Pregenerated sensors for PAFAH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037366Ensembl transcript IDs: ENSMUST00000105869.9, ENSMUST00000105870.8, ENSMUST00000132658.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGCCAAGTCAAGTTGTCATATCCAGGCTCCATGGGGCTCTGCCTaGGGCCGAAAAGACCGGCTACGAGGTTATGATGGCACAGACGGA | + |
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Preference number: 1 (lower is better) Translates to: LAKSSCHIQAPWGSA*GRKDRLRGYDGTDG Trigger: TCCGTCTGTGCCATCATAACCTCGTAGCCGGTCTTTTCGGCCCCAGGCAGAGCCCCATGGAGCCTGGATATGACAACTTGACTTGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR CCA 90 bp | TGCAGAGCCATACCTGAGGGGCCTCCTGATGTGTGCACACCTCTCTaGATCAATTCAGTGGCCCTGACCTTGGAATACTGTGCGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CRAIPEGPPDVCTPL*INSVALTLEYCAEK Trigger: TTTCTCCGCACAGTATTCCAAGGTCAGGGCCACTGAATTGATCCAGAGAGGTGTGCACACATCAGGAGGCCCCTCAGGTATGGCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR TCA 90 bp | AATTCAGTGGCCCTGACCTTGGAATACTGTGCGGAGAAACACTTTTaGTCTGTACTTGCTCCTCTGAGGTTCTTCCCTCCTTGGATTCAG | + |
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Preference number: 1 (lower is better) Translates to: NSVALTLEYCAEKHF*SVLAPLRFFPPWIQ Trigger: CTGAATCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCCAAGGTCAGGGCCACTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR GCA 90 bp | CACACCTCTCTGGATCAATTCAGTGGCCCTGACCTTGGAATACTGTaGGGAGAAACACTTTTGATCTGTACTTGCTCCTCTGAGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: HTSLDQFSGPDLGIL*GETLLICTCSSEVL Trigger: AAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCCAAGGTCAGGGCCACTGAATTGATCCAGAGAGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR TCA 90 bp | TCAACAACCCCAAGAGCAAAGTATCCAGTTACCCAATCAGCTCTCTaGTTACATCTTCTCCATCTGGGAAAAAGGGTCCTGCTGATTGGC | + |
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Preference number: 1 (lower is better) Translates to: STTPRAKYPVTQSAL*LHLLHLGKRVLLIG Trigger: GCCAATCAGCAGGACCCTTTTTCCCAGATGGAGAAGATGTAATCAGAGAGCTGATTGGGTAACTGGATACTTTGCTCTTGGGGTTGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR GCA 90 bp | CTCAGCTCTGTTAATAGTTTCCTGCCCATCTCAACCTACTCAGGATaGTTCCTGACAAGACATACTTGCGAAACCTCAAAGACACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LSSVNSFLPISTYSG*FLTRHTCETSKTLN Trigger: GTTCAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGGCAGGAAACTATTAACAGAGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR TCA 90 bp | TCCAAAGTGTCCATTACTGTATTTCATGTGATGGGAAGACTGCCCTaGAGATGTACTTCATATGGTAGGAGAACTGCTCTGGAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SKVSITVFHVMGRLP*RCTSYGRRTALERE Trigger: CTCTCTCTCCAGAGCAGTTCTCCTACCATATGAAGTACATCTTCAGGGCAGTCTTCCCATCACATGAAATACAGTAATGGACACTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR TCA 90 bp | GCTCCTAAGCATGACGGTCCAAAGTGTCCATTACTGTATTTCATGTaGTGGGAAGACTGCCCTGAAGATGTACTTCATATGGTAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: APKHDGPKCPLLYFM*WEDCPEDVLHMVGE Trigger: TTCTCCTACCATATGAAGTACATCTTCAGGGCAGTCTTCCCATCACATGAAATACAGTAATGGACACTTTGGACCGTCATGCTTAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR GCA 90 bp | TTAATATTCAAACGATTAGAAAGCATGTGTGTGGGACGTGGGAAATaGACATTTAATAACCCAGGGGTCACCCAACCCTCCACTCAATCA | + |
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Preference number: 1 (lower is better) Translates to: LIFKRLESMCVGRGK*TFNNPGVTQPSTQS Trigger: TGATTGAGTGGAGGGTTGGGTGACCCCTGGGTTATTAAATGTGCATTTCCCACGTCCCACACACATGCTTTCTAATCGTTTGAATATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGAAGACACTGAACTTCTaGGGGGCTCCTTGGCGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGTFPQLSWPTRCPLWPMKTLNF*GAPWRL Trigger: CAGACGCCAAGGAGCCCCTCAGAAGTTCAGTGTCTT...CATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | TATGCGATTTATGCAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATAAGGCAAACAGGACCTaGGACAGAGGTGGGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: YAIYAALEPSPAVGLQSHKANRT*DRGGDH Trigger: GTGGTCCCCACCTCTGTCCCAGGTCCTGTTTGCCTT...ATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTGCATAAATCGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATACCTGAGGGGCCTAGGTTCTTCCCTCCTTaGATTCAGGTGACAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: QRWSQAQRWGCRAIPEGPRFFPP*IQVTDL Trigger: AAGATCTGTCACCTGAATCCAAGGAGGGAAGAACCT...AGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATACCTGAGGGGCCTCTGACAAGACATACTTaGGAAACCTCAAAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: QRWSQAQRWGCRAIPEGPLTRHT*ETSKTL Trigger: CAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAG...AGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGCGGAATGGCACCTACTaGTATGGATTCCATATGGTA | + |
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Preference number: 2 (lower is better) Translates to: LGTFPQLSWPTRCPLWPMRNGTY*YGFHMV Trigger: TACCATATGGAATCCATACCAGTAGGTGCCATTCCG...CATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCACATATCCAGGCTCCATaGGGCTCTGCCTGGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSHIQAP*GSAWGR Trigger: TCGGCCCCAGGCAGAGCCCCATGGAGCCTGGATATG...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGAACCGTAGAAATGGCCTGAGCCAAGAGAGAGAACTCAGCCCAGCAGGTGAAAAAGGGTCCTGCTaGTTGGCTGCAAGTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: GQNRRNGLSQERELSPAGEKGSC*LAASIL Trigger: AAGGATACTTGCAGCCAATCAGCAGGACCCTTTTTC...ACCTGCTGGGCTGAGTTCTCTCTCTTGGCTCAGGCCATTTCTACGGTTCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR CAA 90 bp | CCTGCCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTaGCGAAACCTCAAAGACACTGAACTTCTGAGGGGCTCCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PAHLNLLRMLPDKTY*RNLKDTELLRGSLA Trigger: CGCCAAGGAGCCCCTCAGAAGTTCAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGTCCTCAACCCAATCAGCTCTCTaGTTACATCTTCTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: QTGPGTEVGTTVIENRSSTQSAL*LHLLHL Trigger: CAGATGGAGAAGATGTAATCAGAGAGCTGATTGGGT...TGAGGACCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAAAGACACTGAACTTCTaGGGGGCTCCTTGGCGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSKTLNF*GAPWRL Trigger: CAGACGCCAAGGAGCCCCTCAGAAGTTCAGTGTCTT...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAAAGGGTCCTGCTGATTaGCTGCAAGTATCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSKGPAD*LQVSLG Trigger: GCCCAAGGATACTTGCAGCCAATCAGCAGGACCCTT...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAAAGACACTGTGGCCTTTGGCTTCATaGGGCAACAATTGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TYSGCFLTRHTCETSKTLWPLAS*GNNCPR Trigger: CCTTGGGCAATTGTTGCCTCATGAAGCCAAAGGCCA...CAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCCTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGGGGCCTCCTGATGTGTaGACACCTCTCTGGATCAAT | + |
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Preference number: 2 (lower is better) Translates to: QALILHMQELRLGRWQDLGPPDV*TPLWIN Trigger: ATTGATCCAGAGAGGTGTGCACACATCAGGAGGCCC...CAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAGGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CAA 90 bp | CAATTCAGTGGCCCTGACCTTGGAATACTGTGCGGAGAAACACTTTaGATCTGTACTTGCTCCTCTGAGGTTCTTCCCTCCTTGGATTCA | + |
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Preference number: 2 (lower is better) Translates to: QFSGPDLGILCGETL*ICTCSSEVLPSLDS Trigger: TGAATCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCCAAGGTCAGGGCCACTGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAGAAAAAGGGTCCTGCTaGTTGGCTGCAAGTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSEKGSC*LAASIL Trigger: AAGGATACTTGCAGCCAATCAGCAGGACCCTTTTTC...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | CTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGCTCCGACTGTACTTGCTCCTCTaGGGTTCTTCCCTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LILHMQELRLGRWQDLLRLYLLL*GSSLLG Trigger: TCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAG...TCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTAAGCATGACGGTCCAAAGTGTCCATTACTGTATTTCATGTGATGGGAAGAAGGGTCCTGCTGATTaGCTGCAAGTATCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLSMTVQSVHYCISCDGKKGPAD*LQVSLG Trigger: GCCCAAGGATACTTGCAGCCAATCAGCAGGACCCTT...CTTCCCATCACATGAAATACAGTAATGGACACTTTGGACCGTCATGCTTAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR CAA 90 bp | TTCCATCCGTTGCTAGCGCAGGCCCTCATTTTACATATGCAGGAATaGAGGTTGGGAAGATGGCAGGATTTGCTCCGATTTATGCGATTT | + |
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Preference number: 2 (lower is better) Translates to: FHPLLAQALILHMQE*RLGRWQDLLRFMRF Trigger: AAATCGCATAAATCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAGGGCCTGCGCTAGCAACGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | AACATGAGCATCAATATTCAACGAACCAGGAGGAAGCAGACTGGATCGGTTCCTAAACCTCAAAGACACTaGACTTCTGAGGGGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NMSINIQRTRRKQTGSVPKPQRH*TSEGLL Trigger: AAGGAGCCCCTCAGAAGTTCAGTGTCTTTGAGGTTT...AGGAACCGATCCAGTCTGCTTCCTCCTGGTTCGTTGAATATTGATGCTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCACGGAATGGCACCTACTaGTATGGATTCCATATGGTA | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSRNGTY*YGFHMV Trigger: TACCATATGGAATCCATACCAGTAGGTGCCATTCCG...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR GCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCATTCCATATGGTAAACTaGATGGCCAGAACCGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: PISTYSGCFLTRHTCETSFHMVN*MARTVE Trigger: TTCTACGGTTCTGGCCATGCAGTTTACCATATGGAA...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATCTGTACTTGCTCCTCTGAGGTTCTTCCCTCCTTGGATTCAGGTGACAGACTGTTAATAGTTTCCTaGCCATCTCAACCTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: LICTCSSEVLPSLDSGDRLLIVS*PSQPTQ Trigger: CTGAGTAGGTTGAGATGGGCAGGAAACTATTAACAG...TCTGTCACCTGAATCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTAATGTCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGAACCCAATCAGCTCTCTaGTTACATCTTCTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: SGNVCHSEGSSSIHKKFRTQSAL*LHLLHL Trigger: CAGATGGAGAAGATGTAATCAGAGAGCTGATTGGGT...TCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGACATTACCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACATTTAATATTCAAACGATTAGAAAGCATGTGTGTGGGACGTGGGAAATGACTGGATCGGTTCCTTaGCTTAAATTGAGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: ETFNIQTIRKHVCGTWEMTGSVP*LKLRDG Trigger: GCCATCCCTCAATTTAAGTCAAGGAACCGATCCAGT...CATTTCCCACGTCCCACACACATGCTTTCTAATCGTTTGAATATTAAATGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CAA 90 bp | GGGCCAACAATCATGAAGGGTAGAGATCATATGGAACATTCTATCTaGGAAACATTTAATATTCAAACGATTAGAAAGCATGTGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GPTIMKGRDHMEHSI*ETFNIQTIRKHVCG Trigger: CCCACACACATGCTTTCTAATCGTTTGAATATTAAATGTTTCCAAGATAGAATGTTCCATATGATCTCTACCCTTCATGATTGTTGGCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR GCA 72 bp | TTTATGCAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTaGAGAGCCATACCTGAGGGGCCTCCTGATGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: FMQRWSQAQRWG*RAIPEGPPDVC Trigger: GCACACATCAGGAGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTGCATAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CCA 72 bp | ATGCGATTTATGCAGCGTTGGAGCCAAGCCCAGCGGTaGGGCTGCAGAGCCATACCTGAGGGGCCTCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: MRFMQRWSQAQR*GCRAIPEGPPD Trigger: ATCAGGAGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTGCATAAATCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CCA 72 bp | TCAAGTTGTCATATCCAGGCTCCATGGGGCTCTGCCTaGGGCCGAAAAGACCGGCTACGAGGTTATGATGGC | + |
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Preference number: 3 (lower is better) Translates to: SSCHIQAPWGSA*GRKDRLRGYDG Trigger: GCCATCATAACCTCGTAGCCGGTCTTTTCGGCCCCAGGCAGAGCCCCATGGAGCCTGGATATGACAACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR CCA 72 bp | CAGGATTTGCTCCGATTTATGCGATTTATGCAGCGTTaGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATA | + |
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Preference number: 3 (lower is better) Translates to: QDLLRFMRFMQR*SQAQRWGCRAI Trigger: TATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTGCATAAATCGCATAAATCGGAGCAAATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAAGCCCTAAGGTTTCCCTCTGGCCTTTGGCTTCATGAGGCAACAATTGCCTGGGGACCACTGTCATaGAGAACAGGTCCTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LEALRFPSGLWLHEATIAWGPLS*RTGPQH Trigger: GTGCTGAGGACCTGTTCTCAATGACAGTGGTCCCCA...GGCAATTGTTGCCTCATGAAGCCAAAGGCCAGAGGGAAACCTTAGGGCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR CCA 72 bp | ATACCTGAGGGGCCTCCTGATGTGTGCACACCTCTCTaGATCAATTCAGTGGCCCTGACCTTGGAATACTGT | + |
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Preference number: 3 (lower is better) Translates to: IPEGPPDVCTPL*INSVALTLEYC Trigger: ACAGTATTCCAAGGTCAGGGCCACTGAATTGATCCAGAGAGGTGTGCACACATCAGGAGGCCCCTCAGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CCA 72 bp | CGTCTGTGTTCCGAGGACAATACTGTTTGCCCCACATaGGCTCCTAAGCATGACGGTCCAAAGTGTCCATTA | + |
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Preference number: 3 (lower is better) Translates to: RLCSEDNTVCPT*APKHDGPKCPL Trigger: TAATGGACACTTTGGACCGTCATGCTTAGGAGCCCATGTGGGGCAAACAGTATTGTCCTCGGAACACAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR TCA 72 bp | GATTACATCTTCTCCATCTGGGAAAAAGGGTCCTGCTaGTTGGCTGCAAGTATCCTTGGGCAGCTCAAGCGA | + |
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Preference number: 3 (lower is better) Translates to: DYIFSIWEKGSC*LAASILGQLKR Trigger: TCGCTTGAGCTGCCCAAGGATACTTGCAGCCAATCAGCAGGACCCTTTTTCCCAGATGGAGAAGATGTAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR TCA 72 bp | AGACATACTTGCGAAACCTCAAAGACACTGAACTTCTaGGGGGCTCCTTGGCGTCTGTGTTCCGAGGACAAT | + |
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Preference number: 3 (lower is better) Translates to: RHTCETSKTLNF*GAPWRLCSEDN Trigger: ATTGTCCTCGGAACACAGACGCCAAGGAGCCCCTCAGAAGTTCAGTGTCTTTGAGGTTTCGCAAGTATGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| 3UTR TCA 72 bp | GCCCTGACCTTGGAATACTGTGCGGAGAAACACTTTTaGTCTGTACTTGCTCCTCTGAGGTTCTTCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: ALTLEYCAEKHF*SVLAPLRFFPP Trigger: AGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCCAAGGTCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGCTCCGAGCTAGCCAAGTCAAGTaGTCATATCCAGGCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: LILHMQELRLGRWQDLLRASQVK*SYPGSM Trigger: CATGGAGCCTGGATATGACAACTTGACTTGGCTAGC...TCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR-3UTR CAA 90 bp | TTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGCTCCGATTTATGGCTTCCCACAGAGCTaGGAACTCTGGGAAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FTYAGIEVGKMAGFAPIYGFPQS*ELWEVF Trigger: GAAGACTTCCCAGAGTTCCAAGCTCTGTGGGAAGCC...ATAAATCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR GCA 72 bp | GGAATACTGTGCGGAGAAACACTTTTGATCTGTACTTaGTCCTCTGAGGTTCTTCCCTCCTTGGATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GILCGETLLICT*SSEVLPSLDSG Trigger: ACCTGAATCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR TCA 72 bp | CCAAGAGCAAAGTATCCAGTTACCCAATCAGCTCTCTaGTTACATCTTCTCCATCTGGGAAAAAGGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRAKYPVTQSAL*LHLLHLGKRVL Trigger: CAGGACCCTTTTTCCCAGATGGAGAAGATGTAATCAGAGAGCTGATTGGGTAACTGGATACTTTGCTCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR GCA 72 bp | GTTAATAGTTTCCTGCCCATCTCAACCTACTCAGGATaGTTCCTGACAAGACATACTTGCGAAACCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VNSFLPISTYSG*FLTRHTCETSK Trigger: CTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGGCAGGAAACTATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACATTTAATATTCAAACGATTAGAAAGCATGTGTGTGGGACGTGGGAAATGTCAGTGGCCCTGACCTaGGAATACTGTGCGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ETFNIQTIRKHVCGTWEMSVALT*EYCAEK Trigger: TTTCTCCGCACAGTATTCCAAGGTCAGGGCCACTGA...CATTTCCCACGTCCCACACACATGCTTTCTAATCGTTTGAATATTAAATGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR TCA 72 bp | TCCATTACTGTATTTCATGTGATGGGAAGACTGCCCTaGAGATGTACTTCATATGGTAGGAGAACTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SITVFHVMGRLP*RCTSYGRRTAL Trigger: CAGAGCAGTTCTCCTACCATATGAAGTACATCTTCAGGGCAGTCTTCCCATCACATGAAATACAGTAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR TCA 72 bp | CATGACGGTCCAAAGTGTCCATTACTGTATTTCATGTaGTGGGAAGACTGCCCTGAAGATGTACTTCATATG | + |
|
Preference number: 3 (lower is better) Translates to: HDGPKCPLLYFM*WEDCPEDVLHM Trigger: CATATGAAGTACATCTTCAGGGCAGTCTTCCCATCACATGAAATACAGTAATGGACACTTTGGACCGTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR CCA 72 bp | CTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATaGCAGGATTTGCTCCGATTTATGCGATTTATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LILHMQELRLGR*QDLLRFMRFMQ Trigger: CTGCATAAATCGCATAAATCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATACCTGAGGGGCCTGGGTCCCGAGATGGGTaGGAAGCACACAGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRWSQAQRWGCRAIPEGPGSRDG*EAHRLA Trigger: GGCCAGTCTGTGTGCTTCCCACCCATCTCGGGACCC...AGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATACCTGAGGGGCCTCAGGGCCCCGGGCTTTaGGGTAAAAGTCCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRWSQAQRWGCRAIPEGPQGPGL*GKSPVP Trigger: TGGAACGGGACTTTTACCCCAAAGCCCGGGGCCCTG...AGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGTACCTTCTCCCCTTCCTTaGTGCGACGGAAGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDIPPAELANPVSSVAHVPSPLP*CDGRGA Trigger: GGCTCCCCTTCCGTCGCATCAAGGAAGGGGAGAAGG...TACATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGTTGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCATACCTGAGGGGCCTAGGTCAAGGTGCTTCTaGAGGAAGGCCAAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRWSQAQRWGCRAIPEGPRSRCF*RKAKMA Trigger: GGCCATCTTGGCCTTCCTGCAGAAGCACCTTGACCT...AGGCCCCTCAGGTATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGTAGCGGGAGAGCTCTCCTaGGAGGTCGGCTTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDIPPAELANPVSSVAHVAGELS*EVGLQK Trigger: CTTCTGCAAGCCGACCTCCCAGGAGAGCTCTCCCGC...TACATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGTCCTTCAGGTCAAGGTaGTTCTGCAGGAAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTFPQLSWPTRCPLWPMSFRSR*FCRKAK Trigger: CTTGGCCTTCCTGCAGAAGCACCTTGACCTGAAGGA...CATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGCAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGGTGCAGCCAATGTGGTaGGGTCCCGAGATGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQTGPGTEVGTTVIENRVQPMW*GPEMGG Trigger: CCCACCCATCTCGGGACCCCACCACATTGGCTGCAC...CCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTGCCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGTCCTCAGGACAGTCACGATCCTaGACTGCTCGTGCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTGPGTEVGTTVIENRSSGQSRS*TARAGH Trigger: GTGCCCAGCACGAGCAGTCCAGGATCGTGACTGTCC...TGAGGACCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | TTGCCCAAGGTGAGAGAGTGGGCTAGCCAAGTCAAGTaGTCATATCCAGGCTCCATGGGGCTCTGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKVREWASQVK*SYPGSMGLCLG Trigger: CCCCAGGCAGAGCCCCATGGAGCCTGGATATGACAACTTGACTTGGCTAGCCCACTCTCTCACCTTGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGTCCTCACCTCCATCACATCCGTaGAGCCAATGTGGTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTGPGTEVGTTVIENRSSPPSHP*SQCGGV Trigger: GACCCCACCACATTGGCTGCACGGATGTGATGGAGG...TGAGGACCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCCCTAAGGTTTCCCTCTGGCCTTTGGCTTCATGAGGCAACAATTGCCGGTGGGGTCCCGAGATaGGTGGGAAGCACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LEALRFPSGLWLHEATIAGGVPR*VGSTQT Trigger: AGTCTGTGTGCTTCCCACCCATCTCGGGACCCCACC...GGCAATTGTTGCCTCATGAAGCCAAAGGCCAGAGGGAAACCTTAGGGCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACATTCCCCCAGCTGAGCTGGCCAACCCGGTGTCCTCTGTGGCCCATGTAAACCCTCCTAGACCATaGGACAAGATGATCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDIPPAELANPVSSVAHVNPPRP*DKMIKG Trigger: CCCTTTGATCATCTTGTCCCATGGTCTAGGAGGGTT...TACATGGGCCACAGAGGACACCGGGTTGGCCAGCTCAGCTGGGGGAATGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | GCAGGATTTGCTCCGATTTATGCGATTTATGCAGCGTaGGAGCCAAGCCCAGCGGTGGGGCTGCAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGFAPIYAIYAA*EPSPAVGLQSH Trigger: ATGGCTCTGCAGCCCCACCGCTGGGCTTGGCTCCAACGCTGCATAAATCGCATAAATCGGAGCAAATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | TTCATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACCCTTCTCCCCTTCCTTaGTGCGACGGAAGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIVFNSGTVADIRSDSQHPSPLP*CDGRGA Trigger: GGCTCCCCTTCCGTCGCATCAAGGAAGGGGAGAAGG...GTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACGTGGCCGCAGCTGACTaGTCCCTGTGCTCTACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVFNSGTVADIRSDSQHVAAAD*SLCSTA Trigger: TGCCGTAGAGCACAGGGACCAGTCAGCTGCGGCCAC...GTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACAGAGCGGGAGAGCTCTCCTaGGAGGTCGGCTTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVFNSGTVADIRSDSQHRAGELS*EVGLQK Trigger: CTTCTGCAAGCCGACCTCCCAGGAGAGCTCTCCCGC...TCTGTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGCTGCTCGCACTTCTCTaGTGCTTGGCAAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRQTGPGTEVGTTVIENRLLALL*CLARVE Trigger: TTCTACCCTTGCCAAGCATCAGAGAAGTGCGAGCAG...CCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTGCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | ACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAAAGACACTGGTAGGTGGCCGCAGCTaGCTGGTCCCTGTGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TYSGCFLTRHTCETSKTLVGGRS*LVPVLY Trigger: GTAGAGCACAGGGACCAGTCAGCTGCGGCCACCTAC...CAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | TACTTCATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGGTAGGTGGCCGCAGCTaGCTGGTCCCTGTGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YFIVFNSGTVADIRSDSQVGGRS*LVPVLY Trigger: GTAGAGCACAGGGACCAGTCAGCTGCGGCCACCTAC...CTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTATGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGGTGGCCGCAGCTGACTaGTCCCTGTGCTCTACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QALILHMQELRLGRWQDLVAAAD*SLCSTA Trigger: TGCCGTAGAGCACAGGGACCAGTCAGCTGCGGCCAC...CAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGCAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGCTGGACTGCTCGTGCTaGGCACAGATCTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRQTGPGTEVGTTVIENRLDCSC*AQIFFI Trigger: GATGAAGAAGATCTGTGCCCAGCACGAGCAGTCCAG...CCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTGCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAGGACAGTCACGATCCTaGACTGCTCGTGCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PISTYSGCFLTRHTCETSGQSRS*TARAGH Trigger: GTGCCCAGCACGAGCAGTCCAGGATCGTGACTGTCC...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACAGACCTCCATCACATCCGTaGAGCCAATGTGGTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVFNSGTVADIRSDSQHRPPSHP*SQCGGV Trigger: GACCCCACCACATTGGCTGCACGGATGTGATGGAGG...TCTGTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTAAGCATGACGGTCCAAAGTGTCCATTACTGTATTTCATGTGATGGGAAGGGGTCCCGAGATGGGTaGGAAGCACACAGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSMTVQSVHYCISCDGKGSRDG*EAHRLA Trigger: GGCCAGTCTGTGTGCTTCCCACCCATCTCGGGACCC...CTTCCCATCACATGAAATACAGTAATGGACACTTTGGACCGTCATGCTTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | TACTTCATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCTCCCCTCAAGACTGTaGCCCTCCATCACATCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFIVFNSGTVADIRSDSQLPSRL*PSITSV Trigger: CACGGATGTGATGGAGGGTCACAGTCTTGAGGGGAG...CTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTATGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | ACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCAAAGACACTGGCTGACTGGTCCCTGTaGTCTACGGCAGCAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TYSGCFLTRHTCETSKTLADWSL*STAATT Trigger: TGTGGTTGCTGCCGTAGAGCACAGGGACCAGTCAGC...CAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGAGCCAGTCTGGGGTGGGGTCCCGAGATaGGTGGGAAGCACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVIQKGHPQYIRSSEPVWGGVPR*VGSTQT Trigger: AGTCTGTGTGCTTCCCACCCATCTCGGGACCCCACC...CCAGACTGGCTCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | GGCCCTGACCTTGGAATACTGTGCGGAGAAACACTTTaGATCTGTACTTGCTCCTCTGAGGTTCTTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPDLGILCGETL*ICTCSSEVLPS Trigger: GGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAAAAGTGTTTCTCCGCACAGTATTCCAAGGTCAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTACATCTTCTCCATCTGGGAAAAAGGGTCCTGCTGATTGGCTGCAAGTAAGGTCAAGGTGCTTCTaGAGGAAGGCCAAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LITSSPSGKKGPADWLQVRSRCF*RKAKMA Trigger: GGCCATCTTGGCCTTCCTGCAGAAGCACCTTGACCT...TACTTGCAGCCAATCAGCAGGACCCTTTTTCCCAGATGGAGAAGATGTAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCAACCTACTCAGGATGCTTCCTGACAAGACATACTTGCGAAACCTCATCCTTCAGGTCAAGGTaGTTCTGCAGGAAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PISTYSGCFLTRHTCETSSFRSR*FCRKAK Trigger: CTTGGCCTTCCTGCAGAAGCACCTTGACCTGAAGGA...TGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR GCA 90 bp | TTCATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACGTATCCAGACTCCTTTaGCTTAAAGGGGCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVFNSGTVADIRSDSQHVSRLL*LKGAVP Trigger: TGGAACGGCCCCTTTAAGGCAAAGGAGTCTGGATAC...GTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | CTCAACCTACTCAGGATGCTTCCTGACAAGACATACTaGCGAAACCTCAAAGACACTGAACTTCTGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNLLRMLPDKTY*RNLKDTELLRG Trigger: GCCCCTCAGAAGTTCAGTGTCTTTGAGGTTTCGCAAGTATGTCTTGTCAGGAAGCATCCTGAGTAGGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGCTCCGACTGCTCGCACTTCTCTaGTGCTTGGCAAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILHMQELRLGRWQDLLRLLALL*CLARVE Trigger: TTCTACCCTTGCCAAGCATCAGAGAAGTGCGAGCAG...TCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGACTGCCCTGAAGATGTACTTCATATGGTAGGAGAACTGCTCTGGAGAGACCATGGGACAAGATaGTCAAAGGGTATCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: WEDCPEDVLHMVGELLWRDHGTR*SKGIQT Trigger: AGTCTGGATACCCTTTGATCATCTTGTCCCATGGTC...TCTCCAGAGCAGTTCTCCTACCATATGAAGTACATCTTCAGGGCAGTCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGTAATGTCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGACAGGGCCCCGGGCTTTaGGGTAAAAGTCCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNVCHSEGSSSIHKKFRQGPGL*GKSPVP Trigger: TGGAACGGGACTTTTACCCCAAAGCCCGGGGCCCTG...TCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGACATTACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGAGCCAGTCTGGCTGGACTGCTCGTGCTaGGCACAGATCTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVIQKGHPQYIRSSEPVWLDCSC*AQIFFI Trigger: GATGAAGAAGATCTGTGCCCAGCACGAGCAGTCCAG...CCAGACTGGCTCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | TTGATCTGTACTTGCTCCTCTGAGGTTCTTCCCTCCTaGGATTCAGGTGACAGATCTTATATGGCAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LICTCSSEVLPS*DSGDRSYMAAT Trigger: TGTCGCTGCCATATAAGATCTGTCACCTGAATCCAAGGAGGGAAGAACCTCAGAGGAGCAAGTACAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | CATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTaGCTCCGATTTATGCGATTTATGCAGCGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMQELRLGRWQD*LRFMRFMQRWS Trigger: GCTCCAACGCTGCATAAATCGCATAAATCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| 3UTR CAA 72 bp | TTGCTAGCGCAGGCCCTCATTTTACATATGCAGGAATaGAGGTTGGGAAGATGGCAGGATTTGCTCCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQALILHMQE*RLGRWQDLLRF Trigger: AAATCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAGGGCCTGCGCTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
||
| CDS-3UTR TCA 90 bp | GAAACATTTAATATTCAAACGATTAGAAAGCATGTGTGTGGGACGTGGGAAATGCTCCCCTCAAGACTGTaGCCCTCCATCACATCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETFNIQTIRKHVCGTWEMLPSRL*PSITSV Trigger: CACGGATGTGATGGAGGGTCACAGTCTTGAGGGGAG...CATTTCCCACGTCCCACACACATGCTTTCTAATCGTTTGAATATTAAATGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS-3UTR TCA 90 bp | CTCATTTTACATATGCAGGAATTGAGGTTGGGAAGATGGCAGGATTTGCTCCGAGACCATGGGACAAGATaGTCAAAGGGTATCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: LILHMQELRLGRWQDLLRDHGTR*SKGIQT Trigger: AGTCTGGATACCCTTTGATCATCTTGTCCCATGGTC...TCGGAGCAAATCCTGCCATCTTCCCAACCTCAATTCCTGCATATGTAAAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| 3UTR CAA 72 bp | AAACAAGACAAAAGCAGACAACTAAAGCTCCCTGGTTaGAGTAAGAGGCAAGACGAAGCTCACCTCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: KQDKSRQLKLPG*SKRQDEAHLRP Trigger: AGGTCTGAGGTGAGCTTCGTCTTGCCTCTTACTCAAACCAGGGAGCTTTAGTTGTCTGCTTTTGTCTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAGCTCTGTTAATAGTTTCCTGCCCATCTCAACCTACTCAGGATGCTTCCAATTTGCTGGCCAACTaGGGTCTTCTATTATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSALLIVSCPSQPTQDASNLLAN*GLLLFL Trigger: CAGAAATAATAGAAGACCTCAGTTGGCCAGCAAATT...GGAAGCATCCTGAGTAGGTTGAGATGGGCAGGAAACTATTAACAGAGCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS-3UTR GCA 90 bp | AGTGGTAATGTCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGAGTATCCAGACTCCTTTaGCTTAAAGGGGCCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGNVCHSEGSSSIHKKFRVSRLL*LKGAVP Trigger: TGGAACGGCCCCTTTAAGGCAAAGGAGTCTGGATAC...TCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGACATTACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CCA 90 bp | AGTGGTAATGTCTGTCATTCAGAAGGGTCATCCTCAATACATAAGAAGTTCAGAAACCCTCCTAGACCATaGGACAAGATGATCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SGNVCHSEGSSSIHKKFRNPPRP*DKMIKG Trigger: CCCTTTGATCATCTTGTCCCATGGTCTAGGAGGGTT...TCTGAACTTCTTATGTATTGAGGATGACCCTTCTGAATGACAGACATTACCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 90 bp | CTCCATCACATCCGTGCAGCCAATGTGGTGGGGTCCCGAGATGGGTaGGAAGCACACAGACTGGCCGGCCCCCATCTCATCACCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LHHIRAANVVGSRDG*EAHRLAGPHLITSW Trigger: CCAGCTGGTGATGAGATGGGGGCCGGCCAGTCTGTGTGCTTCCCACCCATCTCGGGACCCCACCACATTGGCTGCACGGATGTGATGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS CCA 90 bp | GACCCTCCATCACATCCGTGCAGCCAATGTGGTGGGGTCCCGAGATaGGTGGGAAGCACACAGACTGGCCGGCCCCCATCTCATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: DPPSHPCSQCGGVPR*VGSTQTGRPPSHHQ Trigger: CTGGTGATGAGATGGGGGCCGGCCAGTCTGTGTGCTTCCCACCCATCTCGGGACCCCACCACATTGGCTGCACGGATGTGATGGAGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS TCA 90 bp | AGAGCTCTCCTGGGAGGTCGGCTTGCAGAAGTAGGTGGCCGCAGCTaGCTGGTCCCTGTGCTCTACGGCAGCAACCACAAAGCCACGAGA | + |
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Preference number: 5 (lower is better) Translates to: RALLGGRLAEVGGRS*LVPVLYGSNHKATR Trigger: TCTCGTGGCTTTGTGGTTGCTGCCGTAGAGCACAGGGACCAGTCAGCTGCGGCCACCTACTTCTGCAAGCCGACCTCCCAGGAGAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 90 bp | GTCGGAAGAGGCTCCCCTCAAGACTGTGACCCTCCATCACATCCGTaGAGCCAATGTGGTGGGGTCCCGAGATGGGTGGGAAGCACACAG | + |
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Preference number: 5 (lower is better) Translates to: VGRGSPQDCDPPSHP*SQCGGVPRWVGSTQ Trigger: CTGTGTGCTTCCCACCCATCTCGGGACCCCACCACATTGGCTGCACGGATGTGATGGAGGGTCACAGTCTTGAGGGGAGCCTCTTCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 ENSMUST00000132658.2 |
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| CDS CCA 90 bp | ATTCAGCGGGAGAGCTCTCCTGGGAGGTCGGCTTGCAGAAGTAGGTaGCCGCAGCTGACTGGTCCCTGTGCTCTACGGCAGCAACCACAA | + |
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Preference number: 5 (lower is better) Translates to: IQRESSPGRSACRSR*PQLTGPCALRQQPQ Trigger: TTGTGGTTGCTGCCGTAGAGCACAGGGACCAGTCAGCTGCGGCCACCTACTTCTGCAAGCCGACCTCCCAGGAGAGCTCTCCCGCTGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 90 bp | AGGATCCGCAGCACTCGCACACACTCTTTCACCCGCTGGTGCACCTaGGGATTCCTGACGTGGAACTCCTTCTCCCCTTCCTTGATGCGA | + |
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Preference number: 5 (lower is better) Translates to: RIRSTRTHSFTRWCT*GFLTWNSFSPSLMR Trigger: TCGCATCAAGGAAGGGGAGAAGGAGTTCCACGTCAGGAATCCTCAGGTGCACCAGCGGGTGAAAGAGTGTGTGCGAGTGCTGCGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 90 bp | TGCTGCCCTTCAAGGTCATCAGATCCAGTCCTCCTGGGAAGACATTaGCGACAGTCTTCCCAGCAGAGGCGTCCTGAAGGATCCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CCPSRSSDPVLLGRH*RQSSQQRRPEGSAA Trigger: TGCTGCGGATCCTTCAGGACGCCTCTGCTGGGAAGACTGTCGTCAATGTCTTCCCAGGAGGACTGGATCTGATGACCTTGAAGGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 90 bp | CTCCTCCAAAGGAGTGACCCATCACGGCTACGCGGTTCCTGTCGATaGTGCCCTTCAAGGTCATCAGATCCAGTCCTCCTGGGAAGACAT | + |
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Preference number: 5 (lower is better) Translates to: LLQRSDPSRLRGSCR*CPSRSSDPVLLGRH Trigger: ATGTCTTCCCAGGAGGACTGGATCTGATGACCTTGAAGGGCAGCATCGACAGGAACCGCGTAGCCGTGATGGGTCACTCCTTTGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 90 bp | GTTCCTGTCGATGCTGCCCTTCAAGGTCATCAGATCCAGTCCTCCTaGGAAGACATTGACGACAGTCTTCCCAGCAGAGGCGTCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPVDAALQGHQIQSS*EDIDDSLPSRGVLK Trigger: CTTCAGGACGCCTCTGCTGGGAAGACTGTCGTCAATGTCTTCCCAGGAGGACTGGATCTGATGACCTTGAAGGGCAGCATCGACAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 90 bp | TCCAGAGGGAACATCCAAGCGTCCAGGGCTATAGCACACCGAAACTaGACCTCCTGGGTCAAAGCAAGAACAGCCGTAGCTCCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGNIQASRAIAHRN*TSWVKARTAVAPPK Trigger: CTTTGGAGGAGCTACGGCTGTTCTTGCTTTGACCCAGGAGGTCCAGTTTCGGTGTGCTATAGCCCTGGACGCTTGGATGTTCCCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 90 bp | TCAGGTCAAGGTGCTTCTGCAGGAAGGCCAAGATGGCCCTCACCATaGCCTCCTGACTTTCGTAAGGGTCCAAGGTACCACGAGAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQGASAGRPRWPSP*PPDFRKGPRYHESY Trigger: GTAACTCTCGTGGTACCTTGGACCCTTACGAAAGTCAGGAGGTCATGGTGAGGGCCATCTTGGCCTTCCTGCAGAAGCACCTTGACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | CAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGTCCTCAGATGAAGCTGCTCCATaGATCGTAGTCTTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QTGPGTEVGTTVIENRSSDEAAP*IVVFLQ Trigger: CTGAAGGAAGACTACGATCAATGGAGCAGCTTCATC...TGAGGACCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 90 bp | TCCATGCAGAAGGCCGAGTATGACGCCCTGAACCCTCCTAGACCATaGGACAAGATGATCAAAGGGTATCCAGACTCCTTTGCCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMQKAEYDALNPPRP*DKMIKGYPDSFALK Trigger: CTTTAAGGCAAAGGAGTCTGGATACCCTTTGATCATCTTGTCCCATGGTCTAGGAGGGTTCAGGGCGTCATACTCGGCCTTCTGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | TTAAGGCAAACAGGACCTGGGACAGAGGTGGGGACCACTGTCATTGAGAACAGGTGGAATTTCTCGACGTaGATAAAGAACACAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRQTGPGTEVGTTVIENRWNFST*IKNTGP Trigger: GGGCCCTGTGTTCTTTATCAACGTCGAGAAATTCCA...CCTGTTCTCAATGACAGTGGTCCCCACCTCTGTCCCAGGTCCTGTTTGCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACAGAAAAGGCAAAGTCAGTTaGACTCCGATGAACAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVFNSGTVADIRSDSQHRKGKVS*TPMNSA Trigger: GGCGCTGTTCATCGGAGTCAAACTGACTTTGCCTTT...TCTGTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | TGGGAAGACTGCCCTGAAGATGTACTTCATATGGTAGGAGAACTGCTCTGGAGATGGAATTTCTCGACGTaGATAAAGAACACAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WEDCPEDVLHMVGELLWRWNFST*IKNTGP Trigger: GGGCCCTGTGTTCTTTATCAACGTCGAGAAATTCCA...TCTCCAGAGCAGTTCTCCTACCATATGAAGTACATCTTCAGGGCAGTCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTTAACTCAGGCACAGTGGCTGATATCAGGTCCGATTCCCAGCACAGAATCTTCTTCATCAAGTaGACGCTCTCTACCGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: IVFNSGTVADIRSDSQHRIFFIK*TLSTVW Trigger: CCAGACGGTAGAGAGCGTCAACTTGATGAAGAAGAT...TCTGTGCTGGGAATCGGACCTGATATCAGCCACTGTGCCTGAGTTAAAGACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS-3UTR CAA 90 bp | CTCCTAAGCATGACGGTCCAAAGTGTCCATTACTGTATTTCATGTGATGGGAAGATCTTCTTCATCAAGTaGACGCTCTCTACCGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLSMTVQSVHYCISCDGKIFFIK*TLSTVW Trigger: CCAGACGGTAGAGAGCGTCAACTTGATGAAGAAGAT...CTTCCCATCACATGAAATACAGTAATGGACACTTTGGACCGTCATGCTTAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 72 bp | GGCTCCCCTCAAGACTGTGACCCTCCATCACATCCGTaGAGCCAATGTGGTGGGGTCCCGAGATGGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPQDCDPPSHP*SQCGGVPRWVG Trigger: TCCCACCCATCTCGGGACCCCACCACATTGGCTGCACGGATGTGATGGAGGGTCACAGTCTTGAGGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 ENSMUST00000132658.2 |
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| CDS GCA 72 bp | GAGATTCAGCGGGAGAGCTCTCCTGGGAGGTCGGCTTaGAGAAGTAGGTGGCCGCAGCTGACTGGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EIQRESSPGRSA*RSRWPQLTGPC Trigger: ACAGGGACCAGTCAGCTGCGGCCACCTACTTCTGCAAGCCGACCTCCCAGGAGAGCTCTCCCGCTGAATCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 72 bp | CTGGGAGGTCGGCTTGCAGAAGTAGGTGGCCGCAGCTaGCTGGTCCCTGTGCTCTACGGCAGCAACCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGGRLAEVGGRS*LVPVLYGSNHK Trigger: TTTGTGGTTGCTGCCGTAGAGCACAGGGACCAGTCAGCTGCGGCCACCTACTTCTGCAAGCCGACCTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 72 bp | GTAGCGGGGAATCCACAGGGGCTGCTCGCACTTCTCTaGTGCTTGGCAAGGGTAGAAGAGTCGGAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VAGNPQGLLALL*CLARVEESEEA Trigger: AGCCTCTTCCGACTCTTCTACCCTTGCCAAGCATCAGAGAAGTGCGAGCAGCCCCTGTGGATTCCCCGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 ENSMUST00000132658.2 |
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| CDS TCA 72 bp | AGCACTCGCACACACTCTTTCACCCGCTGGTGCACCTaGGGATTCCTGACGTGGAACTCCTTCTCCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: STRTHSFTRWCT*GFLTWNSFSPS Trigger: GGAAGGGGAGAAGGAGTTCCACGTCAGGAATCCTCAGGTGCACCAGCGGGTGAAAGAGTGTGTGCGAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 72 bp | GGCCCCCATCTCATCACCAGCTGGACCAAAGCCGGGTaGTCGGGAATTTGCTGGCCAACTGAGGTCTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GPHLITSWTKAG*SGICWPTEVFY Trigger: ATAGAAGACCTCAGTTGGCCAGCAAATTCCCGAGCACCCGGCTTTGGTCCAGCTGGTGATGAGATGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS GCA 72 bp | AGTGACCCATCACGGCTACGCGGTTCCTGTCGATGCTaGCCTTCAAGGTCATCAGATCCAGTCCTCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SDPSRLRGSCRC*PSRSSDPVLLG Trigger: TCCCAGGAGGACTGGATCTGATGACCTTGAAGGGCAGCATCGACAGGAACCGCGTAGCCGTGATGGGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 72 bp | AGGAGTGACCCATCACGGCTACGCGGTTCCTGTCGATaGTGCCCTTCAAGGTCATCAGATCCAGTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSDPSRLRGSCR*CPSRSSDPVLL Trigger: CAGGAGGACTGGATCTGATGACCTTGAAGGGCAGCATCGACAGGAACCGCGTAGCCGTGATGGGTCACTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 72 bp | GGTGCTTCTGCAGGAAGGCCAAGATGGCCCTCACCATaGCCTCCTGACTTTCGTAAGGGTCCAAGGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GASAGRPRWPSP*PPDFRKGPRYH Trigger: GTGGTACCTTGGACCCTTACGAAAGTCAGGAGGTCATGGTGAGGGCCATCTTGGCCTTCCTGCAGAAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS GCA 72 bp | AGCGCTTGTTATACTGCAGGTAATCGGCCAGACCCATaGTGTACTCGTAGCGGGGAATCCACAGGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SACYTAGNRPDP*CTRSGESTGAA Trigger: AGCAGCCCCTGTGGATTCCCCGCTACGAGTACAGCATGGGTCTGGCCGATTACCTGCAGTATAACAAGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 ENSMUST00000132658.2 |
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| CDS GCA 72 bp | ACAGCGCCTAGGACAGTCACGATCCTGGACTGCTCGTaGTGGGCACAGATCTTCTTCATCAAGTTGACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TAPRTVTILDCS*WAQIFFIKLTL Trigger: GAGCGTCAACTTGATGAAGAAGATCTGTGCCCAGCACGAGCAGTCCAGGATCGTGACTGTCCTAGGCGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS TCA 72 bp | TCAAGGTCATCAGATCCAGTCCTCCTGGGAAGACATTaGCGACAGTCTTCCCAGCAGAGGCGTCCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSDPVLLGRH*RQSSQQRRPEG Trigger: TCCTTCAGGACGCCTCTGCTGGGAAGACTGTCGTCAATGTCTTCCCAGGAGGACTGGATCTGATGACCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CAA 72 bp | CAGCTAACAGGCAAGCGACAAGATCCGATACCCACGTaGAACAGCAACCCCACCCAGCGCTTGTTATACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLTGKRQDPIPT*NSNPTQRLLYC Trigger: GCAGTATAACAAGCGCTGGGTGGGGTTGCTGTTCAACGTGGGTATCGGATCTTGTCGCTTGCCTGTTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 ENSMUST00000132658.2 |
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| CDS GCA 72 bp | ATCACCAGCTGGACCAAAGCCGGGTGCTCGGGAATTTaGTGGCCAACTGAGGTCTTCTATTATTTCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ITSWTKAGCSGI*WPTEVFYYFWH Trigger: ATGCCAGAAATAATAGAAGACCTCAGTTGGCCAGCAAATTCCCGAGCACCCGGCTTTGGTCCAGCTGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105870.8 |
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| CDS GCA 72 bp | ATGGGACAAGATGATCAAAGGGTATCCAGACTCCTTTaGCTTAAAGGGGCCGTTCCAGCTAACAGGCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: MGQDDQRVSRLL*LKGAVPANRQA Trigger: CGCTTGCCTGTTAGCTGGAACGGCCCCTTTAAGGCAAAGGAGTCTGGATACCCTTTGATCATCTTGTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 72 bp | AAGGCCGAGTATGACGCCCTGAACCCTCCTAGACCATaGGACAAGATGATCAAAGGGTATCCAGACTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KAEYDALNPPRP*DKMIKGYPDSF Trigger: AAAGGAGTCTGGATACCCTTTGATCATCTTGTCCCATGGTCTAGGAGGGTTCAGGGCGTCATACTCGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CAA 72 bp | GACTGCTCGTGCTGGGCACAGATCTTCTTCATCAAGTaGACGCTCTCTACCGTCTGGAATTTCTCGACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DCSCWAQIFFIK*TLSTVWNFSTL Trigger: CAACGTCGAGAAATTCCAGACGGTAGAGAGCGTCAACTTGATGAAGAAGATCTGTGCCCAGCACGAGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CAA 90 bp | ACGATCCTGGACTGCTCGTGCTGGGCACAGATCTTCTTCATCAAGTaGACGCTCTCTACCGTCTGGAATTTCTCGACGTTGATAAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TILDCSCWAQIFFIK*TLSTVWNFSTLIKN Trigger: GTTCTTTATCAACGTCGAGAAATTCCAGACGGTAGAGAGCGTCAACTTGATGAAGAAGATCTGTGCCCAGCACGAGCAGTCCAGGATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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| CDS CCA 72 bp | CAGATCTTCTTCATCAAGTTGACGCTCTCTACCGTCTaGAATTTCTCGACGTTGATAAAGAACACAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QIFFIKLTLSTV*NFSTLIKNTGP Trigger: GGGCCCTGTGTTCTTTATCAACGTCGAGAAATTCCAGACGGTAGAGAGCGTCAACTTGATGAAGAAGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105869.9 ENSMUST00000105870.8 |
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