Pregenerated sensors for PAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020051Ensembl transcript IDs: ENSMUST00000020241.17, ENSMUST00000217864.2, ENSMUST00000218573.2, ENSMUST00000219813.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCAGGCCTTCAGAGTCCTaGACACCGTTCCCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPRPSES*TPFPRS Trigger: AGACCTGGGGAACGGTGTTCAGGACTCTGAAGGCCT...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGCAATGTCAGCAAACTaGTTTCGTCTCGCCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPAMSAN*FRLARY Trigger: GTACCGGGCGAGACGAAAGCAGTTTGCTGACATTGC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTATAAGCGCAGGACCTTaGCCAGGGCACCAACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGISAGP*PGHQLP Trigger: AGGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTAT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAATCTGTCCAGCTCCTaGATGGTCCTTGGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGNLSSS*MVLGNQ Trigger: CTGGTTCCCAAGGACCATTCAGGAGCTGGACAGATT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTTTCCTGCCCAAAGTCTaGGAGTTTTCTGCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGFLPKV*EFSAQD Trigger: GTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAA...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGGCAAAGCTTCTATCTaGAAACAAGGGCACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPGKASI*KQGHMS Trigger: GGACATGTGCCCTTGTTTTCAGATAGAAGCTTTGCC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR TCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGCAAGCCCAATTTCCTaGGAAAACTGGGCAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPASPIS*ENWAKL Trigger: AAGCTTTGCCCAGTTTTCTCAGGAAATTGGGCTTGC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCAGTCTGAGAGTTTTCTaGTCAGGACTCCGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPSLRVF*SGLRSP Trigger: TGGAGAACGGAGTCCTGAGCAGAAAACTCTCAGACT...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCTCCTGAATGGTCCTTaGGAACCAGGGCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSLLNGP*EPGHCV Trigger: AACACAGTGCCCTGGTTCCCAAGGACCATTCAGGAG...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCTTCCTGCCCAAAGTCTaGGAGTTTTCTGCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSFLPKV*EFSAQD Trigger: GTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAA...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCGTTCGGCTCCATAGCTaGGAATCTGATTGGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSVRLHS*ESDWRI Trigger: GATTCGCCAATCAGATTCTCAGCTATGGAGCCGAAC...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAGTCTGAGAGTTTTCTaGTCAGGACTCCGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGSLRVF*SGLRSP Trigger: TGGAGAACGGAGTCCTGAGCAGAAAACTCTCAGACT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR GCA 90 bp | TGTACTGAATGGAATAATTTGTTCCCGATGACAGTCTCACATTTTACACTAAGCAAAGCCTGGGTGGTCTaGATCCAGTTCGGCTCCATA | + |
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Preference number: 4 (lower is better) Translates to: CTEWNNLFPMTVSHFTLSKAWVV*IQFGSI Trigger: TATGGAGCCGAACTGGATGCAGACCACCCAGGCTTT...GCTTAGTGTAAAATGTGAGACTGTCATCGGGAACAAATTATTCCATTCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCGAAACATCTTCCAGCTaGGGGATGTTGTCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSETSSS*GMLSSR Trigger: CCGTGAAGACAACATCCCGCAGCTGGAAGATGTTTC...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAAAGCTCATGGACAGTaGCACCAATGTCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGKAHGQ*HQCRSS Trigger: TGAGGAACGACATTGGTGCCACTGTCCATGAGCTTT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CCA 90 bp | TGTACTGAATGGAATAATTTGTTCCCGATGACAGTCTCACATTTTACACTAAGCTCTCGGGAAAGCTCATaGACAGTGGCACCAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CTEWNNLFPMTVSHFTLSSRESS*TVAPMS Trigger: CGACATTGGTGCCACTGTCCATGAGCTTTCCCGAGA...GCTTAGTGTAAAATGTGAGACTGTCATCGGGAACAAATTATTCCATTCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCTCTTTAAAGCCTGGGTaGTCTGCATCCAGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSSLKPG*SASSSA Trigger: AGCCGAACTGGATGCAGACCACCCAGGCTTTAAAGA...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR TCA 90 bp | TGTACTGAATGGAATAATTTGTTCCCGATGACAGTCTCACATTTTACACTAAGCTTCCTGCCCAAAGTCTaGGAGTTTTCTGCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTEWNNLFPMTVSHFTLSFLPKV*EFSAQD Trigger: GTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAA...GCTTAGTGTAAAATGTGAGACTGTCATCGGGAACAAATTATTCCATTCAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCTCTCCTTGGCATCATTaGAACTCTCGGCCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSSPWHH*NSRPHS Trigger: ACTATGTGGCCGAGAGTTTCAATGATGCCAAGGAGA...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTATGGGCTTAGATCCATaGCTAATGTACTGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGMGLDP*LMYCVQ Trigger: CTGCACACAGTACATTAGGCATGGATCTAAGCCCAT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTGAGCCCAGCACCATATaGCTTTATAGAATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGEPSTI*LYRISF Trigger: GAAGGAGATTCTATAAAGGCATATGGTGCTGGGCTC...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTATTTTCTGCAGGGCATaGCAAAGGATTCCAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGIFCRA*QRIPTS Trigger: TGAGGTTGGAATCCTTTGCCATGCCCTGCAGAAAAT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGATATTGTCCAGGACCTTaGCCAGGGCACCAACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TKQYVFHQSLPERLKMNRYCPGP*PGHQLP Trigger: AGGAAGTTGGTGCCCTGGCCAAGGTCCTGGACAATA...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTGATACAGCACCATTTTaGTTGGAGTTGTCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGDTAPF*LELSSM Trigger: CATCGAAGACAACTCCAATCAAAATGGTGCTGTATC...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCATTTTCTGCAGGGCATaGCAAAGGATTCCAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSIFCRA*QRIPTS Trigger: TGAGGTTGGAATCCTTTGCCATGCCCTGCAGAAAAT...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCGATACAGCACCATTTTaGTTGGAGTTGTCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSDTAPF*LELSSM Trigger: CATCGAAGACAACTCCAATCAAAATGGTGCTGTATC...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAACTTCCTCTTTGAGTaGGAATATCAGAGATACAGC | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGNFLFE*EYQRYS Trigger: GCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTCACCAACTTCCTCTTTaGGTGAGAATATCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGHQLPL*VRISEI Trigger: TATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTG...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTCAATGTGTGTCAGGTTaGTCTCATTCTCCTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGQCVSG*SHSPQI Trigger: TATTTGAGGAGAATGAGATCAACCTGACACACATTG...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR TCA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGCTTATCCAGATAGGTaGAAAACTCATACTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: SLPERLKMNRQSPNDMSPAYPDR*KTHTHL Trigger: AAGATGAGTATGAGTTTTTCACCTATCTGGATAAGC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR GCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTCATGACTTTATTTTCTaGAGGGCATGGCAAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGHDFIF*RAWQRI Trigger: AATCCTTTGCCATGCCCTGCAGAAAATAAAGTCATG...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTCAGCACCATTTTGATTaGAGTTGTCTTCGATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGQHHFD*SCLRCN Trigger: GTTACATCGAAGACAACTCCAATCAAAATGGTGCTG...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCAACTTCCTCTTTGAGTaGGAATATCAGAGATACAGC | + |
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Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSNFLFE*EYQRYS Trigger: GCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTT...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCACCAACTTCCTCTTTaGGTGAGAATATCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSHQLPL*VRISEI Trigger: TATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTG...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTGCTTATCCAGATAGGTaGAAAACTCATACTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: RSEISKSNVTLKDLPLMGAYPDR*KTHTHL Trigger: AAGATGAGTATGAGTTTTTCACCTATCTGGATAAGC...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR CCA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCAGCACCATTTTGATTaGAGTTGTCTTCGATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: QYVFHQSLPERLKMNRQSQHHFD*SCLRCN Trigger: GTTACATCGAAGACAACTCCAATCAAAATGGTGCTG...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGAATTTTCTGCAGGGCATaGCAAAGGATTCCAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: TKQYVFHQSLPERLKMNRIFCRA*QRIPTS Trigger: TGAGGTTGGAATCCTTTGCCATGCCCTGCAGAAAAT...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | TGTACTGAATGGAATAATTTGTTCCCGATGACAGTCTCACATTTTACACTAAGCAACTTCCTCTTTGAGTaGGAATATCAGAGATACAGC | + |
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Preference number: 4 (lower is better) Translates to: CTEWNNLFPMTVSHFTLSNFLFE*EYQRYS Trigger: GCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTT...GCTTAGTGTAAAATGTGAGACTGTCATCGGGAACAAATTATTCCATTCAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR TCA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACACCAACTTCCTCTTTaGGTGAGAATATCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: TKQYVFHQSLPERLKMNRHQLPL*VRISEI Trigger: TATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTG...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR CCA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGCACCATTTTGATTaGAGTTGTCTTCGATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: TKQYVFHQSLPERLKMNRQHHFD*SCLRCN Trigger: GTTACATCGAAGACAACTCCAATCAAAATGGTGCTG...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS CCA 90 bp | GGGAACCAGGGCACTGTGTTCTTTTCCTTGTCTCGGGAAAGCTCATaGACAGTGGCACCAATGTCGTTCCTCAGGCTCTTGATGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: GNQGTVFFSLSRESS*TVAPMSFLRLLMML Trigger: CAGCATCATCAAGAGCCTGAGGAACGACATTGGTGCCACTGTCCATGAGCTTTCCCGAGACAAGGAAAAGAACACAGTGCCCTGGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS CCA 90 bp | GCTGAGAATCTGATTGGCGAATCTGTCCAGCTCCTGAATGGTCCTTaGGAACCAGGGCACTGTGTTCTTTTCCTTGTCTCGGGAAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: AENLIGESVQLLNGP*EPGHCVLFLVSGKL Trigger: GAGCTTTCCCGAGACAAGGAAAAGAACACAGTGCCCTGGTTCCCAAGGACCATTCAGGAGCTGGACAGATTCGCCAATCAGATTCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCAATAAGCGCAGGACCTaGGCCAGGGCACCAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLPERLKMNRQSPNDMSPNKRRT*ARAPTS Trigger: GGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTATT...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGCTCCTGAATGGTCCTaGGGAACCAGGGCACTGTGT | + |
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Preference number: 5 (lower is better) Translates to: SLPERLKMNRQSPNDMSPAPEWS*GTRALC Trigger: ACACAGTGCCCTGGTTCCCAAGGACCATTCAGGAGC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCGTATTGTCCAGGACCTaGGCCAGGGCACCAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLPERLKMNRQSPNDMSPVLSRT*ARAPTS Trigger: GGAAGTTGGTGCCCTGGCCAAGGTCCTGGACAATAC...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219813.2 |
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| CDS TCA 90 bp | CATCTTTGTTTAAACGGGAAGGTCTGGATTCAATGTGTGTCAGGTTaGTCTCATTCTCCTCAAATAAGCGCAGGACCTTGGCCAGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HLCLNGKVWIQCVSG*SHSPQISAGPWPGH Trigger: GTGCCCTGGCCAAGGTCCTGCGCTTATTTGAGGAGAATGAGATCAACCTGACACACATTGAATCCAGACCTTCCCGTTTAAACAAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAATAAGCGCAGGACCTaGGCCAGGGCACCAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: RSEISKSNVTLKDLPLMGNKRRT*ARAPTS Trigger: GGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTATT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS TCA 90 bp | CCTCAAATAAGCGCAGGACCTTGGCCAGGGCACCAACTTCCTCTTTaGGTGAGAATATCAGAGATACAGCACCATTTTGATTGGAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: PQISAGPWPGHQLPL*VRISEIQHHFDWSC Trigger: ACAACTCCAATCAAAATGGTGCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTATTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS TCA 90 bp | GCTGAGTATTGTCCAGGACCTTGGCCAGGGCACCAACTTCCTCTTTaGGTGAGAATATCAGAGATACAGCACCATTTTGATTGGAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: AEYCPGPWPGHQLPL*VRISEIQHHFDWSC Trigger: ACAACTCCAATCAAAATGGTGCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTGCCCTGGCCAAGGTCCTGGACAATACTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219813.2 |
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| CDS-3UTR CAA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCTCGTTCCTCAGGCTCTaGATGATGCTGCCCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: QYVFHQSLPERLKMNRQSSFLRL*MMLPRT Trigger: CGTCCTGGGCAGCATCATCAAGAGCCTGAGGAACGA...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS TCA 90 bp | GCTGAGTATTGTCCAGGACGGGCTTGCTACGCTTATCCAGATAGGTaGAAAACTCATACTCATCTTTGTTTAAACGGGAAGGTCTGGATT | + |
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Preference number: 5 (lower is better) Translates to: AEYCPGRACYAYPDR*KTHTHLCLNGKVWI Trigger: AATCCAGACCTTCCCGTTTAAACAAAGATGAGTATGAGTTTTTCACCTATCTGGATAAGCGTAGCAAGCCCGTCCTGGACAATACTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218573.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTTGTCTTCGATGTAACTaGTTTCCTGCCCAAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSEISKSNVTLKDLPLMGCLRCN*FPAQSL Trigger: CAGACTTTGGGCAGGAAACAAGTTACATCGAAGACA...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR CAA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCAGATACAGCACCATTTaGATTGGAGTTGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: SLPERLKMNRQSPNDMSPRYSTI*IGVVFD Trigger: ATCGAAGACAACTCCAATCAAAATGGTGCTGTATCT...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR CAA 90 bp | AGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCCCAAATGATATGAGTCCCTCAATGTGTGTCAGGTaGATCTCATTCTCCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SLPERLKMNRQSPNDMSPSMCVR*ISFSSN Trigger: ATTTGAGGAGAATGAGATCAACCTGACACACATTGA...GGGACTCATATCATTTGGGCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAGATACAGCACCATTTaGATTGGAGTTGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: RSEISKSNVTLKDLPLMGRYSTI*IGVVFD Trigger: ATCGAAGACAACTCCAATCAAAATGGTGCTGTATCT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTTCAATGTGTGTCAGGTaGATCTCATTCTCCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: RSEISKSNVTLKDLPLMGSMCVR*ISFSSN Trigger: ATTTGAGGAGAATGAGATCAACCTGACACACATTGA...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGAGATATCTAAATCAAATGTGACTCTGAAGGATCTACCACTGATGGGTAACTCATACTCATCTTaGTTTAAACGGGAAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSEISKSNVTLKDLPLMGNSYSS*FKREGL Trigger: CAGACCTTCCCGTTTAAACAAAGATGAGTATGAGTT...ACCCATCAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS-3UTR CAA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGAGGCAGGAGCTTTGGCTaGTCTGATAAACAGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: TKQYVFHQSLPERLKMNRGRSFG*SDKQYC Trigger: ACAGTACTGTTTATCAGACAAGCCAAAGCTCCTGCC...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGAGTCCTCACTTTCTCCTaGGCATCATTGAAACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: TKQYVFHQSLPERLKMNRVLTFS*ASLKLS Trigger: CGAGAGTTTCAATGATGCCAAGGAGAAAGTGAGGAC...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | ACTAAGCAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGATGTCTTCGATGTAACTaGTTTCCTGCCCAAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: TKQYVFHQSLPERLKMNRCLRCN*FPAQSL Trigger: CAGACTTTGGGCAGGAAACAAGTTACATCGAAGACA...TCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTGCTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS-3UTR CAA 90 bp | CAATATGTATTCCATCAGAGCTTACCTGAGAGGTTAAAAATGAACAGACAGAGCAACTCATACTCATCTTaGTTTAAACGGGAAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: QYVFHQSLPERLKMNRQSNSYSS*FKREGL Trigger: CAGACCTTCCCGTTTAAACAAAGATGAGTATGAGTT...GCTCTGTCTGTTCATTTTTAACCTCTCAGGTAAGCTCTGATGGAATACATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS-3UTR CAA 90 bp | TGTACTGAATGGAATAATTTGTTCCCGATGACAGTCTCACATTTTACACTAAGCAGATACAGCACCATTTaGATTGGAGTTGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: CTEWNNLFPMTVSHFTLSRYSTI*IGVVFD Trigger: ATCGAAGACAACTCCAATCAAAATGGTGCTGTATCT...GCTTAGTGTAAAATGTGAGACTGTCATCGGGAACAAATTATTCCATTCAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS CCA 72 bp | TCTTCCTCTCCTCCTCTGTGTATTCCACCCGAGGAATaGGCTGCCCATGGCGGTAGTTGTAGGCAATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSPPLCIPPEE*AAHGGSCRQCQ Trigger: CTGACATTGCCTACAACTACCGCCATGGGCAGCCCATTCCTCGGGTGGAATACACAGAGGAGGAGAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000217864.2 |
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| CDS TCA 72 bp | AGCCTGGGTGGTCTGCATCCAGTTCGGCTCCATAGCTaGGAATCTGATTGGCGAATCTGTCCAGCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SLGGLHPVRLHS*ESDWRICPAPE Trigger: TTCAGGAGCTGGACAGATTCGCCAATCAGATTCTCAGCTATGGAGCCGAACTGGATGCAGACCACCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000217864.2 |
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| CDS CAA 72 bp | CTTCAACTGCTGAGTATTGTCCAGGACCTCAACCCTTaGAGTGTAGGGGTCATAGCGAACGGAGAAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LQLLSIVQDLNP*SVGVIANGEGP Trigger: CGGCCCTTCTCCGTTCGCTATGACCCCTACACTCAAAGGGTTGAGGTCCTGGACAATACTCAGCAGTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS GCA 72 bp | CGCCCGGTACACAGGATCTTTAAAGCCTGGGTGGTCTaGATCCAGTTCGGCTCCATAGCTGAGAATCTGATT | + |
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Preference number: 6 (lower is better) Translates to: RPVHRIFKAWVV*IQFGSIAENLI Trigger: AATCAGATTCTCAGCTATGGAGCCGAACTGGATGCAGACCACCCAGGCTTTAAAGATCCTGTGTACCGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000217864.2 |
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| CDS CCA 72 bp | GGCACTGTGTTCTTTTCCTTGTCTCGGGAAAGCTCATaGACAGTGGCACCAATGTCGTTCCTCAGGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GTVFFSLSRESS*TVAPMSFLRLL Trigger: CAAGAGCCTGAGGAACGACATTGGTGCCACTGTCCATGAGCTTTCCCGAGACAAGGAAAAGAACACAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS TCA 72 bp | AACTCTCGGCCACATAGTACAGAGGCTGGAACTCTGTaGCAGTATACTCCTGGCAGGCTGTCTTCTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: NSRPHSTEAGTL*QYTPGRLSSLA Trigger: AGCTAGAGAAGACAGCCTGCCAGGAGTATACTGTCACAGAGTTCCAGCCTCTGTACTATGTGGCCGAGAGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS GCA 72 bp | TGTAACTTGTTTCCTGCCCAAAGTCTGAGAGTTTTCTaGTCAGGACTCCGTTCTCCAGGACAACAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: CNLFPAQSLRVF*SGLRSPGQQLP Trigger: TGGCAGCTGTTGTCCTGGAGAACGGAGTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAAACAAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000219813.2 |
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| CDS TCA 72 bp | GTTGTCTTCGATGTAACTTGTTTCCTGCCCAAAGTCTaGGAGTTTTCTGCTCAGGACTCCGTTCTCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VVFDVTCFLPKV*EFSAQDSVLQD Trigger: GTCCTGGAGAACGGAGTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAAACAAGTTACATCGAAGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS TCA 72 bp | AGCGCAGGACCTTGGCCAGGGCACCAACTTCCTCTTTaGGTGAGAATATCAGAGATACAGCACCATTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SAGPWPGHQLPL*VRISEIQHHFD Trigger: ATCAAAATGGTGCTGTATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS CAA 72 bp | AGGTTGATCTCATTCTCCTCAAATAAGCGCAGGACCTaGGCCAGGGCACCAACTTCCTCTTTGAGTGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RLISFSSNKRRT*ARAPTSSLSEN Trigger: ATTCTCACTCAAAGAGGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTATTTGAGGAGAATGAGATCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS CAA 90 bp | ATGTGTGTCAGGTTGATCTCATTCTCCTCAAATAAGCGCAGGACCTaGGCCAGGGCACCAACTTCCTCTTTGAGTGAGAATATCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MCVRLISFSSNKRRT*ARAPTSSLSENIRD Trigger: ATCTCTGATATTCTCACTCAAAGAGGAAGTTGGTGCCCTGGCCAAGGTCCTGCGCTTATTTGAGGAGAATGAGATCAACCTGACACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS CAA 90 bp | TCATCTTTGTTTAAACGGGAAGGTCTGGATTCAATGTGTGTCAGGTaGATCTCATTCTCCTCAAATAAGCGCAGGACCTTGGCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLFKREGLDSMCVR*ISFSSNKRRTLARA Trigger: TGCCCTGGCCAAGGTCCTGCGCTTATTTGAGGAGAATGAGATCAACCTGACACACATTGAATCCAGACCTTCCCGTTTAAACAAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS GCA 72 bp | ATATCAGGTTCAGGTGTGTACATGGGCTTAGATCCATaGCTAATGTACTGTGTGCAGTGGAAGACTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ISGSGVYMGLDP*LMYCVQWKTRK Trigger: CTTCCGAGTCTTCCACTGCACACAGTACATTAGGCATGGATCTAAGCCCATGTACACACCTGAACCTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS TCA 72 bp | TGCCCAGGACGGGCTTGCTACGCTTATCCAGATAGGTaGAAAACTCATACTCATCTTTGTTTAAACGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPGRACYAYPDR*KTHTHLCLNGK Trigger: CTTCCCGTTTAAACAAAGATGAGTATGAGTTTTTCACCTATCTGGATAAGCGTAGCAAGCCCGTCCTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS CAA 90 bp | TCAGAGATACAGCACCATTTTGATTGGAGTTGTCTTCGATGTAACTaGTTTCCTGCCCAAAGTCTGAGAGTTTTCTGCTCAGGACTCCGT | + |
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Preference number: 6 (lower is better) Translates to: SEIQHHFDWSCLRCN*FPAQSLRVFCSGLR Trigger: ACGGAGTCCTGAGCAGAAAACTCTCAGACTTTGGGCAGGAAACAAGTTACATCGAAGACAACTCCAATCAAAATGGTGCTGTATCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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| CDS TCA 72 bp | CTATCTGAAAACAAGGGCACATGTCCCAAGAGTTCATaGCAGATATCAGGTTCAGGTGTGTACATGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: LSENKGTCPKSS*QISGSGVYMGL Trigger: TAAGCCCATGTACACACCTGAACCTGATATCTGTCATGAACTCTTGGGACATGTGCCCTTGTTTTCAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020241.17 |
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| CDS TCA 72 bp | TGTCCAGGACGGGCTTGCTACGCTTATCCAGATAGGTaGAAAACTCATACTCATCTTTGTTTAAACGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPGRACYAYPDR*KTHTHLCLNGK Trigger: CTTCCCGTTTAAACAAAGATGAGTATGAGTTTTTCACCTATCTGGATAAGCGTAGCAAGCCCGTCCTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218573.2 |
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| CDS TCA 72 bp | TCACTATTAATGGAGTCAGCTAAAATCTTCAACTGCTaGGTATTGTCCAGGACGGGCTTGCTACGCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SLLMESAKIFNC*VLSRTGLLRLS Trigger: GGATAAGCGTAGCAAGCCCGTCCTGGACAATACTCAGCAGTTGAAGATTTTAGCTGACTCCATTAATAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218573.2 |
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| CDS CAA 72 bp | TTTAAACGGGAAGGTCTGGATTCAATGTGTGTCAGGTaGATCTCATTCTCCTCAAATAAGCGCAGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: FKREGLDSMCVR*ISFSSNKRRTL Trigger: CAAGGTCCTGCGCTTATTTGAGGAGAATGAGATCAACCTGACACACATTGAATCCAGACCTTCCCGTTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 |
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| CDS CAA 72 bp | CAGCACCATTTTGATTGGAGTTGTCTTCGATGTAACTaGTTTCCTGCCCAAAGTCTGAGAGTTTTCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QHHFDWSCLRCN*FPAQSLRVFCS Trigger: TGAGCAGAAAACTCTCAGACTTTGGGCAGGAAACAAGTTACATCGAAGACAACTCCAATCAAAATGGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020241.17 ENSMUST00000218573.2 ENSMUST00000219813.2 |
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