Pregenerated sensors for PABPC4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090919Ensembl transcript IDs: ENSMUST00000166505.7, ENSMUST00000192793.6, ENSMUST00000195436.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATACGTGGGGGAGGAGTAGAGATACTGGCTGAAGGCATTTCTGTTTaGATTAGCTTTGATTTATTAATGAAGCAAAGATTGTCTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: IRGGGVEILAEGISV*ISFDLLMKQRLSFL Trigger: TAAGAAAGACAATCTTTGCTTCATTAATAAATCAAAGCTAATCCAAACAGAAATGCCTTCAGCCAGTATCTCTACTCCTCCCCCACGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTGAACTTTGGCTTGGATaGATTAACTCAGAAGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: HICRNMSQGQEQTQTQHSELWLG*INSEVQ Trigger: TTGCACTTCTGAGTTAATCCATCCAAGCCAAAGTTC...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCTATCGTTCTCCTAGCTaGTTCTCAGATTGCGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: EALQSHPYFSRVWESWKTYRSPS*FSDCEV Trigger: TACCTCGCAATCTGAGAAGCAGCTAGGAGAACGATA...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTTCAGCATCTAGTGAATaGCTAAAATTGCATCACATT | + |
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Preference number: 2 (lower is better) Translates to: HICRNMSQGQEQTQTQHSSASSE*LKLHHI Trigger: AATGTGATGCAATTTTAGGCATTCACTAGATGCTGA...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCATTTCCTTGCACGATTaGAGTAAATTAAGCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EALQSHPYFSRVWESWKTISLHD*SKLSSH Trigger: GTGGCTGCTTAATTTACTGCAATCGTGCAAGGAAAT...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCGCAGAAGAAATAACATaGGTTTTCCAACCTTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: EALQSHPYFSRVWESWKTAEEIT*VFQPLV Trigger: TACCAAAGGTTGGAAAACTCATGTTATTTCTTCTGC...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATATCGTTCTCCTAGCTaGTTCTCAGATTGCGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: FVRKPSQILACQTLIYKAYRSPS*FSDCEV Trigger: TACCTCGCAATCTGAGAAGCAGCTAGGAGAACGATA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR TCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAAGTAGAGATACTGGCTaGAGGCATTTCTGTTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: FVRKPSQILACQTLIYKASRDTG*RHFCLD Trigger: ATCCAAACAGAAATGCCTTCAGCCAGTATCTCTACT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAAGAGTTTGGGAATCATaGAAAACCCATTGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FVRKPSQILACQTLIYKARVWES*KTHWPK Trigger: CTTTGGCCAATGGGTTTTCCATGATTCCCAAACTCT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTATTTCCTTGCACGATTaGAGTAAATTAAGCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: MMKILIKVEILQANEFECISLHD*SKLSSH Trigger: GTGGCTGCTTAATTTACTGCAATCGTGCAAGGAAAT...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR GCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTAGGAGTTGGGAAGAATaGGTACCTTCAAGTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: MMKILIKVEILQANEFECRSWEE*VPSSYL Trigger: AAGATAACTTGAAGGTACGCATTCTTCCCAACTCCT...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTCATATCAATAGGAGTTaGGAAGAATGCGTACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: MMKILIKVEILQANEFECHINRS*EECVPS Trigger: TGAAGGTACGCATTCTTCCCAACTCCTATTGATATG...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATATTTCTCAAGAGTTTaGGAATCATGGAAAACCCAT | + |
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Preference number: 2 (lower is better) Translates to: FVRKPSQILACQTLIYKAYFSRV*ESWKTH Trigger: ATGGGTTTTCCATGATTCCCAAACTCTTGAGAAATA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTTGTCCTTGGACAATATaGAAATGTGCATTTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: MMKILIKVEILQANEFECCPWTI*KCAFAY Trigger: ATAGGCAAATGCACATTTCCATATTGTCCAAGGACA...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATTCAAAATCTGTCTTTaGGACAGCTTTACAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: FVRKPSQILACQTLIYKAFKICL*DSFTNC Trigger: ACAGTTTGTAAAGCTGTCCCAAAGACAGATTTTGAA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTTTCAAAATCTGTCTTTaGGACAGCTTTACAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: MMKILIKVEILQANEFECFKICL*DSFTNC Trigger: ACAGTTTGTAAAGCTGTCCCAAAGACAGATTTTGAA...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR GCA 72 bp | GTGAGGAAGTTATTCCCCATCTTAAGGCACCTAGAATaGCAATCTTATCTCAGGTTGGCTGTGAACAGCATG | + |
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Preference number: 3 (lower is better) Translates to: VRKLFPILRHLE*QSYLRLAVNSM Trigger: CATGCTGTTCACAGCCAACCTGAGATAAGATTGGCATTCTAGGTGCCTTAAGATGGGGAATAACTTCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTCGTATAGACATTTCCTaGCACGATTGCAGTAAATTA | + |
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Preference number: 3 (lower is better) Translates to: HICRNMSQGQEQTQTQHSRIDIS*HDCSKL Trigger: TAATTTACTGCAATCGTGCAAGGAAATGTCTATACG...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CCA 72 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTaGGAATCATGGAAAACCCATTGGCCAAAGTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: EALQSHPYFSRV*ESWKTHWPKSK Trigger: TTTTGACTTTGGCCAATGGGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAATCATGGAAAACCCATaGGCCAAAGTCAAAAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FVRKPSQILACQTLIYKAIMENP*AKVKSP Trigger: GGGGCTTTTGACTTTGGCCAATGGGTTTTCCATGAT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATACCTTCAAGTTATCTaGGCAGAAGTCAAGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: FVRKPSQILACQTLIYKAYLQVI*AEVKTR Trigger: TCTGGTCTTGACTTCTGCCAAGATAACTTGAAGGTA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR GCA 72 bp | TATGAGCCATACACATTAATAGAAGACAACATGGATTaGCTACCTGTCTCCATGTTTATACTCCACACACAT | + |
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Preference number: 3 (lower is better) Translates to: YEPYTLIEDNMD*LPVSMFILHTH Trigger: ATGTGTGTGGAGTATAAACATGGAGACAGGTAGGCAATCCATGTTGTCTTCTATTAATGTGTATGGCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CCA 72 bp | TTTCCAGAAAAGAATTGGAAGCATATCAATAGGAGTTaGGAAGAATGCGTACCTTCAAGTTATCTTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FPEKNWKHINRS*EECVPSSYLGR Trigger: TCTGCCAAGATAACTTGAAGGTACGCATTCTTCCCAACTCCTATTGATATGCTTCCAATTCTTTTCTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAGTTCAAAATCTGTCTTaGGGACAGCTTTACAAACTG | + |
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Preference number: 3 (lower is better) Translates to: FVRKPSQILACQTLIYKAVQNLS*GQLYKL Trigger: CAGTTTGTAAAGCTGTCCCAAAGACAGATTTTGAAC...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR TCA 72 bp | AAACCTGGCTACACGTTAGAACAGCTACTGAATAACTaGTCCTTTTATTGTGAATACGTACAGAACCAGATT | + |
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Preference number: 3 (lower is better) Translates to: KPGYTLEQLLNN*SFYCEYVQNQI Trigger: AATCTGGTTCTGTACGTATTCACAATAAAAGGATCAGTTATTCAGTAGCTGTTCTAACGTGTAGCCAGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACGTATAGACATTTCCTaGCACGATTGCAGTAAATTA | + |
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Preference number: 3 (lower is better) Translates to: FVRKPSQILACQTLIYKARIDIS*HDCSKL Trigger: TAATTTACTGCAATCGTGCAAGGAAATGTCTATACG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATGCAAGCCAATGAATTaGAGTGTATATATCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: FVRKPSQILACQTLIYKACKPMN*SVYISS Trigger: AGAGCTGATATATACACTCAAATTCATTGGCTTGCA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR TCA 72 bp | TTTGGCTTGGATGGATTAACTCAGAAGTGCAATATGTaGTTTAACTTCATTCTGGCTACCAATTTCTACATT | + |
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Preference number: 3 (lower is better) Translates to: FGLDGLTQKCNM*FNFILATNFYI Trigger: AATGTAGAAATTGGTAGCCAGAATGAAGTTAAATCACATATTGCACTTCTGAGTTAATCCATCCAAGCCAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CCA 72 bp | TCAATCTGCCAGATCCTAACAAAATATTTATGTCCTTaGACAATATGGAAATGTGCATTTGCCTATACTTAC | + |
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Preference number: 3 (lower is better) Translates to: SICQILTKYLCP*TIWKCAFAYTY Trigger: GTAAGTATAGGCAAATGCACATTTCCATATTGTCCAAGGACATAAATATTTTGTTAGGATCTGGCAGATTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTCGGTTGGTTTGTCTCTaGGCTCAGCCTCCCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: HICRNMSQGQEQTQTQHSRLVCL*AQPPDP Trigger: AGGATCGGGAGGCTGAGCTCAGAGACAAACCAACCG...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CCA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTCGAAGCCATAGCCCTTaGAGCCTTCTCCATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: HICRNMSQGQEQTQTQHSRSHSP*SLLHQS Trigger: TGACTGATGGAGAAGGCTCCAAGGGCTATGGCTTCG...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTTCTCCCTCAGCAGCTTaGCATTCATCTCCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: HICRNMSQGQEQTQTQHSSPSAA*HSSPQW Trigger: CCATTGAGGAGATGAATGGCAAGCTGCTGAGGGAGA...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCTGGCCACGAACAAAGTaGTCTCCCTCAGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTWPRTK*SPSAAC Trigger: GCAAGCTGCTGAGGGAGAGCACTTTGTTCGTGGCCA...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCCCAAAGCCTTTGCTCTaGCCTGCTTCCTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTPKPLL*PASCIT Trigger: AGTGATGCAGGAAGCAGGGCAGAGCAAAGGCTTTGG...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCCGTCAAAGTTCATGGTaGCTAAGGCCTTCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTRQSSW*LRPSGH Trigger: ATGCCCAGAAGGCCTTAGTCACCATGAACTTTGACG...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACGGTTGGTTTGTCTCTaGGCTCAGCCTCCCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKARLVCL*AQPPDP Trigger: AGGATCGGGAGGCTGAGCTCAGAGACAAACCAACCG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCTCTCCCTCAGCAGCTTaGCATTCATCTCCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTSPSAA*HSSPQW Trigger: CCATTGAGGAGATGAATGGCAAGCTGCTGAGGGAGA...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCGCCTTTGCTCTGCCCTaGTTCCTGCATCACTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTAFALP*FLHHFN Trigger: GTTAAAGTGATGCAGGAAGCAGGGCAGAGCAAAGGC...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCGTGCTTCTGTCCCAGTaGAATGTTGAGGGGTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTVLLSQ*NVEGFG Trigger: TCCAAACCCCTCAACATTGCACTGGGACAGAAGCAC...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATGGCCACGAACAAAGTaGTCTCCCTCAGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKAWPRTK*SPSAAC Trigger: GCAAGCTGCTGAGGGAGAGCACTTTGTTCGTGGCCA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACATTCATCTCCTCAATaGCCCTGTCTGCCGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKAHSSPQ*PCLPLS Trigger: GGAGAGCGGCAGACAGGGCCATTGAGGAGATGAATG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | ATGCTAAAACACACATCAAGCAACATAACCTCACATTaGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: MLKHTSSNITSH*SEHEPRPRANA Trigger: TGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTGAGGTTATGTTGCTTGATGTGTGTTTTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCTCACCTTGGAAGACATaGTCGTTCCAAAAGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTSPWKT*SFQKVR Trigger: TCTCACCTTTTGGAACGATCATGTCTTCCAAGGTGA...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACCAAAGCCTTTGCTCTaGCCTGCTTCCTGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKAPKPLL*PASCIT Trigger: AGTGATGCAGGAAGCAGGGCAGAGCAAAGGCTTTGG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCATTAGTGAACTCGGTTaGTTTGTCTCTGAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTISELG*FVSELS Trigger: GCTGAGCTCAGAGACAAACCAACCGAGTTCACTAAT...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | GTTATCTTGGCAGAAGTCAAGACCAGAAGAGAAGCATaGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VILAEVKTRREA*QSHPYFSRVWE Trigger: TTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTCTCTTCTGGTCTTGACTTCTGCCAAGATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | ATCTTAAGGCACCTAGAATGCCAATCTTATCTCAGGTaGGCTGTGAACAGCATGCCTTTGGGTGATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILRHLECQSYLR*AVNSMPLGDDK Trigger: TTTATCATCACCCAAAGGCATGCTGTTCACAGCCAACCTGAGATAAGATTGGCATTCTAGGTGCCTTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCGATCGTTCCAAAAGGTaGGAAGTGTTCATACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EALQSHPYFSRVWESWKTDRSKR*EVFIQG Trigger: ACCTTGTATGAACACTTCTCACCTTTTGGAACGATC...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACTCTGCCCTGCTTCCTaGATCACTTTAACCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKALCPAS*ITLTLQ Trigger: TTGCAGGGTTAAAGTGATGCAGGAAGCAGGGCAGAG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTCGAAGCCATAGCCCTTaGAGCCTTCTCCATCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MMKILIKVEILQANEFECRSHSP*SLLHQS Trigger: TGACTGATGGAGAAGGCTCCAAGGGCTATGGCTTCG...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | AGAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTaGGGAATCATGGAAAACCCATTGGCCAAAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSIAKPPIFLKS*GIMENPLAKVK Trigger: TTTGACTTTGGCCAATGGGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTCTCTGCCCTGCTTCCTaGATCACTTTAACCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MMKILIKVEILQANEFECLCPAS*ITLTLQ Trigger: TTGCAGGGTTAAAGTGATGCAGGAAGCAGGGCAGAG...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR GCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTGCCTTTGCTCTGCCCTaGTTCCTGCATCACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: MMKILIKVEILQANEFECAFALP*FLHHFN Trigger: GTTAAAGTGATGCAGGAAGCAGGGCAGAGCAAAGGC...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTCCCGTTGAGACCACATaGGACGAATGGATTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MMKILIKVEILQANEFECPVETT*DEWIYL Trigger: AAGGTAAATCCATTCGTCTCATGTGGTCTCAACGGG...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR TCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAGATCGTTCCAAAAGGTaGGAAGTGTTCATACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKADRSKR*EVFIQG Trigger: ACCTTGTATGAACACTTCTCACCTTTTGGAACGATC...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS-3UTR GCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAAGACTGAAAATTCCTTaGGCAGTGTTTCATCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKARLKIP*AVFHHR Trigger: TCGATGATGAAACACTGCGCAAGGAATTTTCAGTCT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CCA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCATTTTTCGCAGCCTCGTaGCTATCAAAACTCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FVRKPSQILACQTLIYKAFFAAS*LSKLTN Trigger: ATTTGTGAGTTTTGATAGCCACGAGGCTGCGAAAAA...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | TCACATAAAACGAAATGTTTTCGTATAGACATTTCCTaGCACGATTGCAGTAAATTAAGCAGCCACTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHKTKCFRIDIS*HDCSKLSSHWV Trigger: AACCCAGTGGCTGCTTAATTTACTGCAATCGTGCAAGGAAATGTCTATACGAAAACATTTCGTTTTATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| 3UTR CAA 72 bp | ACTTTCACAACATCAGCATCTAGTGAATGCCTAAAATaGCATCACATTGAACCACATGGGTGTGATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TFTTSASSECLK*HHIEPHGCDLI Trigger: AATCAAATCACACCCATGTGGTTCAATGTGATGCAATTTTAGGCATTCACTAGATGCTGATGTTGTGAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTCAGGCAAGCATCCCGTaGAGACCACATGAGACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HICRNMSQGQEQTQTQHSQASIP*RPHETN Trigger: ATTCGTCTCATGTGGTCTCAACGGGATGCTTGCCTG...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS TCA 90 bp | ATAAACACATTCCCGACTCCCGATCTCCTCAGGCAAGCATCCCGTTaGGACCACATGAGACGAATGGATTTACCTTTGATCACGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: INTFPTPDLLRQASR*DHMRRMDLPLITSK Trigger: CTTTGACGTGATCAAAGGTAAATCCATTCGTCTCATGTGGTCTCAACGGGATGCTTGCCTGAGGAGATCGGGAGTCGGGAATGTGTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS TCA 90 bp | CCCTGCTTCCTGCATCACTTTAACCCTGCAAATGGACCCAAAGACTaGAAATTCCTTGCGCAGTGTTTCATCATCGATGGTGTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCFLHHFNPANGPKD*KFLAQCFIIDGVIQ Trigger: CTGGATGACACCATCGATGATGAAACACTGCGCAAGGAATTTTCAGTCTTTGGGTCCATTTGCAGGGTTAAAGTGATGCAGGAAGCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS GCA 90 bp | GCCTGTCGTTCTACCTTCTTCTGGGCTCTGCCTACAAAAATCGTCTaGCCGTTTATGTCCTGTCCATTCATGTCTTCAACTGCGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ACRSTFFWALPTKIV*PFMSCPFMSSTAFF Trigger: GAAAAACGCAGTTGAAGACATGAATGGACAGGACATAAACGGGCAGACGATTTTTGTAGGCAGAGCCCAGAAGAAGGTAGAACGACAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS GCA 90 bp | GAGAAGAAGCAGATTAAGCCAAAGCCTTTGCTCTGCCCTGCTTCCTaGATCACTTTAACCCTGCAAATGGACCCAAAGACTGAAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKKQIKPKPLLCPAS*ITLTLQMDPKTENS Trigger: GGAATTTTCAGTCTTTGGGTCCATTTGCAGGGTTAAAGTGATGCAGGAAGCAGGGCAGAGCAAAGGCTTTGGCTTAATCTGCTTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | CACATTTGTCGGAACATGAGCCAAGGCCAAGAGCAAACGCAAACGCAACACAGTGATTTGTCCAGATTCTaGATAAACACATTCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: HICRNMSQGQEQTQTQHSDLSRF*INTFPT Trigger: AGTCGGGAATGTGTTTATCAAGAATCTGGACAAATC...ACTGTGTTGCGTTTGCGTTTGCTCTTGGCCTTGGCTCATGTTCCGACAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS TCA 90 bp | CATAGCCCTTGGAGCCTTCTCCATCAGTCATCACCTTGGAAGACATaGTCGTTCCAAAAGGTGAGAAGTGTTCATACAAGGTTTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HSPWSLLHQSSPWKT*SFQKVRSVHTRFCY Trigger: ATAACAAAACCTTGTATGAACACTTCTCACCTTTTGGAACGATCATGTCTTCCAAGGTGATGACTGATGGAGAAGGCTCCAAGGGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCACAGGCAAGCATCCCGTaGAGACCACATGAGACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVRKPSQILACQTLIYKAQASIP*RPHETN Trigger: ATTCGTCTCATGTGGTCTCAACGGGATGCTTGCCTG...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAATTAAGCCAAAGCCTTaGCTCTGCCCTGCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FVRKPSQILACQTLIYKAIKPKP*LCPASC Trigger: GCAGGAAGCAGGGCAGAGCAAAGGCTTTGGCTTAAT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTATTAAGCCAAAGCCTTaGCTCTGCCCTGCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MMKILIKVEILQANEFECIKPKP*LCPASC Trigger: GCAGGAAGCAGGGCAGAGCAAAGGCTTTGGCTTAAT...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | GAAGCATTGCAAAGCCACCCATATTTCTCAAGAGTTTGGGAATCATGGAAAACCCTTAACACTCAAAGTTaGGCCATATTTGCTGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EALQSHPYFSRVWESWKTLNTQS*AIFAEN Trigger: GTTTTCAGCAAATATGGCCAAACTTTGAGTGTTAAG...GGTTTTCCATGATTCCCAAACTCTTGAGAAATATGGGTGGCTTTGCAATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | ATGATGAAAATACTCATCAAGGTAGAGATTCTGCAAGCCAATGAATTTGAGTGTACAAATCCAAAGCCTTaGGACTTCCCAGTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MMKILIKVEILQANEFECTNPKP*DFPVAS Trigger: AGATGCCACTGGGAAGTCCAAAGGCTTTGGATTTGT...ACACTCAAATTCATTGGCTTGCAGAATCTCTACCTTGATGAGTATTTTCATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAAAAGTTTGGCCATATTaGCTGAAAACTTCCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVRKPSQILACQTLIYKAKVWPY*LKTSLS Trigger: GCTCAGGGAAGTTTTCAGCAAATATGGCCAAACTTT...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS-3UTR CAA 90 bp | TTCGTAAGAAAGCCATCCCAAATATTGGCCTGTCAAACTTTGATTTATAAGGCAGATTTGTCCAGATTCTaGATAAACACATTCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: FVRKPSQILACQTLIYKADLSRF*INTFPT Trigger: AGTCGGGAATGTGTTTATCAAGAATCTGGACAAATC...TGCCTTATAAATCAAAGTTTGACAGGCCAATATTTGGGATGGCTTTCTTACGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS CAA 72 bp | GTTTGGAGCCAAGGATGCGGCCGTTCATCTCAGCCATaGCTTTCGCCGCTGCCTCCGGGGAGAAGAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VWSQGCGRSSQP*LSPLPPGRRSR Trigger: TCTGCTTCTTCTCCCCGGAGGCAGCGGCGAAAGCAATGGCTGAGATGAACGGCCGCATCCTTGGCTCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS GCA 72 bp | AGGCGTAGCCTAGTGAACGTTGGGAAATCAGGTCCCTaGAGATTCGGATGGACAACACCGGCCCCACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSLVNVGKSGP*RFGWTTPAPLC Trigger: GCACAGTGGGGCCGGTGTTGTCCATCCGAATCTGCAGGGACCTGATTTCCCAACGTTCACTAGGCTACGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS TCA 72 bp | TTCCCGACTCCCGATCTCCTCAGGCAAGCATCCCGTTaGGACCACATGAGACGAATGGATTTACCTTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: FPTPDLLRQASR*DHMRRMDLPLI Trigger: GATCAAAGGTAAATCCATTCGTCTCATGTGGTCTCAACGGGATGCTTGCCTGAGGAGATCGGGAGTCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS CAA 72 bp | ATTCCCGACTCCCGATCTCCTCAGGCAAGCATCCCGTaGAGACCACATGAGACGAATGGATTTACCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: IPDSRSPQASIP*RPHETNGFTFD Trigger: ATCAAAGGTAAATCCATTCGTCTCATGTGGTCTCAACGGGATGCTTGCCTGAGGAGATCGGGAGTCGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS GCA 72 bp | CTGCCCGTTTATGTCCTGTCCATTCATGTCTTCAACTaGGTTTTTCGCAGCCTCGTGGCTATCAAAACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPVYVLSIHVFN*VFRSLVAIKTH Trigger: GTGAGTTTTGATAGCCACGAGGCTGCGAAAAACGCAGTTGAAGACATGAATGGACAGGACATAAACGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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| CDS GCA 72 bp | CAGATTAAGCCAAAGCCTTTGCTCTGCCCTGCTTCCTaGATCACTTTAACCCTGCAAATGGACCCAAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: QIKPKPLLCPAS*ITLTLQMDPKT Trigger: AGTCTTTGGGTCCATTTGCAGGGTTAAAGTGATGCAGGAAGCAGGGCAGAGCAAAGGCTTTGGCTTAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS TCA 72 bp | TGGAGCCTTCTCCATCAGTCATCACCTTGGAAGACATaGTCGTTCCAAAAGGTGAGAAGTGTTCATACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSLLHQSSPWKT*SFQKVRSVHTR Trigger: CCTTGTATGAACACTTCTCACCTTTTGGAACGATCATGTCTTCCAAGGTGATGACTGATGGAGAAGGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 ENSMUST00000195436.2 |
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| CDS GCA 72 bp | TCTACCTTCTTCTGGGCTCTGCCTACAAAAATCGTCTaGCCGTTTATGTCCTGTCCATTCATGTCTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: STFFWALPTKIV*PFMSCPFMSST Trigger: AGTTGAAGACATGAATGGACAGGACATAAACGGGCAGACGATTTTTGTAGGCAGAGCCCAGAAGAAGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS GCA 72 bp | ATCCAGGTTCTTAATGTAGAGCTTAGCTGCCTGGCGTaGACGGATTCTTTCCTTTTTCATCTGCTCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: IQVLNVELSCLA*TDSFLFHLLKH Trigger: ATGTTTGAGCAGATGAAAAAGGAAAGAATCCGTGCACGCCAGGCAGCTAAGCTCTACATTAAGAACCTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS CAA 72 bp | AAGTTTTTGATATACACATTAGTGAACTCGGTTGGTTaGTCTCTGAGCTCAGCCTCCCGATCCTTACGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KFLIYTLVNSVG*SLSSASRSLRL Trigger: AAGCCGTAAGGATCGGGAGGCTGAGCTCAGAGACAAACCAACCGAGTTCACTAATGTGTATATCAAAAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS CAA 90 bp | TGCATCACTTTAACCCTGCAAATGGACCCAAAGACTGAAAATTCCTaGCGCAGTGTTTCATCATCGATGGTGTCATCCAGGTTCTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: CITLTLQMDPKTENS*RSVSSSMVSSRFLM Trigger: CATTAAGAACCTGGATGACACCATCGATGATGAAACACTGCGCAAGGAATTTTCAGTCTTTGGGTCCATTTGCAGGGTTAAAGTGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS CAA 90 bp | AAAACTTCCCTGAGCTTCTCATCATCTACGTCATCTCCAAAGTTTTaGATATACACATTAGTGAACTCGGTTGGTTTGTCTCTGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KTSLSFSSSTSSPKF*IYTLVNSVGLSLSS Trigger: TGAGCTCAGAGACAAACCAACCGAGTTCACTAATGTGTATATCAAAAACTTTGGAGATGACGTAGATGATGAGAAGCTCAGGGAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
||
| CDS CAA 72 bp | CTGAGCTTCTCATCATCTACGTCATCTCCAAAGTTTTaGATATACACATTAGTGAACTCGGTTGGTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFSSSTSSPKF*IYTLVNSVGLS Trigger: AGACAAACCAACCGAGTTCACTAATGTGTATATCAAAAACTTTGGAGATGACGTAGATGATGAGAAGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166505.7 ENSMUST00000192793.6 |
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