Pregenerated sensors for PAIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037058Ensembl transcript IDs: ENSMUST00000041314.17, ENSMUST00000235210.2, ENSMUST00000235400.2, ENSMUST00000235476.2, ENSMUST00000236020.2, ENSMUST00000236414.2, ENSMUST00000236666.2, ENSMUST00000236868.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTaGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACA | + |
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Preference number: 1 (lower is better) Translates to: TRAFTMESSNTAFPV*KLCYIHQKRPAAQT Trigger: TGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| 3UTR TCA 90 bp | CCTAACATGATAATACACCAGGCAAAAGCCAGACTAGCTCCTATCTaGCCATCACCTTGTAACCTCAAAGACATTCTTGTGAAATTACTT | + |
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Preference number: 1 (lower is better) Translates to: PNMIIHQAKARLAPI*PSPCNLKDILVKLL Trigger: AAGTAATTTCACAAGAATGTCTTTGAGGTTACAAGGTGATGGTCAGATAGGAGCTAGTCTGGCTTTTGCCTGGTGTATTATCATGTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAGACCCAGTGTGGAAACTGTaGTACATCCACCAAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: VTAPYLVTVSALLLSMQDPVWKL*YIHQKR Trigger: CCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGG...GTCTTGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCACCAGTGTGGAAACTGTaGTACATCCACCAAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: LCDSSLLSNSLSTFIKHAPVWKL*YIHQKR Trigger: CCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGG...TGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAACTTTGGCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGCCAGTGTGGAAACTGTaGTACATCCACCAAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: TKTLAMRKCNTVTRAFTMPVWKL*YIHQKR Trigger: CCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGG...CATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAGACTAACTGCCTTCCCAGTGTaGAAACTGTGCTACATCCAC | + |
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Preference number: 2 (lower is better) Translates to: DSSLLSNSLSTFIKHARLTAFPV*KLCYIH Trigger: GTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGT...TAGTCTTGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGGGTCCTGTGTTAGACTTCACACATGATGGCGATGATGCAATCAATCTTGGAGGTGATTTAATTTaGTTCTTTGTCACAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: GVGPVLDFTHDGDDAINLGGDLI*FFVTVD Trigger: GTCAACTGTGACAAAGAACCAAATTAAATCACCTCC...AAGATTGATTGCATCATCGCCATCATGTGTGAAGTCTAACACAGGACCCACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAGACTAGTAAGTGTAACACAGTaGCGAGAGCTTTTACAATGG | + |
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Preference number: 2 (lower is better) Translates to: DSSLLSNSLSTFIKHARLVSVTQ*RELLQW Trigger: CCATTGTAAAAGCTCTCGTCACTGTGTTACACTTAC...TAGTCTTGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| 3UTR TCA 72 bp | AGCAAGGAAGAGCACCAGAGTCATGCTACCGTCTTTTaGGTGCTTCAGTTGGATTATGGGCTGGTGTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: SKEEHQSHATVF*VLQLDYGLVWV Trigger: GACCCACACCAGCCCATAATCCAACTGAAGCACTCAAAAGACGGTAGCATGACTCTGGTGCTCTTCCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| 3UTR GCA 72 bp | AGGAAGAGCACCAGAGTCATGCTACCGTCTTTTGAGTaGTTCAGTTGGATTATGGGCTGGTGTGGGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: RKSTRVMLPSFE*FSWIMGWCGSC Trigger: ACAGGACCCACACCAGCCCATAATCCAACTGAAGCACTCAAAAGACGGTAGCATGACTCTGGTGCTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| 3UTR CCA 72 bp | TTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTaGAAACTGTGCTACATCCACCAAAAGCGGCCGGCT | + |
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Preference number: 3 (lower is better) Translates to: FTMESSNTAFPV*KLCYIHQKRPA Trigger: AGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| 3UTR CCA 72 bp | ACCAGAGTCATGCTACCGTCTTTTGAGTGCTTCAGTTaGATTATGGGCTGGTGTGGGTCCTGTGTTAGACTT | + |
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Preference number: 3 (lower is better) Translates to: TRVMLPSFECFS*IMGWCGSCVRL Trigger: AAGTCTAACACAGGACCCACACCAGCCCATAATCCAACTGAAGCACTCAAAAGACGGTAGCATGACTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| 3UTR CCA 72 bp | TCATGCTACCGTCTTTTGAGTGCTTCAGTTGGATTATaGGCTGGTGTGGGTCCTGTGTTAGACTTCACACAT | + |
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Preference number: 3 (lower is better) Translates to: SCYRLLSASVGL*AGVGPVLDFTH Trigger: ATGTGTGAAGTCTAACACAGGACCCACACCAGCCCATAATCCAACTGAAGCACTCAAAAGACGGTAGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR CCA 90 bp | TGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGTCATTGATGATGCTTaGGCTAGTACTGCTGCGACT | + |
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Preference number: 4 (lower is better) Translates to: CLPSVETVLHPPKAAGCSVIDDA*ASTAAT Trigger: AGTCGCAGCAGTACTAGCCCAAGCATCATCAATGAC...TGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACAGTCATTGATGATGCTTaGGCTAGTACTGCTGCGACT | + |
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Preference number: 4 (lower is better) Translates to: FPVWKLCYIHQKRPAAQTVIDDA*ASTAAT Trigger: AGTCGCAGCAGTACTAGCCCAAGCATCATCAATGAC...TGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: AFPVWKLCYIHQKRPAAQWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...CTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AFPVWKLCYIHQKRPAAQNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...CTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: TAFPVWKLCYIHQKRPAAWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...AGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGATGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: PSQCGNCATSTKSGRLLRWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...TCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGAAGGAACAAACTCCTTTaGATTGGGATTCAGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSQCGNCATSTKSGRLLRRNKLL*IGIQIA Trigger: AGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCT...TCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR GCA 90 bp | TGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAAGGAACAAACTCCTTTaGATTGGGATTCAGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLPSVETVLHPPKAAGCSRNKLL*IGIQIA Trigger: AGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCT...TGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: FPVWKLCYIHQKRPAAQTWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...TGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SQCGNCATSTKSGRLLRHNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...ATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACAAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FPVWKLCYIHQKRPAAQTNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...TGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| 3UTR CAA 72 bp | AAGCAAGGAAGAGCACCAGAGTCATGCTACCGTCTTTaGAGTGCTTCAGTTGGATTATGGGCTGGTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KQGRAPESCYRL*SASVGLWAGVG Trigger: ACCCACACCAGCCCATAATCCAACTGAAGCACTCAAAAGACGGTAGCATGACTCTGGTGCTCTTCCTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR GCA 90 bp | CTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGAGGAACAAACTCCTTTaGATTGGGATTCAGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTLPSQCGNCATSTKSGRRNKLL*IGIQIA Trigger: AGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCT...CCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | CTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCTCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: LPSQCGNCATSTKSGRLLSSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...GAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | CTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LPSQCGNCATSTKSGRLLSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...GAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGATCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: PSQCGNCATSTKSGRLLRSSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...TCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTTCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: TAFPVWKLCYIHQKRPAASSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...AGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TAFPVWKLCYIHQKRPAASLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...AGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGGTCATTGATGATGCTTaGGCTAGTACTGCTGCGACT | + |
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Preference number: 4 (lower is better) Translates to: TRAFTMESSNTAFPVWKLVIDDA*ASTAAT Trigger: AGTCGCAGCAGTACTAGCCCAAGCATCATCAATGAC...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATTCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: SQCGNCATSTKSGRLLRHSSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...ATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPVWKLCYIHQKRPAAQTSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...TGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGTCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPSSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAGGAACAAACTCCTTTaGATTGGGATTCAGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTRAFTMESSNTAFPVWRNKLL*IGIQIA Trigger: AGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCT...CCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRAFTMESSNTAFPVWKLWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRAFTMESSNTAFPVWKLNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR GCA 90 bp | GGTGTGGGTCCTGTGTTAGACTTCACACATGATGGCGATGATGCAATCAATCTTAGGAACAAACTCCTTTaGATTGGGATTCAGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGPVLDFTHDGDDAINLRNKLL*IGIQIA Trigger: AGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCT...AAGATTGATTGCATCATCGCCATCATGTGTGAAGTCTAACACAGGACCCACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR CCA 90 bp | GATGCAAGCCTCAAACTGTATTTCCTCAAGATTAACACTGGGAGAACTCAGTATGTCATTGATGATGCTTaGGCTAGTACTGCTGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: DASLKLYFLKINTGRTQYVIDDA*ASTAAT Trigger: AGTCGCAGCAGTACTAGCCCAAGCATCATCAATGAC...ATACTGAGTTCTCCCAGTGTTAATCTTGAGGAAATACAGTTTGAGGCTTGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR CCA 90 bp | AAAACTTTGGCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGGTCATTGATGATGCTTaGGCTAGTACTGCTGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KTLAMRKCNTVTRAFTMEVIDDA*ASTAAT Trigger: AGTCGCAGCAGTACTAGCCCAAGCATCATCAATGAC...CTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | AAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCNTVTRAFTMESSNTAFWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...GAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | GCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AMRKCNTVTRAFTMESSNNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...GTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGTCTTCCAGCATTTCTTaGAAACAGCGTTCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRAFTMESSNTAFPVWKLSSSIS*KQRSIN Trigger: ATTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGA...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | GTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAGACAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAPYLVTVSALLLSMQDNWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...GTCTTGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTGGCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGTGGGAGATCTCGAGCTaGAATAAACCATTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTLAMRKCNTVTRAFTMWEISS*NKPFMF Trigger: GAACATGAATGGTTTATTCCAGCTCGAGATCTCCCA...CATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCDSSLLSNSLSTFIKHANWSWI*SIVCGR Trigger: TCTCCCACAAACTATGGACCAAATCCAAGACCAGTT...TGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| 3UTR CAA 72 bp | AGCACTTTTATTAAGCATGCAAGACTAACAAAAACTTaGGCAATGCGTAAGTGTAACACAGTGACGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STFIKHARLTKT*AMRKCNTVTRA Trigger: AGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTTTGTTAGTCTTGCATGCTTAATAAAAGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| CDS-3UTR CCA 90 bp | GATGCAAGCCTCAAACTGTATTTCCTCAAGATTAACACTGGGAGAACTCAGTATTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DASLKLYFLKINTGRTQYSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...ATACTGAGTTCTCCCAGTGTTAATCTTGAGGAAATACAGTTTGAGGCTTGCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAGACTATCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSLLSNSLSTFIKHARLSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...TAGTCTTGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTGGCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKTLAMRKCNTVTRAFTMSLNWS*IWSIVC Trigger: ACAAACTATGGACCAAATCCAAGACCAGTTTAATGA...CATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPSVETVLHPPKAAGCSKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...TGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATGAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVETVLHPPKAAGCSDMKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...CATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSQCGNCATSTKSGRLLQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...GAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | AACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTAFPVWKLCYIHQKRPAKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...AGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQCGNCATSTKSGRLLRHKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...ATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCLPSVETVLHPPKAAGCVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...GCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSQCGNCATSTKSGRLLVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...GAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFPVWKLCYIHQKRPAAQVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...CTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGAATAATCACATCGTCATaGATGATGCTTGGGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSQCGNCATSTKSGRLLRIITSS*MMLGLV Trigger: TACTAGCCCAAGCATCATCAATGACGATGTGATTAT...TCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATGATAATCACATCGTCATaGATGATGCTTGGGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSVETVLHPPKAAGCSDMIITSS*MMLGLV Trigger: TACTAGCCCAAGCATCATCAATGACGATGTGATTAT...CATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVETVLHPPKAAGCSDQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...GTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCACAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLPSVETVLHPPKAAGCSQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...TGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATGCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVETVLHPPKAAGCSDMQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...CATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATGCTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSVETVLHPPKAAGCSDMLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...CATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSVETVLHPPKAAGCSDVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...GTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TLPSQCGNCATSTKSGRLVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...CAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTGCTCAGACATATAATCACATCGTCATaGATGATGCTTGGGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: SQCGNCATSTKSGRLLRHIITSS*MMLGLV Trigger: TACTAGCCCAAGCATCATCAATGACGATGTGATTAT...ATGTCTGAGCAGCCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | CTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGGCTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: LTLPSQCGNCATSTKSGRLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...CCGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TCTAACACTGCCTTCCCAGTGTGGAAACTGTGCTACATCCACCAAAAGCGGCCGCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SNTAFPVWKLCYIHQKRPQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...CGGCCGCTTTTGGTGGATGTAGCACAGTTTCCACACTGGGAAGGCAGTGTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGCTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: TVTRAFTMESSNTAFPVWLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...CCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TVTRAFTMESSNTAFPVWVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...CCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGATAATCACATCGTCATaGATGATGCTTGGGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: TRAFTMESSNTAFPVWKLIITSS*MMLGLV Trigger: TACTAGCCCAAGCATCATCAATGACGATGTGATTAT...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TRAFTMESSNTAFPVWKLQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGTGGAAACTGCTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: TRAFTMESSNTAFPVWKLLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...CAGTTTCCACACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | AACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCAGTGGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: NTVTRAFTMESSNTAFPVVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...CACTGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS CCA 90 bp | GAAGAGCCATCACTGATAACAAGGTCATTAAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGATCTCGAGCTGGAATAAACCATTCA | + |
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Preference number: 5 (lower is better) Translates to: EEPSLITRSLNWSWI*SIVCGRSRAGINHS Trigger: TGAATGGTTTATTCCAGCTCGAGATCTCCCACAAACTATGGACCAAATCCAAGACCAGTTTAATGACCTTGTTATCAGTGATGGCTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCCACTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: CNTVTRAFTMESSNTAFPLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...TGGGAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | ATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: MRKCNTVTRAFTMESSNTKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...AGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCCTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: KCNTVTRAFTMESSNTAFLFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...GAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TTGTGTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCAAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCDSSLLSNSLSTFIKHAKLVLD*VHSLWE Trigger: CTCCCACAAACTATGGACCAAATCCAAGACCAGTTT...TGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGTCTTCTAACACTGCCTTCGTCATTAAACTGGTCTaGGATTTGGTCCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCNTVTRAFTMESSNTAFVIKLV*DLVHSL Trigger: CAAACTATGGACCAAATCCAAGACCAGTTTAATGAC...GAAGGCAGTGTTAGAAGACTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | GATGCAAGCCTCAAACTGTATTTCCTCAAGATTAACACTGGGAGAACTCAGTATATAATCACATCGTCATaGATGATGCTTGGGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: DASLKLYFLKINTGRTQYIITSS*MMLGLV Trigger: TACTAGCCCAAGCATCATCAATGACGATGTGATTAT...ATACTGAGTTCTCCCAGTGTTAATCTTGAGGAAATACAGTTTGAGGCTTGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 |
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| CDS-3UTR CAA 90 bp | AAAACTTTGGCAATGCGTAAGTGTAACACAGTGACGAGAGCTTTTACAATGGAGCAACTCCTCTTCTATTaGTCTGTTGAATTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KTLAMRKCNTVTRAFTMEQLLFY*SVEFLF Trigger: GAAGAGGAATTCAACAGACAAATAGAAGAGGAGTTG...CTCCATTGTAAAAGCTCTCGTCACTGTGTTACACTTACGCATTGCCAAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236868.2 |
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| CDS-3UTR CAA 90 bp | TTGTGTGACAGCTCCTTACTTAGTAACAGTCTCAGCACTTTTATTAAGCATGCACTCTTCCAGCATTTCTaGGAAACAGCGTTCAATAAA | + |
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Preference number: 5 (lower is better) Translates to: LCDSSLLSNSLSTFIKHALFQHF*ETAFNK Trigger: TTTATTGAACGCTGTTTCCAAGAAATGCTGGAAGAG...TGCATGCTTAATAAAAGTGCTGAGACTGTTACTAAGTAAGGAGCTGTCACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041314.17 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 |
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| CDS CAA 72 bp | ACCCCAGGAACAAACTCCTTTGCATTGGGATTCAGATaGCTCTTGACCACAAGATCTTCCAGAGAAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TPGTNSFALGFR*LLTTRSSREEP Trigger: TGGCTCTTCTCTGGAAGATCTTGTGGTCAAGAGCAATCTGAATCCCAATGCAAAGGAGTTTGTTCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS CCA 72 bp | GAGCCATCACTGATAACAAGGTCATTAAACTGGTCTTaGATTTGGTCCATAGTTTGTGGGAGATCTCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: EPSLITRSLNWS*IWSIVCGRSRA Trigger: AGCTCGAGATCTCCCACAAACTATGGACCAAATCCAAGACCAGTTTAATGACCTTGTTATCAGTGATGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS CAA 90 bp | AGAAGAGCCATCACTGATAACAAGGTCATTAAACTGGTCTTGGATTaGGTCCATAGTTTGTGGGAGATCTCGAGCTGGAATAAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: RRAITDNKVIKLVLD*VHSLWEISSWNKPF Trigger: GAATGGTTTATTCCAGCTCGAGATCTCCCACAAACTATGGACCAAATCCAAGACCAGTTTAATGACCTTGTTATCAGTGATGGCTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS CCA 72 bp | TCACTGATAACAAGGTCATTAAACTGGTCTTGGATTTaGTCCATAGTTTGTGGGAGATCTCGAGCTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: SLITRSLNWSWI*SIVCGRSRAGI Trigger: TATTCCAGCTCGAGATCTCCCACAAACTATGGACCAAATCCAAGACCAGTTTAATGACCTTGTTATCAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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| CDS CAA 72 bp | AAGGTCATTAAACTGGTCTTGGATTTGGTCCATAGTTaGTGGGAGATCTCGAGCTGGAATAAACCATTCATG | + |
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Preference number: 6 (lower is better) Translates to: KVIKLVLDLVHS*WEISSWNKPFM Trigger: CATGAATGGTTTATTCCAGCTCGAGATCTCCCACAAACTATGGACCAAATCCAAGACCAGTTTAATGACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000041314.17 ENSMUST00000235210.2 ENSMUST00000235400.2 ENSMUST00000235476.2 ENSMUST00000236020.2 ENSMUST00000236414.2 ENSMUST00000236666.2 ENSMUST00000236868.2 |
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