Pregenerated sensors for PAFAH1B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020745Ensembl transcript IDs: ENSMUST00000021091.15, ENSMUST00000102520.9
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAAGGACAGCTTTGTTACAGAGCACTCTCTCCTCCGTTGTCAGTaGGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SKDSFVTEHSLLRCQ*VTAAGEETQQLCSS Trigger: AGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAACGGAGGAGAGAGTGCTCTGTAACAAAGCTGTCCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR GCA 90 bp | CAGCTTTGTTACAGAGCACTCTCTCCTCCGTTGTCAGTGAGTCACTaGTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACATTGGT | + |
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Preference number: 1 (lower is better) Translates to: QLCYRALSPPLSVSH*CRGGNPAALLLYIG Trigger: ACCAATGTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAACGGAGGAGAGAGTGCTCTGTAACAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR GCA 90 bp | AAGGGCATCAACAGGGCAGTGTCAAACAACAGTGTGAGAAACCTTTaGAAATCCGATGCCAGATGTGGATGTTGCCCCGCCACCCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: KGINRAVSNNSVRNL*KSDARCGCCPATLH Trigger: ATGAAGGGTGGCGGGGCAACATCCACATCTGGCATCGGATTTGCAAAGGTTTCTCACACTGTTGTTTGACACTGCCCTGTTGATGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR CCA 90 bp | ACAAACCAACCTGCAGCTTGCACTCTCCATGCGGTTAGGACTTCTTaGGCACGCTGTGCTATAGGTGGCACTGGAATGTCTGTTTACACA | + |
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Preference number: 1 (lower is better) Translates to: TNQPAACTLHAVRTS*ARCAIGGTGMSVYT Trigger: TGTGTAAACAGACATTCCAGTGCCACCTATAGCACAGCGTGCCCAAGAAGTCCTAACCGCATGGAGAGTGCAAGCTGCAGGTTGGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR TCA 90 bp | TGTGGACCATCCCTGAGATTCAATGTTTTCTGCTGCTTAAATGGATaGTGTCTGGTAACTCAGCTAAGCAGCAGGCTGTGGCATTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: CGPSLRFNVFCCLNG*CLVTQLSSRLWHSP Trigger: GGGAGAATGCCACAGCCTGCTGCTTAGCTGAGTTACCAGACATCATCCATTTAAGCAGCAGAAAACATTGAATCTCAGGGATGGTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR TCA 90 bp | AACATAAGAGTAAGGGCATCAACAGGGCAGTGTCAAACAACAGTGTaGGAAACCTTTGCAAATCCGATGCCAGATGTGGATGTTGCCCCG | + |
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Preference number: 1 (lower is better) Translates to: NIRVRASTGQCQTTV*ETFANPMPDVDVAP Trigger: CGGGGCAACATCCACATCTGGCATCGGATTTGCAAAGGTTTCTCACACTGTTGTTTGACACTGCCCTGTTGATGCCCTTACTCTTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR CCA 90 bp | CAGCTGTGGACCATCCCTGAGATTCAATGTTTTCTGCTGCTTAAATaGATGATGTCTGGTAACTCAGCTAAGCAGCAGGCTGTGGCATTC | + |
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Preference number: 1 (lower is better) Translates to: QLWTIPEIQCFLLLK*MMSGNSAKQQAVAF Trigger: GAATGCCACAGCCTGCTGCTTAGCTGAGTTACCAGACATCATCCATTTAAGCAGCAGAAAACATTGAATCTCAGGGATGGTCCACAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR TCA 90 bp | ATCTGGGAACTGTTTTCTCCAATGACCACCTCTGCAACGTTCATATaGAATCAATGTTTGCCTTCATGTCAGTGTCAGGACCGGCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: IWELFSPMTTSATFI*NQCLPSCQCQDRLL Trigger: TAGAAGCCGGTCCTGACACTGACATGAAGGCAAACATTGATTTCATATGAACGTTGCAGAGGTGGTCATTGGAGAAAACAGTTCCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR TCA 90 bp | TTTGTGTTTATTTCTAACGTCTTCAGAGTGAGCTTTGGGGATGCCTaGAGGATAAGCAGGCAAGAAAGCAGCTACTTACATGATACAGTG | + |
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Preference number: 1 (lower is better) Translates to: FVFISNVFRVSFGDA*RISRQESSYLHDTV Trigger: CACTGTATCATGTAAGTAGCTGCTTTCTTGCCTGCTTATCCTTCAGGCATCCCCAAAGCTCACTCTGAAGACGTTAGAAATAAACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR TCA 90 bp | AGCAGCTTTGCTCCTCTACATTGGTACCATTCTTTATTGTTTCTATaGATGATGTCTAGATGTTGTGGCTTACCCTTAAACAATTCATGT | + |
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Preference number: 1 (lower is better) Translates to: SSFAPLHWYHSLLFL*MMSRCCGLPLNNSC Trigger: ACATGAATTGTTTAAGGGTAAGCCACAACATCTAGACATCATTCATAGAAACAATAAAGAATGGTACCAATGTAGAGGAGCAAAGCTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCCTCCTCCGTTGTCAGTaGGTCACTGCTGCAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASLLRCQ*VTAAGE Trigger: CTCCCCTGCAGCAGTGACTCACTGACAACGGAGGAG...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCCTTGTAGGCCTGGTGTaGCCAATGCCAGCCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASLVGLV*PMPAQV Trigger: AACCTGGGCTGGCATTGGTCACACCAGGCCTACAAG...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTCAGTGAGTCACTGCTaGAGGGGAGGAAACCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASSVSHC*RGGNPA Trigger: TGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR CAA 90 bp | TCAGCTAAGCAGCAGGCTGTGGCATTCTCCCAAGTAAGGACAGCTTaGTTACAGAGCACTCTCTCCTCCGTTGTCAGTGAGTCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SAKQQAVAFSQVRTA*LQSTLSSVVSESLL Trigger: CAGCAGTGACTCACTGACAACGGAGGAGAGAGTGCTCTGTAACAAAGCTGTCCTTACTTGGGAGAATGCCACAGCCTGCTGCTTAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTTGTGGGTAGTGCTCTaGGCACACCATTGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASLWVVL*AHHWSH Trigger: GTGTGACCAATGGTGTGCTCAGAGCACTACCCACAA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACTCCACTCCTTTAAAATaGGCACCCAGCTTTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSVSHCCRGGNPAALLLYSTPLK*APSFVS Trigger: GCTGACAAAGCTGGGTGCGCATTTTAAAGGAGTGGA...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTTGTCAGTGAGTCACTaGTGCAGGGGAGGAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASLSVSH*CRGGNP Trigger: TGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTCTTGTAGGCCTGGTGTaGCCAATGCCAGCCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KSSSESETAEEFSMAVVGLVGLV*PMPAQV Trigger: AACCTGGGCTGGCATTGGTCACACCAGGCCTACAAG...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCCTCCTCCGTTGTCAGTaGGTCACTGCTGCAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFLLRCQ*VTAAGE Trigger: CTCCCCTGCAGCAGTGACTCACTGACAACGGAGGAG...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCGCCTGGTGTGACCAATaGCAGCCCAGGTTTTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASAWCDQ*QPRFLN Trigger: GTTTAAAAACCTGGGCTGGCATTGGTCACACCAGGC...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACAAGATCAAATTCTACTaGGGAGTCACATCACTACAC | + |
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Preference number: 2 (lower is better) Translates to: LSVSHCCRGGNPAALLLYKIKFY*GVTSLH Trigger: GTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTT...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACCTACAGTGTTGTTTATaGGAGTCACGATGGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSVSHCCRGGNPAALLLYLQCCL*ESRWSF Trigger: AAAACTCCATCGTGACTCCCATAAACAACACTGTAG...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCACGCTGTGCTATAGGTaGCACTGGAATGTCTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASTLCYR*HWNVCL Trigger: TAAACAGACATTCCAGTGCCACCTATAGCACAGCGT...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTGCTGCTTAAATGGATaGTGTCTGGTAACTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASCCLNG*CLVTQL Trigger: TAGCTGAGTTACCAGACATCATCCATTTAAGCAGCA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACCTTTGCTTGATAGGCTaGCAAAACAAACATATCCTA | + |
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Preference number: 2 (lower is better) Translates to: LSVSHCCRGGNPAALLLYLCLIG*QNKHIL Trigger: TAGGATATGTTTGTTTTGGCAGCCTATCAAGCAAAG...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTGCTATAGGTGGCACTaGAATGTCTGTTTACACACA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASCYRWH*NVCLHT Trigger: TGTGTGTAAACAGACATTCCAGTGCCACCTATAGCA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACTTCATAATTCTGACATaGACATTGCACATCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LSVSHCCRGGNPAALLLYFIILT*TLHIPK Trigger: TTTAGGGATGTGCAATGTGCATGTCAGAATTATGAA...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTTCCACTCCTTTAAAATaGGCACCCAGCTTTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: KSSSESETAEEFSMAVVGSTPLK*APSFVS Trigger: GCTGACAAAGCTGGGTGCGCATTTTAAAGGAGTGGA...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGCCCCGCCACCCTTCATTATTCAAACAGGGCTCGTTAAGTTTGGATCCACACAGTCCAACAGTCTaGAGAATACAACTCGCATGT | + |
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Preference number: 2 (lower is better) Translates to: MLPRHPSLFKQGSLSLDPHSPTV*RIQLAC Trigger: ACATGCGAGTTGTATTCTCCAGACTGTTGGACTGTG...TGGATCCAAACTTAACGAGCCCTGTTTGAATAATGAAGGGTGGCGGGGCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCGCTGTGGACCATCCCTaGGATTCAATGTTTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFAVDHP*DSMFSA Trigger: AGCAGAAAACATTGAATCTCAGGGATGGTCCACAGC...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCGTTTGGATCCAGCTGTaGACCATCCCTGAGATTCAA | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFVWIQL*TIPEIQ Trigger: TTGAATCTCAGGGATGGTCCACAGCTGGATCCAAAC...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTCATGTGAAAAGCAACTATTCTTCAGGTCATGTCTACACAAACCAACCTGCGCCTGGTGTGACCAATaGCAGCCCAGGTTTTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: MSCEKQLFFRSCLHKPTCAWCDQ*QPRFLN Trigger: GTTTAAAAACCTGGGCTGGCATTGGTCACACCAGGC...GCAGGTTGGTTTGTGTAGACATGACCTGAAGAATAGTTGCTTTTCACATGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCTTCATAATTCTGACATaGACATTGCACATCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: TERGKQETGLGEPKAKASFIILT*TLHIPK Trigger: TTTAGGGATGTGCAATGTGCATGTCAGAATTATGAA...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTACCCAGTATATTCTATaGACGCTTCATTACACCCTG | + |
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Preference number: 2 (lower is better) Translates to: KSSSESETAEEFSMAVVGTQYIL*TLHYTL Trigger: CAGGGTGTAATGAAGCGTGCATAGAATATACTGGGT...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGCCCCGCCACCCTTCATTATTCAAACAGGGCTCGTTAAGTTTGGATCCATCCCCATTACACAGATaGAGCAAAGATTCTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: MLPRHPSLFKQGSLSLDPSPLHR*SKDSEL Trigger: CAATTCAGAATCTTTGCTCCATCTGTGTAATGGGGA...TGGATCCAAACTTAACGAGCCCTGTTTGAATAATGAAGGGTGGCGGGGCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCGTTGCTTGTCTACCATaGCATTCCTTTTTGCACCAT | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFVACLP*HSFLHH Trigger: ATGGTGCAAAAAGGAATGTCATGGTAGACAAGCAAC...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCTTATCAGGGTCATGTTaGAAACTGTTCCTTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFLSGSC*KLFLPL Trigger: GAGTGGAAGGAACAGTTTCCAACATGACCCTGATAA...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAATGGGAAGATCAAATTCTACTGGGGAGTCACATCACTACACAGTCCAACAACAAACATATCCTATTaGTTTGGCAAAGGGGTCATG | + |
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Preference number: 2 (lower is better) Translates to: LNGKIKFYWGVTSLHSPTTNISY*FGKGVM Trigger: CATGACCCCTTTGCCAAATCAATAGGATATGTTTGT...TGTTGGACTGTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTTCCCATTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTCATATCCTATTGATTTaGCAAAGGGGTCATGACAAA | + |
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Preference number: 2 (lower is better) Translates to: KSSSESETAEEFSMAVVGHILLI*QRGHDK Trigger: TTTGTCATGACCCCTTTGCCAAATCAATAGGATATG...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCCTTAGTCTCCTAAAGTaGAAGATGTCATGTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFLSLLK*KMSCEK Trigger: CTTTTCACATGACATCTTGCACTTTAGGAGACTAAG...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCTTTCTGCTGCTTAAATaGATGATGTCTGGTAACTCA | + |
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Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFFLLLK*MMSGNS Trigger: TGAGTTACCAGACATCATCCATTTAAGCAGCAGAAA...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCATGTGAAAAGCAACTATTCTTCAGGTCATGTCTACACAAACCAACCTGCGGAGAACAAAGGAAGTaGCTTTCTCTTAGAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: MSCEKQLFFRSCLHKPTCGEQRK*LSLRKA Trigger: AGCTTTTCTAAGAGAAAGTCACTTCCTTTGTTCTCC...GCAGGTTGGTTTGTGTAGACATGACCTGAAGAATAGTTGCTTTTCACATGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAACCTAAAGTAGGACAGTaGTTCCTGACCTGTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQEPKVGQ*FLTCLQ Trigger: TTGTAAACAGGTCAGGAAGCACTGTCCTACTTTAGG...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCTACCATAACACTCAATaGGAAGATCAAATTCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFYHNTQ*EDQILL Trigger: CAGTAGAATTTGATCTTCCCATTGAGTGTTATGGTA...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAACTACAGTGTTGTTTATaGGAGTCACGATGGAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQELQCCL*ESRWSF Trigger: AAAACTCCATCGTGACTCCCATAAACAACACTGTAG...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATTGCTGCTTAAATGGATaGTGTCTGGTAACTCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYCCLNG*CLVTQL Trigger: TAGCTGAGTTACCAGACATCATCCATTTAAGCAGCA...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATGTAACAAAGCAGCAGTaGACCGCTAACCAATTCATA | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYVTKQQ*TANQFI Trigger: TATGAATTGGTTAGCGGTTCACTGCTGCTTTGTTAC...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAACTTTGCTTGATAGGCTaGCAAAACAAACATATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQELCLIG*QNKHIL Trigger: TAGGATATGTTTGTTTTGGCAGCCTATCAAGCAAAG...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATACCCAGTATATTCTATaGACGCTTCATTACACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYTQYIL*TLHYTL Trigger: CAGGGTGTAATGAAGCGTGCATAGAATATACTGGGT...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAACATATCCTATTGATTTaGCAAAGGGGTCATGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQEHILLI*QRGHDK Trigger: TTTGTCATGACCCCTTTGCCAAATCAATAGGATATG...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAATTATGGGAGTCACGATaGAGTTTTTGTCCTCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQELWESR*SFCPQK Trigger: TTTTTGAGGACAAAAACTCCATCGTGACTCCCATAA...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATAAAATATACAGCCTATaGGGAATGCGTAACATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYKIYSL*GMRNMV Trigger: CACCATGTTACGCATTCCTCATAGGCTGTATATTTT...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATTCCCCATTACACAGATaGAGCAAAGATTCTGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYSPLHR*SKDSEL Trigger: CAATTCAGAATCTTTGCTCCATCTGTGTAATGGGGA...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATAAGATCAAATTCTACTaGGGAGTCACATCACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYKIKFY*GVTSLH Trigger: GTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTT...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAATACCATAACACTCAATaGGAAGATCAAATTCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: FAPSRLINTLGLYTAGQEYHNTQ*EDQILL Trigger: CAGTAGAATTTGATCTTCCCATTGAGTGTTATGGTA...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CAA 90 bp | AGCCTAATCTCTTGTGTATATCTACAGGACATTAATTCTCACCCTTaGTCCTTTCAGGAACCAAATTTCCATTCAATACTTAAAGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SLISCVYLQDINSHP*SFQEPNFHSILKGI Trigger: AATCCCTTTAAGTATTGAATGGAAATTTGGTTCCTGAAAGGACAAAGGGTGAGAATTAATGTCCTGTAGATATACACAAGAGATTAGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATTTATGGGAGTCACGATaGAGTTTTTGTCCTCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VYTHNQQPSEYTILSAFYLWESR*SFCPQK Trigger: TTTTTGAGGACAAAAACTCCATCGTGACTCCCATAA...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR GCA 72 bp | TACAGAGCACTCTCTCCTCCGTTGTCAGTGAGTCACTaGTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: YRALSPPLSVSH*CRGGNPAALLL Trigger: GAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAACGGAGGAGAGAGTGCTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CCA 72 bp | CCTGCAGCTTGCACTCTCCATGCGGTTAGGACTTCTTaGGCACGCTGTGCTATAGGTGGCACTGGAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PAACTLHAVRTS*ARCAIGGTGMS Trigger: AGACATTCCAGTGCCACCTATAGCACAGCGTGCCCAAGAAGTCCTAACCGCATGGAGAGTGCAAGCTGCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCGCACTCTCTCCTCCGTaGTCAGTGAGTCACTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TERGKQETGLGEPKAKASALSPP*SVSHCC Trigger: GCAGCAGTGACTCACTGACAACGGAGGAGAGAGTGC...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACTTAGCATGGCTGTGGTaGGTGTTCCCCAGCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LSVSHCCRGGNPAALLLYLAWLW*VFPSKI Trigger: AATCTTGCTGGGGAACACCAACCACAGCCATGCTAA...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCAGCCAACCTACAGTGTaGTTTATGGGAGTCACGATG | + |
|
Preference number: 3 (lower is better) Translates to: TERGKQETGLGEPKAKASSQPTV*FMGVTM Trigger: CATCGTGACTCCCATAAACAACACTGTAGGTTGGCT...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCCCAGTAACTTTATCATaGTCCTTATCCCAGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TERGKQETGLGEPKAKASPVTLS*SLSQAR Trigger: CCTTGCCTGGGATAAGGACAATGATAAAGTTACTGG...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CCA 72 bp | GCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATaGCTGTGGTTGGTGTTCCCCAGCAAGATTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: APQSQKQQKSLA*LWLVFPSKIYS Trigger: AGAGTAAATCTTGCTGGGGAACACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR TCA 72 bp | GTAAGGGCATCAACAGGGCAGTGTCAAACAACAGTGTaGGAAACCTTTGCAAATCCGATGCCAGATGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VRASTGQCQTTV*ETFANPMPDVD Trigger: ATCCACATCTGGCATCGGATTTGCAAAGGTTTCTCACACTGTTGTTTGACACTGCCCTGTTGATGCCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CCA 72 bp | CAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTaGTTGGTGTTCCCCAGCAAGATTTACTCTATGCGT | + |
|
Preference number: 3 (lower is better) Translates to: QSQKQQKSLAWL*LVFPSKIYSMR Trigger: ACGCATAGAGTAAATCTTGCTGGGGAACACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR TCA 72 bp | TCCCTGAGATTCAATGTTTTCTGCTGCTTAAATGGATaGTGTCTGGTAACTCAGCTAAGCAGCAGGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRFNVFCCLNG*CLVTQLSSRLW Trigger: CCACAGCCTGCTGCTTAGCTGAGTTACCAGACATCATCCATTTAAGCAGCAGAAAACATTGAATCTCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGCCCCGCCACCCTTCATTATTCAAACAGGGCTCGTTAAGTTTGGATCCAAACAAACATATCCTATaGATTTGGCAAAGGGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MLPRHPSLFKQGSLSLDPNKHIL*IWQRGH Trigger: ATGACCCCTTTGCCAAATCAATAGGATATGTTTGTT...TGGATCCAAACTTAACGAGCCCTGTTTGAATAATGAAGGGTGGCGGGGCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTATTCTGACATGCACATaGCACATCCCTAAAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: KSSSESETAEEFSMAVVGILTCT*HIPKNI Trigger: GATGTTTTTAGGGATGTGCAATGTGCATGTCAGAAT...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR TCA 72 bp | CTGTTTTCTCCAATGACCACCTCTGCAACGTTCATATaGAATCAATGTTTGCCTTCATGTCAGTGTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFSPMTTSATFI*NQCLPSCQCQD Trigger: GTCCTGACACTGACATGAAGGCAAACATTGATTTCATATGAACGTTGCAGAGGTGGTCATTGGAGAAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR GCA 72 bp | GTCATGTTGGAAACTGTTCCTTCCACTCCTTTAAAATaGGCACCCAGCTTTGTCAGCATTCATAATTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VMLETVPSTPLK*APSFVSIHNSD Trigger: GTCAGAATTATGAATGCTGACAAAGCTGGGTGCGCATTTTAAAGGAGTGGAAGGAACAGTTTCCAACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATGTGAAAAGCAACTATTCTTCAGGTCATGTCTACACAAACCAACCTGCACCACTAGCCTTTGCTaGATAGGCTGCCAAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: MSCEKQLFFRSCLHKPTCTTSLC*IGCQNK Trigger: TTTGTTTTGGCAGCCTATCAAGCAAAGGCTAGTGGT...GCAGGTTGGTTTGTGTAGACATGACCTGAAGAATAGTTGCTTTTCACATGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATGTGAAAAGCAACTATTCTTCAGGTCATGTCTACACAAACCAACCTGCGTTATCAGGGTCATGTaGGAAACTGTTCCTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: MSCEKQLFFRSCLHKPTCVIRVM*ETVPST Trigger: AGTGGAAGGAACAGTTTCCAACATGACCCTGATAAC...GCAGGTTGGTTTGTGTAGACATGACCTGAAGAATAGTTGCTTTTCACATGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCTCAGAGCCTAATCTCTaGTGTATATCTACAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFSEPNL*CISTGH Trigger: ATGTCCTGTAGATATACACAAGAGATTAGGCTCTGA...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCGTCACGATGGAGTTTTaGTCCTCAAAAATAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFVTMEF*SSKITT Trigger: AGTGGTTATTTTTGAGGACAAAAACTCCATCGTGAC...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR GCA 72 bp | GCGCACCCAGCTTTGTCAGCATTCATAATTCTGACATaGACATTGCACATCCCTAAAAACATCATAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: AHPALSAFIILT*TLHIPKNIINT Trigger: TGTGTTTATGATGTTTTTAGGGATGTGCAATGTGCATGTCAGAATTATGAATGCTGACAAAGCTGGGTGCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CCA 72 bp | AATTTTGTCGATATCTTCGGTGAACTCTTAACAATCTaGGAACTGTTTTCTCCAATGACCACCTCTGCAACG | + |
|
Preference number: 3 (lower is better) Translates to: NFVDIFGELLTI*ELFSPMTTSAT Trigger: CGTTGCAGAGGTGGTCATTGGAGAAAACAGTTCCCAGATTGTTAAGAGTTCACCGAAGATATCGACAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATGGGAAGATCAAATTCTACTGGGGAGTCACATCACTACACAGTCCAACAAACAAACATATCCTATaGATTTGGCAAAGGGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LNGKIKFYWGVTSLHSPTNKHIL*IWQRGH Trigger: ATGACCCCTTTGCCAAATCAATAGGATATGTTTGTT...TGTTGGACTGTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTTCCCATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCCTTTGCTCCTCTACATaGGTACCATTCTTTATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFLCSST*VPFFIV Trigger: AACAATAAAGAATGGTACCAATGTAGAGGAGCAAAG...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR TCA 72 bp | GCTCCTCTACATTGGTACCATTCTTTATTGTTTCTATaGATGATGTCTAGATGTTGTGGCTTACCCTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: APLHWYHSLLFL*MMSRCCGLPLN Trigger: GTTTAAGGGTAAGCCACAACATCTAGACATCATTCATAGAAACAATAAAGAATGGTACCAATGTAGAGGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR TCA 72 bp | TGTGTAATCCCCATTACACAGATGGAGCAAAGATTCTaGATTGCAGTCTTATTATCTAACACCCTTAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CVIPITQMEQRF*IAVLLSNTLKD Trigger: ATCTTTAAGGGTGTTAGATAATAAGACTGCAATTCAGAATCTTTGCTCCATCTGTGTAATGGGGATTACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CAA 72 bp | CAGCAGGCTGTGGCATTCTCCCAAGTAAGGACAGCTTaGTTACAGAGCACTCTCTCCTCCGTTGTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQAVAFSQVRTA*LQSTLSSVVSE Trigger: CTCACTGACAACGGAGGAGAGAGTGCTCTGTAACAAAGCTGTCCTTACTTGGGAGAATGCCACAGCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| CDS-3UTR TCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACGTAACTGGACTCCTATaGCCACTCAATGCGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSHCCRGGNPAALLLYVTGLL*PLNAYF Trigger: GAAATACGCATTGAGTGGTCATAGGAGTCCAGTTAC...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACTGCGTATTTCTCAGGTaGACGGGGAATCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSHCCRGGNPAALLLYCVFLR*TGNPFF Trigger: AAAGAATGGATTCCCCGTCCACCTGAGAAATACGCA...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CAA 72 bp | CAACAGGGCAGTGTCAAACAACAGTGTGAGAAACCTTaGCAAATCCGATGCCAGATGTGGATGTTGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QQGSVKQQCEKP*QIRCQMWMLPR Trigger: GCGGGGCAACATCCACATCTGGCATCGGATTTGCAAAGGTTTCTCACACTGTTGTTTGACACTGCCCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| 3UTR CAA 72 bp | ATACTAGTGATTGTGGGTAGTGCTCTGAGCACACCATaGGTCACACCACATGCAGACAGAACAGGACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILVIVGSALSTP*VTPHADRTGRS Trigger: AGACCGTCCTGTTCTGTCTGCATGTGGTGTGACCAATGGTGTGCTCAGAGCACTACCCACAATCACTAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTATCAGAGTGCCATCCTaGTTTGGCCGCACCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSSESETAEEFSMAVVGIRVPS*FGRTIR Trigger: ACGTATGGTGCGGCCAAATCAGGATGGCACTCTGAT...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGGAAGATCAAATTCTACTGGGGAGTCACATCACTACACAGTCCAACAAGTGCCATCCTGATTTaGCCGCACCATACGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGKIKFYWGVTSLHSPTSAILI*PHHTYP Trigger: TGGGTACGTATGGTGCGGCCAAATCAGGATGGCACT...TGTTGGACTGTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTTCCCATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CCA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCAGTGCCATCCTGATTTaGCCGCACCATACGTACCCA | + |
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Preference number: 4 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFSAILI*PHHTYP Trigger: TGGGTACGTATGGTGCGGCCAAATCAGGATGGCACT...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTAGGCATGATGGCTACTaGAGAGACATTGTGATCGTG | + |
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Preference number: 4 (lower is better) Translates to: KSSSESETAEEFSMAVVGRHDGY*RDIVIV Trigger: CACGATCACAATGTCTCTTCAGTAGCCATCATGCCT...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTCGTACCCAGTTATCATaGCCCACAAGAGTCATAAGG | + |
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Preference number: 4 (lower is better) Translates to: KSSSESETAEEFSMAVVGRTQLS*PTRVIR Trigger: CCTTATGACTCTTGTGGGTCATGATAACTGGGTACG...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR GCA 90 bp | AAAAGCTCCTCAGAGTCAGAAACAGCAGAAGAGTTTAGCATGGCTGTGGTTGGTCTTGCATTCCTTTGTTaGTACAACCCACACACGCAC | + |
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Preference number: 4 (lower is better) Translates to: KSSSESETAEEFSMAVVGLAFLC*YNPHTH Trigger: GTGCGTGTGTGGGTTGTAGCAACAAAGGAATGCAAG...ACCAACCACAGCCATGCTAAACTCTTCTGCTGTTTCTGACTCTGAGGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | CTCAATGGGAAGATCAAATTCTACTGGGGAGTCACATCACTACACAGTCCAACAAGGCATGATGGCTACTaGAGAGACATTGTGATCGTG | + |
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Preference number: 4 (lower is better) Translates to: LNGKIKFYWGVTSLHSPTRHDGY*RDIVIV Trigger: CACGATCACAATGTCTCTTCAGTAGCCATCATGCCT...TGTTGGACTGTGTAGTGATGTGACTCCCCAGTAGAATTTGATCTTCCCATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR CAA 72 bp | GTGAGGCAATGTTGTCCTAAAAGCCAACCTACAGTGTaGTTTATGGGAGTCACGATGGAGTTTTTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VRQCCPKSQPTV*FMGVTMEFLSS Trigger: TGAGGACAAAAACTCCATCGTGACTCCCATAAACAACACTGTAGGTTGGCTTTTAGGACAACATTGCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | ATGTCATGTGAAAAGCAACTATTCTTCAGGTCATGTCTACACAAACCAACCTGCCGTACCCAGTTATCATaGCCCACAAGAGTCATAAGG | + |
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Preference number: 4 (lower is better) Translates to: MSCEKQLFFRSCLHKPTCRTQLS*PTRVIR Trigger: CCTTATGACTCTTGTGGGTCATGATAACTGGGTACG...GCAGGTTGGTTTGTGTAGACATGACCTGAAGAATAGTTGCTTTTCACATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAATGTACAGAGTCTGTATaGCCCTTGAGAGTTCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FAPSRLINTLGLYTAGQECTESV*PLRVRS Trigger: TGAGCGAACTCTCAAGGGCCATACAGACTCTGTACA...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | TTTGCACCATCTAGATTAATCAACACACTGGGTTTATATACAGCTGGACAGGAACACACCTTTACTGTTTaGTCTACACTGCCAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: FAPSRLINTLGLYTAGQEHTFTV*STLPVT Trigger: GGTTACTGGCAGTGTAGATCAAACAGTAAAGGTGTG...TTCCTGTCCAGCTGTATATAAACCCAGTGTGTTGATTAATCTAGATGGTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | TCCCCATTACACAGATGGAGCAAAGATTCTGAATTGCAGTCTTATTATCTAACACACACCTTTACTGTTTaGTCTACACTGCCAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: SPLHRWSKDSELQSYYLTHTFTV*STLPVT Trigger: GGTTACTGGCAGTGTAGATCAAACAGTAAAGGTGTG...TGTTAGATAATAAGACTGCAATTCAGAATCTTTGCTCCATCTGTGTAATGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR GCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATCCTATGACCACTCAATaGGTATTTCTCAGGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: VYTHNQQPSEYTILSAFYPMTTQ*VFLRWT Trigger: CGTCCACCTGAGAAATACGCATTGAGTGGTCATAGG...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR GCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATCTTGCATTCCTTTGTTaGTACAACCCACACACGCAC | + |
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Preference number: 4 (lower is better) Translates to: VYTHNQQPSEYTILSAFYLAFLC*YNPHTH Trigger: GTGCGTGTGTGGGTTGTAGCAACAAAGGAATGCAAG...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CCA 90 bp | TCCCCATTACACAGATGGAGCAAAGATTCTGAATTGCAGTCTTATTATCTAACATGCGTATTTCTCAGGTaGACGGGGAATCCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SPLHRWSKDSELQSYYLTCVFLR*TGNPFF Trigger: AAAGAATGGATTCCCCGTCCACCTGAGAAATACGCA...TGTTAGATAATAAGACTGCAATTCAGAATCTTTGCTCCATCTGTGTAATGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR TCA 90 bp | GTTTACACACACAATCAACAACCATCCGAGTACACAATTCTATCAGCTTTTTATGTAACTGGACTCCTATaGCCACTCAATGCGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: VYTHNQQPSEYTILSAFYVTGLL*PLNAYF Trigger: GAAATACGCATTGAGTGGTCATAGGAGTCCAGTTAC...ATAAAAAGCTGATAGAATTGTGTACTCGGATGGTTGTTGATTGTGTGTGTAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| 3UTR CAA 72 bp | TCTTGTGTATATCTACAGGACATTAATTCTCACCCTTaGTCCTTTCAGGAACCAAATTTCCATTCAATACTT | + |
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Preference number: 4 (lower is better) Translates to: SCVYLQDINSHP*SFQEPNFHSIL Trigger: AAGTATTGAATGGAAATTTGGTTCCTGAAAGGACAAAGGGTGAGAATTAATGTCCTGTAGATATACACAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CAA 90 bp | TTGTCAGTGAGTCACTGCTGCAGGGGAGGAAACCCAGCAGCTTTGCTCCTCTACGAGTCTGTATGGCCCTaGAGAGTTCGCTCAAAATCT | + |
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Preference number: 5 (lower is better) Translates to: LSVSHCCRGGNPAALLLYESVWP*RVRSKS Trigger: AGATTTTGAGCGAACTCTCAAGGGCCATACAGACTC...GTAGAGGAGCAAAGCTGCTGGGTTTCCTCCCCTGCAGCAGTGACTCACTGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CAA 90 bp | ATGTTGCCCCGCCACCCTTCATTATTCAAACAGGGCTCGTTAAGTTTGGATCCAGAGTGCCATCCTGATTaGGCCGCACCATACGTACCC | + |
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Preference number: 5 (lower is better) Translates to: MLPRHPSLFKQGSLSLDPECHPD*AAPYVP Trigger: GGGTACGTATGGTGCGGCCAAATCAGGATGGCACTC...TGGATCCAAACTTAACGAGCCCTGTTTGAATAATGAAGGGTGGCGGGGCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CAA 90 bp | ACAGAAAGAGGCAAACAGGAGACTGGGCTTGGTGAGCCTAAAGCCAAAGCTTCCGAGTCTGTATGGCCCTaGAGAGTTCGCTCAAAATCT | + |
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Preference number: 5 (lower is better) Translates to: TERGKQETGLGEPKAKASESVWP*RVRSKS Trigger: AGATTTTGAGCGAACTCTCAAGGGCCATACAGACTC...GGAAGCTTTGGCTTTAGGCTCACCAAGCCCAGTCTCCTGTTTGCCTCTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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| CDS-3UTR CAA 90 bp | CCTTCATGTCAGTGTCAGGACCGGCTTCTAACTCGTAGAGTTTGTGTTTATTTCGAGTGCCATCCTGATTaGGCCGCACCATACGTACCC | + |
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Preference number: 5 (lower is better) Translates to: PSCQCQDRLLTRRVCVYFECHPD*AAPYVP Trigger: GGGTACGTATGGTGCGGCCAAATCAGGATGGCACTC...GAAATAAACACAAACTCTACGAGTTAGAAGCCGGTCCTGACACTGACATGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021091.15 ENSMUST00000102520.9 |
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