Pregenerated sensors for PABPN1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069867Ensembl transcript IDs: ENSMUST00000093059.3, ENSMUST00000212966.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTaGCAGGCTAGGAGCCCCATCTGGAGGGAGTGGAGACAGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HWDLVIWAPSKALGG*QARSPIWREWRQQF Trigger: AAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCTAGCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR CCA 90 bp | GCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCTAGGAGCCCCATCTaGAGGGAGTGGAGACAGCAGTTTACTCCTGGTCCCGCTTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: APSKALGGCQARSPI*REWRQQFTPGPALK Trigger: TTTTAAAGCGGGACCAGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCTAGCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCTAGGAGCCCCATCTaGAGGGAGTGGAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SHWDLVIWAPSKALGGCQARSPI*REWRQQ Trigger: CTGCTGTCTCCACTCCCTCCAGATGGGGCTCCTAGC...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGGCTAGGAGCCCCATCTaGAGGGAGTGGAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SAFPLGPGDLGTFKGPWGARSPI*REWRQQ Trigger: CTGCTGTCTCCACTCCCTCCAGATGGGGCTCCTAGC...CCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGCCCATCTGGAGGGAGTaGAGACAGCAGTTTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SHWDLVIWAPSKALGGCQPIWRE*RQQFTP Trigger: AGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGG...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTCCCATCTGGAGGGAGTaGAGACAGCAGTTTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPPIWRE*RQQFTP Trigger: AGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGG...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR TCA 72 bp | CCCCTCCCTGCCCAGTGCCTTCCCACTGGGACCTGGTaGTCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PLPAQCLPTGTW*SGHLQRPLGAA Trigger: GGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAGGGAGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR GCA 72 bp | CTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTaGCAGGCTAGGAGCCCCATCTGGAGGGAGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LVIWAPSKALGG*QARSPIWREWR Trigger: TCTCCACTCCCTCCAGATGGGGCTCCTAGCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| 3UTR CCA 72 bp | AAGGCCCTTGGGGGCTGCCAGGCTAGGAGCCCCATCTaGAGGGAGTGGAGACAGCAGTTTACTCCTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: KALGGCQARSPI*REWRQQFTPGP Trigger: GGGACCAGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCTAGCCTGGCAGCCCCCAAGGGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | CAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCTTGGGCCTCAGGATCTaGGGAGACCGTCTGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QSQHTLSLPPLPPLPAQCLGLRI*GDRLEP Trigger: TGGCTCCAGACGGTCTCCTCAGATCCTGAGGCCCAA...GCACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | CCAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCACGGTCTGTGGAGCTaGTGCCTGGGAAGTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: PIPAYPEPSSPPSPPCPVHGLWS*CLGSSS Trigger: GGACGAACTTCCCAGGCATCAGCTCCACAGACCGTG...CACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGCAGGGTGGCTCCGGCTaGGCTTCAGCATGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHWDLVIWAPSKALGGCQQGGSG*ASACSM Trigger: CATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTG...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCTCAGGGTGGCTCCGGCTaGGCTTCAGCATGCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: HWDLVIWAPSKALGGCQAQGGSG*ASACSM Trigger: CATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTG...AGCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | CACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCTTCTCCCCACAGGGACTaGAGTAGGCCTCCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HWDLVIWAPSKALGGCQASPHRD*SRPPAL Trigger: CAGAGCTGGAGGCCTACTTCAGTCCCTGTGGGGAGA...AGCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR GCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGCGATGGAGGCTACCGTaGAGGAAGGCAGCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SHWDLVIWAPSKALGGCQRWRLP*RKAALL Trigger: CAACAGGGCTGCCTTCCTGCACGGTAGCCTCCATCG...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTCACGGTCTGTGGAGCTaGTGCCTGGGAAGTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPHGLWS*CLGSSS Trigger: GGACGAACTTCCCAGGCATCAGCTCCACAGACCGTG...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGTCAGGCCCCTCTGGTTaGATACTGGGGACTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SHWDLVIWAPSKALGGCQSGPSG*ILGTWP Trigger: TGGCCAAGTCCCCAGTATTCAACCAGAGGGGCCTGA...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS-3UTR GCA 90 bp | AGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGAGAGAACCACTGTGGTaGTCCTCCATGGCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SAFPLGPGDLGTFKGPWGREPLW*SSMAPA Trigger: AGCCGGGGCCATGGAGGAGCACCACAGTGGTTCTCT...CCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTAGAGAACCACTGTGGTaGTCCTCCATGGCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPREPLW*SSMAPA Trigger: AGCCGGGGCCATGGAGGAGCACCACAGTGGTTCTCT...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTCTGAGGAGACCGTCTaGAGCCAGGCTTCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPSEETV*SQASVG Trigger: CCCCACTGAAGCCTGGCTCCAGACGGTCTCCTCAGA...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCGCCTTCAGGCCCCTCTaGTTGAATACTGGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: QSQHTLSLPPLPPLPAQCAFRPL*LNTGDL Trigger: CAAGTCCCCAGTATTCAACCAGAGGGGCCTGAAGGC...GCACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CCAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGTGTGGAGCTGATGCCTaGGAAGTTCGTCCTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PIPAYPEPSSPPSPPCPVCGADA*EVRPFG Trigger: CCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACA...CACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | AGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCCCACAGTTTCAGCTTaGTGGCCTCCAACTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SAFPLGPGDLGTFKGPWGPTVSA*WPPTPG Trigger: ACCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGG...CCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS-3UTR TCA 90 bp | CCCTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTCCAGCTCTGCAGCTaGGCCACCATAATCCACATT | + |
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Preference number: 4 (lower is better) Translates to: PCPVPSHWDLVIWAPSKALQLCS*ATIIHI Trigger: AATGTGGATTATGGTGGCTCAGCTGCAGAGCTGGAG...GGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGTGTGGAGCTGATGCCTaGGAAGTTCGTCCTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SHWDLVIWAPSKALGGCQCGADA*EVRPFG Trigger: CCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACA...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTCCCACAGTTTCAGCTTaGTGGCCTCCAACTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPPTVSA*WPPTPV Trigger: AACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGG...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCCATCTGGAGGGAGTGGAGACAGCAGTTTACTCCTGGTCCCGCTTTATCTGAGGAGACCGTCTaGAGCCAGGCTTCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RSPIWREWRQQFTPGPALSEETV*SQASVG Trigger: CCCCACTGAAGCCTGGCTCCAGACGGTCTCCTCAGA...TAAAGCGGGACCAGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTCCCTCTCTTCCTCTGTaGCCTTTCTCTGTACACAGG | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPPSLPL*PFSVHR Trigger: CCTGTGTACAGAGAAAGGCCACAGAGGAAGAGAGGG...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCACAAAGACAGATCTGTaGTCAGCCTCCACATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSQHTLSLPPLPPLPAQCTKTDL*SASTFS Trigger: GGAAAATGTGGAGGCTGACCACAGATCTGTCTTTGT...GCACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCTATATGCATAGCCCTTaGGGTGTCCAGAGAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: QSQHTLSLPPLPPLPAQCYMHSP*GVQRTC Trigger: ACAAGTTCTCTGGACACCCCAAGGGCTATGCATATA...GCACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | GTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTATATGCATAGCCCTTaGGGTGTCCAGAGAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VPSHWDLVIWAPSKALGGYMHSP*GVQRTC Trigger: ACAAGTTCTCTGGACACCCCAAGGGCTATGCATATA...GCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCCCCATCTGGAGGGAGTGGAGACAGCAGTTTACTCCTGGTCCCGCTTTACTCCAGCTCTGCAGCTaGGCCACCATAATCCACATT | + |
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Preference number: 4 (lower is better) Translates to: RSPIWREWRQQFTPGPALLQLCS*ATIIHI Trigger: AATGTGGATTATGGTGGCTCAGCTGCAGAGCTGGAG...TAAAGCGGGACCAGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTACAAAGACAGATCTGTaGTCAGCCTCCACATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPTKTDL*SASTFS Trigger: GGAAAATGTGGAGGCTGACCACAGATCTGTCTTTGT...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR GCA 90 bp | ACATATCTATTTTTCTTTAAAAGTACTCGAGAATGCCAATCCCAGCATACCCTGCGATGGAGGCTACCGTaGAGGAAGGCAGCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TYLFFFKSTRECQSQHTLRWRLP*RKAALL Trigger: CAACAGGGCTGCCTTCCTGCACGGTAGCCTCCATCG...CAGGGTATGCTGGGATTGGCATTCTCGAGTACTTTTAAAGAAAAATAGATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS-3UTR CAA 90 bp | CCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCGCCCACAGTTTCAGCTaGATGGCCTCCAACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLGPGDLGTFKGPWGLPGAHSFS*MASNSW Trigger: CCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGC...GCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS-3UTR CAA 90 bp | CCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGCAGCCCCACAGCAGCCTaGACAGATCTGTGCGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: PLGPGDLGTFKGPWGLPGSPTAA*TDLCEA Trigger: TGCTTCGCACAGATCTGTCAAGGCTGCTGTGGGGCT...GCCTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | CAATCCCAGCATACCCTGAGCCTTCCTCCCCTCCCTCCCCTCCCTGCCCAGTGCCTCTACTCCCAGCCCTaGGCACCAAGGAGGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: QSQHTLSLPPLPPLPAQCLYSQP*APRRSF Trigger: AAAAGACCTCCTTGGTGCCAAGGGCTGGGAGTAGAG...GCACTGGGCAGGGAGGGGAGGGAGGGGAGGAAGGCTCAGGGTATGCTGGGATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGAGCCCCACAGCAGCCTaGACAGATCTGTGCGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SHWDLVIWAPSKALGGCQSPTAA*TDLCEA Trigger: TGCTTCGCACAGATCTGTCAAGGCTGCTGTGGGGCT...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 90 bp | GCCCGAGTGTGTCCGCAGCCCTCCACGGTCTGTGGAGCTGATGCCTaGGAAGTTCGTCCTTTTGGGAAGTACCTTGATGACCCGACCTCG | + |
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Preference number: 5 (lower is better) Translates to: ARVCPQPSTVCGADA*EVRPFGKYLDDPTS Trigger: CGAGGTCGGGTCATCAAGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACAGACCGTGGAGGGCTGCGGACACACTCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 90 bp | GGAGAGAACCACTGTGGTGCTCCTCCATGGCCCCGGCTCCGTCCATaGGCTCTTAACCGAGCTTTTCGATGGAGGCTACCGTGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GENHCGAPPWPRLRP*ALNRAFRWRLPCRK Trigger: CTTCCTGCACGGTAGCCTCCATCGAAAAGCTCGGTTAAGAGCCCATGGACGGAGCCGGGGCCATGGAGGAGCACCACAGTGGTTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | TCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCTGCCAGGGGTGTCCAGAGAACTaGTCGCACAGGATAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: SHWDLVIWAPSKALGGCQGCPEN*SHRIVT Trigger: GGTCACTATCCTGTGCGACAAGTTCTCTGGACACCC...CTGGCAGCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTTCAGGCCCCTCTGGTaGAATACTGGGGACTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPSAFPLGPGDLGTFKGPFRPLW*NTGDLA Trigger: GGCCAAGTCCCCAGTATTCAACCAGAGGGGCCTGAA...AGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCGCCCACAGTTTCAGCTaGATGGCCTCCAACTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: VPSHWDLVIWAPSKALGGAHSFS*MASNSC Trigger: ACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGC...GCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS GCA 90 bp | GTGGCCTTTCTCTGTACACAGGGTGGCTCCGGCTGGGCTTCAGCATaGTCCATGGCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VAFLCTQGGSGWASA*SMAHSFSLMASNSW Trigger: CCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAGAAAGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS-3UTR CAA 90 bp | CCTCCCTGCCCAGTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGGGTGTCCAGAGAACTaGTCGCACAGGATAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: PPCPVPSHWDLVIWAPSKGCPEN*SHRIVT Trigger: GGTCACTATCCTGTGCGACAAGTTCTCTGGACACCC...CTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCACTGGGCAGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS GCA 90 bp | GTGGCCTTTCTCTGTACACAGGGTGGCTCCGGCTGGGCTTCAGCATaGTCCATGGCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: VAFLCTQGGSGWASA*SMAHSFSLMASNSC Trigger: ACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAGAAAGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS CCA 90 bp | CTCTCTTCCTCTGTGGCCTTTCTCTGTACACAGGGTGGCTCCGGCTaGGCTTCAGCATGCTCCATGGCCCACAGTTTCAGCTTGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSSSVAFLCTQGGSG*ASACSMAHSFSLMA Trigger: GGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAGAAAGGCCACAGAGGAAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTTCCCACTGGGACCTGGTGATCTGGGCACCTTCAAAGGCCCTTGGGGGCGCCTCCACATTTTCCTaGGAGGTCCTAGAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPSHWDLVIWAPSKALGGASTFS*EVLEKK Trigger: CTTCTTCTCTAGGACCTCCAAGGAAAATGTGGAGGC...GCCCCCAAGGGCCTTTGAAGGTGCCCAGATCACCAGGTCCCAGTGGGAAGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS TCA 90 bp | GCTCCGGCTGGGCTTCAGCATGCTCCATGGCCCACAGTTTCAGCTTaGTGGCCTCCAACTCCTGTTGGCCACGCCACAGTAAGTTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: APAGLQHAPWPTVSA*WPPTPVGHATVSLR Trigger: TCTCAAACTTACTGTGGCGTGGCCAACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS CCA 90 bp | TGCTCCATGGCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTGTTaGCCACGCCACAGTAAGTTTGAGATGGCCTTCAGGCCCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSMAHSFSLMASNSC*PRHSKFEMAFRPLW Trigger: CCAGAGGGGCCTGAAGGCCATCTCAAACTTACTGTGGCGTGGCCAACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCCCCATCTGGAGGGAGTGGAGACAGCAGTTTACTCCTGGTCCCGCTTTAGCCTCCAACTCCTGGTaGAATACTGGGGACTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RSPIWREWRQQFTPGPALASNSW*NTGDLA Trigger: GGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGC...TAAAGCGGGACCAGGAGTAAACTGCTGTCTCCACTCCCTCCAGATGGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS CCA 90 bp | GCATGCTCCATGGCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTaGTTGAATACTGGGGACTTGGCCAGGTTCTCTGGTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACSMAHSFSLMASNS*LNTGDLARFSGSSR Trigger: CCTGCTGGAACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS TCA 90 bp | GTGAATCTCCCCACAGGGACTGAAGTAGGCCTCCAGCTCTGCAGCTaGGCCACCATAATCCACATTGCCTACAAAGACAGATCTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNLPTGTEVGLQLCS*ATIIHIAYKDRSVV Trigger: GACCACAGATCTGTCTTTGTAGGCAATGTGGATTATGGTGGCTCAGCTGCAGAGCTGGAGGCCTACTTCAGTCCCTGTGGGGAGATTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS GCA 90 bp | CCCCACAGCAGCCTTGACAGATCTGTGCGAAGCAAACTCTATATATaGATAGCCCTTGGGGTGTCCAGAGAACTTGTCGCACAGGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHSSLDRSVRSKLYI*IALGVSRELVAQDS Trigger: ACTATCCTGTGCGACAAGTTCTCTGGACACCCCAAGGGCTATGCATATATAGAGTTTGCTTCGCACAGATCTGTCAAGGCTGCTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS-3UTR CAA 90 bp | ACATATCTATTTTTCTTTAAAAGTACTCGAGAATGCCAATCCCAGCATACCCTGCTCTACTCCCAGCCCTaGGCACCAAGGAGGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TYLFFFKSTRECQSQHTLLYSQP*APRRSF Trigger: AAAAGACCTCCTTGGTGCCAAGGGCTGGGAGTAGAG...CAGGGTATGCTGGGATTGGCATTCTCGAGTACTTTTAAAGAAAAATAGATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS CAA 72 bp | TTTCGATGGAGGCTACCGTGCAGGAAGGCAGCCCTGTaGCCCGAGTGTGTCCGCAGCCCTCCACGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FRWRLPCRKAAL*PECVRSPPRSV Trigger: CACAGACCGTGGAGGGCTGCGGACACACTCGGGCAACAGGGCTGCCTTCCTGCACGGTAGCCTCCATCGAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CAA 90 bp | AACCGAGCTTTTCGATGGAGGCTACCGTGCAGGAAGGCAGCCCTGTaGCCCGAGTGTGTCCGCAGCCCTCCACGGTCTGTGGAGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: NRAFRWRLPCRKAAL*PECVRSPPRSVELM Trigger: CATCAGCTCCACAGACCGTGGAGGGCTGCGGACACACTCGGGCAACAGGGCTGCCTTCCTGCACGGTAGCCTCCATCGAAAAGCTCGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | CACTGTGGTGCTCCTCCATGGCCCCGGCTCCGTCCATaGGCTCTTAACCGAGCTTTTCGATGGAGGCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: HCGAPPWPRLRP*ALNRAFRWRLP Trigger: CGGTAGCCTCCATCGAAAAGCTCGGTTAAGAGCCCATGGACGGAGCCGGGGCCATGGAGGAGCACCACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS GCA 72 bp | CTCTGTACACAGGGTGGCTCCGGCTGGGCTTCAGCATaGTCCATGGCCCACAGTTTCAGCTTGATGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCTQGGSGWASA*SMAHSFSLMAS Trigger: GGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS GCA 72 bp | TGGGCTCTTAACCGAGCTTTTCGATGGAGGCTACCGTaGAGGAAGGCAGCCCTGTTGCCCGAGTGTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: WALNRAFRWRLP*RKAALLPECVR Trigger: GCGGACACACTCGGGCAACAGGGCTGCCTTCCTGCACGGTAGCCTCCATCGAAAAGCTCGGTTAAGAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | CCTCTCTTCCTCTGTGGCCTTTCTCTGTACACAGGGTaGCTCCGGCTGGGCTTCAGCATGCTCCATGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PLFLCGLSLYTG*LRLGFSMLHGP Trigger: TGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAGAAAGGCCACAGAGGAAGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CAA 90 bp | GGCTCCGGCTGGGCTTCAGCATGCTCCATGGCCCACAGTTTCAGCTaGATGGCCTCCAACTCCTGGTTGAATACTGGGGACTTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGWASACSMAHSFS*MASNSWLNTGDLAR Trigger: CCTGGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS TCA 72 bp | CCGAGTGTGTCCGCAGCCCTCCACGGTCTGTGGAGCTaGTGCCTGGGAAGTTCGTCCTTTTGGGAAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: PSVSAALHGLWS*CLGSSSFWEVP Trigger: AGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACAGACCGTGGAGGGCTGCGGACACACTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | TCTGTGGCCTTTCTCTGTACACAGGGTGGCTCCGGCTaGGCTTCAGCATGCTCCATGGCCCACAGTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVAFLCTQGGSG*ASACSMAHSFS Trigger: GCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCCACCCTGTGTACAGAGAAAGGCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CAA 90 bp | GGCTCCGGCTGGGCTTCAGCATGCTCCATGGCCCACAGTTTCAGCTaGATGGCCTCCAACTCCTGTTGGCCACGCCACAGTAAGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSGWASACSMAHSFS*MASNSCWPRHSKFE Trigger: CTCAAACTTACTGTGGCGTGGCCAACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCATGGAGCATGCTGAAGCCCAGCCGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS CAA 90 bp | TGGCCACGCCACAGTAAGTTTGAGATGGCCTTCAGGCCCCTCTGGTaGAATACTGGGGACTTGGCCAGGTTCTCTGGTTCCAGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WPRHSKFEMAFRPLW*NTGDLARFSGSSRE Trigger: CTCCCTGCTGGAACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGAGGGGCCTGAAGGCCATCTCAAACTTACTGTGGCGTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS CAA 72 bp | CTGCTTCCTTGTCACTTCCTGCTCTACTCCCAGCCCTaGGCACCAAGGAGGTCTTTTCAGTCCTGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLPCHFLLYSQP*APRRSFQSCPR Trigger: CCTGGGGCAGGACTGAAAAGACCTCCTTGGTGCCAAGGGCTGGGAGTAGAGCAGGAAGTGACAAGGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CAA 90 bp | TCTGTGGAGCTGATGCCTGGGAAGTTCGTCCTTTTGGGAAGTACCTaGATGACCCGACCTCGGAAGGTGCTCTCATCCAGCCCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVELMPGKFVLLGST*MTRPRKVLSSSPTA Trigger: TGCTGTGGGGCTGGATGAGAGCACCTTCCGAGGTCGGGTCATCAAGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | TGTCCGCAGCCCTCCACGGTCTGTGGAGCTGATGCCTaGGAAGTTCGTCCTTTTGGGAAGTACCTTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: CPQPSTVCGADA*EVRPFGKYLDD Trigger: GTCATCAAGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACAGACCGTGGAGGGCTGCGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CAA 72 bp | CGGTCTGTGGAGCTGATGCCTGGGAAGTTCGTCCTTTaGGGAAGTACCTTGATGACCCGACCTCGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSVELMPGKFVL*GSTLMTRPRKV Trigger: CACCTTCCGAGGTCGGGTCATCAAGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAGCTCCACAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | GCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTGTTaGCCACGCCACAGTAAGTTTGAGATGGCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AHSFSLMASNSC*PRHSKFEMAFR Trigger: CCTGAAGGCCATCTCAAACTTACTGTGGCGTGGCCAACAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS CAA 72 bp | GCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTGGTaGAATACTGGGGACTTGGCCAGGTTCTCTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AHSFSLMASNSW*NTGDLARFSGS Trigger: GGAACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS CAA 72 bp | CTGATGCCTGGGAAGTTCGTCCTTTTGGGAAGTACCTaGATGACCCGACCTCGGAAGGTGCTCTCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LMPGKFVLLGST*MTRPRKVLSSS Trigger: GCTGGATGAGAGCACCTTCCGAGGTCGGGTCATCAAGGTACTTCCCAAAAGGACGAACTTCCCAGGCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS TCA 72 bp | CCCACAGGGACTGAAGTAGGCCTCCAGCTCTGCAGCTaGGCCACCATAATCCACATTGCCTACAAAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: PTGTEVGLQLCS*ATIIHIAYKDR Trigger: TCTGTCTTTGTAGGCAATGTGGATTATGGTGGCTCAGCTGCAGAGCTGGAGGCCTACTTCAGTCCCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS CCA 72 bp | TTTCAGCTTGATGGCCTCCAACTCCTGGTTGAATACTaGGGACTTGGCCAGGTTCTCTGGTTCCAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: FQLDGLQLLVEY*GLGQVLWFQQG Trigger: TCCCTGCTGGAACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGCCATCAAGCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS CCA 72 bp | ATGGCCCACAGTTTCAGCTTGATGGCCTCCAACTCCTaGTTGAATACTGGGGACTTGGCCAGGTTCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MAHSFSLMASNS*LNTGDLARFSG Trigger: ACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGGAGTTGGAGGCCATCAAGCTGAAACTGTGGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093059.3 |
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| CDS TCA 72 bp | ACAGTAAGTTTGAGATGGCCTTCAGGCCCCTCTGGTTaGATACTGGGGACTTGGCCAGGTTCTCTGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSLRWPSGPSG*ILGTWPGSLVP Trigger: TGGAACCAGAGAACCTGGCCAAGTCCCCAGTATTCAACCAGAGGGGCCTGAAGGCCATCTCAAACTTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212966.2 |
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| CDS GCA 72 bp | CCTCCAGCTCTGCAGCTGAGCCACCATAATCCACATTaGCTACAAAGACAGATCTGTGGTCAGCCTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PPALQLSHHNPH*LQRQICGQPPH Trigger: ATGTGGAGGCTGACCACAGATCTGTCTTTGTAGGCAATGTGGATTATGGTGGCTCAGCTGCAGAGCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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| CDS GCA 72 bp | AGCCTTGACAGATCTGTGCGAAGCAAACTCTATATATaGATAGCCCTTGGGGTGTCCAGAGAACTTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: SLDRSVRSKLYI*IALGVSRELVA Trigger: TGCGACAAGTTCTCTGGACACCCCAAGGGCTATGCATATATAGAGTTTGCTTCGCACAGATCTGTCAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093059.3 ENSMUST00000212966.2 |
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