCTTTTGATTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | GCTAAGACCATTTCACTAGAAATAGCACAGGGAACACTACTGGGTCATGGTTCTTTCTTCGGCTGCTGCTaGAGATTCATCTGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: AKTISLEIAQGTLLGHGSFFGCC*RFICLM Trigger: CATTAAACAGATGAATCTTCAGCAGCAGCCGAAGAA...AGAACCATGACCCAGTAGTGTTCCCTGTGCTATTTCTAGTGAAATGGTCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | TTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAAGCAAAGTCAGTTAACTTaGCAGAGCCATCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVQLQFSSVLDSFQGSKQSQLT*QSHPFP Trigger: TGGGAATGGATGGCTCTGTCAAGTTAACTGACTTTG...CTTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| 3UTR CAA 72 bp | TATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTaGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLEMASAGLLVQ*QFSSVLDSFQG Trigger: TCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAATTCTCTTCTTCGGCTGCTGCTaGAGATTCATCTGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: EFLFRNGLCWITRPVAILFFGCC*RFICLM Trigger: CATTAAACAGATGAATCTTCAGCAGCAGCCGAAGAA...GAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAATTCTCTTGCAGTATACACTGTaGCTGAAGCACAAAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EFLFRNGLCWITRPVAILLQYTL*LKHKVL Trigger: TAACACTTTGTGCTTCAGGCACAGTGTATACTGCAA...GAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| CDS-3UTR CCA 90 bp | CAGGGAATCAAAAGCTGCTACATAGCTAAGACCATTTCACTAGAAATAGCACAGTATCTCCAGGTAAGATaGATCGATAAAACCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGIKSCYIAKTISLEIAQYLQVR*IDKTGP Trigger: AGGACCGGTTTTATCGATCCATCTTACCTGGAGATA...CTGTGCTATTTCTAGTGAAATGGTCTTAGCTATGTAGCAGCTTTTGATTCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCTTTGGAGGCAGAGGTTaGGAGCCGTGGTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSGNRASSCPWQIIRPRGFGGRG*EPWFRV Trigger: AACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAA...GCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTTTGGAGGCAGAGGTTaGGAGCCGTGGTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCQDQLHQGHGSGNRASFGGRG*EPWFRV Trigger: AACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAA...AGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGAACCATGGTGCTCCTTTaGCTCTGCTCTGGAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: SCTKGMVRETEPLPVPGRTMVLL*LCSGVI Trigger: GATAACTCCAGAGCAGAGCAAAAGGAGCACCATGGT...TCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCTCAAAGGGTTTTCATaGAGGTATGGGGGCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSHVRISCTKGMVRETELKGFS*RYGGSP Trigger: GGGGGAGCCCCCATACCTCAATGAAAACCCTTTGAG...CTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAGGAGGGGCTGGGGGTTaGTCCTGGATGTCTACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GREFLFRNGLCWITRPVAGGAGG*SWMSTP Trigger: CGGCGTAGACATCCAGGACAAACCCCCAGCCCCTCC...TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAGGGTTCCAGTGTCTTaGCTGCCGGCTCCAATCATA | + |
|
Preference number: 5 (lower is better) Translates to: KHGRSPMSGSAAPRAWFGRVPVS*LPAPII Trigger: TATGATTGGAGCCGGCAGCAAAGACACTGGAACCCT...CCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTCTGTGGCTACATCCATaGCAGTATACACTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGNRASSCPWQIIRPRGILWLHP*QYTLCL Trigger: CAGGCACAGTGTATACTGCAATGGATGTAGCCACAG...AATGCCACGGGGCCTGATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGAGCTCTGGCGTCCCATaGGTAGCAATGAGGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFSHVRISCTKGMVRETESSGVP*VAMRYK Trigger: CTTGTACCTCATTGCTACCAATGGGACGCCAGAGCT...CTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCTCTTGGTTGCCTCTTTaGCTGCAGCAATCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRISCTKGMVRETEPLPVSWLPL*LQQSVE Trigger: CTCCACTGATTGCTGCAGCAAAAGAGGCAACCAAGA...GACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTCAGGCGGAGGGGCTGGGGGTTaGTCCTGGATGTCTACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PRGISKLLWFSNTMRCSGGGAGG*SWMSTP Trigger: CGGCGTAGACATCCAGGACAAACCCCCAGCCCCTCC...GCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTAGTGATTGTTCTTGGTaGCCTCTTTTGCTGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPCQDQLHQGHGSGNRASSDCSW*PLLLQQ Trigger: TTGCTGCAGCAAAAGAGGCAACCAAGAACAATCACT...AGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 90 bp | TTCTTTTTCTTCTCCTCTGGGTTTGGAGGCAGAGGTTTGGAGCCGTaGTTTAGGGTTCCAGTGTCTTTGCTGCCGGCTCCAATCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFFFSSGFGGRGLEP*FRVPVSLLPAPIIV Trigger: CACTATGATTGGAGCCGGCAGCAAAGACACTGGAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAAGAAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206351.2 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAAGGGCATGGTTAGGGTTCCAGTGTCTTaGCTGCCGGCTCCAATCATA | + |
|
Preference number: 5 (lower is better) Translates to: RKTWSFSHVRISCTKGMVRVPVS*LPAPII Trigger: TATGATTGGAGCCGGCAGCAAAGACACTGGAACCCT...AACCATGCCCTTGGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GCACCAAGGGCATGGTTCGGGAAACAGAGCCTCTTCCTGTCCCTGGCAGATTATGTGTATATACAGATTTaGTGTGTTCTGGGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: APRAWFGKQSLFLSLADYVYIQI*CVLGVE Trigger: CTCCACGCCCAGAACACACAAAATCTGTATATACAC...ATAATCTGCCAGGGACAGGAAGAGGCTCTGTTTCCCGAACCATGCCCTTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AAGCACACACAAAGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAGGGTTCCAGTGTCTTaGCTGCCGGCTCCAATCATA | + |
|
Preference number: 5 (lower is better) Translates to: KHTQRKTWSFSHVRISCTRVPVS*LPAPII Trigger: TATGATTGGAGCCGGCAGCAAAGACACTGGAACCCT...GGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCTTTGTGTGTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCCTGTGGCTACATCCATaGCAGTATACACTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLADYQAPWHFKAVMVFLWLHP*QYTLCL Trigger: CAGGCACAGTGTATACTGCAATGGATGTAGCCACAG...GAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AATACGCGTCCATTTGCAGAGAGTAAGCATGTCCACTTGCAGAGAGCTTGGTCAAGCTCTGGCGTCCCATaGGTAGCAATGAGGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTRPFAESKHVHLQRAWSSSGVP*VAMRYK Trigger: CTTGTACCTCATTGCTACCAATGGGACGCCAGAGCT...TGACCAAGCTCTCTGCAAGTGGACATGCTTACTCTCTGCAAATGGACGCGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033040.12 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGATCAAAGTCTTGGGAGCACTAGATCAGGAAATGGGAGAAGCAAGGAATTTGGAGGCAGAGGTTaGGAGCCGTGGTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKDQSLGSTRSGNGRSKEFGGRG*EPWFRV Trigger: AACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAA...TTCCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTGATCCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCTGGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCCCAAAGTCAGTTAACTaGACAGAGCCATCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLADYQAPWHFKAVMVFPKSVN*TEPSIP Trigger: GGGAATGGATGGCTCTGTCAAGTTAACTGACTTTGG...GAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCCAGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAATTCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCACCAAAGTCAGTTAACTaGACAGAGCCATCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GREFLFRNGLCWITRPVAPKSVN*TEPSIP Trigger: GGGAATGGATGGCTCTGTCAAGTTAACTGACTTTGG...TGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGAATTCCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAATGAGGTGTTCAGGCACCATGGTGCTCCTTTaGCTCTGCTCTGGAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PRGISKLLWFSNTMRCSGTMVLL*LCSGVI Trigger: GATAACTCCAGAGCAGAGCAAAAGGAGCACCATGGT...GCCTGAACACCTCATTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | ATTACTCGTCCAGTTGCAATTCTCTTCAGTGCTAGACAGTTTCCAAGGATCAAACTCAAAGGGTTTTCATaGAGGTATGGGGGCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITRPVAILFSARQFPRIKLKGFS*RYGGSP Trigger: GGGGGAGCCCCCATACCTCAATGAAAACCCTTTGAG...TTTGATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | AAGCACACACAAAGAAAAACATGGTCGTTCTCCCATGTCAGGATCAGCTGCACCAGTGATTGTTCTTGGTaGCCTCTTTTGCTGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KHTQRKTWSFSHVRISCTSDCSW*PLLLQQ Trigger: TTGCTGCAGCAAAAGAGGCAACCAAGAACAATCACT...GGTGCAGCTGATCCTGACATGGGAGAACGACCATGTTTTTCTTTGTGTGTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 90 bp | TTCAATCACAGATCGTGTATATACAGATTTTGTGTGTTCTGGGCGTaGAGCAATCACTGGAGGTGGGGTAGCATCGTCATCATCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNHRSCIYRFCVFWA*SNHWRWGSIVIIIF Trigger: GAAGATGATGATGACGATGCTACCCCACCTCCAGTGATTGCTCCACGCCCAGAACACACAAAATCTGTATATACACGATCTGTGATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 90 bp | TTTAGGCTTCTTCTTCTGTTTTTCCGTGTTCCGGGTCAAAGCATCTaGCGGAGTGGTGTTATTCTCAGTAGGAGAAATAGGAGATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLLLLFFRVPGQSI*RSGVILSRRNRRCS Trigger: GCTACATCTCCTATTTCTCCTACTGAGAATAACACCACTCCGCCAGATGCTTTGACCCGGAACACGGAAAAACAGAAGAAGAAGCCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGATTATCAGGCCCCGTGGCATTTCAAAGCTGTTATGGTTTTCAAATACAACTGTGGCTACATCCATaGCAGTATACACTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLSGPVAFQSCYGFQIQLWLHP*QYTLCL Trigger: CAGGCACAGTGTATACTGCAATGGATGTAGCCACAG...TTGTATTTGAAAACCATAACAGCTTTGAAATGCCACGGGGCCTGATAATCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGAATCAAAAGCTGCTACATAGCTAAGACCATTTCACTAGAAATAGCACAGTCTTGGTTGCCTCTTTaGCTGCAGCAATCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGIKSCYIAKTISLEIAQSWLPL*LQQSVE Trigger: CTCCACTGATTGCTGCAGCAAAAGAGGCAACCAAGA...CTGTGCTATTTCTAGTGAAATGGTCTTAGCTATGTAGCAGCTTTTGATTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS-3UTR CAA 90 bp | TCCTATTTAGAAATGGCCTCTGCTGGATTACTCGTCCAGTTGCAATTCTCTTCAGTGTATATACAGATTTaGTGTGTTCTGGGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYLEMASAGLLVQLQFSSVYIQI*CVLGVE Trigger: CTCCACGCCCAGAACACACAAAATCTGTATATACAC...TGAAGAGAATTGCAACTGGACGAGTAATCCAGCAGAGGCCATTTCTAAATAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 90 bp | GTTATTCTCAGTAGGAGAAATAGGAGATGTAGCCACATCCCGAGTTaGAGTAACAGGAAGTGGTTCAATCACAGATCGTGTATATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VILSRRNRRCSHIPS*SNRKWFNHRSCIYR Trigger: TCTGTATATACACGATCTGTGATTGAACCACTTCCTGTTACTCCAACTCGGGATGTGGCTACATCTCCTATTTCTCCTACTGAGAATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS TCA 90 bp | ACTGTGCCTGAAGCACAAAGTGTTAGAAGAATTATAATCTTCAGCTaGCTTATCTGTAAAACTCATGTACTTCTGACTATTGGAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVPEAQSVRRIIIFS*LICKTHVLLTIGGL Trigger: AAGACCTCCAATAGTCAGAAGTACATGAGTTTTACAGATAAGTCAGCTGAAGATTATAATTCTTCTAACACTTTGTGCTTCAGGCACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156637.3 |
||
| CDS CCA 72 bp | TTCTCCTCTGGGTTTGGAGGCAGAGGTTTGGAGCCGTaGTTTAGGGTTCCAGTGTCTTTGCTGCCGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSSGFGGRGLEP*FRVPVSLLPAP Trigger: TGGAGCCGGCAGCAAAGACACTGGAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206351.2 ENSMUST00000206984.2 |
||
| CDS CAA 90 bp | TTTGGAGGCAGAGGTTTGGAGCCGTGGTTTAGGGTTCCAGTGTCTTaGCTGCCGGCTCCAATCATAGTGCTGGTGTTTCTCATCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FGGRGLEPWFRVPVS*LPAPIIVLVFLIGG Trigger: CCCTCCGATGAGAAACACCAGCACTATGATTGGAGCCGGCAGCAAAGACACTGGAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206351.2 ENSMUST00000206984.2 |
||
| CDS CAA 90 bp | AACCGGTCCTTCTTTTTCTTCTCCTCTGGGTTTGGAGGCAGAGGTTaGGAGCCGTGGTTTAGGGTTCCAGTGTCTTTGCTGCCGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NRSFFFFSSGFGGRG*EPWFRVPVSLLPAP Trigger: TGGAGCCGGCAGCAAAGACACTGGAACCCTAAACCACGGCTCCAAACCTCTGCCTCCAAACCCAGAGGAGAAGAAAAAGAAGGACCGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206351.2 ENSMUST00000206984.2 |
||
| CDS CAA 72 bp | AGAGGTTTGGAGCCGTGGTTTAGGGTTCCAGTGTCTTaGCTGCCGGCTCCAATCATAGTGCTGGTGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLEPWFRVPVS*LPAPIIVLVFL Trigger: GAGAAACACCAGCACTATGATTGGAGCCGGCAGCAAAGACACTGGAACCCTAAACCACGGCTCCAAACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033040.12 ENSMUST00000156637.3 ENSMUST00000206351.2 ENSMUST00000206984.2 |
||
| CDS CCA 72 bp | TACAGATTTTGTGTGTTCTGGGCGTGGAGCAATCACTaGAGGTGGGGTAGCATCGTCATCATCATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YRFCVFWAWSNH*RWGSIVIIIFI Trigger: GATGAAGATGATGATGACGATGCTACCCCACCTCCAGTGATTGCTCCACGCCCAGAACACACAAAATCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 72 bp | AGATCGTGTATATACAGATTTTGTGTGTTCTGGGCGTaGAGCAATCACTGGAGGTGGGGTAGCATCGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RSCIYRFCVFWA*SNHWRWGSIVI Trigger: GATGACGATGCTACCCCACCTCCAGTGATTGCTCCACGCCCAGAACACACAAAATCTGTATATACACGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 72 bp | AATCACAGATCGTGTATATACAGATTTTGTGTGTTCTaGGCGTGGAGCAATCACTGGAGGTGGGGTAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: NHRSCIYRFCVF*AWSNHWRWGSI Trigger: GATGCTACCCCACCTCCAGTGATTGCTCCACGCCCAGAACACACAAAATCTGTATATACACGATCTGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 72 bp | CTTCTTCTGTTTTTCCGTGTTCCGGGTCAAAGCATCTaGCGGAGTGGTGTTATTCTCAGTAGGAGAAATAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLFFRVPGQSI*RSGVILSRRNR Trigger: CCTATTTCTCCTACTGAGAATAACACCACTCCGCCAGATGCTTTGACCCGGAACACGGAAAAACAGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||
| CDS CCA 72 bp | AGTAGGAGAAATAGGAGATGTAGCCACATCCCGAGTTaGAGTAACAGGAAGTGGTTCAATCACAGATCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRRNRRCSHIPS*SNRKWFNHRSC Trigger: ACACGATCTGTGATTGAACCACTTCCTGTTACTCCAACTCGGGATGTGGCTACATCTCCTATTTCTCCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033040.12 ENSMUST00000206984.2 |
||