Pregenerated sensors for PADI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025329Ensembl transcript IDs: ENSMUST00000026378.4
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTTCCTaGCCACCCCCACCCACGCTTGCAGACTTACGACGGGCTCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: HPKMGKLSAFLVQPS*PPPPTLADLRRAPY Trigger: ATAGGGAGCCCGTCGTAAGTCTGCAAGCGTGGGTGGGGGTGGGCAGGAAGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 90 bp | CCTGAGCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTaGTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PERQLQSPHHVVLKT*SHGRLSPLLFRGRA Trigger: TGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 90 bp | TTGATGAGAAAGACGGTGGCCAGTCAGCCAGGACCCCAGACAGCCTaGGCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTG | + |
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Preference number: 1 (lower is better) Translates to: LMRKTVASQPGPQTA*AATPESPSCGAEDL Trigger: CAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGCTCAGGCTGTCTGGGGTCCTGGCTGACTGGCCACCGTCTTTCTCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 90 bp | ACGCCCCAAATCTTCCTTTACATCTTACGCAATCCAGGAGTCATATaGAACCACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: TPQIFLYILRNPGVI*NHGALAPGSWQGGH Trigger: ATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGTAAGATGTAAAGGAAGATTTGGGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 90 bp | TCCGTTGAACTGAACGGTGCCAGAGGGCCATGGCCTGAGGTCCTTTaGGAAGAAGGACGCCCCAAATCTTCCTTTACATCTTACGCAATC | + |
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Preference number: 1 (lower is better) Translates to: SVELNGARGPWPEVL*EEGRPKSSFTSYAI Trigger: GATTGCGTAAGATGTAAAGGAAGATTTGGGGCGTCCTTCTTCCCAAAGGACCTCAGGCCATGGCCCTCTGGCACCGTTCAGTTCAACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 90 bp | CTTCCTTTACATCTTACGCAATCCAGGAGTCATATGAAACCACGGTaGTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LPLHLTQSRSHMKPR*SCPRVLARWAFRSR Trigger: TCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGTAAGATGTAAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCGGCCTCTGCCAGCCATaGCCTGCAGCTGGGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TCSHGRLSPLLFRGRASPGLCQP*PAAGSA Trigger: GGCAGACCCAGCTGCAGGGCATGGCTGGCAGAGGCC...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | GCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCTGCCAGCCATGCCCTaGAGCTGGGTCTGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AATPESPSCGAEDLLPWSLPAMP*SWVCLP Trigger: AGGCAGGCAGACCCAGCTGCAGGGCATGGCTGGCAG...CGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCACATCTGGACCAACAGCCTTCAGGTTCAGGGGCCCTAAACACCCAGCCAAAGTGGGGCGTGGCTaGGGAGGCCACACCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PSTSGPTAFRFRGPKHPAKVGRG*GGHTLN Trigger: GTTCAAGGTGTGGCCTCCGCAGCCACGCCCCACTTT...GGCTGGGTGTTTAGGGCCCCTGAACCTGAAGGCTGTTGGTCCAGATGTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCACATCTGGACCAACAGCCTTCAGGTTCAGGGGCCCTAAACACCCAGCCAAACCACGGTGCTCTTaGCCCAGGGTCCTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PSTSGPTAFRFRGPKHPAKPRCS*PRVLAR Trigger: CCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTT...GGCTGGGTGTTTAGGGCCCCTGAACCTGAAGGCTGTTGGTCCAGATGTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | CACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGAGCTACGGGTTTCAGAGAGGTaGAGGGTTGGGGGTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: HGALAPGSWQGGHFVPELRVSER*RVGGGT Trigger: TGTCCCACCCCCAACCCTCCACCTCTCTGAAACCCG...TAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | TCAACTTCCGGCCTTGACCCTCTCAGGGCTCTAGCTGGGAATGGGAGAAGGAAACTGGTTCGTGGCCCTTaGCCTTGCCCTGGGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: STSGLDPLRALAGNGRRKLVRGP*PCPGTP Trigger: GGGAGTCCCAGGGCAAGGGCAAGGGCCACGAACCAG...TTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGAGGGTCAAGGCCGGAAGTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCCATATGAAACCACGGTaGTCTTGCCCCAGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TCSHGRLSPLLFRGRASPHMKPR*SCPRVL Trigger: CAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATG...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | TACCAAGACAGAATCCAGTGGCCTGTGGTGGCTCCTGGACCACAGGAGGAAGATCCCTGCAGCTGGGTCTaGCTGCCTGCTTGCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: YQDRIQWPVVAPGPQEEDPCSWV*LPACLH Trigger: GTGGAGGCAAGCAGGCAGGCAGACCCAGCTGCAGGG...ATCTTCCTCCTGTGGTCCAGGAGCCACCACAGGCCACTGGATTCTGTCTTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCATATGAAACCACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTGTGGAGGCTGGTTCGTaGCCCTTGCCCTTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SHMKPRCSCPRVLARWAFVEAGS*PLPLPW Trigger: CCAGGGCAAGGGCAAGGGCCACGAACCAGCCTCCAC...AAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCAGTGTGTTGTCCTCCTaGCGCTCAGCTGACCACAGT | + |
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Preference number: 2 (lower is better) Translates to: TCSHGRLSPLLFRGRASPSVLSS*RSADHS Trigger: ACTGTGGTCAGCTGAGCGCCAGGAGGACAACACACT...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACAGCTCAAAGTGGGGCGTGGCTGCGGAGGCCACACCTTGAACAGGCTCGGCTCTAGCTGGGAATaGGAGAAGGAAAAGTGGCGA | + |
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Preference number: 2 (lower is better) Translates to: VGQLKVGRGCGGHTLNRLGSSWE*EKEKWR Trigger: TCGCCACTTTTCCTTCTCCCATTCCCAGCTAGAGCC...GAGCCTGTTCAAGGTGTGGCCTCCGCAGCCACGCCCCACTTTGAGCTGTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAGTGGAGGGTTGGGGGTaGGACAGCTCAAAGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: CREPTNGVPVPQTLLEGGVEGWG*DSSKWG Trigger: GCCCCACTTTGAGCTGTCCCACCCCCAACCCTCCAC...TCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCTCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCCAACCCTTCTCATCCTCCTTTCCCTCCCACTGCCTaGAGCAGGATCGGGAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSEVGHRPNPSHPPFPPTA*SRIGSN Trigger: ATTACTCCCGATCCTGCTGCAGGCAGTGGGAGGGAA...AGGAGGATGAGAAGGGTTGGGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCCAACCCTTCTCATCCTCCTCAAGACAGAATCCAGTaGCCTGTGGTGGCTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSEVGHRPNPSHPPQDRIQ*PVVAPG Trigger: TCCAGGAGCCACCACAGGCCACTGGATTCTGTCTTG...AGGAGGATGAGAAGGGTTGGGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCCAACCCTTCTCATCCTCCTTTCCACAGACCCTTCTaGAAGGGGGAAGAGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSEVGHRPNPSHPPFHRPF*KGEEPM Trigger: CATTGGCTCTTCCCCCTTCCAGAAGGGTCTGTGGAA...AGGAGGATGAGAAGGGTTGGGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTCGGACTGGATGGAGTTaGGCATTAGAGGGGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPRTGWS*ALEGLL Trigger: CAAAAGCCCCTCTAATGCTCAACTCCATCCAGTCCG...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCCAACCCTTCTCATCCTCCTTCTCAGGGCTCTAGCTaGGAATGGGAGAAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: CLLSSSEVGHRPNPSHPPSQGSS*EWEKEK Trigger: CTTTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGA...AGGAGGATGAGAAGGGTTGGGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR GCA 90 bp | CACAACGATGTTTTTATTGATGAGAAAGACGGTGGCCAGTCAGCCAGGACCCCACTGCTTGCCTCCACATaGCTCTGTTACCTCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HNDVFIDEKDGGQSARTPLLAST*LCYLSW Trigger: CCAGCTGAGGTAACAGAGGCATGTGGAGGCAAGCAG...TGGGGTCCTGGCTGACTGGCCACCGTCTTTCTCATCAATAAAAACATCGTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CAA 90 bp | TTTACATCTTACGCAATCCAGGAGTCATATGAAACCACGGTGCTCTaGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: FTSYAIQESYETTVL*PQGPGKVGISFQSY Trigger: ATAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGTAAGATGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CCA 90 bp | CACAACGATGTTTTTATTGATGAGAAAGACGGTGGCCAGTCAGCCAGGACCCCACAGAGAGCCTACAAATaGGGTTCCAGTTCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: HNDVFIDEKDGGQSARTPQRAYK*GSSSTD Trigger: GTCTGTGGAACTGGAACCCCATTTGTAGGCTCTCTG...TGGGGTCCTGGCTGACTGGCCACCGTCTTTCTCATCAATAAAAACATCGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 72 bp | GGGTTGGGGGTGGGACAGCTCAAAGTGGGGCGTGGCTaGGGAGGCCACACCTTGAACAGGCTCAACTTCCGG | + |
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Preference number: 3 (lower is better) Translates to: GLGVGQLKVGRG*GGHTLNRLNFR Trigger: CCGGAAGTTGAGCCTGTTCAAGGTGTGGCCTCCGCAGCCACGCCCCACTTTGAGCTGTCCCACCCCCAACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | AGGGTGGAGGCTGGTTCGTGGCCCTTGCCCTTGCCCTaGGACTCCCATCAGCTGGGAAGCAAGGGTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: RVEAGSWPLPLP*DSHQLGSKGGG Trigger: ACCACCACCCTTGCTTCCCAGCTGATGGGAGTCCCAGGGCAAGGGCAAGGGCCACGAACCAGCCTCCACCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCGAAACCACGGTGCTCTaGCCCCAGGGTCCTGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: TCSHGRLSPLLFRGRASPETTVL*PQGPGK Trigger: CTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTC...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | AGCTCAAAGTGGGGCGTGGCTGCGGAGGCCACACCTTaGACAGGCTCAACTTCCGGCCTTGACCCTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SSKWGVAAEATP*TGSTSGLDPLR Trigger: CCTGAGAGGGTCAAGGCCGGAAGTTGAGCCTGTTCAAGGTGTGGCCTCCGCAGCCACGCCCCACTTTGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | AAGACGGTGGCCAGTCAGCCAGGACCCCAGACAGCCTaGGCGGCAACTCCAGAGTCCCCATCATGTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: KTVASQPGPQTA*AATPESPSCGA Trigger: AGCACCACATGATGGGGACTCTGGAGTTGCCGCTCAGGCTGTCTGGGGTCCTGGCTGACTGGCCACCGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | TGGAGGGTTGGGGGTGGGACAGCTCAAAGTGGGGCGTaGCTGCGGAGGCCACACCTTGAACAGGCTCAACTT | + |
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Preference number: 3 (lower is better) Translates to: WRVGGGTAQSGA*LRRPHLEQAQL Trigger: AAGTTGAGCCTGTTCAAGGTGTGGCCTCCGCAGCCACGCCCCACTTTGAGCTGTCCCACCCCCAACCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CAA 90 bp | TCAACTTCCGGCCTTGACCCTCTCAGGGCTCTAGCTGGGAATGGGAGAAGGAAAGCTGGTTCGTGGCCCTaGCCCTTGCCCTGGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: STSGLDPLRALAGNGRRKAGSWP*PLPWDS Trigger: GGAGTCCCAGGGCAAGGGCAAGGGCCACGAACCAGC...TTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGAGGGTCAAGGCCGGAAGTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCACATCTGGACCAACAGCCTTCAGGTTCAGGGGCCCTAAACACCCAGCCTGCGGAGGCCACACCTaGAACAGGCTCAACTTCCGG | + |
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Preference number: 3 (lower is better) Translates to: PSTSGPTAFRFRGPKHPACGGHT*NRLNFR Trigger: CCGGAAGTTGAGCCTGTTCAAGGTGTGGCCTCCGCA...GGCTGGGTGTTTAGGGCCCCTGAACCTGAAGGCTGTTGGTCCAGATGTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | CTGAGCGGCAACTCCAGAGTCCCCATCATGTGGTGCTaGAGACTTGCTCCCATGGTCGCCTGTCTCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSGNSRVPIMWC*RLAPMVACLLS Trigger: GGAGAGGAGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 72 bp | CTGCAGCCGGGCCATGCTCATAGAGGAGGCTGTTCGTaGAGAGAGCCTACAAATGGGGTTCCAGTTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: LQPGHAHRGGCS*REPTNGVPVPQ Trigger: CTGTGGAACTGGAACCCCATTTGTAGGCTCTCTGCACGAACAGCCTCCTCTATGAGCATGGCCCGGCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | ACTGAGTTTTCCTGCCCTTGCTTGCCTCCGTTGAACTaGACGGTGCCAGAGGGCCATGGCCTGAGGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: TEFSCPCLPPLN*TVPEGHGLRSF Trigger: AAAGGACCTCAGGCCATGGCCCTCTGGCACCGTTCAGTTCAACGGAGGCAAGCAAGGGCAGGAAAACTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | AAGCCTTCGCTAACTGAGTGTCCGCCGGTTATGAAGTaGCAGCAGCTGCCTCAAGTCTGGGGTGGCACCAGA | + |
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Preference number: 3 (lower is better) Translates to: KPSLTECPPVMK*QQLPQVWGGTR Trigger: TCTGGTGCCACCCCAGACTTGAGGCAGCTGCTGTCACTTCATAACCGGCGGACACTCAGTTAGCGAAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 72 bp | ACGCAATCCAGGAGTCATATGAAACCACGGTGCTCTTaGCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TQSRSHMKPRCS*PRVLARWAFRS Trigger: GGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | CTCCGGCAGGTAACGAGCATCCTGCAGAGGTCGGACTaGATGGAGTTGAGCATTAGAGGGGCTTTTGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LRQVTSILQRSD*MELSIRGAFVP Trigger: AGGCACAAAAGCCCCTCTAATGCTCAACTCCATCCAGTCCGACCTCTGCAGGATGCTCGTTACCTGCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CAA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTGCATTAGAGGGGCTTTaGTGCCTGCTCGCTTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPALEGL*CLLAFK Trigger: CTTGAAAGCGAGCAGGCACAAAAGCCCCTCTAATGC...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR GCA 72 bp | CAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTaGTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QLQSPHHVVLKT*SHGRLSPLLFR Trigger: TCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | CTGAACGGTGCCAGAGGGCCATGGCCTGAGGTCCTTTaGGAAGAAGGACGCCCCAAATCTTCCTTTACATCT | + |
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Preference number: 3 (lower is better) Translates to: LNGARGPWPEVL*EEGRPKSSFTS Trigger: AGATGTAAAGGAAGATTTGGGGCGTCCTTCTTCCCAAAGGACCTCAGGCCATGGCCCTCTGGCACCGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | AGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTaGAAGGGGGAAGAGCCAATGCCTACTAGGCCATGC | + |
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Preference number: 3 (lower is better) Translates to: SLQMGFQFHRPF*KGEEPMPTRPC Trigger: GCATGGCCTAGTAGGCATTGGCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR-3UTR CAA 90 bp | GAATGCACAACGATGTTTTTATTGATGAGAAAGACGGTGGCCAGTCAGCCAGGACACCCCCACCCACGCTaGCAGACTTACGACGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ECTTMFLLMRKTVASQPGHPHPR*QTYDGL Trigger: GAGCCCGTCGTAAGTCTGCAAGCGTGGGTGGGGGTG...TCCTGGCTGACTGGCCACCGTCTTTCTCATCAATAAAAACATCGTTGTGCATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | AAACCACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTaGGCATTTCGTTCCAGAGCTATTTTTCTCGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: KPRCSCPRVLAR*AFRSRAIFLGF Trigger: AAACCCGAGAAAAATAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | ACTAAAAATACCAAGACAGAATCCAGTGGCCTGTGGTaGCTCCTGGACCACAGGAGGAAGATGGCAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: TKNTKTESSGLW*LLDHRRKMAGL Trigger: GAGGCCTGCCATCTTCCTCCTGTGGTCCAGGAGCCACCACAGGCCACTGGATTCTGTCTTGGTATTTTTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR CCA 72 bp | ACTACTAAAAATACCAAGACAGAATCCAGTGGCCTGTaGTGGCTCCTGGACCACAGGAGGAAGATGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: TTKNTKTESSGL*WLLDHRRKMAG Trigger: GCCTGCCATCTTCCTCCTGTGGTCCAGGAGCCACCACAGGCCACTGGATTCTGTCTTGGTATTTTTAGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| 3UTR TCA 72 bp | ATCTTCCTTTACATCTTACGCAATCCAGGAGTCATATaGAACCACGGTGCTCTTGCCCCAGGGTCCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IFLYILRNPGVI*NHGALAPGSWQ Trigger: TTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGTAAGATGTAAAGGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| 3UTR CCA 72 bp | GGTTATGAAGTGACAGCAGCTGCCTCAAGTCTGGGGTaGCACCAGAAACTACTAAAAATACCAAGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GYEVTAAASSLG*HQKLLKIPRQN Trigger: ATTCTGTCTTGGTATTTTTAGTAGTTTCTGGTGCCACCCCAGACTTGAGGCAGCTGCTGTCACTTCATAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | GCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCCAGTGGGCCCAGCCTaGGGGCTCTGCCACTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AATPESPSCGAEDLLPWSPVGPA*GLCHSR Trigger: TCGAGAGTGGCAGAGCCCGCAGGCTGGGCCCACTGG...CGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | TACCAAGACAGAATCCAGTGGCCTGTGGTGGCTCCTGGACCACAGGAGGAAGATGCATCCAGGGGCCAGTaGGCCCAGCCTGCGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQDRIQWPVVAPGPQEEDASRGQ*AQPAGS Trigger: AGAGCCCGCAGGCTGGGCCCACTGGCCCCTGGATGC...ATCTTCCTCCTGTGGTCCAGGAGCCACCACAGGCCACTGGATTCTGTCTTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| 3UTR CAA 72 bp | GGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTaGTCCTCCTGGCGCTCAGCTGACCACAGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGRRLQERRSV*SSWRSADHSSQ Trigger: CTGGCTACTGTGGTCAGCTGAGCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTTGTCCTCCTGGCGCATTGGGGACATGTCCTaGAGGTCCTCCAGCGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQGRRLQERRSVLSSWRIGDMS*RSSSDF Trigger: GAAGTCGCTGGAGGACCTGCAGGACATGTCCCCAAT...GCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGAGGGTGGAGGCTGGTTCGTGGCCCTTGCCCTTGCCCTGGGACTCCCACAGGAAGAAGAGCTGTaGAATGTCCACGATGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKEGGGWFVALALALGLPQEEEL*NVHDVA Trigger: AGCGACATCGTGGACATTCCACAGCTCTTCTTCCTG...TGGGAGTCCCAGGGCAAGGGCAAGGGCCACGAACCAGCCTCCACCCTCCTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | GCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGGCTGTCAGTGAAGACTaGCACCTCAGAGAGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AATPESPSCGAEDLLPWSAVSED*HLREGP Trigger: CGGCCCCTCTCTGAGGTGTCAGTCTTCACTGACAGC...CGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCAGCCTTTCTTCACCTTaGCTGTGCGGCCTGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCSHGRLSPLLFRGRASPSLSSP*LCGLCR Trigger: TCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCT...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTTCCAGTTCCACAGGAGACTaGACCTGCTGGGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPHPKMGKLSAFLVQPSSSTGD*TCWACR Trigger: CCTGCAGGCCCAGCAGGTGCAGTCTCCTGTGGAACT...GGAAGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CCCTCCACATCTGGACCAACAGCCTTCAGGTTCAGGGGCCCTAAACACCCAGCCTCCTCCGCACGTTGGTaGCACAGTGGATCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSTSGPTAFRFRGPKHPASSARW*HSGSLR Trigger: TCGGAGAGATCCACTGTGGCACCAACGTGCGGAGGA...GGCTGGGTGTTTAGGGCCCCTGAACCTGAAGGCTGTTGGTCCAGATGTGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGAGCTACCACGTAGAACTGGATaGCCCTCTCCCCAGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGALAPGSWQGGHFVPELPRRTG*PSPQNA Trigger: GGCATTCTGGGGAGAGGGCCATCCAGTTCTACGTGG...TAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTGAGAGAGAGCAGCCCTaGGAAACTGGCGTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPEREQP*ETGVGE Trigger: TTCCCCGACGCCAGTTTCTCAGGGCTGCTCTCTCTC...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | TCAACTTCCGGCCTTGACCCTCTCAGGGCTCTAGCTGGGAATGGGAGAAGGAAAAGCTCCAGGGGCGGCTaGGTGTTGGGGGTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: STSGLDPLRALAGNGRRKSSRGG*VLGVMI Trigger: GATCATGACCCCCAACACTCAGCCGCCCCTGGAGCT...TTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGAGGGTCAAGGCCGGAAGTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTTTCTCCTGGAACAGCTaGAGGCAGGCACTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPFSWNS*RQALGL Trigger: CAGCCCCAGTGCCTGCCTCCAGCTGTTCCAGGAGAA...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGAGCTATCTTCACCTTGCCTGTaGGGCCTGTGTCGACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGALAPGSWQGGHFVPELSSPCL*GLCRHQ Trigger: TTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGA...TAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTTCCGCACCTGTTTGTAGTTaGAGAGGGATGTCCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPHPKMGKLSAFLVQPSAPVCS*RGMSHP Trigger: GGGGTGGGACATCCCTCTCCAACTACAAACAGGTGC...GGAAGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTGCCTTTGTGGCCAGGTaGGACATGTCCTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPAFVAR*DMSSRN Trigger: GTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGC...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTTGTCCTCCTGGCGCCAGTCTTCTGGAATCTaGCAAAGATGCCTTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGQGRRLQERRSVLSSWRQSSGI*QRCLQD Trigger: GTCTTGAAGGCATCTTTGTCAGATTCCAGAAGACTG...GCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAAGAGCGGCTCACATCCAGGTTaGCGAAGGAATCCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAYKWGSSSTDPSGRGKSGSHPG*RRNPGQ Trigger: CTGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCC...GCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | AGTCATATGAAACCACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTACAGGAGACTGCACCTaGTGGGCCTGCAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHMKPRCSCPRVLARWAFTGDCT*WACRKS Trigger: TGACTTCCTGCAGGCCCAGCAGGTGCAGTCTCCTGT...AAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CACAACGATGTTTTTATTGATGAGAAAGACGGTGGCCAGTCAGCCAGGACCCCAGCCCACCCTCACCGGTaGGCTCACATCCAGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HNDVFIDEKDGGQSARTPAHPHR*AHIQVA Trigger: GGCAACCTGGATGTGAGCCCACCGGTGAGGGTGGGC...TGGGGTCCTGGCTGACTGGCCACCGTCTTTCTCATCAATAAAAACATCGTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGTGTTGTCCTCCTGGCGCTCAGCTGACCACAGTAGCCAGCCCACTTTCACGTTGGTGCCACAGTaGATCTCTCCGAGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSVLSSWRSADHSSQPTFTLVPQ*ISPSSW Trigger: CCAACTGCTCGGAGAGATCCACTGTGGCACCAACGT...GAAAGTGGGCTGGCTACTGTGGTCAGCTGAGCGCCAGGAGGACAACACACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| 3UTR CAA 72 bp | GCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTaGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPESPSCGAED*LPWSPVSSPLQ Trigger: CTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTAGGTCACGCTGTCAGTaGAGACTGACACCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPRSRCQ*RLTPQR Trigger: TCTCTGAGGTGTCAGTCTTCACTGACAGCGTGACCT...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTTGTCCTCCTGGCGCGTTGATGCTTCTTTTTaGCTTATGCTTGAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGQGRRLQERRSVLSSWRVDASF*LMLEAI Trigger: GATGGCCTCAAGCATAAGGCAAAAAGAAGCATCAAC...GCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CACGGTGCTCTTGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTCCAGAGCTAAGGTCTTGGCACCTTTaGGCACATCACTATAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: HGALAPGSWQGGHFVPELRSWHL*AHHYRR Trigger: ACGTCTATAGTGATGTGCCCAAAGGTGCCAAGACCT...TAGCTCTGGAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCCTGTCTACACCCCAAAGGTCTTaGCACCTTTGGGCACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSPHHVVLKTCSHGRLSTPQRS*HLWAHH Trigger: GTGATGTGCCCAAAGGTGCCAAGACCTTTGGGGTGT...AGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAAGAGCTGCAGTTGGCCTTTGTaGCCAGGTGGGACATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAYKWGSSSTDPSGRGKSCSWPL*PGGTCP Trigger: AGGACATGTCCCACCTGGCCACAAAGGCCAACTGCA...GCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| 3UTR CAA 72 bp | TACGCAATCCAGGAGTCATATGAAACCACGGTGCTCTaGCCCCAGGGTCCTGGCAAGGTGGGCATTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YAIQESYETTVL*PQGPGKVGISF Trigger: GAACGAAATGCCCACCTTGCCAGGACCCTGGGGCAAGAGCACCGTGGTTTCATATGACTCCTGGATTGCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAAGAGCGACAGACCACTAGTTTaGAGTTGGCCTTTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAYKWGSSSTDPSGRGKSDRPLV*SWPLWP Trigger: TGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTC...GCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | CCCTCCACATCTGGACCAACAGCCTTCAGGTTCAGGGGCCCTAAACACCCAGCCAGACCTTCAGTCTTCTaGAATCTGACAAAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTSGPTAFRFRGPKHPARPSVF*NLTKMP Trigger: AGGCATCTTTGTCAGATTCCAGAAGACTGAAGGTCT...GGCTGGGTGTTTAGGGCCCCTGAACCTGAAGGCTGTTGGTCCAGATGTGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CCA 90 bp | TCAACTTCCGGCCTTGACCCTCTCAGGGCTCTAGCTGGGAATGGGAGAAGGAAACCTTTTGGTCAGAGGTaGGCACGAAGCTCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: STSGLDPLRALAGNGRRKPFGQR*ARSSET Trigger: AGTTTCTGAGCTTCGTGCCCACCTCTGACCAAAAGG...TTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGAGGGTCAAGGCCGGAAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAAGAGCTTTTTGCCTTATGCTTaGGGCCATCAAACTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAYKWGSSSTDPSGRGKSFLPYA*GHQTAQ Trigger: CTGAGCAGTTTGATGGCCTCAAGCATAAGGCAAAAA...GCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAAGAGCGAAGGATTTGTGAGGTaGGTCAATGTAGCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAYKWGSSSTDPSGRGKSEGFVR*VNVAKL Trigger: GAGTTTGGCTACATTGACGCACCTCACAAATCCTTC...GCTCTTCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCCTGTCTCTTCTTTTTGCCTTATaGTTGAGGCCATCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSPHHVVLKTCSHGRLSLLFAL*LRPSNC Trigger: GCAGTTTGATGGCCTCAAGCATAAGGCAAAAAGAAG...AGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS TCA 90 bp | CTCTGGCCATCCGCCGCCCACTGGGCTTGGGGAAGCTGCCACCAATaGGGATTCTGCCGAGGGGGTAGTCTGTGTTGCCCACCCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LWPSAAHWAWGSCHQ*GFCRGGSLCCPPSP Trigger: CGGTGAGGGTGGGCAACACAGACTACCCCCTCGGCAGAATCCTCATTGGTGGCAGCTTCCCCAAGCCCAGTGGGCGGCGGATGGCCAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | CCCAAGGAGGGTGGAGGCTGGTTCGTGGCCCTTGCCCTTGCCCTGGGACTCCCATGGATCCAGCGATCGTaGCGATTCTCTGCCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKEGGGWFVALALALGLPWIQRS*RFSARG Trigger: TCCCCGGGCAGAGAATCGCAACGATCGCTGGATCCA...TGGGAGTCCCAGGGCAAGGGCAAGGGCCACGAACCAGCCTCCACCCTCCTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | GAGGATTCTGCCGAGGGGGTAGTCTGTGTTGCCCACCCTCACCGGTaGGCTCACATCCAGGTTGCCGAAGGAATCCAGGCCAGAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EDSAEGVVCVAHPHR*AHIQVAEGIQARGT Trigger: GGTGCCTCTGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCCACCGGTGAGGGTGGGCAACACAGACTACCCCCTCGGCAGAATCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | GAGGGTTGGGGGTGGGACAGCTCAAAGTGGGGCGTGGCTGCGGAGGCCACACCTGACACCCCAAAGGTCTaGGCACCTTTGGGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: EGWGWDSSKWGVAAEATPDTPKV*APLGTS Trigger: TGATGTGCCCAAAGGTGCCAAGACCTTTGGGGTGTC...AGGTGTGGCCTCCGCAGCCACGCCCCACTTTGAGCTGTCCCACCCCCAACCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | TACCACCACGTCCACGTTGGCATCCAGGGGCCAGTGGGCCCAGCCTaGGGGCTCTGCCACTCTCGAGGGATCGTAGACCATGTAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: YHHVHVGIQGPVGPA*GLCHSRGIVDHVDL Trigger: AAGATCTACATGGTCTACGATCCCTCGAGAGTGGCAGAGCCCGCAGGCTGGGCCCACTGGCCCCTGGATGCCAACGTGGACGTGGTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | TGGGCTCACATCCAGGTTGCCGAAGGAATCCAGGCCAGAGGCACCTaGGAACTCGATCTCCCGGGTCACATATCCAAAGTCAGGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WAHIQVAEGIQARGT*ELDLPGHISKVRTQ Trigger: CTGGGTCCTGACTTTGGATATGTGACCCGGGAGATCGAGTTCGCAGGTGCCTCTGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTTGTCCTCCTGGCGCGCCTTCAAGACCAGCTaGTGGCTCTCAAAAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGQGRRLQERRSVLSSWRAFKTS*WLSKSS Trigger: TGAGCTTTTTGAGAGCCACAAGCTGGTCTTGAAGGC...GCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCCTGTCTGGGCTCACATCCAGGTaGCCGAAGGAATCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSPHHVVLKTCSHGRLSGLTSR*PKESRP Trigger: TGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCC...AGACAGGCGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | GGCCCCAGCGCCAGGTTTTCTTGTCACCAGAGCCTTTCTTCACCTTaGCTGTGCGGCCTGTGTCGACATCAAGGGACACATCAACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSARFSCHQSLSSP*LCGLCRHQGTHQQQ Trigger: CTGCTGTTGATGTGTCCCTTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTCTGGTGACAAGAAAACCTGGCGCTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | TGGCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCATTaGGGCCGTGGATATCTGTCACGCTGCACACATACAGCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPLWPGGTCPPGTCH*GRGYLSRCTHTAPG Trigger: CCCTGGAGCTGTATGTGTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | GCCCGGGGACAGACCACTAGTTTGCAGTTGGCCTTTGTGGCCAGGTaGGACATGTCCTCCAGGAACTTGTCATTGCGGCCGTGGATATCT | + |
|
Preference number: 5 (lower is better) Translates to: ARGQTTSLQLAFVAR*DMSSRNLSLRPWIS Trigger: AGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | GATTCTCTGCCCGGGGACAGACCACTAGTTTGCAGTTGGCCTTTGTaGCCAGGTGGGACATGTCCTCCAGGAACTTGTCATTGCGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DSLPGDRPLVCSWPL*PGGTCPPGTCHCGR Trigger: ACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAGAGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | TCAACTTCCGGCCTTGACCCTCTCAGGGCTCTAGCTGGGAATGGGAGAAGGAAAGAGCCTTTCTTCACCTaGCCTGTGCGGCCTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: STSGLDPLRALAGNGRRKEPFFT*PVRPVS Trigger: CGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTC...TTTCCTTCTCCCATTCCCAGCTAGAGCCCTGAGAGGGTCAAGGCCGGAAGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | GCGGCAACTCCAGAGTCCCCATCATGTGGTGCTGAAGACTTGCTCCCATGGTCGCACAACTCAGCACCATaGGGGACATGTCCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AATPESPSCGAEDLLPWSHNSAP*GTCPAG Trigger: ACCTGCAGGACATGTCCCCAATGGTGCTGAGTTGTG...CGACCATGGGAGCAAGTCTTCAGCACCACATGATGGGGACTCTGGAGTTGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGAGCCTACAAATGGGGTTCCAGTTCCACAGACCCTTCTGGAAGGGGGAGAGGCGGAAGCCCTTTaGGTCAGAGGTGGGCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: CREPTNGVPVPQTLLEGGEAEAL*VRGGHE Trigger: TTCGTGCCCACCTCTGACCAAAAGGGCTTCCGCCTC...TCCCCCTTCCAGAAGGGTCTGTGGAACTGGAACCCCATTTGTAGGCTCTCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCAGGGCAGGCGACTCCAGGAACGAAGAAGTGTGTTGTCCTCCTGGCGCCTTTTTGCCTTATGCTaGAGGCCATCAAACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGQGRRLQERRSVLSSWRLFALC*RPSNCS Trigger: TGAGCAGTTTGATGGCCTCAAGCATAAGGCAAAAAG...GCGCCAGGAGGACAACACACTTCTTCGTTCCTGGAGTCGCCTGCCCTGCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | AGCTCATCAGGGCCACCACAACTCAGCACCATTGGGGACATGTCCTaGAGGTCCTCCAGCGACTTCAAATGGTTAGCATGCAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSGPPQLSTIGDMS*RSSSDFKWLACRSS Trigger: GGAAGACCTGCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGACATGTCCCCAATGGTGCTGAGTTGTGGTGGCCCTGATGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | GATCGTTGCGATTCTCTGCCCGGGGACAGACCACTAGTTTGCAGTTaGCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DRCDSLPGDRPLVCS*PLWPGGTCPPGTCH Trigger: ATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAGAGAATCGCAACGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTTCCAGGAACTTGTCATaGCGGCCGTGGATATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPSRNLS*RPWISV Trigger: GACAGATATCCACGGCCGCAATGACAAGTTCCTGGA...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | AGCGCCAGGTTTTCTTGTCACCAGAGCCTTTCTTCACCTTGCCTGTaGGGCCTGTGTCGACATCAAGGGACACATCAACAGCAGTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SARFSCHQSLSSPCL*GLCRHQGTHQQQLG Trigger: ACCTAACTGCTGTTGATGTGTCCCTTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTCTGGTGACAAGAAAACCTGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 90 bp | GGGGACATGTCCTGCAGGTCCTCCAGCGACTTCAAATGGTTAGCATaGAGGTCTTCCCTGGACCCATGGATATCTCTGTCACAGTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: GDMSCRSSSDFKWLA*RSSLDPWISLSQFT Trigger: GGTAAACTGTGACAGAGATATCCATGGGTCCAGGGAAGACCTGCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGACATGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | AGCACCATTGGGGACATGTCCTGCAGGTCCTCCAGCGACTTCAAATaGTTAGCATGCAGGTCTTCCCTGGACCCATGGATATCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: STIGDMSCRSSSDFK*LACRSSLDPWISLS Trigger: TGACAGAGATATCCATGGGTCCAGGGAAGACCTGCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGACATGTCCCCAATGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | TGGAGAGGGATGTCCCACCCCGGGCACAGAAGACCTTCAGTCTTCTaGAATCTGACAAAGATGCCTTCAAGACCAGCTTGTGGCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WRGMSHPGHRRPSVF*NLTKMPSRPACGSQ Trigger: TTGAGAGCCACAAGCTGGTCTTGAAGGCATCTTTGTCAGATTCCAGAAGACTGAAGGTCTTCTGTGCCCGGGGTGGGACATCCCTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGTTCCCCACCCCAAGATGGGCAAGCTCTCTGCTTTCCTGGTCCAACCTGATCTCTCCGAGCAGTaGGTGGTAAAAGAGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVPHPKMGKLSAFLVQPDLSEQ*VVKEKV Trigger: GACTTTCTCTTTTACCACCAACTGCTCGGAGAGATC...AGGTTGGACCAGGAAAGCAGAGAGCTTGCCCATCTTGGGGTGGGGAACCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS TCA 90 bp | GGATGTCCCACCCCGGGCACAGAAGACCTTCAGTCTTCTGGAATCTaGCAAAGATGCCTTCAAGACCAGCTTGTGGCTCTCAAAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCPTPGTEDLQSSGI*QRCLQDQLVALKKL Trigger: GAGCTTTTTGAGAGCCACAAGCTGGTCTTGAAGGCATCTTTGTCAGATTCCAGAAGACTGAAGGTCTTCTGTGCCCGGGGTGGGACATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 90 bp | CCATGTAGATCTTCACCTCAGAGCTCCCAGACACCCCAAAGGTCTTaGCACCTTTGGGCACATCACTATAGACGTTCACCAGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCRSSPQSSQTPQRS*HLWAHHYRRSPVSP Trigger: TGGAGACACTGGTGAACGTCTATAGTGATGTGCCCAAAGGTGCCAAGACCTTTGGGGTGTCTGGGAGCTCTGAGGTGAAGATCTACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTCCCATGGTCGCCTGTCTCCTCTCCTCTTCAGAGGTCGGGCATCGCCCTATGACACCTTCACCTaGAAGTCATATAAGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TCSHGRLSPLLFRGRASPYDTFT*KSYKSL Trigger: TAAGGACTTATATGACTTCAAGGTGAAGGTGTCATA...GGGCGATGCCCGACCTCTGAAGAGGAGAGGAGACAGGCGACCATGGGAGCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 72 bp | ACTACCACCACGTCCACGTTGGCATCCAGGGGCCAGTaGGCCCAGCCTGCGGGCTCTGCCACTCTCGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TTTTSTLASRGQ*AQPAGSATLEG Trigger: TCCCTCGAGAGTGGCAGAGCCCGCAGGCTGGGCCCACTGGCCCCTGGATGCCAACGTGGACGTGGTGGTAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CAA 72 bp | TTACTGACTGTGTCCGCCACTACCACCACGTCCACGTaGGCATCCAGGGGCCAGTGGGCCCAGCCTGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLTVSATTTTST*ASRGQWAQPAG Trigger: GCCCGCAGGCTGGGCCCACTGGCCCCTGGATGCCAACGTGGACGTGGTGGTAGTGGCGGACACAGTCAGTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | GCCGAGGGGGTAGTCTGTGTTGCCCACCCTCACCGGTaGGCTCACATCCAGGTTGCCGAAGGAATCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEGVVCVAHPHR*AHIQVAEGIQA Trigger: GGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCCACCGGTGAGGGTGGGCAACACAGACTACCCCCTCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS TCA 72 bp | TCCGCCGCCCACTGGGCTTGGGGAAGCTGCCACCAATaGGGATTCTGCCGAGGGGGTAGTCTGTGTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SAAHWAWGSCHQ*GFCRGGSLCCP Trigger: TGGGCAACACAGACTACCCCCTCGGCAGAATCCTCATTGGTGGCAGCTTCCCCAAGCCCAGTGGGCGGCGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | GGCATCCAGGGGCCAGTGGGCCCAGCCTGCGGGCTCTaGCACTCTCGAGGGATCGTAGACCATGTAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: GIQGPVGPACGL*HSRGIVDHVDL Trigger: AAGATCTACATGGTCTACGATCCCTCGAGAGTGGCAGAGCCCGCAGGCTGGGCCCACTGGCCCCTGGATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CAA 72 bp | GTGTTGCCCACCCTCACCGGTGGGCTCACATCCAGGTaGCCGAAGGAATCCAGGCCAGAGGCACCTGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VLPTLTGGLTSR*PKESRPEAPAN Trigger: GTTCGCAGGTGCCTCTGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCCACCGGTGAGGGTGGGCAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS TCA 72 bp | TGTGTCCACCAGGCTGACACTGAGAGAGAGCAGCCCTaGGAAACTGGCGTCGGGGAAGGCGAGCCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CVHQADTEREQP*ETGVGEGEPFH Trigger: GTGGAAGGGCTCGCCTTCCCCGACGCCAGTTTCTCAGGGCTGCTCTCTCTCAGTGTCAGCCTGGTGGACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | TGTTGCCCACCCTCACCGGTGGGCTCACATCCAGGTTaGCGAAGGAATCCAGGCCAGAGGCACCTGCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: CCPPSPVGSHPG*RRNPGQRHLRT Trigger: AGTTCGCAGGTGCCTCTGGCCTGGATTCCTTCGGCAACCTGGATGTGAGCCCACCGGTGAGGGTGGGCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | AGGAGCTGTGACGGGGCCCTAGCACCTGTTTGTAGTTaGAGAGGGATGTCCCACCCCGGGCACAGAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RSCDGALAPVCS*RGMSHPGHRRP Trigger: AGGTCTTCTGTGCCCGGGGTGGGACATCCCTCTCCAACTACAAACAGGTGCTAGGGCCCCGTCACAGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | CGTCGGGGAAGGCGAGCCCTTCCACGTAGAACTGGATaGCCCTCTCCCCAGAATGCCTTTCCACCTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRGRRALPRRTG*PSPQNAFPPHR Trigger: CCTATGAGGTGGAAAGGCATTCTGGGGAGAGGGCCATCCAGTTCTACGTGGAAGGGCTCGCCTTCCCCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | GGCTTCAGCGTAGGCTCCCTTCAGGAAGAAGAGCTGTaGAATGTCCACGATGTCGCTCTCGGAGAGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GFSVGSLQEEEL*NVHDVALGEAQ Trigger: CTGGGCCTCTCCGAGAGCGACATCGTGGACATTCCACAGCTCTTCTTCCTGAAGGGAGCCTACGCTGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 90 bp | GGGCCCCAGCGCCAGGTTTTCTTGTCACCAGAGCCTTTCTTCACCTaGCCTGTGCGGCCTGTGTCGACATCAAGGGACACATCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPQRQVFLSPEPFFT*PVRPVSTSRDTSTA Trigger: TGCTGTTGATGTGTCCCTTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTCTGGTGACAAGAAAACCTGGCGCTGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 90 bp | TGCGATTCTCTGCCCGGGGACAGACCACTAGTTTGCAGTTGGCCTTaGTGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCATTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CDSLPGDRPLVCSWP*WPGGTCPPGTCHCG Trigger: GCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAGAGAATCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 90 bp | ATCCAGCGATCGTTGCGATTCTCTGCCCGGGGACAGACCACTAGTTaGCAGTTGGCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: IQRSLRFSARGQTTS*QLAFVARWDMSSRN Trigger: GTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAGAGAATCGCAACGATCGCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | GGAACTTGTCATTGCGGCCGTGGATATCTGTCACGCTaGACACATACAGCTCCAGGGGCGGCTGAGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTCHCGRGYLSR*THTAPGAAECW Trigger: CCAACACTCAGCCGCCCCTGGAGCTGTATGTGTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | GCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAACTaGTCATTGCGGCCGTGGATATCTGTCACGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AFVARWDMSSRN*SLRPWISVTLH Trigger: GTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | CTGCCCGGGGACAGACCACTAGTTTGCAGTTGGCCTTaGTGGCCAGGTGGGACATGTCCTCCAGGAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPGDRPLVCSWP*WPGGTCPPGTC Trigger: ACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 90 bp | CGATCGTTGCGATTCTCTGCCCGGGGACAGACCACTAGTTTGCAGTaGGCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLRFSARGQTTSLQ*AFVARWDMSSRNLS Trigger: TGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGGCAGAGAATCGCAACGATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | GGGCCACCACAACTCAGCACCATTGGGGACATGTCCTaGAGGTCCTCCAGCGACTTCAAATGGTTAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPQLSTIGDMS*RSSSDFKWLAC Trigger: GCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGACATGTCCCCAATGGTGCTGAGTTGTGGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | AGCCAAACTCCAACTCGTCCTGGATCCAGCGATCGTTaGGATTCTCTGCCCGGGGACAGACCACTAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQTPTRPGSSDR*DSLPGDRPLVC Trigger: GCAAACTAGTGGTCTGTCCCCGGGCAGAGAATCGCAACGATCGCTGGATCCAGGACGAGTTGGAGTTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | ATCCAGGTTGCCGAAGGAATCCAGGCCAGAGGCACCTaGGAACTCGATCTCCCGGGTCACATATCCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IQVAEGIQARGT*ELDLPGHISKV Trigger: GACTTTGGATATGTGACCCGGGAGATCGAGTTCGCAGGTGCCTCTGGCCTGGATTCCTTCGGCAACCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | CAGACCACTAGTTTGCAGTTGGCCTTTGTGGCCAGGTaGGACATGTCCTCCAGGAACTTGTCATTGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QTTSLQLAFVAR*DMSSRNLSLRP Trigger: CGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | CCCGGGGACAGACCACTAGTTTGCAGTTGGCCTTTGTaGCCAGGTGGGACATGTCCTCCAGGAACTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGDRPLVCSWPL*PGGTCPPGTCH Trigger: ATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAAACTAGTGGTCTGTCCCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | GTGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCATaGCGGCCGTGGATATCTGTCACGCTGCACACATAC | + |
|
Preference number: 6 (lower is better) Translates to: VARWDMSSRNLS*RPWISVTLHTY Trigger: GTATGTGTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 90 bp | TTGCAGTTGGCCTTTGTGGCCAGGTGGGACATGTCCTCCAGGAACTaGTCATTGCGGCCGTGGATATCTGTCACGCTGCACACATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQLAFVARWDMSSRN*SLRPWISVTLHTYS Trigger: GCTGTATGTGTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCACAAAGGCCAACTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 72 bp | TGGCCAGGTGGGACATGTCCTCCAGGAACTTGTCATTaGGGCCGTGGATATCTGTCACGCTGCACACATACA | + |
|
Preference number: 6 (lower is better) Translates to: WPGGTCPPGTCH*GRGYLSRCTHT Trigger: TGTATGTGTGCAGCGTGACAGATATCCACGGCCGCAATGACAAGTTCCTGGAGGACATGTCCCACCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CCA 72 bp | GGGGACATGTCCTGCAGGTCCTCCAGCGACTTCAAATaGTTAGCATGCAGGTCTTCCCTGGACCCATGGATA | + |
|
Preference number: 6 (lower is better) Translates to: GDMSCRSSSDFK*LACRSSLDPWI Trigger: TATCCATGGGTCCAGGGAAGACCTGCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGACATGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | CGCCAGGTTTTCTTGTCACCAGAGCCTTTCTTCACCTaGCCTGTGCGGCCTGTGTCGACATCAAGGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: RQVFLSPEPFFT*PVRPVSTSRDT Trigger: TGTGTCCCTTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTCTGGTGACAAGAAAACCTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | CAAAAAGCTCATCAGGGCCACCACAACTCAGCACCATaGGGGACATGTCCTGCAGGTCCTCCAGCGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QKAHQGHHNSAP*GTCPAGPPATS Trigger: TGAAGTCGCTGGAGGACCTGCAGGACATGTCCCCAATGGTGCTGAGTTGTGGTGGCCCTGATGAGCTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 72 bp | CAGAGCTCCCAGACACCCCAAAGGTCTTGGCACCTTTaGGCACATCACTATAGACGTTCACCAGTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QSSQTPQRSWHL*AHHYRRSPVSP Trigger: TGGAGACACTGGTGAACGTCTATAGTGATGTGCCCAAAGGTGCCAAGACCTTTGGGGTGTCTGGGAGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS GCA 72 bp | TCCTGCAGGTCCTCCAGCGACTTCAAATGGTTAGCATaGAGGTCTTCCCTGGACCCATGGATATCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRSSSDFKWLA*RSSLDPWISLS Trigger: TGACAGAGATATCCATGGGTCCAGGGAAGACCTGCATGCTAACCATTTGAAGTCGCTGGAGGACCTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS GCA 72 bp | TTTTCTTGTCACCAGAGCCTTTCTTCACCTTGCCTGTaGGGCCTGTGTCGACATCAAGGGACACATCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: FSCHQSLSSPCL*GLCRHQGTHQQ Trigger: CTGTTGATGTGTCCCTTGATGTCGACACAGGCCGCACAGGCAAGGTGAAGAAAGGCTCTGGTGACAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 72 bp | ATGTCCCACCCCGGGCACAGAAGACCTTCAGTCTTCTaGAATCTGACAAAGATGCCTTCAAGACCAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: MSHPGHRRPSVF*NLTKMPSRPAC Trigger: ACAAGCTGGTCTTGAAGGCATCTTTGTCAGATTCCAGAAGACTGAAGGTCTTCTGTGCCCGGGGTGGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
||
| CDS CCA 72 bp | CTGGAATCTGACAAAGATGCCTTCAAGACCAGCTTGTaGCTCTCAAAAAGCTCATCAGGGCCACCACAACTC | + |
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Preference number: 6 (lower is better) Translates to: LESDKDAFKTSL*LSKSSSGPPQL Trigger: GAGTTGTGGTGGCCCTGATGAGCTTTTTGAGAGCCACAAGCTGGTCTTGAAGGCATCTTTGTCAGATTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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| CDS CAA 72 bp | GCAGCCTCCTGTGACTCAAAGTATGACACCTTCACCTaGAAGTCATATAAGTCCTTACTGACTGTGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AASCDSKYDTFT*KSYKSLLTVSA Trigger: GGCGGACACAGTCAGTAAGGACTTATATGACTTCAAGGTGAAGGTGTCATACTTTGAGTCACAGGAGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026378.4 |
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