Pregenerated sensors for PAIP2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045896Ensembl transcript IDs: ENSMUST00000058383.9
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCATAGTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCTaGCTCCTTGAGGGTGCTAGTGCAAGCTCAGGGCTGTTTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: AIVPIKRSTLASPLS*LLEGASASSGLFAC Trigger: GCAGGCAAACAGCCCTGAGCTTGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGACTATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | CATCTGTCTTTAACTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTaGGAACAGCTCAAGGGTAGGACTAACCTGGCACAAGTGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: HLSLTAGAVFKSREG*EQLKGRTNLAQVRL Trigger: GAGTCTCACTTGTGCCAGGTTAGTCCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR GCA 90 bp | CTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTAGCAAACGGATaGCCTCCATTCCTGTTTTCCCAGAGGAGAATGGCTGGGATGAGC | + |
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Preference number: 1 (lower is better) Translates to: LLHISILSSVCLANG*PPFLFSQRRMAGMS Trigger: GCTCATCCCAGCCATTCTCCTCTGGGAAAACAGGAATGGAGGGCATCCGTTTGCTAAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | CTCAGTCCTCTCCTTCCAGTCTCTGCCCATATCTATACACTGATCTaGTGGACTGCTGGAAGCAGCATGATCTTTCCAGACCTGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: LSPLLPVSAHIYTLI*WTAGSSMIFPDLSF Trigger: GAATGACAGGTCTGGAAAGATCATGCTGCTTCCAGCAGTCCATCAGATCAGTGTATAGATATGGGCAGAGACTGGAAGGAGAGGACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR GCA 90 bp | AATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTaGTTAGCAAACGGATGCCCTCCATTCCTGTTTTCCCAGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: NQSGSLLHISILSSV*LANGCPPFLFSQRR Trigger: TCTCCTCTGGGAAAACAGGAATGGAGGGCATCCGTTTGCTAAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CCA 90 bp | GGACCATTCCTAGCAGCTTGGCTTCCAAAGAGCAAAACTGAAGGATaGAACAAAGCTGCCTCAGGCTTGCATAAGCTTTCCATAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GPFLAAWLPKSKTEG*NKAASGLHKLSIGA Trigger: AGCACCTATGGAAAGCTTATGCAAGCCTGAGGCAGCTTTGTTCCATCCTTCAGTTTTGCTCTTTGGAAGCCAAGCTGCTAGGAATGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR GCA 90 bp | GGAAACTTTCAACTTTCCAGACCTCAGTCCTCTCCTTCCAGTCTCTaGCCATATCTATACACTGATCTGATGGACTGCTGGAAGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GNFQLSRPQSSPSSL*PYLYTDLMDCWKQH Trigger: ATGCTGCTTCCAGCAGTCCATCAGATCAGTGTATAGATATGGGCAGAGACTGGAAGGAGAGGACTGAGGTCTGGAAAGTTGAAAGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CCA 90 bp | ACTGCTCTGAGCAAGTCTGCACAACAGAAGAGCCATGCTCAGGCTTaGAGAGTTGTACCTCGCACATTAGTTACTCAGAGTCACAATATC | + |
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Preference number: 1 (lower is better) Translates to: TALSKSAQQKSHAQA*RVVPRTLVTQSHNI Trigger: GATATTGTGACTCTGAGTAACTAATGTGCGAGGTACAACTCTCCAAGCCTGAGCATGGCTCTTCTGTTGTGCAGACTTGCTCAGAGCAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CCA 90 bp | GTGATGACTCAAACAGGAAAAAGAGGGACATCTGTCTTTAACTGCTaGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: VMTQTGKRGTSVFNC*GCVQIKGGLRTAQG Trigger: CCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTTTTCCTGTTTGAGTCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR GCA 90 bp | GTTATATCTGGTTTGTATCTCATGTTTTCCCCCTTATCACCCAGCTaGAAACTCCTTAAGTTCTCCAGGAACCCTGCTGCTGGTAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: VISGLYLMFSPLSPS*KLLKFSRNPAAGRY Trigger: GTACCTACCAGCAGCAGGGTTCCTGGAGAACTTAAGGAGTTTGCAGCTGGGTGATAAGGGGGAAAACATGAGATACAAACCAGATATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CCA 90 bp | AGCAAACGGATGCCCTCCATTCCTGTTTTCCCAGAGGAGAATGGCTaGGATGAGCTTTTCCATCAGGTAGGTACTTCTTGTCAAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: SKRMPSIPVFPEENG*DELFHQVGTSCQIC Trigger: ACAAATTTGACAAGAAGTACCTACCTGATGGAAAAGCTCATCCCAGCCATTCTCCTCTGGGAAAACAGGAATGGAGGGCATCCGTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR GCA 90 bp | CTTGTGATGACTCAAACAGGAAAAAGAGGGACATCTGTCTTTAACTaGTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: LVMTQTGKRGTSVFN*WGCVQIKGGLRTAQ Trigger: TTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTTTTCCTGTTTGAGTCATCACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CCA 90 bp | ACAGGAGACAAGAGCTTTATGGGCCACTGGTATCCCAGTTCATCATaGAAATATCAGGGGATGGGAGCTGCATGTTATATCTGGTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: TGDKSFMGHWYPSSS*KYQGMGAACYIWFV Trigger: TACAAACCAGATATAACATGCAGCTCCCATCCCCTGATATTTCCATGATGAACTGGGATACCAGTGGCCCATAAAGCTCTTGTCTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | AAGTTACAGTCATCCAAGAACTTTCAAATCTGTGTTCTCTTGAGCTaGGTTCAGGACAGGAGACAAGAGCTTTATGGGCCACTGGTATCC | + |
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Preference number: 1 (lower is better) Translates to: KLQSSKNFQICVLLS*VQDRRQELYGPLVS Trigger: GGATACCAGTGGCCCATAAAGCTCTTGTCTCCTGTCCTGAACTCAGCTCAAGAGAACACAGATTTGAAAGTTCTTGGATGACTGTAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | ATCCAAAGTTACAGTCATCCAAGAACTTTCAAATCTGTGTTCTCTTaGGCTGAGTTCAGGACAGGAGACAAGAGCTTTATGGGCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: IQSYSHPRTFKSVFS*AEFRTGDKSFMGHW Trigger: CCAGTGGCCCATAAAGCTCTTGTCTCCTGTCCTGAACTCAGCTCAAGAGAACACAGATTTGAAAGTTCTTGGATGACTGTAACTTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | AGGAATAAAGTCATTCCAGAAGGAGTTCCTAGTTTCATTCTCTCTTaGTGGAGAGGCTTTGAATTGATGTGTGTGTCTGGCCATACAAGT | + |
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Preference number: 1 (lower is better) Translates to: RNKVIPEGVPSFILS*WRGFELMCVSGHTS Trigger: ACTTGTATGGCCAGACACACACATCAATTCAAAGCCTCTCCATCAAGAGAGAATGAAACTAGGAACTCCTTCTGGAATGACTTTATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR TCA 90 bp | GCAAACAGAGATTCTGAAGGATCTTCCTGCAATCCTGATACAGCCTaGCCTCATGGAGACTACAAGAGAAAGAATCTTTTTAAATGTCCT | + |
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Preference number: 1 (lower is better) Translates to: ANRDSEGSSCNPDTA*PHGDYKRKNLFKCP Trigger: AGGACATTTAAAAAGATTCTTTCTCTTGTAGTCTCCATGAGGTCAGGCTGTATCAGGATTGCAGGAAGATCCTTCAGAATCTCTGTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CAA 90 bp | TCCTCCCAAGACCCTTGTCCTCGGAGTACGATCAGGACAGGACACTaGTTCTCTCACCCTCAGACACTACCACCTTCACCTCGACTCACA | + |
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Preference number: 2 (lower is better) Translates to: SSQDPCPRSTIRTGH*FSHPQTLPPSPRLT Trigger: TGTGAGTCGAGGTGAAGGTGGTAGTGTCTGAGGGTGAGAGAACAAGTGTCCTGTCCTGATCGTACTCCGAGGACAAGGGTCTTGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CAA 90 bp | CACTGGCTGCATCCCAAGCCTACAGTCAGCACCCTGCCTCTGAGGTaGACTCAACACACTAGCTCTTGGATTCCAGGTATACCCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: HWLHPKPTVSTLPLR*TQHTSSWIPGIPNS Trigger: GCTGTTGGGTATACCTGGAATCCAAGAGCTAGTGTGTTGAGTCAACCTCAGAGGCAGGGTGCTGACTGTAGGCTTGGGATGCAGCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAGATGCCCTAACCTGGCACAAGTaGGACTCTGGGTTCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: LSYSLGCDLRGRPLPQDALTWHK*DSGFYP Trigger: TGGATAGAACCCAGAGTCTCACTTGTGCCAGGTTAG...GGCATCTTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTAAATCAAGGGAGGGTTaGGAACAGCTCAAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VPIKRSTLASPLSWLLEGKSREG*EQLKGR Trigger: CCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTT...ACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAAGCCATGCTCAGGCTTaGAGAGTTGTACCTCGCACA | + |
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Preference number: 2 (lower is better) Translates to: SSLSYSLGCDLRGRPLPQSHAQA*RVVPRT Trigger: TGTGCGAGGTACAACTCTCCAAGCCTGAGCATGGCT...TTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAGGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCAAAATCTGTGTTCTCTTaGGCTGAGTTCAGGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KRSTLASPLSWLLEGASAKSVFS*AEFRTG Trigger: TCCTGTCCTGAACTCAGCTCAAGAGAACACAGATTT...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCACCCATATCTATACACTaGTCTGATGGACTGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: KRSTLASPLSWLLEGASAPISIH*SDGLLE Trigger: TTCCAGCAGTCCATCAGATCAGTGTATAGATATGGG...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTTCCAAAGAGCAAAACTaGAGGATGGAACAAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VPIKRSTLASPLSWLLEGSKEQN*RMEQSC Trigger: GCAGCTTTGTTCCATCCTTCAGTTTTGCTCTTTGGA...ACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCAGCAGGAGAATGGCTGGGATaGGCTTTTCCATCAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SLMAMVDTISQGPYFTSAGEWLG*AFPSGR Trigger: CCTACCTGATGGAAAAGCTCATCCCAGCCATTCTCC...TGCTGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTGCTCCGCCCTTTTTGTaGATTGCTGGCCCCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: TQSVRVPTSHQHPFFCLLAPPFL*IAGPRY Trigger: GTACCTGGGGCCAGCAATGCACAAAAAGGGCGGAGC...AAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCCTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAACAACAGAAGAGCCATaGTCAGGCTTGGAGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSLSYSLGCDLRGRPLPQTTEEP*SGLESC Trigger: ACAACTCTCCAAGCCTGAGCATGGCTCTTCTGTTGT...TTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAGGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAGAGACAAGAGCTTTATaGGCCACTGGTATCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSLSYSLGCDLRGRPLPQETRAL*ATGIPV Trigger: AACTGGGATACCAGTGGCCCATAAAGCTCTTGTCTC...TTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAGGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTTCACTCTGTAAGGCATaGGAAAAACCCAAACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: VPIKRSTLASPLSWLLEGSLCKA*EKPKLS Trigger: GCTTAGTTTGGGTTTTTCTCATGCCTTACAGAGTGA...ACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | ACACAATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTCTACTCACTAGGATGTaGCCTGAGAGGGAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: TQSVRVPTSHQHPFFCLLLLTRM*PEREAT Trigger: AGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAG...AAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCAGCATGCTCTGAGCAAGTCTaGACAACAGAAGAGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: SLMAMVDTISQGPYFTSACSEQV*TTEEPC Trigger: GCATGGCTCTTCTGTTGTGCAGACTTGCTCAGAGCA...TGCTGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCACATCTGTCTTTAACTaGTGGGGCTGTGTTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: PLAVGDKLRRSGRHMLIATSVFN*WGCVQI Trigger: GATTTGAACACAGCCCCAGCAGTTAAAGACAGATGT...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCTATCCCAGTTCATCATaGAAATATCAGGGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: PLAVGDKLRRSGRHMLIAYPSSS*KYQGMG Trigger: TCCCATCCCCTGATATTTCCATGATGAACTGGGATA...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCGCTTCCTCACAACACTaGATAGTAAAAGAGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLAVGDKLRRSGRHMLIAASSQH*IVKELG Trigger: ACCCAACTCTTTTACTATCCAGTGTTGTGAGGAAGC...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CAA 90 bp | CTTCCAAAGAGCAAAACTGAAGGATGGAACAAAGCTGCCTCAGGCTaGCATAAGCTTTCCATAGGTGCTCAGAGGAAGGTGCACTACGCA | + |
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Preference number: 2 (lower is better) Translates to: LPKSKTEGWNKAASG*HKLSIGAQRKVHYA Trigger: TGCGTAGTGCACCTTCCTCTGAGCACCTATGGAAAGCTTATGCAAGCCTGAGGCAGCTTTGTTCCATCCTTCAGTTTTGCTCTTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCAGTTTCATTCTCTCTTaGTGGAGAGGCTTTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: PLAVGDKLRRSGRHMLIASFILS*WRGFEL Trigger: CAATTCAAAGCCTCTCCATCAAGAGAGAATGAAACT...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAAGGGTAGGACAGCACCTTAGTTTCTaGAAATCACTCTGTAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LLGLCSNQGRVENSSRVGQHLSF*KSLCKA Trigger: TGCCTTACAGAGTGATTTCCAGAAACTAAGGTGCTG...TCCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCAAGCAAAACTGAAGGATaGAACAAAGCTGCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASLMAMVDTISQGPYFTSSKTEG*NKAASG Trigger: GCCTGAGGCAGCTTTGTTCCATCCTTCAGTTTTGCT...TGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTTCCTATGATCACCCAGAGCTTCTGTGTGGGAGGATTGTAACTGGAGGATTGATGGAGAGGCTTTaGATTGATGTGTGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LCSYDHPELLCGRIVTGGLMERL*IDVCVW Trigger: CCAGACACACACATCAATTCAAAGCCTCTCCATCAA...TCCTCCAGTTACAATCCTCCCACACAGAAGCTCTGGGTGATCATAGGAACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCAACAGTACCAAGGCTTTaGATATCTCAGATTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: KRSTLASPLSWLLEGASATVPRL*ISQISD Trigger: ATCAGAAATCTGAGATATCCAAAGCCTTGGTACTGT...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR CAA 90 bp | AACTGCTCTGAGCAAGTCTGCACAACAGAAGAGCCATGCTCAGGCTaGGAGAGTTGTACCTCGCACATTAGTTACTCAGAGTCACAATAT | + |
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Preference number: 2 (lower is better) Translates to: NCSEQVCTTEEPCSG*ESCTSHISYSESQY Trigger: ATATTGTGACTCTGAGTAACTAATGTGCGAGGTACAACTCTCCAAGCCTGAGCATGGCTCTTCTGTTGTGCAGACTTGCTCAGAGCAGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | ACACAATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTAATCCTGATACAGCCTaGCCTCATGGAGACTACAAG | + |
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Preference number: 2 (lower is better) Translates to: TQSVRVPTSHQHPFFCLLNPDTA*PHGDYK Trigger: CTTGTAGTCTCCATGAGGTCAGGCTGTATCAGGATT...AAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCATCTCCTTCCAGTCTCTaGCCATATCTATACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: ASLMAMVDTISQGPYFTSSPSSL*PYLYTD Trigger: ATCAGTGTATAGATATGGGCAGAGACTGGAAGGAGA...TGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGACCAGGCAGACTAGCAGCTATTTAGAATGCTTTCTATTGCTGTATAAGGGCCAGTTCACTGGCTaGATCCCAAGCCTACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TETRQTSSYLECFLLLYKGQFTG*IPSLQS Trigger: TGACTGTAGGCTTGGGATGCAGCCAGTGAACTGGCC...CTTATACAGCAATAGAAAGCATTCTAAATAGCTGCTAGTCTGCCTGGTCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTGCATGTTATATCTaGTTTGTATCTCATGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VPIKRSTLASPLSWLLEGAACYI*FVSHVF Trigger: GAAAACATGAGATACAAACCAGATATAACATGCAGC...ACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCAGCAGTAGTCCAAAATTCATaGATAATTCCTTCCTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLMAMVDTISQGPYFTSAVVQNS*IIPSSP Trigger: TGGGGAGGAAGGAATTATTCATGAATTTTGGACTAC...TGCTGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCAGCAAACCAGTTCATATaGAAAAGGGAAACTTTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: ASLMAMVDTISQGPYFTSANQFI*KRETFN Trigger: GTTGAAAGTTTCCCTTTTTCATATGAACTGGTTTGC...TGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACAATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTTACAGCCTGACCTCATaGAGACTACAAGAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQSVRVPTSHQHPFFCLLYSLTS*RLQEKE Trigger: TTCTTTCTCTTGTAGTCTCCATGAGGTCAGGCTGTA...AAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCAATAAAAAGGACCCAATCTTCTCCTTAGAATATCTCCTGGCTTGTTTACTGCTGGAAGCAGCATaGTCTTTCCAGACCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GFNKKDPIFSLEYLLACLLLEAA*SFQTCH Trigger: ATGACAGGTCTGGAAAGATCATGCTGCTTCCAGCAG...TAAACAAGCCAGGAGATATTCTAAGGAGAAGATTGGGTCCTTTTTATTGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGACCAGGCAGACTAGCAGCTATTTAGAATGCTTTCTATTGCTGTATAAGGGAGAGGCTTTGAATTaGTGTGTGTGTCTGGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: TETRQTSSYLECFLLLYKGEALN*CVCLAI Trigger: TATGGCCAGACACACACATCAATTCAAAGCCTCTCC...CTTATACAGCAATAGAAAGCATTCTAAATAGCTGCTAGTCTGCCTGGTCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTCAATAAAAAGGACCCAATCTTCTCCTTAGAATATCTCCTGGCTTGTTTAACTACAGATAGAAACTaGCCCCTGACCCTGAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GFNKKDPIFSLEYLLACLTTDRN*PLTLSY Trigger: GTAGCTCAGGGTCAGGGGCCAGTTTCTATCTGTAGT...TAAACAAGCCAGGAGATATTCTAAGGAGAAGATTGGGTCCTTTTTATTGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCAATAAAAAGGACCCAATCTTCTCCTTAGAATATCTCCTGGCTTGTTTAATCTATACACTGATCTaGTGGACTGCTGGAAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GFNKKDPIFSLEYLLACLIYTLI*WTAGSS Trigger: GCTGCTTCCAGCAGTCCATCAGATCAGTGTATAGAT...TAAACAAGCCAGGAGATATTCTAAGGAGAAGATTGGGTCCTTTTTATTGAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCAATAAAAAGGACCCAATCTTCTCCTTAGAATATCTCCTGGCTTGTTTAGCCCATCTCAGACTTTaGCTAATAGTGTCTTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GFNKKDPIFSLEYLLACLAHLRL*LIVSFR Trigger: TCTAAAAGACACTATTAGTCAAAGTCTGAGATGGGC...TAAACAAGCCAGGAGATATTCTAAGGAGAAGATTGGGTCCTTTTTATTGAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR TCA 72 bp | AGGTGCTCAACACCCACTGTTTGGCCATCTCAGGACTaGACATCCCGGGAGCAGCAAGTCTCATGGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RCSTPTVWPSQD*TSREQQVSWQW Trigger: CCATTGCCATGAGACTTGCTGCTCCCGGGATGTTCAGTCCTGAGATGGCCAAACAGTGGGTGTTGAGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCAACCCTGCCTCTGAGGTaGACTCAACACACTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KRSTLASPLSWLLEGASATLPLR*TQHTSS Trigger: AGAGCTAGTGTGTTGAGTCAACCTCAGAGGCAGGGT...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CCA 72 bp | CCCAGTCTCAACCTTTCACGGGCCTGGAGTACAGCTTaGTGTAGTGCTTGCATAACACATGTGAGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSLNLSRAWSTA*CSACITHVRSW Trigger: CCAGGACCTCACATGTGTTATGCAAGCACTACACCAAGCTGTACTCCAGGCCCGTGAAAGGTTGAGACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR GCA 72 bp | AACTGCTCTGAGCAAGTCTGCACAACAGAAGAGCCATaGTCAGGCTTGGAGAGTTGTACCTCGCACATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: NCSEQVCTTEEP*SGLESCTSHIS Trigger: ACTAATGTGCGAGGTACAACTCTCCAAGCCTGAGCATGGCTCTTCTGTTGTGCAGACTTGCTCAGAGCAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR GCA 72 bp | GGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTaGTTAGCAAACGGATGCCCTCCATTCCTGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSLLHISILSSV*LANGCPPFLFS Trigger: GGAAAACAGGAATGGAGGGCATCCGTTTGCTAAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR TCA 72 bp | GAGAACAGCTCAAGGGTAGGACTAACCTGGCACAAGTaGGACTCTGGGTTCTATCCATGGCACCAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ENSSRVGLTWHK*DSGFYPWHQEK Trigger: TTTTTCTTGGTGCCATGGATAGAACCCAGAGTCTCACTTGTGCCAGGTTAGTCCTACCCTTGAGCTGTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR GCA 72 bp | GGTTTGTATCTCATGTTTTCCCCCTTATCACCCAGCTaGAAACTCCTTAAGTTCTCCAGGAACCCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLYLMFSPLSPS*KLLKFSRNPAA Trigger: AGCAGCAGGGTTCCTGGAGAACTTAAGGAGTTTGCAGCTGGGTGATAAGGGGGAAAACATGAGATACAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR GCA 72 bp | ATCAGCATCCTTTCTTCTGTCTGCTTAGCAAACGGATaGCCTCCATTCCTGTTTTCCCAGAGGAGAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISILSSVCLANG*PPFLFSQRRMA Trigger: AGCCATTCTCCTCTGGGAAAACAGGAATGGAGGGCATCCGTTTGCTAAGCAGACAGAAGAAAGGATGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CCA 72 bp | AGCAAGTCTGCACAACAGAAGAGCCATGCTCAGGCTTaGAGAGTTGTACCTCGCACATTAGTTACTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSAQQKSHAQA*RVVPRTLVTQS Trigger: ACTCTGAGTAACTAATGTGCGAGGTACAACTCTCCAAGCCTGAGCATGGCTCTTCTGTTGTGCAGACTTGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCCTTGGTCAGCTTATTTaGCTAAAATGCAGACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: PLAVGDKLRRSGRHMLIALGQLI*LKCRQH Trigger: ATGTTGTCTGCATTTTAGCAAAATAAGCTGACCAAG...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CCA 72 bp | CTTGAGCTGAGTTCAGGACAGGAGACAAGAGCTTTATaGGCCACTGGTATCCCAGTTCATCATGGAAATATC | + |
|
Preference number: 3 (lower is better) Translates to: LELSSGQETRAL*ATGIPVHHGNI Trigger: GATATTTCCATGATGAACTGGGATACCAGTGGCCCATAAAGCTCTTGTCTCCTGTCCTGAACTCAGCTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR GCA 72 bp | ACTCAAACAGGAAAAAGAGGGACATCTGTCTTTAACTaGTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TQTGKRGTSVFN*WGCVQIKGGLR Trigger: TCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTTTTCCTGTTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR TCA 72 bp | TCATCCAAGAACTTTCAAATCTGTGTTCTCTTGAGCTaGGTTCAGGACAGGAGACAAGAGCTTTATGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSKNFQICVLLS*VQDRRQELYGP Trigger: TGGCCCATAAAGCTCTTGTCTCCTGTCCTGAACTCAGCTCAAGAGAACACAGATTTGAAAGTTCTTGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGGACATCTGTCTTTAACTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTCCTAAGAATCAGATATaGAAGGGACTTAGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: KEGHLSLTAGAVFKSREGPKNQI*KGLRKT Trigger: TGTTTTCCTAAGTCCCTTCAATATCTGATTCTTAGG...ACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CCA 72 bp | TGTAGTCTCGGGTACAATTGTGCTTCCTCACAACACTaGATAGTAAAAGAGTTGGGTCACAGGAATAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSLGYNCASSQH*IVKELGHRNKS Trigger: TGACTTATTCCTGTGACCCAACTCTTTTACTATCCAGTGTTGTGAGGAAGCACAATTGTACCCGAGACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR TCA 72 bp | TACAGTCATCCAAGAACTTTCAAATCTGTGTTCTCTTaGGCTGAGTTCAGGACAGGAGACAAGAGCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: YSHPRTFKSVFS*AEFRTGDKSFM Trigger: CATAAAGCTCTTGTCTCCTGTCCTGAACTCAGCTCAAGAGAACACAGATTTGAAAGTTCTTGGATGACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR TCA 72 bp | AGCTACAGTACCAAGGCTTTGGATATCTCAGATTTCTaGTGTAGTCCAAAATTCATGAATAATTCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SYSTKALDISDF*CSPKFMNNSFL Trigger: GAGGAAGGAATTATTCATGAATTTTGGACTACATCAGAAATCTGAGATATCCAAAGCCTTGGTACTGTAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCAAGGCAGGTCTCGTGCTaGGATGAACCAGTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRSTLASPLSWLLEGASARQVSC*DEPVLV Trigger: GACCAGGACTGGTTCATCCCAGCACGAGACCTGCCT...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAGGTCTCGTGCTGGGATaGACCAGTCCTGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLSYSLGCDLRGRPLPQGLVLG*TSPGPL Trigger: AAGAGGACCAGGACTGGTTCATCCCAGCACGAGACC...TTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAGGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGCAGTAGGGGACAAACTTAGAAGGTCAGGCCGTCACATGCTCATTGCCGGGATGAACCAGTCCTaGTCCTCTTCATCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLAVGDKLRRSGRHMLIAGMNQS*SSSSSI Trigger: GATGCTGGATGAAGAGGACCAGGACTGGTTCATCCC...GGCAATGAGCATGTGACGGCCTGACCTTCTAAGTTTGTCCCCTACTGCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CAA 72 bp | GACCCTTGTCCTCGGAGTACGATCAGGACAGGACACTaGTTCTCTCACCCTCAGACACTACCACCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DPCPRSTIRTGH*FSHPQTLPPSP Trigger: AGGTGAAGGTGGTAGTGTCTGAGGGTGAGAGAACAAGTGTCCTGTCCTGATCGTACTCCGAGGACAAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAGCATTTCACACTGGGTaGTGTACTTGCCACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLSYSLGCDLRGRPLPQAFHTG*CTCHTG Trigger: TCCAGTGTGGCAAGTACATCACCCAGTGTGAAATGC...TTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAGGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | CATGCTCATTGCCATAGTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCCGGTCCAAGAAGTCTTaGTCCTGTAGCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAHCHSPNQEVYSGFPSFRSKKS*SCSSSS Trigger: GGAGGAAGAGCTACAGGAGCAAGACTTCTTGGACCG...GAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGACTATGGCAATGAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CAA 72 bp | CATCCCAAGCCTACAGTCAGCACCCTGCCTCTGAGGTaGACTCAACACACTAGCTCTTGGATTCCAGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HPKPTVSTLPLR*TQHTSSWIPGI Trigger: TATACCTGGAATCCAAGAGCTAGTGTGTTGAGTCAACCTCAGAGGCAGGGTGCTGACTGTAGGCTTGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTCTACTCTGGCTTCCCCTCTTTCCTGGCTCCTTGAGGGTGCTAGTGCAGATAGTCCATTTAACTaGTGTTGTAAGTGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KRSTLASPLSWLLEGASADSPFN*CCKCPT Trigger: TGTGGGGCACTTACAACAGCAGTTAAATGGACTATC...TGCACTAGCACCCTCAAGGAGCCAGGAAAGAGGGGAAGCCAGAGTAGACCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAAGGGTAGGACTTTGCATTTCACACTaGGTGATGTACTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGLCSNQGRVENSSRVGLCISH*VMYLPH Trigger: GTGTGGCAAGTACATCACCCAGTGTGAAATGCAAAG...TCCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGGACATCTGTCTTTAACTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTCATCCAGCATCTCCTaGAAGCAGCGGTCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGHLSLTAGAVFKSREGSSSIS*KQRSKK Trigger: CTTCTTGGACCGCTGCTTCCAGGAGATGCTGGATGA...ACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CAA 72 bp | AGCAAAACTGAAGGATGGAACAAAGCTGCCTCAGGCTaGCATAAGCTTTCCATAGGTGCTCAGAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKTEGWNKAASG*HKLSIGAQRKV Trigger: CACCTTCCTCTGAGCACCTATGGAAAGCTTATGCAAGCCTGAGGCAGCTTTGTTCCATCCTTCAGTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGACCAGGCAGACTAGCAGCTATTTAGAATGCTTTCTATTGCTGTATAAGCTGAGGCAGGTCTCGTaGTGGGATGAACCAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TETRQTSSYLECFLLLYKLRQVS*WDEPVL Trigger: CAGGACTGGTTCATCCCAGCACGAGACCTGCCTCAG...CTTATACAGCAATAGAAAGCATTCTAAATAGCTGCTAGTCTGCCTGGTCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAAGGGTAGGAAAACTCCTTGGCATCTaGATTCAGGTTACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGLCSNQGRVENSSRVGKLLGI*IQVTFA Trigger: AGCAAAAGTAACCTGAATCCAGATGCCAAGGAGTTT...TCCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGTCTCATGGCAATGGTGGACACAATCAGTCAGGGTCCCTACTTCACATCACTGGAACAAACTCCTTaGCATCTGGATTCAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLMAMVDTISQGPYFTSLEQTP*HLDSGY Trigger: GTAACCTGAATCCAGATGCCAAGGAGTTTGTTCCAG...TGATGTGAAGTAGGGACCCTGACTGATTGTGTCCACCATTGCCATGAGACTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | ACACAATCAGTCAGGGTCCCTACTTCACATCAGCATCCTTTCTTCTGTCTGCTTCATTATGGAGATTCTTaGGGAGCCTGTGTTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TQSVRVPTSHQHPFFCLLHYGDS*GACVQR Trigger: ACGCTGAACACAGGCTCCGCAAGAATCTCCATAATG...AAGCAGACAGAAGAAAGGATGCTGATGTGAAGTAGGGACCCTGACTGATTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTTGAGAACAGCTCAAGGGTAGGACATCCACATGTATTCTaGAAATGGGTTTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGLCSNQGRVENSSRVGHPHVF*KWVFLF Trigger: GAAAAGGAAAACCCATTTGCAGAATACATGTGGATG...TCCTACCCTTGAGCTGTTCTCAACCCTCCCTTGATTTGAACACAGCCCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR TCA 90 bp | CATGCTCATTGCCATAGTCCCAATCAAGAGGTCTACTCTGGCTTCCCCTCTTTCATGTCTTCAGATTCATaGCTGTCACCAACTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: HAHCHSPNQEVYSGFPSFMSSDS*LSPTDS Trigger: ACTATCAGTTGGTGACAGTCATGAATCTGAAGACAT...GAAAGAGGGGAAGCCAGAGTAGACCTCTTGATTGGGACTATGGCAATGAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGGACATCTGTCTTTAACTGCTGGGGCTGTGTTCAAATCAAGGGAGGGTATCCTTGGTCTTCTTTaGATTTCACACTGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KEGHLSLTAGAVFKSREGILGLL*ISHWVM Trigger: CATCACCCAGTGTGAAATGCAAAGAAGACCAAGGAT...ACCCTCCCTTGATTTGAACACAGCCCCAGCAGTTAAAGACAGATGTCCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCATATCTATACACTGATCTGATGGACTGCTGGAAGCAGCATGATCTTATGTACTTGCCACACTaGATCCATTCATTATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCPYLYTDLMDCWKQHDLMYLPH*IHSLWR Trigger: TCTCCATAATGAATGGATCCAGTGTGGCAAGTACAT...AAGATCATGCTGCTTCCAGCAGTCCATCAGATCAGTGTATAGATATGGGCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAGACCAGGCAGACTAGCAGCTATTTAGAATGCTTTCTATTGCTGTATAAGTGTCCATTTAATCCTTaGTCTTCTTTGCATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TETRQTSSYLECFLLLYKCPFNP*SSLHFT Trigger: TGTGAAATGCAAAGAAGACCAAGGATTAAATGGACA...CTTATACAGCAATAGAAAGCATTCTAAATAGCTGCTAGTCTGCCTGGTCTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| 3UTR CAA 72 bp | AATTGTGCTTCCTCACAACACTGGATAGTAAAAGAGTaGGGTCACAGGAATAAGTCATTCCATACATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: NCASSQHWIVKE*GHRNKSFHTLL Trigger: TAGTAATGTATGGAATGACTTATTCCTGTGACCCAACTCTTTTACTATCCAGTGTTGTGAGGAAGCACAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS TCA 90 bp | GCTGTTGTAAGTGCCCCACAGCCTGAGGCAGGTCTCGTGCTGGGATaGACCAGTCCTGGTCCTCTTCATCCAGCATCTCCTGGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVVSAPQPEAGLVLG*TSPGPLHPASPGSS Trigger: GCTGCTTCCAGGAGATGCTGGATGAAGAGGACCAGGACTGGTTCATCCCAGCACGAGACCTGCCTCAGGCTGTGGGGCACTTACAACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
||
| CDS CCA 90 bp | CGTGCTGGGATGAACCAGTCCTGGTCCTCTTCATCCAGCATCTCCTaGAAGCAGCGGTCCAAGAAGTCTTGCTCCTGTAGCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGMNQSWSSSSSIS*KQRSKKSCSCSSSS Trigger: GGAGGAAGAGCTACAGGAGCAAGACTTCTTGGACCGCTGCTTCCAGGAGATGCTGGATGAAGAGGACCAGGACTGGTTCATCCCAGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS TCA 90 bp | CCAACTGATAGTCCATTTAACTGCTGTTGTAAGTGCCCCACAGCCTaGGGCAGGTCTCGTGCTGGGATGAACCAGTCCTGGTCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PTDSPFNCCCKCPTA*GRSRAGMNQSWSSS Trigger: TGAAGAGGACCAGGACTGGTTCATCCCAGCACGAGACCTGCCTCAGGCTGTGGGGCACTTACAACAGCAGTTAAATGGACTATCAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS-3UTR CAA 90 bp | CTGAGCTACTCACTAGGATGTGACCTGAGAGGGAGGCCACTTCCACAAGATGCCCACTGGGTGATGTACTaGCCACACTGGATCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: LSYSLGCDLRGRPLPQDAHWVMY*PHWIHS Trigger: TGAATGGATCCAGTGTGGCAAGTACATCACCCAGTG...GGCATCTTGTGGAAGTGGCCTCCCTCTCAGGTCACATCCTAGTGAGTAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS GCA 90 bp | ATGGGTTTTCCTTTTCCTCATGTCCATTTAATCCTTGGTCTTCTTTaGATTTCACACTGGGTGATGTACTTGCCACACTGGATCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: MGFPFPHVHLILGLL*ISHWVMYLPHWIHS Trigger: TGAATGGATCCAGTGTGGCAAGTACATCACCCAGTGTGAAATGCAAAGAAGACCAAGGATTAAATGGACATGAGGAAAAGGAAAACCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS TCA 72 bp | AGTCCATTTAACTGCTGTTGTAAGTGCCCCACAGCCTaGGGCAGGTCTCGTGCTGGGATGAACCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPFNCCCKCPTA*GRSRAGMNQSW Trigger: CCAGGACTGGTTCATCCCAGCACGAGACCTGCCTCAGGCTGTGGGGCACTTACAACAGCAGTTAAATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS CCA 72 bp | ATGAACCAGTCCTGGTCCTCTTCATCCAGCATCTCCTaGAAGCAGCGGTCCAAGAAGTCTTGCTCCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: MNQSWSSSSSIS*KQRSKKSCSCS Trigger: GCTACAGGAGCAAGACTTCTTGGACCGCTGCTTCCAGGAGATGCTGGATGAAGAGGACCAGGACTGGTTCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS CCA 72 bp | TGGGTGATGTACTTGCCACACTGGATCCATTCATTATaGAGATTCTTGCGGAGCCTGTGTTCAGCGTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: WVMYLPHWIHSL*RFLRSLCSASS Trigger: TGACGACGCTGAACACAGGCTCCGCAAGAATCTCCATAATGAATGGATCCAGTGTGGCAAGTACATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS CCA 72 bp | CTTTGCATTTCACACTGGGTGATGTACTTGCCACACTaGATCCATTCATTATGGAGATTCTTGCGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LCISHWVMYLPH*IHSLWRFLRSL Trigger: CAGGCTCCGCAAGAATCTCCATAATGAATGGATCCAGTGTGGCAAGTACATCACCCAGTGTGAAATGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS GCA 72 bp | CCTTTTCCTCATGTCCATTTAATCCTTGGTCTTCTTTaGATTTCACACTGGGTGATGTACTTGCCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: PFPHVHLILGLL*ISHWVMYLPHW Trigger: CCAGTGTGGCAAGTACATCACCCAGTGTGAAATGCAAAGAAGACCAAGGATTAAATGGACATGAGGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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| CDS TCA 72 bp | TTCAGGTTACTTTTGCTCAAAATGTCTTCAGATTCATaGCTGTCACCAACTGATAGTCCATTTAACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FRLLLLKMSSDS*LSPTDSPFNCC Trigger: ACAGCAGTTAAATGGACTATCAGTTGGTGACAGTCATGAATCTGAAGACATTTTGAGCAAAAGTAACCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058383.9 |
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