Pregenerated sensors for PADI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025328Ensembl transcript IDs: ENSMUST00000026377.9, ENSMUST00000172098.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAACACATCTTGAGACAGCCACGCCCCTCCCTTCTCCCAGTATGTaGAGAGGTTCAACTGTCCCACTGAGTCCTGCCTCTATGGCAACC | + |
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Preference number: 1 (lower is better) Translates to: RTHLETATPLPSPSM*RGSTVPLSPASMAT Trigger: GGTTGCCATAGAGGCAGGACTCAGTGGGACAGTTGAACCTCTCCACATACTGGGAGAAGGGAGGGGCGTGGCTGTCTCAAGATGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 90 bp | GCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTaGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: ASRHPSGFTHKQRSL*GWCLKLSPWVTLIP Trigger: GGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 90 bp | AGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGATaGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: RHPSGFTHKQRSLWG*CLKLSPWVTLIPMR Trigger: TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCTCCTGTGCAGAGCCCCCAGGCCAGCTGAGCATCCTCCTCGAGATGGGCAGGGCAGGAGACAGTaGCCAAAACCAAACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLLLCRAPRPAEHPPRDGQGRRQ*PKPNPW Trigger: CCAGGGGTTTGGTTTTGGCCACTGTCTCCTGCCCTG...CCCATCTCGAGGAGGATGCTCAGCTGGCCTGGGGGCTCTGCACAGGAGAAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGTCCTGCCTCTATGGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCTTCCTGGGCATCAGATaGTGGGGAGCTTGTAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TESCLYGNLQDGCIGRKLFLGIR*WGACKA Trigger: AGCCTTACAAGCTCCCCATCATCTGATGCCCAGGAA...GAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCCCAGGGTCGGTCCTGTCTTAGATTTCTCTGGGAATCCAGTTTTCCTAACAGCTGCTTGTTGTTCTaGGGTCTGTCCCAGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DPQGRSCLRFLWESSFPNSCLLF*GLSQSP Trigger: TGGAGACTGGGACAGACCCCAGAACAACAAGCAGCT...GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGACACAGGGCCCTTTCTTaGGGACACCAAGAGGATTCA | + |
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Preference number: 2 (lower is better) Translates to: LWGWCLKLSPWVTLIPMRHRALS*GHQEDS Trigger: TGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTG...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGAGGAGTTTGTGGGGATaGTGTTTAAAGCTATCGCCA | + |
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Preference number: 2 (lower is better) Translates to: NQTPGPSTIGSAGQDADKRSLWG*CLKLSP Trigger: TGGCGATAGCTTTAAACACCATCCCCACAAACTCCT...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGTCAAAAGGAGTTTGTGGGGATaGTGTTTAAAGCTATCGCCA | + |
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Preference number: 2 (lower is better) Translates to: TPGPSTIGSAGQDADKVKRSLWG*CLKLSP Trigger: TGGCGATAGCTTTAAACACCATCCCCACAAACTCCT...TTTGACCTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGCAGGGCAGGAGACAGTaGCCAAAACCAAACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMQGRRQ*PKPNPW Trigger: CCAGGGGTTTGGTTTTGGCCACTGTCTCCTGCCCTG...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CAA 90 bp | AAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTaGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATC | + |
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Preference number: 2 (lower is better) Translates to: KASRHPSGFTHKQRS*WGWCLKLSPWVTLI Trigger: GATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGAGCTGCTTGTTGTTCTaGGGTCTGTCCCAGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMSCLLF*GLSQSP Trigger: TGGAGACTGGGACAGACCCCAGAACAACAAGCAGCT...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGATGGTGTTTAAAGCTATCCACAGGGCCCTTTCTTaGGGACACCAAGAGGATTCA | + |
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Preference number: 2 (lower is better) Translates to: EWIYPQTEEFVGMVFKAIHRALS*GHQEDS Trigger: TGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTG...GATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGTGGGATCTGAATGAGTaGCAGATAAAGGCAGACATT | + |
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Preference number: 2 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGWDLNE*QIKADI Trigger: AATGTCTGCCTTTATCTGCCACTCATTCAGATCCCA...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 72 bp | CTTGAGACAGCCACGCCCCTCCCTTCTCCCAGTATGTaGAGAGGTTCAACTGTCCCACTGAGTCCTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LETATPLPSPSM*RGSTVPLSPAS Trigger: AGAGGCAGGACTCAGTGGGACAGTTGAACCTCTCCACATACTGGGAGAAGGGAGGGGCGTGGCTGTCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR TCA 72 bp | CTTCTCCCAGTATGTGGAGAGGTTCAACTGTCCCACTaGGTCCTGCCTCTATGGCAACCTGCAGGATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LLPVCGEVQLSH*VLPLWQPAGWL Trigger: CAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGTGGGACAGTTGAACCTCTCCACATACTGGGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CAA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGTCTTTAGCTGCTTGTaGTTCTGGGGTCTGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NQTPGPSTIGSAGQDADKVFSCL*FWGLSQ Trigger: CTGGGACAGACCCCAGAACAACAAGCAGCTAAAGAC...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGTCCTGCCTCTATGGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCACACAGGGCCCTTTCTaGGGGACACCAAGAGGATTC | + |
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Preference number: 3 (lower is better) Translates to: TESCLYGNLQDGCIGRKLTQGPF*GTPRGF Trigger: GAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGT...GAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR GCA 72 bp | CAGTATGTGGAGAGGTTCAACTGTCCCACTGAGTCCTaGCTCTATGGCAACCTGCAGGATGGCTGTATAGGC | + |
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Preference number: 3 (lower is better) Translates to: QYVERFNCPTES*LYGNLQDGCIG Trigger: GCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGTGGGACAGTTGAACCTCTCCACATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAAAGGCTTCTGAGGGGCTTGGGTCACCCTGGGCATTCAGTCTAGAAACCGTCTTTAGCTGCTTGTaGTTCTGGGGTCTGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: REKASEGLGSPWAFSLETVFSCL*FWGLSQ Trigger: CTGGGACAGACCCCAGAACAACAAGCAGCTAAAGAC...GGTTTCTAGACTGAATGCCCAGGGTGACCCAAGCCCCTCAGAAGCCTTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 72 bp | GGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTaGGATCTGAATGAGTGGCAGATAAAGGCAGACATT | + |
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Preference number: 3 (lower is better) Translates to: GPFLGDTKRIHV*DLNEWQIKADI Trigger: AATGTCTGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 72 bp | CATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTaGGGATGGTGTTTAAAGCTATCGCCATGGGTCACG | + |
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Preference number: 3 (lower is better) Translates to: HPSGFTHKQRSL*GWCLKLSPWVT Trigger: CGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CAA 90 bp | GACCCCCAGGGTCGGTCCTGTCTTAGATTTCTCTGGGAATCCAGTTTTCCTAACCACAAACAGAGGAGTTaGTGGGGATGGTGTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: DPQGRSCLRFLWESSFPNHKQRS*WGWCLK Trigger: CTTTAAACACCATCCCCACAAACTCCTCTGTTTGTG...GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 72 bp | AGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGATaGTGTTTAAAGCTATCGCCATGGGTCACGTTGATC | + |
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Preference number: 3 (lower is better) Translates to: SGFTHKQRSLWG*CLKLSPWVTLI Trigger: GATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR CCA 72 bp | GACACCAAGAGGATTCACGTCTGGGATCTGAATGAGTaGCAGATAAAGGCAGACATTTCAAGAGAAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: DTKRIHVWDLNE*QIKADISREKA Trigger: AGCCTTTTCTCTTGAAATGTCTGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGCACAAACAGAGGAGTTaGTGGGGATGGTGTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMHKQRS*WGWCLK Trigger: CTTTAAACACCATCCCCACAAACTCCTCTGTTTGTG...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCTTGTTGTTCTGGGGTCTGTCCCAGTCTCCATCTGCCAGGCGGACACCCATTGGCCACCACGGGTaGGCTGACCTCCAGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SCLLFWGLSQSPSARRTPIGHHG*ADLQVA Trigger: GGCAACCTGGAGGTCAGCCCACCCGTGGTGGCCAAT...GGGTGTCCGCCTGGCAGATGGAGACTGGGACAGACCCCAGAACAACAAGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR TCA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGGCTGCGGGATGTCGATaGTGTCACCCTCCGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DPHESLVDTGPFLGDTKRAAGCR*CHPPPG Trigger: GCCTGGCGGAGGGTGACATCATCGACATCCCGCAGC...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGCCACCTGGGTCACTCTaGGGCCTCTCGACCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: DPHESLVDTGPFLGDTKRPPGSL*GLSTQA Trigger: TGCCTGGGTCGAGAGGCCGCAGAGTGACCCAGGTGG...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGAGGGCTTCGGGGCCCTaGGTCCGTAGGACCATGACG | + |
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Preference number: 4 (lower is better) Translates to: DPHESLVDTGPFLGDTKRRASGP*VRRTMT Trigger: CGTCATGGTCCTACGGACCCAGGGCCCCGAAGCCCT...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGAGCCCTGGGAAGCCTaGATCCGGGAAGGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NQTPGPSTIGSAGQDADKEPWEA*IREGEA Trigger: GGCCTCTCCTTCCCGGATGCAGGCTTCCCAGGGCTC...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGCCACCTGGGTCACTCTaGGGCCTCTCGACCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: NQTPGPSTIGSAGQDADKPPGSL*GLSTQA Trigger: TGCCTGGGTCGAGAGGCCGCAGAGTGACCCAGGTGG...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR TCA 90 bp | GTCTTTAGCTGCTTGTTGTTCTGGGGTCTGTCCCAGTCTCCATCTGCCAGGCGGTCTCCAGGCCCTTGTTaGAGCACCACCGCCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VFSCLLFWGLSQSPSARRSPGPC*STTAWC Trigger: ACACCAGGCGGTGGTGCTTCAACAAGGGCCTGGAGA...CCGCCTGGCAGATGGAGACTGGGACAGACCCCAGAACAACAAGCAGCTAAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAAAGGCTTCTGAGGGGCTTGGGTCACCCTGGGCATTCAGTCTAGAAACCGAGCCCTGGGAAGCCTaGATCCGGGAAGGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: REKASEGLGSPWAFSLETEPWEA*IREGEA Trigger: GGCCTCTCCTTCCCGGATGCAGGCTTCCCAGGGCTC...GGTTTCTAGACTGAATGCCCAGGGTGACCCAAGCCCCTCAGAAGCCTTTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGGCCCTTCCCGTCGGGTaGAGGGACGAAGCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLALPVG*RDEAQE Trigger: TTCCTGAGCTTCGTCCCTGCACCCGACGGGAAGGGC...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTCTCCTGTGCAGAGCCCCCAGGCCAGCTGAGCATCCTCCTCGAGATGGGTGCACTTTCTGGGCATaGAGGAAGTTTCGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: SLLLCRAPRPAEHPPRDGCTFWA*RKFRTT Trigger: GGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCA...CCCATCTCGAGGAGGATGCTCAGCTGGCCTGGGGGCTCTGCACAGGAGAAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCTTGTTGTTCTGGGGTCTGTCCCAGTCTCCATCTGCCAGGCGGACACCCTTCCGGTTCTCTGCCTaGGGACAGATGGTGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCLLFWGLSQSPSARRTPFRFSA*GQMVSL Trigger: CAAACTCACCATCTGTCCTCAGGCAGAGAACCGGAA...GGGTGTCCGCCTGGCAGATGGAGACTGGGACAGACCCCAGAACAACAAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR TCA 90 bp | ACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGTCAAATTTCCTGGAATAGCCTaGAGCAGGCGCCAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TPGPSTIGSAGQDADKVKFPGIA*SRRQGW Trigger: CCAGCCCTGGCGCCTGCTTCAGGCTATTCCAGGAAA...TTTGACCTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGCCACACACACAGCGCTaGTGGGGTGCTCCAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: NQTPGPSTIGSAGQDADKPHTQR*WGAPET Trigger: TGTCTCTGGAGCACCCCACCAGCGCTGTGTGTGTGG...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026377.9 |
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| CDS-3UTR CCA 90 bp | TCTCTTCTCCTGTGCAGAGCCCCCAGGCCAGCTGAGCATCCTCCTCGAGATGGGCATAAATGTCCACGATaGTCTCAACCCCTGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SLLLCRAPRPAEHPPRDGHKCPR*SQPLPH Trigger: GTGTGGCAGGGGTTGAGACCATCGTGGACATTTATG...CCCATCTCGAGGAGGATGCTCAGCTGGCCTGGGGGCTCTGCACAGGAGAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026377.9 |
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| CDS-3UTR CCA 90 bp | GGGGACACCAAGAGGATTCACGTCTGGGATCTGAATGAGTGGCAGATAAAGGCAAGGGCTTCGGGGCCCTaGGTCCGTAGGACCATGACG | + |
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Preference number: 4 (lower is better) Translates to: GDTKRIHVWDLNEWQIKARASGP*VRRTMT Trigger: CGTCATGGTCCTACGGACCCAGGGCCCCGAAGCCCT...TGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGAGCAGGCGCCAGGGCTaGCCAGGAGGAGCCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGSRRQG*PGGAGS Trigger: GCTTCCGGCTCCTCCTGGCCAGCCCTGGCGCCTGCT...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGAGCAGGGACCGGCCATaGCCCCACTTCTGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLSRDRP*PHFCFS Trigger: GGAAAAGCAGAAGTGGGGCCATGGCCGGTCCCTGCT...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGTCCTGCCTCTATGGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCTCTCCAGGCCCTTGTTaGAGCACCACCGCCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TESCLYGNLQDGCIGRKLSPGPC*STTAWC Trigger: ACACCAGGCGGTGGTGCTTCAACAAGGGCCTGGAGA...GAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR GCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGGTCTTGTGTGGCGCCTaGACATACCCCAGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLVLCGA*TYPSSI Trigger: GATGGAGCTGGGGTATGTGCAGGCGCCACACAAGAC...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GGGGACACCAAGAGGATTCACGTCTGGGATCTGAATGAGTGGCAGATAAAGGCAGCCCTTCCCGTCGGGTaGAGGGACGAAGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDTKRIHVWDLNEWQIKAALPVG*RDEAQE Trigger: TTCCTGAGCTTCGTCCCTGCACCCGACGGGAAGGGC...TGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGCAGGCCAAGATGCTGACAAGGTCAAAGCCTCTAGACATCCGAGTGGATATTGGCCACCACGGGTaGGCTGACCTCCAGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVQAKMLTRSKPLDIRVDIGHHG*ADLQVA Trigger: GGCAACCTGGAGGTCAGCCCACCCGTGGTGGCCAAT...ATCCACTCGGATGTCTAGAGGCTTTGACCTTGTCAGCATCTTGGCCTGCACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGGGTCGGTCCTGTCTTAGATTTCTCTGGGAATCCAGTTTTCCTAACTTTCCTGGAATAGCCTaGAGCAGGCGCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPQGRSCLRFLWESSFPNFPGIA*SRRQGW Trigger: CCAGCCCTGGCGCCTGCTTCAGGCTATTCCAGGAAA...GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTCCATGTGCCACCACTTaGAGGCGAAGGGCTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSPCATT*RRRAPG Trigger: GCCGGGAGCCCTTCGCCTTCAAGTGGTGGCACATGG...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTACAGCGCTGGTGGGGTaGTCCAGAGACACACGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GNLQDGCIGRKLRVKSASTALVG*SRDTRT Trigger: TGTGCGTGTGTCTCTGGAGCACCCCACCAGCGCTGT...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026377.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGTCAAAGTCGTTCCGGTTCTCTaGCTGAGGACAGATGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGPSTIGSAGQDADKVKVVPVL*LRTDGE Trigger: CTCACCATCTGTCCTCAGGCAGAGAACCGGAACGAC...TTTGACCTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAGCTGCTTGTTGTTCTGGGGTCTGTCCCAGTCTCCATCTGCCAGGCGGGGGGAAGAACGCTACTaGCTTCCTCTTCTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSCLLFWGLSQSPSARRGEERY*LPLLRL Trigger: AAGACGGAGAAGAGGAAGGCAGTAGCGTTCTTCCCC...CCGCCTGGCAGATGGAGACTGGGACAGACCCCAGAACAACAAGCAGCTAAAGAC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGGGCTCCTCTCCATGCTaGGAGACACATAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPHESLVDTGPFLGDTKRGSSPC*ETHRCP Trigger: TGGACATCTATGTGTCTCCCAGCATGGAGAGGAGCC...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | AACCAAACCCCTGGGCCTTCCACCATAGGAAGTGCAGGCCAAGATGCTGACAAGGAAGGAAATGAGCCCTaGGAAGCCTGCATCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQTPGPSTIGSAGQDADKEGNEP*EACIRE Trigger: TTCCCGGATGCAGGCTTCCCAGGGCTCATTTCCTTC...CTTGTCAGCATCTTGGCCTGCACTTCCTATGGTGGAAGGCCCAGGGGTTTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGAGCAGGCGCCAGGGCTaGCCAGGAGGAGCCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMSRRQG*PGGAGS Trigger: GCTTCCGGCTCCTCCTGGCCAGCCCTGGCGCCTGCT...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GGGGACACCAAGAGGATTCACGTCTGGGATCTGAATGAGTGGCAGATAAAGGCAAGCAGGGACCGGCCATaGCCCCACTTCTGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDTKRIHVWDLNEWQIKASRDRP*PHFCFS Trigger: GGAAAAGCAGAAGTGGGGCCATGGCCGGTCCCTGCT...TGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGGGGTGCTGGGTGTCATaGTCCAGGGGGCCACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMGCWVS*SRGPPG Trigger: TCCGGGTGGCCCCCTGGATCATGACACCCAGCACCC...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGCCATGGCCCCACTTCTaGTTTTCCTGGAATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLPWPHF*FSWNSL Trigger: CAGGCTATTCCAGGAAAAGCAGAAGTGGGGCCATGG...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGGGGGAAGAACGCTACTaGCTTCCTCTTCTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLGEERY*LPLLRL Trigger: AAGACGGAGAAGAGGAAGGCAGTAGCGTTCTTCCCC...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGCAGGTTGCCCCCGATaGGGATTCTCCCCAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGAGCPR*GFSPRD Trigger: ATCCCTTGGGGAGAATCCTCATCGGGGGCAACCTGC...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGGCTGCGGGATGTCGATaGTGTCACCCTCCGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMAAGCR*CHPPPG Trigger: GCCTGGCGGAGGGTGACATCATCGACATCCCGCAGC...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAAATTTCAAGAGGATTTGGACAACCCGATTCCTGGGCATCAGATGATGCCATGTGCCACCACTTaGAGGCGAAGGGCTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEKFQEDLDNPIPGHQMMPCATT*RRRAPG Trigger: GCCGGGAGCCCTTCGCCTTCAAGTGGTGGCACATGG...CATCATCTGATGCCCAGGAATCGGGTTGTCCAAATCCTCTTGAAATTTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTAGCTCCACCAGAGGTTaGACTTTCTGGGCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLQDGCIGRKLRVKSASSSTRG*TFWAWR Trigger: CCTCCATGCCCAGAAAGTGCAACCTCTGGTGGAGCT...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAAGGCTTCTGAGGGGCTTGGGTCACCCTGGGCATTCAGTCTAGAAACCTCCAGCAGAGTGACATaGAAGGAAATGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: REKASEGLGSPWAFSLETSSRVT*KEMSPG Trigger: CCCAGGGCTCATTTCCTTCCATGTCACTCTGCTGGA...GGTTTCTAGACTGAATGCCCAGGGTGACCCAAGCCCCTCAGAAGCCTTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAGCTGCTTGTTGTTCTGGGGTCTGTCCCAGTCTCCATCTGCCAGGCGGGTGCAGCATGTGGTATaGCGTGAAGTCATCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFSCLLFWGLSQSPSARRVQHVV*REVIDE Trigger: TTCATCGATGACTTCACGCCATACCACATGCTGCAC...CCGCCTGGCAGATGGAGACTGGGACAGACCCCAGAACAACAAGCAGCTAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTTCCCCGTGCAGCATGTaGTATGGCGTGAAGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: GNLQDGCIGRKLRVKSASSPCSM*YGVKSS Trigger: CGATGACTTCACGCCATACCACATGCTGCACGGGGA...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGAGGGTCCGTAGGACCATaGCGGACATGTCTTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWGWCLKLSPWVTLIPMRGSVGP*RTCLPD Trigger: ATCTGGAAGACATGTCCGTCATGGTCCTACGGACCC...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTGGAGTATGGGAAGGATaGGGGACTTCCTCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GNLQDGCIGRKLRVKSASGVWEG*GTSSDM Trigger: CATGTCTGAGGAAGTCCCTCATCCTTCCCATACTCC...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGGGTCGGTCCTGTCTTAGATTTCTCTGGGAATCCAGTTTTCCTAACCCATGGCCCCACTTCTaGTTTTCCTGGAATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQGRSCLRFLWESSFPNPWPHF*FSWNSL Trigger: CAGGCTATTCCAGGAAAAGCAGAAGTGGGGCCATGG...GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGCAGGCCAAGATGCTGACAAGGTCAAAGCCTCTAGACATCCGAGTGGATGGCTCCTCTCCATGCTaGGAGACACATAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVQAKMLTRSKPLDIRVDGSSPC*ETHRCP Trigger: TGGACATCTATGTGTCTCCCAGCATGGAGAGGAGCC...ATCCACTCGGATGTCTAGAGGCTTTGACCTTGTCAGCATCTTGGCCTGCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTTGGAGGATAAGCCTGTaGTCCTCAAAGAGGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNLQDGCIGRKLRVKSASWRISL*SSKRAS Trigger: CGAAGCCCTCTTTGAGGACCACAGGCTTATCCTCCA...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGAGAAGGAAATGAGCCCTaGGAAGCCTGCATCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWGWCLKLSPWVTLIPMREGNEP*EACIRE Trigger: TTCCCGGATGCAGGCTTCCCAGGGCTCATTTCCTTC...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GGGGACACCAAGAGGATTCACGTCTGGGATCTGAATGAGTGGCAGATAAAGGCATCCAGCAGAGTGACATaGAAGGAAATGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDTKRIHVWDLNEWQIKASSRVT*KEMSPG Trigger: CCCAGGGCTCATTTCCTTCCATGTCACTCTGCTGGA...TGCCTTTATCTGCCACTCATTCAGATCCCAGACGTGAATCCTCTTGGTGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGTCCTGCCTCTATGGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGGTTGCACTTTCTaGGCATGGAGGAAGTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TESCLYGNLQDGCIGRKLRGCTF*AWRKFR Trigger: GCGAAACTTCCTCCATGCCCAGAAAGTGCAACCTCT...GAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGATTCACGTCTGGTGCAGCATGTGGTATaGCGTGAAGTCATCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESGRHRALSWGHQEDSRLVQHVV*REVIDE Trigger: TTCATCGATGACTTCACGCCATACCACATGCTGCAC...CAGACGTGAATCCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTGGGTCCGTAGGACCATaGCGGACATGTCTTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSGSVGP*RTCLPD Trigger: ATCTGGAAGACATGTCCGTCATGGTCCTACGGACCC...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGATGGTGTTTAAAGCTATCGCAGGTTGCCCCCGATaGGGATTCTCCCCAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EWIYPQTEEFVGMVFKAIAGCPR*GFSPRD Trigger: ATCCCTTGGGGAGAATCCTCATCGGGGGCAACCTGC...GATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR GCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTAGCTCCACCAGAGGTTaGACTTTCTGGGCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSSSTRG*TFWAWR Trigger: CCTCCATGCCCAGAAAGTGCAACCTCTGGTGGAGCT...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGTCCCCGTGCAGCATGTaGTATGGCGTGAAGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGSPCSM*YGVKSS Trigger: CGATGACTTCACGCCATACCACATGCTGCACGGGGA...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTGGAGGATAAGCCTGTaGTCCTCAAAGAGGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSWRISL*SSKRAS Trigger: CGAAGCCCTCTTTGAGGACCACAGGCTTATCCTCCA...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTGCACTTTCTGGGCATaGAGGAAGTTTCGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSCTFWA*RKFRTT Trigger: GGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCA...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGAAGAGGTTGCACTTTCTaGGCATGGAGGAAGTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LWGWCLKLSPWVTLIPMRRGCTF*AWRKFR Trigger: GCGAAACTTCCTCCATGCCCAGAAAGTGCAACCTCT...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| 3UTR CAA 72 bp | AGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTaGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHPSGFTHKQRS*WGWCLKLSPWV Trigger: GACCCATGGCGATAGCTTTAAACACCATCCCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTGGTCACAGTTATCTTaGGCATTAGAGTCGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: DKVKASRHPSGFTHKQRSWSQLS*ALESTL Trigger: CAATGTCGACTCTAATGCCCAAGATAACTGTGACCA...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS TCA 90 bp | CCTGGGTCACTCTGCGGCCTCTCGACCCAGGCAGGTTGCCCCCGATaGGGATTCTCCCCAAGGGATACTCCTTCCCATTGGCCACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSLCGLSTQAGCPR*GFSPRDTPSHWPPR Trigger: CCGTGGTGGCCAATGGGAAGGAGTATCCCTTGGGGAGAATCCTCATCGGGGGCAACCTGCCTGGGTCGAGAGGCCGCAGAGTGACCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS CCA 90 bp | AGCACCACCGCCTGGTGTCAGCTCGCTCTCGGCTCCTCTCCATGCTaGGAGACACATAGATGTCCACTCCCGGTGTCCCGTAGACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: STTAWCQLALGSSPC*ETHRCPLPVSRRPQ Trigger: TTGAGGTCTACGGGACACCGGGAGTGGACATCTATGTGTCTCCCAGCATGGAGAGGAGCCGAGAGCGAGCTGACACCAGGCGGTGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS GCA 90 bp | ATAGGACTCACAGGAATCCTCGGGGCCGCAGACATGGAAGACCCGTaGCCGCTCTGCATCACAGCTGGAGGTGTGGAGGATAAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IGLTGILGAADMEDP*PLCITAGGVEDKPV Trigger: CACAGGCTTATCCTCCACACCTCCAGCTGTGATGCAGAGCGGGCACGGGTCTTCCATGTCTGCGGCCCCGAGGATTCCTGTGAGTCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
||
| CDS-3UTR CAA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGGGATACTCCTTCCCATaGGCCACCACGGGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DPHESLVDTGPFLGDTKRGYSFP*ATTGGL Trigger: CAGCCCACCCGTGGTGGCCAATGGGAAGGAGTATCC...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 90 bp | TCAGGCCCCCACACCCACTGCCTCTTATCCACGAAGCTCCTGTCCTaGCGGTCCGCACAGTTCATGTCACAGTCTAGGGTGATGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGPHTHCLLSTKLLS*RSAQFMSQSRVMST Trigger: TGTGGACATCACCCTAGACTGTGACATGAACTGTGCGGACCGGCAGGACAGGAGCTTCGTGGATAAGAGGCAGTGGGTGTGGGGGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 90 bp | CTCCTCATAGCCCTTCAGGCGGGGCACCTCATAGGACATCCTGTCTaGGCCCAGAACACACTTATAGGACTCACAGGAATCCTCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLIALQAGHLIGHPV*AQNTLIGLTGILGA Trigger: GGCCCCGAGGATTCCTGTGAGTCCTATAAGTGTGTTCTGGGCCCAGACAGGATGTCCTATGAGGTGCCCCGCCTGAAGGGCTATGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 90 bp | ACAGCCAGCCAGTCCACAAACAGCTCCACCAGAGGTTGCACTTTCTaGGCATGGAGGAAGTTTCGCACCACCTGGGTCACTCTGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TASQSTNSSTRGCTF*AWRKFRTTWVTLRP Trigger: AGGCCGCAGAGTGACCCAGGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCAACCTCTGGTGGAGCTGTTTGTGGACTGGCTGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS TCA 90 bp | TGTGGTCCTCAAAGAGGGCTTCGGGGCCCTGGGTCCGTAGGACCATaGCGGACATGTCTTCCAGATCTTGCAGGCAACGCACATATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGPQRGLRGPGSVGP*RTCLPDLAGNAHIG Trigger: ACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGTCCTACGGACCCAGGGCCCCGAAGCCCTCTTTGAGGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | GATCCCCATGAGAGTCTGGTAGACACAGGGCCCTTTCTTGGGGACACCAAGAGGTTCCTCTTCTCCGTCTaGAAGAGCTGCGGGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DPHESLVDTGPFLGDTKRFLFSV*KSCGMS Trigger: CGACATCCCGCAGCTCTTCAAGACGGAGAAGAGGAA...CCTCTTGGTGTCCCCAAGAAAGGGCCCTGTGTCTACCAGACTCTCATGGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | GGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCAGAGTTAAGTCAGCCAGTACCATGTGCCACCACTaGAAGGCGAAGGGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GNLQDGCIGRKLRVKSASTMCHH*KAKGSR Trigger: CCGGGAGCCCTTCGCCTTCAAGTGGTGGCACATGGT...ACTGGCTGACTTAACTCTGAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 90 bp | GGGGTCTCGGAGAAGTCCTCATTAGAATCATCCAGCAGAGTGACATaGAAGGAAATGAGCCCTGGGAAGCCTGCATCCGGGAAGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSEKSSLESSSRVT*KEMSPGKPASGKER Trigger: CCTCTCCTTCCCGGATGCAGGCTTCCCAGGGCTCATTTCCTTCCATGTCACTCTGCTGGATGATTCTAATGAGGACTTCTCCGAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGTCCTGCCTCTATGGCAACCTGCAGGATGGCTGTATAGGCAGAAAGCTCATAATCTCCAGGCCCTaGTTGAAGCACCACCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TESCLYGNLQDGCIGRKLIISRP*LKHHRL Trigger: CAGGCGGTGGTGCTTCAACAAGGGCCTGGAGATTAT...GAGCTTTCTGCCTATACAGCCATCCTGCAGGTTGCCATAGAGGCAGGACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGGGATACTCCTTCCCATaGGCCACCACGGGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGGYSFP*ATTGGL Trigger: CAGCCCACCCGTGGTGGCCAATGGGAAGGAGTATCC...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTCTCGACCCAGGCAGGTaGCCCCCGATGAGGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKVKASRHPSGFTHKQRSLDPGR*PPMRIL Trigger: GAGAATCCTCATCGGGGGCAACCTGCCTGGGTCGAG...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | GACAAGGTCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTACCATGTGCCACCACTaGAAGGCGAAGGGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DKVKASRHPSGFTHKQRSTMCHH*KAKGSR Trigger: CCGGGAGCCCTTCGCCTTCAAGTGGTGGCACATGGT...ACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGACCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 90 bp | GGGCCCTGGGTCCGTAGGACCATGACGGACATGTCTTCCAGATCTTaGAGGCAACGCACATATTGGTCACAGTTATCTTGGGCATTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPWVRRTMTDMSSRS*RQRTYWSQLSWALE Trigger: CTCTAATGCCCAAGATAACTGTGACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGTCCTACGGACCCAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGGGTCGGTCCTGTCTTAGATTTCTCTGGGAATCCAGTTTTCCTAACTTCCTCTTCTCCGTCTaGAAGAGCTGCGGGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DPQGRSCLRFLWESSFPNFLFSV*KSCGMS Trigger: CGACATCCCGCAGCTCTTCAAGACGGAGAAGAGGAA...GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCCTCTAGACATCCGAGTGGATTTACCCACAAACAGAGGAGTTTGTGGGATAATCTCCAGGCCCTaGTTGAAGCACCACCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKPLDIRVDLPTNRGVCGIISRP*LKHHRL Trigger: CAGGCGGTGGTGCTTCAACAAGGGCCTGGAGATTAT...CCCACAAACTCCTCTGTTTGTGGGTAAATCCACTCGGATGTCTAGAGGCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAAAGGCTTCTGAGGGGCTTGGGTCACCCTGGGCATTCAGTCTAGAAACCCTGTCGTTGAGGTCATaGCTAGGGGAGTTCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: REKASEGLGSPWAFSLETLSLRS*LGEFMI Trigger: AATCATGAACTCCCCTAGCAATGACCTCAACGACAG...GGTTTCTAGACTGAATGCCCAGGGTGACCCAAGCCCCTCAGAAGCCTTTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGACAGGCAACGCACATATaGGTCACAGTTATCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWGWCLKLSPWVTLIPMRQATHI*VTVILG Trigger: GCCCAAGATAACTGTGACCAATATGTGCGTTGCCTG...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGGGATGGTGTTTAAAGCTATCGCCATGGGTCACGTTGATCCCCATGAGACTGTCGTTGAGGTCATaGCTAGGGGAGTTCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWGWCLKLSPWVTLIPMRLSLRS*LGEFMI Trigger: AATCATGAACTCCCCTAGCAATGACCTCAACGACAG...TCTCATGGGGATCAACGTGACCCATGGCGATAGCTTTAAACACCATCCCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 90 bp | ACCATGACGGACATGTCTTCCAGATCTTGCAGGCAACGCACATATTaGTCACAGTTATCTTGGGCATTAGAGTCGACATTGTCCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TMTDMSSRSCRQRTY*SQLSWALESTLSRS Trigger: TGATCGGGACAATGTCGACTCTAATGCCCAAGATAACTGTGACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS TCA 90 bp | TGTGCAAACTTATTAAAGTTGATAAGGCTCTGGTTGTTAAGAATCTaGTTGATGGAGACGGTCTGGACCCGCCTGTCGCCAATGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: CANLLKLIRLWLLRI*LMETVWTRLSPMTP Trigger: GGGTGTCATTGGCGACAGGCGGGTCCAGACCGTCTCCATCAATCAGATTCTTAACAACCAGAGCCTTATCAACTTTAATAAGTTTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 72 bp | CTCGGGGCCGCAGACATGGAAGACCCGTGCCCGCTCTaGATCACAGCTGGAGGTGTGGAGGATAAGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAADMEDPCPL*ITAGGVEDKPV Trigger: CACAGGCTTATCCTCCACACCTCCAGCTGTGATGCAGAGCGGGCACGGGTCTTCCATGTCTGCGGCCCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 72 bp | ACCGCCTGGTGTCAGCTCGCTCTCGGCTCCTCTCCATaGTGGGAGACACATAGATGTCCACTCCCGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAWCQLALGSSP*WETHRCPLPVS Trigger: GGACACCGGGAGTGGACATCTATGTGTCTCCCAGCATGGAGAGGAGCCGAGAGCGAGCTGACACCAGGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | GCCTGGTGTCAGCTCGCTCTCGGCTCCTCTCCATGCTaGGAGACACATAGATGTCCACTCCCGGTGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AWCQLALGSSPC*ETHRCPLPVSR Trigger: ACGGGACACCGGGAGTGGACATCTATGTGTCTCCCAGCATGGAGAGGAGCCGAGAGCGAGCTGACACCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | TGCACTTTCTGGGCATGGAGGAAGTTTCGCACCACCTaGGTCACTCTGCGGCCTCTCGACCCAGGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CTFWAWRKFRTT*VTLRPLDPGRL Trigger: CAACCTGCCTGGGTCGAGAGGCCGCAGAGTGACCCAGGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS TCA 72 bp | CAAAGAGGGCTTCGGGGCCCTGGGTCCGTAGGACCATaGCGGACATGTCTTCCAGATCTTGCAGGCAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: QRGLRGPGSVGP*RTCLPDLAGNA Trigger: TGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGTCCTACGGACCCAGGGCCCCGAAGCCCTCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | CGATGGTCTCAACCCCTGCCACACACACAGCGCTGGTaGGGTGCTCCAGAGACACACGCACAATCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RWSQPLPHTQRW*GAPETHAQSSV Trigger: TACAGAGGATTGTGCGTGTGTCTCTGGAGCACCCCACCAGCGCTGTGTGTGTGGCAGGGGTTGAGACCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026377.9 |
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| CDS GCA 72 bp | CCACTCCCGGTGTCCCGTAGACCTCAAACATGTCTGTaGCCTCAGGAACCGCCCCATAAATGTCCACGATGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPVSRRPQTCL*PQEPPHKCPRW Trigger: CCATCGTGGACATTTATGGGGCGGTTCCTGAGGGCACAGACATGTTTGAGGTCTACGGGACACCGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026377.9 |
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| CDS GCA 72 bp | ACAGCCAGCCAGTCCACAAACAGCTCCACCAGAGGTTaGACTTTCTGGGCATGGAGGAAGTTTCGCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: TASQSTNSSTRG*TFWAWRKFRTT Trigger: GGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCAACCTCTGGTGGAGCTGTTTGTGGACTGGCTGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | GCCCTTCAGGCGGGGCACCTCATAGGACATCCTGTCTaGGCCCAGAACACACTTATAGGACTCACAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ALQAGHLIGHPV*AQNTLIGLTGI Trigger: GATTCCTGTGAGTCCTATAAGTGTGTTCTGGGCCCAGACAGGATGTCCTATGAGGTGCCCCGCCTGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CAA 72 bp | TCGGGGAAGAACGCTACTGCCTTCCTCTTCTCCGTCTaGAAGAGCTGCGGGATGTCGATGATGTCACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGKNATAFLFSV*KSCGMSMMSPS Trigger: GGAGGGTGACATCATCGACATCCCGCAGCTCTTCAAGACGGAGAAGAGGAAGGCAGTAGCGTTCTTCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | CAGTCCACAAACAGCTCCACCAGAGGTTGCACTTTCTaGGCATGGAGGAAGTTTCGCACCACCTGGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: QSTNSSTRGCTF*AWRKFRTTWVT Trigger: AGTGACCCAGGTGGTGCGAAACTTCCTCCATGCCCAGAAAGTGCAACCTCTGGTGGAGCTGTTTGTGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CAA 72 bp | GGGGAGTTCATGATTACAATAATCTCCAGGCCCTTGTaGAAGCACCACCGCCTGGTGTCAGCTCGCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GEFMITIISRPL*KHHRLVSARSR Trigger: CCGAGAGCGAGCTGACACCAGGCGGTGGTGCTTCAACAAGGGCCTGGAGATTATTGTAATCATGAACTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CAA 90 bp | TCATTGCTAGGGGAGTTCATGATTACAATAATCTCCAGGCCCTTGTaGAAGCACCACCGCCTGGTGTCAGCTCGCTCTCGGCTCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLGEFMITIISRPL*KHHRLVSARSRLLS Trigger: GGAGAGGAGCCGAGAGCGAGCTGACACCAGGCGGTGGTGCTTCAACAAGGGCCTGGAGATTATTGTAATCATGAACTCCCCTAGCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 72 bp | GACCAGCATATTCACCAAGTCGGGGAAGAACGCTACTaGCTTCCTCTTCTCCGTCTTGAAGAGCTGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: DQHIHQVGEERY*LPLLRLEELRD Trigger: ATCCCGCAGCTCTTCAAGACGGAGAAGAGGAAGGCAGTAGCGTTCTTCCCCGACTTGGTGAATATGCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CCA 72 bp | GAGAAGTCCTCATTAGAATCATCCAGCAGAGTGACATaGAAGGAAATGAGCCCTGGGAAGCCTGCATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: EKSSLESSSRVT*KEMSPGKPASG Trigger: CCCGGATGCAGGCTTCCCAGGGCTCATTTCCTTCCATGTCACTCTGCTGGATGATTCTAATGAGGACTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS GCA 72 bp | GTCCGTAGGACCATGACGGACATGTCTTCCAGATCTTaGAGGCAACGCACATATTGGTCACAGTTATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRRTMTDMSSRS*RQRTYWSQLSW Trigger: CCAAGATAACTGTGACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGTCCTACGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CAA 90 bp | GACCATGACGGACATGTCTTCCAGATCTTGCAGGCAACGCACATATaGGTCACAGTTATCTTGGGCATTAGAGTCGACATTGTCCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: DHDGHVFQILQATHI*VTVILGIRVDIVPI Trigger: GATCGGGACAATGTCGACTCTAATGCCCAAGATAACTGTGACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCCGTCATGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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| CDS CAA 72 bp | GGACATGTCTTCCAGATCTTGCAGGCAACGCACATATaGGTCACAGTTATCTTGGGCATTAGAGTCGACATT | + |
|
Preference number: 6 (lower is better) Translates to: GHVFQILQATHI*VTVILGIRVDI Trigger: AATGTCGACTCTAATGCCCAAGATAACTGTGACCAATATGTGCGTTGCCTGCAAGATCTGGAAGACATGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026377.9 ENSMUST00000172098.2 |
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