Pregenerated sensors for PADI6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040935Ensembl transcript IDs: ENSMUST00000038749.11, ENSMUST00000130267.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGTGAGAGACCCTAACTCCCAGCTCTCCGTCCCTTCAACCCAGTaGAACAACAACGCTCGCACCCACTACTATCTATGGCAAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: DVRDPNSQLSVPSTQ*NNNARTHYYLWQRP Trigger: TGGCCTTTGCCATAGATAGTAGTGGGTGCGAGCGTTGTTGTTGCACTGGGTTGAAGGGACGGAGAGCTGGGAGTTAGGGTCTCTCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| 3UTR GCA 72 bp | GACCCTAACTCCCAGCTCTCCGTCCCTTCAACCCAGTaGAACAACAACGCTCGCACCCACTACTATCTATGG | + |
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Preference number: 3 (lower is better) Translates to: DPNSQLSVPSTQ*NNNARTHYYLW Trigger: CCATAGATAGTAGTGGGTGCGAGCGTTGTTGTTGCACTGGGTTGAAGGGACGGAGAGCTGGGAGTTAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 90 bp | TGTCGGGGAAGTACGGCCTCGCGAAGAGTTTGGTGCTCTGCTGGTTaGAGGGGACATTCGTCAGCTGCTCCAGGCAGAAGAGCTGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: CRGSTASRRVWCSAG*RGHSSAAPGRRAAG Trigger: TCCCGCAGCTCTTCTGCCTGGAGCAGCTGACGAATGTCCCCTCCAACCAGCAGAGCACCAAACTCTTCGCGAGGCCGTACTTCCCCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS TCA 90 bp | GTCCATCTCGATAGATGTCTGCCTCCAGGGAGATCTCGATGCCGGTaGGAAACAGCACAGCTGTGGCCGTGGGGACTTCTTGGTCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VHLDRCLPPGRSRCR*ETAQLWPWGLLGQD Trigger: GTCCTGACCAAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACCGGCATCGAGATCTCCCTGGAGGCAGACATCTATCGAGATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS GCA 90 bp | TGCTGGTTGGAGGGGACATTCGTCAGCTGCTCCAGGCAGAAGAGCTaGGGGATCAGGATGATGTCCTTGTCCTCCAATCCCAGTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: CWLEGTFVSCSRQKS*GIRMMSLSSNPSSV Trigger: GACAGAACTGGGATTGGAGGACAAGGACATCATCCTGATCCCGCAGCTCTTCTGCCTGGAGCAGCTGACGAATGTCCCCTCCAACCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 90 bp | GAGGAGCCTGAGTATAGCAGAAAGCCATCTCGTCCTGGAGCCACTTaGTCTGGCGGTTGGGGTCCTCATAGACCTTTACCACCTGCACTT | + |
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Preference number: 5 (lower is better) Translates to: EEPEYSRKPSRPGAT*SGGWGPHRPLPPAL Trigger: AAGTGCAGGTGGTAAAGGTCTATGAGGACCCCAACCGCCAGAGCAAGTGGCTCCAGGACGAGATGGCTTTCTGCTATACTCAGGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 90 bp | TGCTCTGGCGGTTGGGGTCCTCATAGACCTTTACCACCTGCACTTTaGTCTTCTCGCTCAGCTTGGTCACTGAGTCCACAAAGCCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CSGGWGPHRPLPPAL*SSRSAWSLSPQSLA Trigger: TGCAAGGCTTTGTGGACTCAGTGACCAAGCTGAGCGAGAAGAGCAAAGTGCAGGTGGTAAAGGTCTATGAGGACCCCAACCGCCAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 90 bp | TATAGCAGAAAGCCATCTCGTCCTGGAGCCACTTGCTCTGGCGGTTaGGGTCCTCATAGACCTTTACCACCTGCACTTTGCTCTTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: YSRKPSRPGATCSGG*GPHRPLPPALCSSR Trigger: GCGAGAAGAGCAAAGTGCAGGTGGTAAAGGTCTATGAGGACCCCAACCGCCAGAGCAAGTGGCTCCAGGACGAGATGGCTTTCTGCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 90 bp | CCTCATAGACCTTTACCACCTGCACTTTGCTCTTCTCGCTCAGCTTaGTCACTGAGTCCACAAAGCCTTGCAGCTGTAGCTCCCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: PHRPLPPALCSSRSA*SLSPQSLAAVAPCT Trigger: TGTGCAGGGAGCTACAGCTGCAAGGCTTTGTGGACTCAGTGACCAAGCTGAGCGAGAAGAGCAAAGTGCAGGTGGTAAAGGTCTATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 90 bp | GATCCTGGGGGAACCACGGATGGTGAAAGACTTGCACTTGTCTGGTaGACACTTGCTGATGTCCAAGGTGATTTCCATGCCTACCATGCA | + |
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Preference number: 5 (lower is better) Translates to: DPGGTTDGERLALVW*TLADVQGDFHAYHA Trigger: TGCATGGTAGGCATGGAAATCACCTTGGACATCAGCAAGTGTGCACCAGACAAGTGCAAGTCTTTCACCATCCGTGGTTCCCCCAGGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 90 bp | TTGCTTATCACTTGGCATGTCCAGTTGTCCATCTCGATAGATGTCTaGCTCCAGGGAGATCTCGATGCCGGTGAGAAACAGCACAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LLITWHVQLSISIDV*LQGDLDAGEKQHSC Trigger: ACAGCTGTGCTGTTTCTCACCGGCATCGAGATCTCCCTGGAGGCAGACATCTATCGAGATGGACAACTGGACATGCCAAGTGATAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS GCA 90 bp | CCACCCGGAACATCACTGTATCCTTATAGAGCGGAATCTCTGGGATaGACTCGTCGTGAGCCTTTTCTACTAGGGAGAGTGACAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PPGTSLYPYRAESLG*TRREPFLLGRVTRR Trigger: TCTCCTTGTCACTCTCCCTAGTAGAAAAGGCTCACGACGAGTGCATCCCAGAGATTCCGCTCTATAAGGATACAGTGATGTTCCGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 90 bp | TTGGGAAATAGTTTTGCTCTCCCTCCCATTAGAAAGGAGCTGTTCTaGTCCAATGTCTTCAAACAGGGTCACGTTCCCATAGCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LGNSFALPPIRKELF*SNVFKQGHVPIAFL Trigger: AAGGAAGGCTATGGGAACGTGACCCTGTTTGAAGACATTGGAGCAGAACAGCTCCTTTCTAATGGGAGGGAGAGCAAAACTATTTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | TGGGGCTGGGCGCCACCATCCTCACCAATGCCACTGTaGGATGGTTCATTGACCTCCAGACCACAGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: WGWAPPSSPMPL*DGSLTSRPQCP Trigger: AGGACACTGTGGTCTGGAGGTCAATGAACCATCCCACAGTGGCATTGGTGAGGATGGTGGCGCCCAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | GATGGAATCCAGGCTAGCCACCCGGTGGTCCTCAGTTaGTCGGATCAGGTAGCCAGAGCCAGGGGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: DGIQASHPVVLS*SDQVARARGQC Trigger: ACACTGACCCCTGGCTCTGGCTACCTGATCCGACAAACTGAGGACCACCGGGTGGCTAGCCTGGATTCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | TGCAGCATGTCGGGGAAGTACGGCCTCGCGAAGAGTTaGGTGCTCTGCTGGTTGGAGGGGACATTCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CSMSGKYGLAKS*VLCWLEGTFVS Trigger: GCTGACGAATGTCCCCTCCAACCAGCAGAGCACCAAACTCTTCGCGAGGCCGTACTTCCCCGACATGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 90 bp | CTCGATGCCGGTGAGAAACAGCACAGCTGTGGCCGTGGGGACTTCTaGGTCAGGACAGAAGTAGGAGACCAGCACCCAAGTGAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LDAGEKQHSCGRGDF*VRTEVGDQHPSEPL Trigger: GAGTGGCTCACTTGGGTGCTGGTCTCCTACTTCTGTCCTGACCAAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACCGGCATCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130267.2 |
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| CDS GCA 72 bp | TTGGTGCTCTGCTGGTTGGAGGGGACATTCGTCAGCTaGTCCAGGCAGAAGAGCTGCGGGATCAGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: LVLCWLEGTFVS*SRQKSCGIRMM Trigger: CATCATCCTGATCCCGCAGCTCTTCTGCCTGGAGCAGCTGACGAATGTCCCCTCCAACCAGCAGAGCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | AGTACGGCCTCGCGAAGAGTTTGGTGCTCTGCTGGTTaGAGGGGACATTCGTCAGCTGCTCCAGGCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: STASRRVWCSAG*RGHSSAAPGRR Trigger: TCTTCTGCCTGGAGCAGCTGACGAATGTCCCCTCCAACCAGCAGAGCACCAAACTCTTCGCGAGGCCGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 90 bp | CTCGATGCCGGTGAGAAACAGCACAGCTGTGGCCGTGGGGACTTCTaGGTCAGGACAGAAGTAGGAGACCAGCACCTTGTCTTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LDAGEKQHSCGRGDF*VRTEVGDQHLVFIH Trigger: GTGGATGAAGACAAGGTGCTGGTCTCCTACTTCTGTCCTGACCAAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACCGGCATCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 90 bp | CAGGTTCCCGATGGAATCCAGGCTAGCCACCCGGTGGTCCTCAGTTaGTCGGATCAGGTAGCCAGAGCCAGGGGTCAGTGTGTATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QVPDGIQASHPVVLS*SDQVARARGQCVFH Trigger: ATGAAATACACACTGACCCCTGGCTCTGGCTACCTGATCCGACAAACTGAGGACCACCGGGTGGCTAGCCTGGATTCCATCGGGAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS TCA 72 bp | GATAGATGTCTGCCTCCAGGGAGATCTCGATGCCGGTaGGAAACAGCACAGCTGTGGCCGTGGGGACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DRCLPPGRSRCR*ETAQLWPWGLL Trigger: AAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACCGGCATCGAGATCTCCCTGGAGGCAGACATCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS TCA 72 bp | GGACCCTCCCTAGAGGGTAGTCTTTGCCCTGAGCCTTaGCAGGCGGAGATACCATCAGGTTCCCGATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GPSLEGSLCPEP*QAEIPSGSRWN Trigger: ATTCCATCGGGAACCTGATGGTATCTCCGCCTGTCAAGGCTCAGGGCAAAGACTACCCTCTAGGGAGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | AAGCCATCTCGTCCTGGAGCCACTTGCTCTGGCGGTTaGGGTCCTCATAGACCTTTACCACCTGCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: KPSRPGATCSGG*GPHRPLPPALC Trigger: GCAAAGTGCAGGTGGTAAAGGTCTATGAGGACCCCAACCGCCAGAGCAAGTGGCTCCAGGACGAGATGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | GGTGAGAAACAGCACAGCTGTGGCCGTGGGGACTTCTaGGTCAGGACAGAAGTAGGAGACCAGCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GEKQHSCGRGDF*VRTEVGDQHLV Trigger: GACAAGGTGCTGGTCTCCTACTTCTGTCCTGACCAAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | GGTGAGAAACAGCACAGCTGTGGCCGTGGGGACTTCTaGGTCAGGACAGAAGTAGGAGACCAGCACCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: GEKQHSCGRGDF*VRTEVGDQHPS Trigger: ACTTGGGTGCTGGTCTCCTACTTCTGTCCTGACCAAGAAGTCCCCACGGCCACAGCTGTGCTGTTTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130267.2 |
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| CDS TCA 72 bp | CACCATCCTCACCAATGCCACTGTGGGATGGTTCATTaGCCTCCAGACCACAGTGTCCTCTTTGCCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: HHPHQCHCGMVH*PPDHSVLFASD Trigger: ATCGCTGGCAAAGAGGACACTGTGGTCTGGAGGTCAATGAACCATCCCACAGTGGCATTGGTGAGGATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS TCA 72 bp | TCAGCTGCTCCAGGCAGAAGAGCTGCGGGATCAGGATaGTGTCCTTGTCCTCCAATCCCAGTTCTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAAPGRRAAGSG*CPCPPIPVLSS Trigger: TGAAGACAGAACTGGGATTGGAGGACAAGGACATCATCCTGATCCCGCAGCTCTTCTGCCTGGAGCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 72 bp | TTGGGGATTCCAAGGTTCTTGCCCAACACGATTATCTaGAGCATGTCGGGGAAGTACGGCCTCGCGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGIPRFLPNTII*SMSGKYGLAKS Trigger: ACTCTTCGCGAGGCCGTACTTCCCCGACATGCTGCAGATAATCGTGTTGGGCAAGAACCTTGGAATCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | TCCAAGGTGATTTCCATGCCTACCATGCAGAGGGCATaGGTGGGATTGACCAGAGACAGGCTGAGTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKVISMPTMQRA*VGLTRDRLSEF Trigger: GAACTCACTCAGCCTGTCTCTGGTCAATCCCACCCATGCCCTCTGCATGGTAGGCATGGAAATCACCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | GTGTCCTCTTTGCCAGCGATGACGGAGCTAGAGATGTaGATCAAGATCCTGGGGGAACCACGGATGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VSSLPAMTELEM*IKILGEPRMVK Trigger: TTTCACCATCCGTGGTTCCCCCAGGATCTTGATCCACATCTCTAGCTCCGTCATCGCTGGCAAAGAGGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | CTAGGGAGAGTGACAAGGAGATCAGGCCCGAGAAGCTaGGAGATGGGAATTCCGTGGCTTCTACGTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LGRVTRRSGPRS*EMGIPWLLRRK Trigger: CTTTCTACGTAGAAGCCACGGAATTCCCATCTCCCAGCTTCTCGGGCCTGATCTCCTTGTCACTCTCCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 72 bp | ACTTGGCATGTCCAGTTGTCCATCTCGATAGATGTCTaGCTCCAGGGAGATCTCGATGCCGGTGAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: TWHVQLSISIDV*LQGDLDAGEKQ Trigger: CTGTTTCTCACCGGCATCGAGATCTCCCTGGAGGCAGACATCTATCGAGATGGACAACTGGACATGCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS GCA 72 bp | GGTTGGGGTCCTCATAGACCTTTACCACCTGCACTTTaGTCTTCTCGCTCAGCTTGGTCACTGAGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GWGPHRPLPPAL*SSRSAWSLSPQ Trigger: TTGTGGACTCAGTGACCAAGCTGAGCGAGAAGAGCAAAGTGCAGGTGGTAAAGGTCTATGAGGACCCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | AGATCAGGCCCGAGAAGCTGGGAGATGGGAATTCCGTaGCTTCTACGTAGAAAGCCTCTTTCCTACGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSGPRSWEMGIP*LLRRKPLSYGS Trigger: AGAACCGTAGGAAAGAGGCTTTCTACGTAGAAGCCACGGAATTCCCATCTCCCAGCTTCTCGGGCCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS CCA 72 bp | CCTTTACCACCTGCACTTTGCTCTTCTCGCTCAGCTTaGTCACTGAGTCCACAAAGCCTTGCAGCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLPPALCSSRSA*SLSPQSLAAVA Trigger: AGCTACAGCTGCAAGGCTTTGTGGACTCAGTGACCAAGCTGAGCGAGAAGAGCAAAGTGCAGGTGGTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | ACCTTTACCACCTGCACTTTGCTCTTCTCGCTCAGCTaGGTCACTGAGTCCACAAAGCCTTGCAGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TFTTCTLLFSLS*VTESTKPCSCS Trigger: GCTACAGCTGCAAGGCTTTGTGGACTCAGTGACCAAGCTGAGCGAGAAGAGCAAAGTGCAGGTGGTAAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 90 bp | CCACCAGTTCATACGCAGAGGAGCCTCTCTGAGACCAGTAGACTCTaGTCTTCTTCGCCTCTTCTTCGGAGGTATGTAGGATCAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: PPVHTQRSLSETSRL*SSSPLLRRYVGSTG Trigger: ACCAGTTGATCCTACATACCTCCGAAGAAGAGGCGAAGAAGACAAGAGTCTACTGGTCTCAGAGAGGCTCCTCTGCGTATGAACTGGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS GCA 72 bp | GGAACCACGGATGGTGAAAGACTTGCACTTGTCTGGTaGACACTTGCTGATGTCCAAGGTGATTTCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GTTDGERLALVW*TLADVQGDFHA Trigger: GGCATGGAAATCACCTTGGACATCAGCAAGTGTGCACCAGACAAGTGCAAGTCTTTCACCATCCGTGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | GGGGGAACCACGGATGGTGAAAGACTTGCACTTGTCTaGTGCACACTTGCTGATGTCCAAGGTGATTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGTTDGERLALV*CTLADVQGDFH Trigger: ATGGAAATCACCTTGGACATCAGCAAGTGTGCACCAGACAAGTGCAAGTCTTTCACCATCCGTGGTTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | ATCAAGATCCTGGGGGAACCACGGATGGTGAAAGACTaGCACTTGTCTGGTGCACACTTGCTGATGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: IKILGEPRMVKD*HLSGAHLLMSK Trigger: CTTGGACATCAGCAAGTGTGCACCAGACAAGTGCAAGTCTTTCACCATCCGTGGTTCCCCCAGGATCTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CAA 72 bp | CATACGCAGAGGAGCCTCTCTGAGACCAGTAGACTCTaGTCTTCTTCGCCTCTTCTTCGGAGGTATGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: HTQRSLSETSRL*SSSPLLRRYVG Trigger: TCCTACATACCTCCGAAGAAGAGGCGAAGAAGACAAGAGTCTACTGGTCTCAGAGAGGCTCCTCTGCGTATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS CAA 72 bp | GGGCTGGCCAGCAGCAGGCGGAAGTCCTTCTGGTCGTaGTTTTTATCATTGGTAGGGACAAAGCACATGAAT | + |
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Preference number: 6 (lower is better) Translates to: GLASSRRKSFWS*FLSLVGTKHMN Trigger: ATTCATGTGCTTTGTCCCTACCAATGATAAAAACAACGACCAGAAGGACTTCCGCCTGCTGCTGGCCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS TCA 72 bp | TTCCAGCTTGGAAACCCTTGGGGTGTCAAGGATCAATaGCACCGTCTTGTGAGGAGCCTGAGTATAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FQLGNPWGVKDQ*HRLVRSLSIAE Trigger: TTCTGCTATACTCAGGCTCCTCACAAGACGGTGTCATTGATCCTTGACACCCCAAGGGTTTCCAAGCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS GCA 72 bp | CGGAGGTATGTAGGATCAACTGGTAATTCTGTAGGATaGTGGTGGGGCCCTCCACAGTTACATTCATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RRYVGSTGNSVG*WWGPPQLHSSE Trigger: CTCAGATGAATGTAACTGTGGAGGGCCCCACCAGCATCCTACAGAATTACCAGTTGATCCTACATACCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS CCA 72 bp | CAGTTACATTCATCTGAGACAGGTTCTGTATTTCTCTaGGGCCCTCCTGAAAGGACTGTTCATCAGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLHSSETGSVFL*GPPERTVHQAG Trigger: GCCAGCCTGATGAACAGTCCTTTCAGGAGGGCCCCAGAGAAATACAGAACCTGTCTCAGATGAATGTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS GCA 72 bp | AGTTTTGCTCTCCCTCCCATTAGAAAGGAGCTGTTCTaGTCCAATGTCTTCAAACAGGGTCACGTTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: SFALPPIRKELF*SNVFKQGHVPI Trigger: TATGGGAACGTGACCCTGTTTGAAGACATTGGAGCAGAACAGCTCCTTTCTAATGGGAGGGAGAGCAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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| CDS CCA 72 bp | TATGTAGGATCAACTGGTAATTCTGTAGGATGCTGGTaGGGCCCTCCACAGTTACATTCATCTGAGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: YVGSTGNSVGCW*GPPQLHSSETG Trigger: ACCTGTCTCAGATGAATGTAACTGTGGAGGGCCCCACCAGCATCCTACAGAATTACCAGTTGATCCTACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS CCA 72 bp | AGGTATGTAGGATCAACTGGTAATTCTGTAGGATGCTaGTGGGGCCCTCCACAGTTACATTCATCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RYVGSTGNSVGC*WGPPQLHSSET Trigger: TGTCTCAGATGAATGTAACTGTGGAGGGCCCCACCAGCATCCTACAGAATTACCAGTTGATCCTACATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038749.11 ENSMUST00000130267.2 |
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| CDS CAA 72 bp | CGAAAACTCTTGTCAGCCAGGATTTGGGAAATAGTTTaGCTCTCCCTCCCATTAGAAAGGAGCTGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RKLLSARIWEIV*LSLPLERSCSA Trigger: AGCAGAACAGCTCCTTTCTAATGGGAGGGAGAGCAAAACTATTTCCCAAATCCTGGCTGACAAGAGTTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038749.11 |
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