Pregenerated sensors for PAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003437Ensembl transcript IDs: ENSMUST00000003529.9
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATGACTCCTGCTCTGGCTaGGGCTCCTCTGGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADDSCSG*GSSGHH Trigger: GTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTC...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATTCTTCCCTCTGGGCCTaGGTCTGGATGGTGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADSSLWA*VWMVGA Trigger: GGCGCCCACCATCCAGACCCAGGCCCAGAGGGAAGA...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTATGGCTGCGGCTCCTCTaGCCACCACCATCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLWLRLL*PPPSLP Trigger: CGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCA...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGCATTGGTACCTGACTaGACCCCAGCCTTGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLALVPD*TPALAR Trigger: CCGGGCCAAGGCTGGGGTTCAGTCAGGTACCAATGC...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCAGCCATCTTCCTGAGCTaGGTGCTCACTGCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISAIFLS*VLTATG Trigger: CCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGC...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCCTGCCCCTGTGGGCCTaGCCTCTGTCCTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLILPLWA*PLSSSS Trigger: TGATGATGAGGACAGAGGGCAGGCCCACAGGGGCAG...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAGAGCTGAGTGCTCACTaGCACTGGGGAAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEELSAH*HWGRGW Trigger: CCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTC...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATGGGAATTGGGCCTGTaGCCATCTTCCCTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISWELGL*PSSLWA Trigger: GGCCCAGAGGGAAGATGGCCACAGGCCCAATTCCCA...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATAGTGCTCACTGCCACTaGGGAAGGGGCTGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADSAHCH*GRGWHS Trigger: GGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACT...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCACTGGGAAGACAGGCATaGCCTCCACTGGTGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISLGRQA*PPLVSL Trigger: GAGTGACACCAGTGGAGGTCATGCCTGTCTTCCCAG...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCCAAGGCATTGGTACCTaGCTGAACCCCAGCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIQGIGT*LNPSLG Trigger: GCCAAGGCTGGGGTTCAGTCAGGTACCAATGCCTTG...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAATGGCCATCTTCCCTCTaGGCCTGGGTCTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEWPSSL*AWVWMV Trigger: CACCATCCAGACCCAGGCCCAGAGGGAAGATGGCCA...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAATCAGGCAAGGTCCGGTaGGAATTGGGCCTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLESGKVR*ELGLWP Trigger: TGGCCACAGGCCCAATTCCCACCGGACCTTGCCTGA...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCAGGCATGACCTCCACTaGTGTCACTCGGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIRHDLH*CHSGLA Trigger: AGCAAGCCCCGAGTGACACCAGTGGAGGTCATGCCT...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGAGCTGGTGGGAGCCTaGATCTCCTCTTCTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIELVGA*ISSSRS Trigger: GCTTCTAGAAGAGGAGATTCAGGCTCCCACCAGCTC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAGGTGACCCCCAGATCTaGCTCAGTCAGGAGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEGDPQI*LSQEVM Trigger: CATGACCTCCTGACTGAGCCAGATCTGGGGGTCACC...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAACTGAACCCCAGCCTTaGCCCGGCGCTTACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLTEPQP*PGAYLD Trigger: GTCTAAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGT...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCGTGGTTTTCCAACTaGGCCTTTCGTGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLISWFSN*AFRASW Trigger: CCAGGAGGCACGAAAGGCCCAGTTGGAAAACCACGA...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTTGGGGGCTGGGTCTaGGTCAAAAATGACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADLGGWV*VKNDLS Trigger: GCTCAGGTCATTTTTGACTCAGACCCAGCCCCCAAG...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAATCACTGCCATCTTCCTaGGCTGAGTGCTCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLESLPSS*AECSLP Trigger: TGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGA...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGCCACTCTTGTCACTTaGCTCATCTCTGTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIATLVT*LISVTL Trigger: GAGGGTGACAGAGATGAGGCAAGTGACAAGAGTGGC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTACACCACTTGTGTCCTTaGGGGCTGGGTCTGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLHHLCP*GLGLSQ Trigger: TTGACTCAGACCCAGCCCCCAAGGACACAAGTGGTG...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAGGCTATTGCAGTACTTaGCTCGGCAGACTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEGYCST*LGRLLQ Trigger: CTGGAGTAGTCTGCCGAGTCAAGTACTGCAATAGCC...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAACATCCATCATGCCCCTaGTCATGGCCTGAGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEHPSCP*SWPETS Trigger: TGATGTCTCAGGCCATGATCAGGGGCATGATGGATG...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGGTACCACCTTTGCATaGTGCTGGGATCTCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIGTTFA*CWDLLE Trigger: CTCTAAGAGATCCCAGCAGCATGCAAAGGTGGTACC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAAGGCTGCTGCTTCACTaGCATCTTCCTGAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLERLLLH*HLPELS Trigger: ACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAGCCT...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCACTGGAATCAGAGGCTaGTGCTTCACTGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLITGIRG*CFTAIF Trigger: GAAGATGGCAGTGAAGCAGCAGCCTCTGATTCCAGT...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCACCTTTGCATGCTGCTaGGATCTCTTAGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLITFACC*DLLELV Trigger: CACCAGCTCTAAGAGATCCCAGCAGCATGCAAAGGT...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAACGACAAGCAAGGCATTaGTACCTGACTGAACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLERQARH*YLTEPQ Trigger: CTGGGGTTCAGTCAGGTACCAATGCCTTGCTTGTCG...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGCCTTTCGTGCCTCCTaGGCTTCTAATTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIAFRAS*ASNSFS Trigger: TGAGAAGGAATTAGAAGCCCAGGAGGCACGAAAGGC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCACTCCTCCTCTTCCTCTaGTTCGTGGTTTTCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISLLLFL*FVVFQL Trigger: CAGTTGGAAAACCACGAACCAGAGGAAGAGGAGGAG...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTACACTGTCAGCCTCACTaGAATCAGAGGCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLHCQPH*NQRLLL Trigger: AAGCAGCAGCCTCTGATTCCAGTGAGGCTGACAGTG...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCACAGAAACCCCAATCTTaGCTTCAGGCTTCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISQKPQS*LQASHW Trigger: CCAATGAGAAGCCTGAAGTCAAGATTGGGGTTTCTG...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCCCCTGATCATGGCCTaGGACATCATCTCTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADPLIMA*DIISNA Trigger: TGCATTAGAGATGATGTCTCAGGCCATGATCAGGGG...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATACCACCTTTGCATGCTaGTGGGATCTCTTAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADTTFAC*WDLLEL Trigger: CAGCTCTAAGAGATCCCAGCAGCATGCAAAGGTGGT...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAATTTCATCCTCACCGCTaGCACTCTTGTCACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEFHPHR*HSCHLP Trigger: AGGCAAGTGACAAGAGTGGCAGCGGTGAGGATGAAA...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCACCTCATAGCCCTTACTaGCCTTGTTCTTCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISPHSPY*PCSSHS Trigger: GGAATGTGAAGAACAAGGCCAGTAAGGGCTATGAGG...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGAGTCAAAAATGACCTaGGCACATGGGTTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIESKMT*AHGFIH Trigger: GTGGATAAACCCATGTGCTCAGGTCATTTTTGACTC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCGGTCTGAGTCAAAAATaGCCTGAGCACATGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIGLSQK*PEHMGL Trigger: TAAACCCATGTGCTCAGGTCATTTTTGACTCAGACC...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCAGGAGGTCATGTTTGTaGTGTTTCTCCAAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIRRSCL*CFSKEV Trigger: AACCTCCTTGGAGAAACAGCACAAACATGACCTCCT...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCCCACATCTTAAAATCTaGGAAGACAGGCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQLEKCFPALKMVSVLIPHLKI*EDRHDL Trigger: GAGGTCATGCCTGTCTTCCCAGATTTTAAGATGTGG...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTATCTTTTCAATGGCTGTaGTTTGGCTGTCCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLSFQWL*FGCPCL Trigger: AAGACAGGGACAGCCAAATCACAGCCATTGAAAAGA...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATTCTTCCTCTGTGAACTaGTGTTTCACAGAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADSSSVN*CFTETP Trigger: TGGGGTTTCTGTGAAACAGCAGTTCACAGAGGAAGA...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCAGTCATACACATCATCTaGTGCATAGTCCATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISVIHII*CIVHLF Trigger: GAAGAGATGGACTATGCACCAGATGATGTGTATGAC...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTTCTCCAAGGAGGTTaGTTTGTACTGAACAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQLEKCFPALKMVSVLISFLQGG*FVLNKP Trigger: AGGTTTGTTCAGTACAAAGCAACCTCCTTGGAGAAA...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAATACACATCATCTGGTaGATAGTCCATCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLEIHIIW*IVHLFL Trigger: GAGGAAGAGATGGACTATGCACCAGATGATGTGTAT...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATAGATGCCATATCTGTTaGACTCAGTGGAGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: KQTTRKVLPCPKNGVCADRCHIC*TQWRYT Trigger: AGTATATCTCCACTGAGTTCAACAGATATGGCATCT...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTATGGGAGATCGATTTCTaGGCATCTTCAAAAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLEKCFPALKMVSVLISLWEIDF*ASSKVF Trigger: AAAGACTTTTGAAGATGCCCAGAAATCGATCTCCCA...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAAATGACCTGAGCACATaGGTTTATCCACATCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKCFPALKMVSVLISLENDLST*VYPHLK Trigger: TTTAAGATGTGGATAAACCCATGTGCTCAGGTCATT...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | GCTCACTGCCACTGGGGAAGGGGCTGGCACTCCGGCTACGACTCCTaGTCTGGCTGCGGCTCCTCTGGCCACCACCATCACTGCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHCHWGRGWHSGYDS*SGCGSSGHHHHCRC Trigger: ACAGCGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | TACGACTCCTGCTCTGGCTGCGGCTCCTCTGGCCACCACCATCACTaGCGCTGTCCGAGTCATTGTCACTGCCCCTGTGGGCCTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YDSCSGCGSSGHHHH*RCPSHCHCPCGPAL Trigger: GAGGGCAGGCCCACAGGGGCAGTGACAATGACTCGGACAGCGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 90 bp | TGCCATCTTCCTGAGCTGAGTGCTCACTGCCACTGGGGAAGGGGCTaGCACTCCGGCTACGACTCCTGCTCTGGCTGCGGCTCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CHLPELSAHCHWGRG*HSGYDSCSGCGSSG Trigger: GCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 90 bp | CTGCTGCTTCACTGCCATCTTCCTGAGCTGAGTGCTCACTGCCACTaGGGAAGGGGCTGGCACTCCGGCTACGACTCCTGCTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLHCHLPELSAHCH*GRGWHSGYDSCSGC Trigger: GCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | CAGAGGCTGCTGCTTCACTGCCATCTTCCTGAGCTGAGTGCTCACTaGCACTGGGGAAGGGGCTGGCACTCCGGCTACGACTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRLLLHCHLPELSAH*HWGRGWHSGYDSCS Trigger: AGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 90 bp | CTCACTGGAATCAGAGGCTGCTGCTTCACTGCCATCTTCCTGAGCTaGGTGCTCACTGCCACTGGGGAAGGGGCTGGCACTCCGGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: LTGIRGCCFTAIFLS*VLTATGEGAGTPAT Trigger: CGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAGCCTCTGATTCCAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 90 bp | TCAGCCTCACTGGAATCAGAGGCTGCTGCTTCACTGCCATCTTCCTaGGCTGAGTGCTCACTGCCACTGGGGAAGGGGCTGGCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SASLESEAAASLPSS*AECSLPLGKGLALR Trigger: CCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAGCCTCTGATTCCAGTGAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | CACTGTCACTGTCAGCCTCACTGGAATCAGAGGCTGCTGCTTCACTaGCATCTTCCTGAGCTGAGTGCTCACTGCCACTGGGGAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HCHCQPHWNQRLLLH*HLPELSAHCHWGRG Trigger: GCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTGAAGCAGCAGCCTCTGATTCCAGTGAGGCTGACAGTGACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | CCCGGGCAGCACGTGCTTCATCCTCACTGCTTTCATCCTCACCGCTaGCACTCTTGTCACTTGCCTCATCTCTGTCACCCTCTTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGQHVLHPHCFHPHR*HSCHLPHLCHPLLG Trigger: ACCGAGAAGAGGGTGACAGAGATGAGGCAAGTGACAAGAGTGGCAGCGGTGAGGATGAAAGCAGTGAGGATGAAGCACGTGCTGCCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 90 bp | TTCATGTCACGGTGTTTGACGACAAGCAAGGCATTGGTACCTGACTaGACCCCAGCCTTGGCCCGGCGCTTACTTAGACGGACCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FMSRCLTTSKALVPD*TPALARRLLRRTLV Trigger: GACCAGGGTCCGTCTAAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGTACCAATGCCTTGCTTGTCGTCAAACACCGTGACATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 90 bp | CCATCACTGCCGCTGTCCGAGTCATTGTCACTGCCCCTGTGGGCCTaGCCTCTGTCCTCATCATCAGAGTCAGCATCATCTTCTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLPLSESLSLPLWA*PLSSSSESASSSES Trigger: TGATTCAGAAGATGATGCTGACTCTGATGATGAGGACAGAGGGCAGGCCCACAGGGGCAGTGACAATGACTCGGACAGCGGCAGTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 90 bp | GCGGTAGGTGTCAGGGTTGATGAGATCAATGGTGACCCCCAGATCTaGCTCAGTCAGGAGGTCATGTTTGTGCTGTTTCTCCAAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVGVRVDEINGDPQI*LSQEVMFVLFLQGG Trigger: ACCTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGATCTGGGGGTCACCATTGATCTCATCAACCCTGACACCTACCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 90 bp | ACCACCTTTGCATGCTGCTGGGATCTCTTAGAGCTGGTGGGAGCCTaGATCTCCTCTTCTAGAAGCTTCTCATCAGCCGGATCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTFACCWDLLELVGA*ISSSRSFSSAGSRR Trigger: TCTTCTGGATCCGGCTGATGAGAAGCTTCTAGAAGAGGAGATTCAGGCTCCCACCAGCTCTAAGAGATCCCAGCAGCATGCAAAGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 90 bp | GTGCCTCCTGGGCTTCTAATTCCTTCTCATTCATGTCACGGTGTTTaGCGACAAGCAAGGCATTGGTACCTGACTGAACCCCAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPGLLIPSHSCHGV*RQARHWYLTEPQPW Trigger: CCAAGGCTGGGGTTCAGTCAGGTACCAATGCCTTGCTTGTCGTCAAACACCGTGACATGAATGAGAAGGAATTAGAAGCCCAGGAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 90 bp | AAACCTGTTCTGGTCGAAGGGGTAGGTGATGAACTTGGGGTCAAATaGGATGTCAGGAAGGCTATTGCAGTACTTGACTCGGCAGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: KPVLVEGVGDELGVK*DVRKAIAVLDSADY Trigger: GTAGTCTGCCGAGTCAAGTACTGCAATAGCCTTCCTGACATCCCATTTGACCCCAAGTTCATCACCTACCCCTTCGACCAGAACAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAAAGGTCCGGTGGGAATaGGGCCTGTGGCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEKCFPALKMVSVLISLEKVRWE*GLWPSS Trigger: GGAAGATGGCCACAGGCCCAATTCCCACCGGACCTT...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | CAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGCACCACTTGTGTCCTaGGGGGCTGGGTCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLEKCFPALKMVSVLISLAPLVS*GAGSES Trigger: TGACTCAGACCCAGCCCCCAAGGACACAAGTGGTGC...TAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 90 bp | GTTTATCCACATCTTAAAATCTGGGAAGACAGGCATGACCTCCACTaGTGTCACTCGGGGCTTGCTGTAATGCTGGGAGATCGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYPHLKIWEDRHDLH*CHSGLAVMLGDRFL Trigger: CAGAAATCGATCTCCCAGCATTACAGCAAGCCCCGAGTGACACCAGTGGAGGTCATGCCTGTCTTCCCAGATTTTAAGATGTGGATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATTCCACGGTACCACCTTaGCATGCTGCTGGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQTTRKVLPCPKNGVCADSTVPP*HAAGIS Trigger: AGAGATCCCAGCAGCATGCAAAGGTGGTACCGTGGA...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCCAAAAATCTCCTCTTaGTCCCGGGCAGCACGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQTTRKVLPCPKNGVCADPKISS*SRAARA Trigger: AGCACGTGCTGCCCGGGACAAAGAGGAGATTTTTGG...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCAGGCTATTGCAGTACTaGACTCGGCAGACTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NRQLEKCFPALKMVSVLIRLLQY*TRQTTP Trigger: TGGAGTAGTCTGCCGAGTCAAGTACTGCAATAGCCT...GATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCAGTCAGGAGGTCATGTTaGTGCTGTTTCTCCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLEKCFPALKMVSVLISVRRSC*CCFSKE Trigger: CTCCTTGGAGAAACAGCACAAACATGACCTCCTGAC...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATATGTCAGGAAGGCTATaGCAGTACTTGACTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQTTRKVLPCPKNGVCADMSGRL*QYLTRQ Trigger: CTGCCGAGTCAAGTACTGCAATAGCCTTCCTGACAT...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATGGCTGTCCCTGTCTTaGTATATTTCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQLEKCFPALKMVSVLISWLSLS*YISSSV Trigger: CACAGAGGAAGAAATATACAAAGACAGGGACAGCCA...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCATTAGAAGTTTCTCCAAGGAGGTaGCTTTGTACTGAACAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LEKCFPALKMVSVLISLEVSPRR*LCTEQT Trigger: GGTTTGTTCAGTACAAAGCAACCTCCTTGGAGAAAC...TTCTAATGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATCTCAGAGATGCCATATCTGTaGAACTCAGTGGAGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: RQLEKCFPALKMVSVLISEMPYL*NSVEIY Trigger: GTATATCTCCACTGAGTTCAACAGATATGGCATCTC...TGAGATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAACTAGAAAAGTGCTTCCCTGCCCTAAAAATGGTGTCTGTGCTGATTTCTTCACATTCCAGTaGTATTCCCGAGCAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KQTTRKVLPCPKNGVCADFFTFQ*YSRAIL Trigger: TAAGATTGCTCGGGAATACAACTGGAATGTGAAGAA...ATCAGCACAGACACCATTTTTAGGGCAGGGAAGCACTTTTCTAGTTGTCTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | GGGAAGGGGCTGGCACTCCGGCTACGACTCCTGCTCTaGCTGCGGCTCCTCTGGCCACCACCATCACTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GKGLALRLRLLL*LRLLWPPPSLP Trigger: CGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | AGGGGCTGGCACTCCGGCTACGACTCCTGCTCTGGCTaGGGCTCCTCTGGCCACCACCATCACTGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGWHSGYDSCSG*GSSGHHHHCRC Trigger: ACAGCGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | CACTGGGGAAGGGGCTGGCACTCCGGCTACGACTCCTaGTCTGGCTGCGGCTCCTCTGGCCACCACCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: HWGRGWHSGYDS*SGCGSSGHHHH Trigger: GTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | CCTGAGCTGAGTGCTCACTGCCACTGGGGAAGGGGCTaGCACTCCGGCTACGACTCCTGCTCTGGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PELSAHCHWGRG*HSGYDSCSGCG Trigger: GCCGCAGCCAGAGCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | TGCTCTGGCTGCGGCTCCTCTGGCCACCACCATCACTaGCGCTGTCCGAGTCATTGTCACTGCCCCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSGCGSSGHHHH*RCPSHCHCPCG Trigger: CCCACAGGGGCAGTGACAATGACTCGGACAGCGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCAGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | CACTGCCATCTTCCTGAGCTGAGTGCTCACTGCCACTaGGGAAGGGGCTGGCACTCCGGCTACGACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HCHLPELSAHCH*GRGWHSGYDSC Trigger: GCAGGAGTCGTAGCCGGAGTGCCAGCCCCTTCCCCAGTGGCAGTGAGCACTCAGCTCAGGAAGATGGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | CACCACCATCACTGCCGCTGTCCGAGTCATTGTCACTaGCCCTGTGGGCCTGCCCTCTGTCCTCATCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: HHHHCRCPSHCH*PCGPALCPHHQ Trigger: CTGATGATGAGGACAGAGGGCAGGCCCACAGGGGCAGTGACAATGACTCGGACAGCGGCAGTGATGGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | CAAGCAAGGCATTGGTACCTGACTGAACCCCAGCCTTaGCCCGGCGCTTACTTAGACGGACCCTGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QARHWYLTEPQP*PGAYLDGPWSP Trigger: TGGAGACCAGGGTCCGTCTAAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGTACCAATGCCTTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 72 bp | CGGTGTTTGACGACAAGCAAGGCATTGGTACCTGACTaGACCCCAGCCTTGGCCCGGCGCTTACTTAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: RCLTTSKALVPD*TPALARRLLRR Trigger: CCGTCTAAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGTACCAATGCCTTGCTTGTCGTCAAACACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 90 bp | GCACGTGCTTCATCCTCACTGCTTTCATCCTCACCGCTGCCACTCTaGTCACTTGCCTCATCTCTGTCACCCTCTTCTCGGTCACTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ARASSSLLSSSPLPL*SLASSLSPSSRSLS Trigger: TGAGAGTGACCGAGAAGAGGGTGACAGAGATGAGGCAAGTGACAAGAGTGGCAGCGGTGAGGATGAAAGCAGTGAGGATGAAGCACGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 72 bp | GCATGCTGCTGGGATCTCTTAGAGCTGGTGGGAGCCTaGATCTCCTCTTCTAGAAGCTTCTCATCAGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACCWDLLELVGA*ISSSRSFSSAG Trigger: TCCGGCTGATGAGAAGCTTCTAGAAGAGGAGATTCAGGCTCCCACCAGCTCTAAGAGATCCCAGCAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | TTCCAGAGTGTTCATCCTCGCTGCCTTCTTTCTCACTaGTGCTACCCTTCTCCTGTTCCTCATCTGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FQSVHPRCLLSH*CYPSPVPHLSP Trigger: GGGGCTCAGATGAGGAACAGGAGAAGGGTAGCAGCAGTGAGAAAGAAGGCAGCGAGGATGAACACTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | TCCTCCTCCTCTTCCTCTGGTTCGTGGTTTTCCAACTaGGCCTTTCGTGCCTCCTGGGCTTCTAATTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSGSWFSN*AFRASWASNSF Trigger: GAAGGAATTAGAAGCCCAGGAGGCACGAAAGGCCCAGTTGGAAAACCACGAACCAGAGGAAGAGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 90 bp | ATGAACTTGGGGTCAAATGGGATGTCAGGAAGGCTATTGCAGTACTaGACTCGGCAGACTACTCCAGACCTCTCAGGCAAGGTCCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MNLGSNGMSGRLLQY*TRQTTPDLSGKVRW Trigger: CCACCGGACCTTGCCTGAGAGGTCTGGAGTAGTCTGCCGAGTCAAGTACTGCAATAGCCTTCCTGACATCCCATTTGACCCCAAGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 72 bp | GGTCAAATGGGATGTCAGGAAGGCTATTGCAGTACTTaGCTCGGCAGACTACTCCAGACCTCTCAGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQMGCQEGYCST*LGRLLQTSQAR Trigger: CCTTGCCTGAGAGGTCTGGAGTAGTCTGCCGAGTCAAGTACTGCAATAGCCTTCCTGACATCCCATTTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | GATATACTCTGTCTTACGCATCCACGGTACCACCTTTaGATGCTGCTGGGATCTCTTAGAGCTGGTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DILCLTHPRYHL*MLLGSLRAGGS Trigger: GCTCCCACCAGCTCTAAGAGATCCCAGCAGCATGCAAAGGTGGTACCGTGGATGCGTAAGACAGAGTATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 72 bp | GGGTCAAATGGGATGTCAGGAAGGCTATTGCAGTACTaGACTCGGCAGACTACTCCAGACCTCTCAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSNGMSGRLLQY*TRQTTPDLSGK Trigger: CTTGCCTGAGAGGTCTGGAGTAGTCTGCCGAGTCAAGTACTGCAATAGCCTTCCTGACATCCCATTTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | GTCAGGGTTGATGAGATCAATGGTGACCCCCAGATCTaGCTCAGTCAGGAGGTCATGTTTGTGCTGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VRVDEINGDPQI*LSQEVMFVLFL Trigger: GAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGATCTGGGGGTCACCATTGATCTCATCAACCCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CCA 72 bp | CATCTTAAAATCTGGGAAGACAGGCATGACCTCCACTaGTGTCACTCGGGGCTTGCTGTAATGCTGGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLKIWEDRHDLH*CHSGLAVMLGD Trigger: ATCTCCCAGCATTACAGCAAGCCCCGAGTGACACCAGTGGAGGTCATGCCTGTCTTCCCAGATTTTAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 72 bp | GGGCTTCTAATTCCTTCTCATTCATGTCACGGTGTTTaGCGACAAGCAAGGCATTGGTACCTGACTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLIPSHSCHGV*RQARHWYLTEP Trigger: GGGTTCAGTCAGGTACCAATGCCTTGCTTGTCGTCAAACACCGTGACATGAATGAGAAGGAATTAGAAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS GCA 72 bp | CAGGAGGTCATGTTTGTGCTGTTTCTCCAAGGAGGTTaGTTTGTACTGAACAAACCTGTTCTGGTCGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QEVMFVLFLQGG*FVLNKPVLVEG Trigger: CCCTTCGACCAGAACAGGTTTGTTCAGTACAAAGCAACCTCCTTGGAGAAACAGCACAAACATGACCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 90 bp | TCAGCATCATCTTCTGAATCAGCATCACTACCAAAAATCTCCTCTTaGTCCCGGGCAGCACGTGCTTCATCCTCACTGCTTTCATCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SASSSESASLPKISS*SRAARASSSLLSSS Trigger: TGAGGATGAAAGCAGTGAGGATGAAGCACGTGCTGCCCGGGACAAAGAGGAGATTTTTGGTAGTGATGCTGATTCAGAAGATGATGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 90 bp | ACCCCAATCTTGACTTCAGGCTTCTCATTGGAGATGCCATATCTGTaGAACTCAGTGGAGATATACTCTGTCTTACGCATCCACGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: TPILTSGFSLEMPYL*NSVEIYSVLRIHGT Trigger: GGTACCGTGGATGCGTAAGACAGAGTATATCTCCACTGAGTTCAACAGATATGGCATCTCCAATGAGAAGCCTGAAGTCAAGATTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS CAA 72 bp | TCAGGAGGTCATGTTTGTGCTGTTTCTCCAAGGAGGTaGCTTTGTACTGAACAAACCTGTTCTGGTCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGHVCAVSPRR*LCTEQTCSGRR Trigger: CCTTCGACCAGAACAGGTTTGTTCAGTACAAAGCAACCTCCTTGGAGAAACAGCACAAACATGACCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||
| CDS TCA 72 bp | CCCTCTGTCCTCATCATCAGAGTCAGCATCATCTTCTaGATCAGCATCACTACCAAAAATCTCCTCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSVLIIRVSIIF*ISITTKNLLFV Trigger: GACAAAGAGGAGATTTTTGGTAGTGATGCTGATTCAGAAGATGATGCTGACTCTGATGATGAGGACAGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003529.9 |
||