Pregenerated sensors for PABPC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011257Ensembl transcript IDs: ENSMUST00000078734.12, ENSMUST00000080178.13, ENSMUST00000106241.8, ENSMUST00000106243.8, ENSMUST00000183940.8
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCGTACTTGTATGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTaGGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: GVLVWSHSPGSGGSN*GPRCKVWHGCRDAS Trigger: GGAGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CCA 90 bp | GCGGTCCGGGCACTCAGACCCAGTTGGAGCCAGATGTCGAAGAGCTaGACGAGGCCCAGACTGCCGCAGGGCACTTGGCATTCCTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: AVRALRPSWSQMSKS*TRPRLPQGTWHSLE Trigger: TTCCAAGGAATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGGTCTGAGTGCCCGGACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCGGTCTCCCGCCTTGCTaGCAGCGTGGATTAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GGSNCGPRCKVWHGCRDAGLPPC*QRGLGL Trigger: GAGGCCTAATCCACGCTGGCAGCAAGGCGGGAGACC...GGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACTCAGTCAGCCCTTGCTaGGCGGCACCAGCCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: SGGSNCGPRCKVWHGCRDSVSPC*AAPAPP Trigger: TGGTGGGGCTGGTGCCGCCCAGCAAGGGCTGACTGA...GTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCCGCTCTTCCTTCCTCTaGGCCAGGGCGACGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGSNCGPRCKVWHGCRDARSSFL*ARATYR Trigger: TCTGTACGTCGCCCTGGCCCAGAGGAAGGAAGAGCG...GGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGAGGTGGGGCCATGGCTaGCTCATGCGATGGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSGGSNCGPRCKVWHGCRRWGHG*LMRWLL Trigger: CAACAACCATCGCATGAGCCAGCCATGGCCCCACCT...CCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCCTTCGCGCTGGTGATTaGTCCAAAGGGAGAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: GGSNCGPRCKVWHGCRDALRAGD*SKGRKL Trigger: GAGTTTTCTCCCTTTGGATCAATCACCAGCGCGAAG...GGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGATTTAAGATGGCACTaGCAGGGAGTGCTCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: SGGSNCGPRCKVWHGCRDDLRWH*QGVLSS Trigger: GGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATC...GTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTTCCCGCTCTTTGCGAGACTTGAATCTACCCACGAACCAGCCCTGGAGTGGGGAGCAGGCCACACTTaGGCCGAGAGAACCAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: RFPLFARLESTHEPALEWGAGHT*AERTSS Trigger: GCTACTGGTTCTCTCGGCCCAAGTGTGGCCTGCTCC...CCACTCCAGGGCTGGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACCTTCCACAGCCTTATTaGCATCCTCGTGTTTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: SGGSNCGPRCKVWHGCRDLPQPY*HPRVSR Trigger: ACGAGAAACACGAGGATGCCAATAAGGCTGTGGAAG...GTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCGCCTTGCTGCCAGCGTaGATTAGGCCTCATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLALLPA*IRPHLC Trigger: GCACAGATGAGGCCTAATCCACGCTGGCAGCAAGGC...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTAAGATGGCACTGGCAGGGAGTGCTCTCATCCCCGCCACACGCTGCATGTACCGAGGTGGGGCCATaGCTGGCTCATGCGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: DLRWHWQGVLSSPPHAACTEVGP*LAHAMV Trigger: AACCATCGCATGAGCCAGCCATGGCCCCACCTCGGT...ACATGCAGCGTGTGGCGGGGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCGCTGCAGGCTGGAACTaGTTTAAGATGGCACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLAAGWN*FKMALA Trigger: TGCCAGTGCCATCTTAAATCAGTTCCAGCCTGCAGC...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGCGTGTAATATGGGGGTCTTCCCTGAGCCTGCGGAACTGCAGGCACAAAGGCTGGCTCATGCGATaGTTGTTGCTCCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VRRVIWGSSLSLRNCRHKGWLMR*LLLQTG Trigger: CCCAGTCTGGAGCAACAACCATCGCATGAGCCAGCC...TTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR GCA 90 bp | GTTAGGCGTGTAATATGGGGGTCTTCCCTGAGCCTGCGGAACTGCAGGCACAAAGCCATGGCTGGCTCATaGGATGGTTGTTGCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VRRVIWGSSLSLRNCRHKAMAGS*DGCCSR Trigger: TCTGGAGCAACAACCATCGCATGAGCCAGCCATGGC...TTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGTCCATAGCCAAGCGGTCCGGGCACTCAGACCCAGTTGGAGCCAGATGCGCTTCAGCTCAGCCTaGCTTTCTACCTTTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TKVHSQAVRALRPSWSQMRFSSA*LSTFFC Trigger: ACAGAAAAAGGTAGAAAGGCAGGCTGAGCTGAAGCG...CATCTGGCTCCAACTGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCCAAAGCCAAACCCTTTaGTTCTCCCATCTTCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLQSQTL*FSHLLA Trigger: TGCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTG...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCAGGGTCTTACCAAACTaGCTGAAGAGCTCTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLRVLPN*LKSSFR Trigger: TCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGACCCT...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR GCA 90 bp | GATTTAAGATGGCACTGGCAGGGAGTGCTCTCATCCCCGCCACACGCTGCATGTTTCTACCTTTTTCTGTaGACGGCCTACAAATATGGC | + |
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Preference number: 2 (lower is better) Translates to: DLRWHWQGVLSSPPHAACFYLFL*TAYKYG Trigger: GCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAA...ACATGCAGCGTGTGGCGGGGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGTTGCAACTTGGTTCTTaGTGTGGAGGTCCACAGACA | + |
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Preference number: 2 (lower is better) Translates to: KAQDCNIKLASNSAIFMELQLGS*CGGPQT Trigger: TGTCTGTGGACCTCCACACCAAGAACCAAGTTGCAA...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| 3UTR GCA 72 bp | AGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTaGAAGGTTTGGCACGGCTGTAGGGACGCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SPGSGGSNCGPR*KVWHGCRDASR Trigger: TCTGGAGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR GCA 72 bp | GTATGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTaGGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: VWSHSPGSGGSN*GPRCKVWHGCR Trigger: CCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGACTGCCGCAGGGCACTaGGCATTCCTTGGAAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: GSGGSNCGPRCKVWHGCRTAAGH*AFLGSL Trigger: AAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAGT...CCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGATCTCGGTGACAGCTTaGGTCGCCTCTTCAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GSGGSNCGPRCKVWHGCRISVTA*VASSGE Trigger: CTCTCCTGAAGAGGCGACCAAAGCTGTCACCGAGAT...CCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACTCCGCTTCCCGCTCTTaGCGAGACTTGAATCTACCC | + |
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Preference number: 3 (lower is better) Translates to: SGGSNCGPRCKVWHGCRDSASRS*RDLNLP Trigger: GGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGA...GTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGTTTGCAACTTGGTTCTaGGTGTGGAGGTCCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: GSGGSNCGPRCKVWHGCRFATWF*VWRSTD Trigger: GTCTGTGGACCTCCACACCAAGAACCAAGTTGCAAA...CCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CCA 72 bp | GCACTCAGACCCAGTTGGAGCCAGATGTCGAAGAGCTaGACGAGGCCCAGACTGCCGCAGGGCACTTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: ALRPSWSQMSKS*TRPRLPQGTWH Trigger: ATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGGTCTGAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCGCGACGTACAGAGGCTaGGAGCCCACAATGCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLATYRG*EPTMRP Trigger: TGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCGC...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR TCA 72 bp | TGGCTCCAAGCTCCGCTTCCCGCTCTTTGCGAGACTTaGATCTACCCACGAACCAGCCCTGGAGTGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: WLQAPLPALCET*IYPRTSPGVER Trigger: CCTCTCCACTCCAGGGCTGGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGTCCATAGCCAAGCGGTCCGGGCACTCAGACCCAGTTGGAGCCAGATGCATTCCTTGGAAGCCTaGAGGTCTCCCGCCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: TKVHSQAVRALRPSWSQMHSLEA*RSPALL Trigger: CAGCAAGGCGGGAGACCTCAAGGCTTCCAAGGAATG...CATCTGGCTCCAACTGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGTCCATAGCCAAGCGGTCCGGGCACTCAGACCCAGTTGGAGCCAGATGGGCACTTGGCATTCCTaGGAAGCCTTGAGGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: TKVHSQAVRALRPSWSQMGTWHS*EALRSP Trigger: GGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCC...CATCTGGCTCCAACTGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CCA 72 bp | GCCTTGTGTGTGCCAGTTAATACCGAGGTGGGGCCATaGCTGGCTCATGCGATGGTTGTTGCTCCAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: ALCVPVNTEVGP*LAHAMVVAPDW Trigger: CCAGTCTGGAGCAACAACCATCGCATGAGCCAGCCATGGCCCCACCTCGGTATTAACTGGCACACACAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CCA 72 bp | TGTGTGTGCCAGTTAATACCGAGGTGGGGCCATGGCTaGCTCATGCGATGGTTGTTGCTCCAGACTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: CVCQLIPRWGHG*LMRWLLLQTGT Trigger: TGTCCCAGTCTGGAGCAACAACCATCGCATGAGCCAGCCATGGCCCCACCTCGGTATTAACTGGCACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTGCCTTTCTACCTTTTTCTGTGCACGGCCTACAAATATGGCTTTCCCGCTGGCTCATGCGATGGTaGTTGCTCCAGACTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: QPAFLPFSVHGLQIWLSRWLMRW*LLQTGT Trigger: TGTCCCAGTCTGGAGCAACAACCATCGCATGAGCCA...GCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAAAGGCAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTGCCTTTCTACCTTTTTCTGTGCACGGCCTACAAATATGGCTTTCCCGCGAACCAGTAGCCGCCTaGTGTGTGCCAGTTAATACC | + |
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Preference number: 3 (lower is better) Translates to: QPAFLPFSVHGLQIWLSREPVAA*CVPVNT Trigger: GGTATTAACTGGCACACACAAGGCGGCTACTGGTTC...GCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAAAGGCAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTTTCTGTGCACGGCCTACAAATATGGCTTTCCCGCTCATTTCCTTTCCATTGTGAATTCCTTGGCCTaGGCTCCAAGCTCCGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LFLCTAYKYGFPAHFLSIVNSLA*APSSAS Trigger: GGAAGCGGAGCTTGGAGCCAAGGCCAAGGAATTCAC...AATGGAAAGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTTTTGCAACTTGGTTCTaGGTGTGGAGGTCCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: LAKAQDCNIKLASNSAIFFATWF*VWRSTD Trigger: GTCTGTGGACCTCCACACCAAGAACCAAGTTGCAAA...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTCCATAGCCAAGCGGTCCGGGCACTCAGACCCAGTTGGAGCCAGATGCGCGACAGACCCGGATaGACAGCACAGGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TKVHSQAVRALRPSWSQMRDRPG*TAQAPQ Trigger: CTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGCG...CATCTGGCTCCAACTGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CAA 72 bp | CAGGCCACACTTGGGCCGAGAGAACCAGTAGCCGCCTaGTGTGTGCCAGTTAATACCGAGGTGGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QATLGPREPVAA*CVPVNTEVGPW Trigger: CCATGGCCCCACCTCGGTATTAACTGGCACACACAAGGCGGCTACTGGTTCTCTCGGCCCAAGTGTGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CAA 72 bp | TTGGCTCCAAGCTCCGCTTCCCGCTCTTTGCGAGACTaGAATCTACCCACGAACCAGCCCTGGAGTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LAPSSASRSLRD*NLPTNQPWSGE Trigger: CTCTCCACTCCAGGGCTGGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| CDS-3UTR CCA 90 bp | TTGTGTGTGCCAGTTAATACCGAGGTGGGGCCATGGCTGGCTCATGCGATGGTTCGTATAAGGAGGCCATaGGGTAGCTGCTGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCVPVNTEVGPWLAHAMVRIRRP*GSCWLQ Trigger: CTGCAGCCAGCAGCTACCCCATGGCCTCCTTATACG...AACCATCGCATGAGCCAGCCATGGCCCCACCTCGGTATTAACTGGCACACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| 3UTR CAA 72 bp | AGATTCACCCCCTGGTACCGGCTAATCCTCTCCTGCTaGAGCTGCTCAAACTTCCGCTTCAGCTCAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RFTPWYRLILSC*SCSNFRFSSAC Trigger: GCAGGCTGAGCTGAAGCGGAAGTTTGAGCAGCTCAAGCAGGAGAGGATTAGCCGGTACCAGGGGGTGAATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGTTAATACCGAGGTGGGGCCATGGCTGGCTCATGCGATGGTTGTTGCTCACACTTTACGGTCATTaGGAAGCATGCCATTCATCT | + |
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Preference number: 4 (lower is better) Translates to: CQLIPRWGHGWLMRWLLLTLYGH*EACHSS Trigger: AGATGAATGGCATGCTTCTCAATGACCGTAAAGTGT...GAGCAACAACCATCGCATGAGCCAGCCATGGCCCCACCTCGGTATTAACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGACGTGGACTGCAGGCTaGGGGGCCTGCAGCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMETWTAG*GACSGW Trigger: CCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCACGT...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCGCGACAGACCCGGATaGACAGCACAGGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMERDRPG*TAQAPQ Trigger: CTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGCG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCCTGCAGCGGCTGGATaGCAGGGTGTGGGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEPAAAG*QGVGCG Trigger: TCCGCAGCCCACACCCTGCCATCCAGCCGCTGCAGG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTGCAGTCAGGGGCTCCTaGCCCTGGACGTGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFAVRGS*PWTWTA Trigger: TGCAGTCCACGTCCAGGGTCAGGAGCCCCTGACTGC...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCTGTGCACGGCCTACAAATATGGCTTTCCCGCTCATTTCCTTTCCATTTCGGTGACGTCCGAGTaGAAATCGCCCACGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLCTAYKYGFPAHFLSISVTSE*KSPTYK Trigger: CTTATACGTGGGCGATTTGCACTCGGACGTCACCGA...AATGGAAAGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCCACAGCCCTaGGAGCGGCGGCAGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFMEPQP*ERRQQL Trigger: CAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCAT...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGTATGGGGGTCTTCCCTaGGCCTGCGGAACTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEYGGLP*ACGTAG Trigger: GCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATA...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTGGTCTCCCGCCTTGCTaGCAGCGTGGATTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFGLPPC*QRGLGL Trigger: GAGGCCTAATCCACGCTGGCAGCAAGGCGGGAGACC...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCGCTCTTCCTTCCTCTaGGCCAGGGCGACGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMERSSFL*ARATYR Trigger: TCTGTACGTCGCCCTGGCCCAGAGGAAGGAAGAGCG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCAGATGTCGAAGAGCTaGACGAGGCCCAGACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFQMSKS*TRPRLP Trigger: CGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGGAGGCGTACTTGTATaGAGCCACAGCCCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEGGVLV*SHSPGS Trigger: GCTCCCAGGGCTGTGGCTCCATACAAGTACGCCTCC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCGTATAAGGAGGCCATaGGGTAGCTGCTGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFRIRRP*GSCWLQ Trigger: CTGCAGCCAGCAGCTACCCCATGGCCTCCTTATACG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGCCTTGCTGCCAGCGTaGATTAGGCCTCATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEALLPA*IRPHLC Trigger: GCACAGATGAGGCCTAATCCACGCTGGCAGCAAGGC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCTGCCGCAGGGCACTTaGCATTCCTTGGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFLPQGT*HSLEAL Trigger: CAAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCGACGTACAGAGGCTTaGAGCCCACAATGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMERRTEA*SPQCVH Trigger: ATGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGTCCATTCATCTCGGTaGCAGCTTTGGTCGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEVHSSR*QLWSPL Trigger: AAGAGGCGACCAAAGCTGTCACCGAGATGAATGGAC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGCTGCAGGCTGGAACTaGTTTAAGATGGCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEAAGWN*FKMALA Trigger: TGCCAGTGCCATCTTAAATCAGTTCCAGCCTGCAGC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGTCGGTGACGTCCGAGTaGAAATCGCCCACGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMESVTSE*KSPTYK Trigger: CTTATACGTGGGCGATTTGCACTCGGACGTCACCGA...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCATTCATCTTCTCGATaGCCTTGTCGGCGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFHSSSR*PCRRPL Trigger: AAGAGGCCGCCGACAAGGCCATCGAGAAGATGAATG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGTTAGGCGTGTAATATaGGGGTCTTCCCTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEVRRVI*GSSLSL Trigger: CAGGCTCAGGGAAGACCCCCATATTACACGCCTAAC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCGGAGCATTACCAGTTaGAGCCAGATGTCGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFRSITS*SQMSKS Trigger: GCTCTTCGACATCTGGCTCCAACTGGTAATGCTCCG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCTTCGCGCTGGTGATTaGTCCAAAGGGAGAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMELRAGD*SKGRKL Trigger: GAGTTTTCTCCCTTTGGATCAATCACCAGCGCGAAG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGATTTAAGATGGCACTaGCAGGGAGTGCTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEDLRWH*QGVLSS Trigger: GGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTGCTCTTTGCGAGACTTaGATCTACCCACGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFALCET*IYPRTL Trigger: AAGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGC...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCGCTTCAGCTCAGCCTaGCTTTCTACCTTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMERFSSA*LSTFFC Trigger: ACAGAAAAAGGTAGAAAGGCAGGCTGAGCTGAAGCG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCTTCCACAGCCTTATTaGCATCCTCGTGTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMELPQPY*HPRVSR Trigger: ACGAGAAACACGAGGATGCCAATAAGGCTGTGGAAG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCACGGCCTACAAATATaGCTTTCCCGCTCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEHGLQI*LSRSFP Trigger: AGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGTCTTACCAAACTGGCTaGAGAGCTCTTTCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMESYQTG*RALSDS Trigger: GGAATCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGA...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCAAAGCCAAACCCTTTaGTTCTCCCATCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEQSQTL*FSHLLA Trigger: TGCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CCA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTAGGGTCTTACCAAACTaGCTGAAGAGCTCTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAKAQDCNIKLASNSAIFRVLPN*LKSSFR Trigger: TCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGACCCT...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR TCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGACACTTTACGGTCATTaGGAAGCATGCCATTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMETLYGH*EACHSS Trigger: AGATGAATGGCATGCTTCTCAATGACCGTAAAGTGT...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGTTCTACCTTTTTCTGTaGACGGCCTACAAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQDCNIKLASNSAIFMEFYLFL*TAYKYG Trigger: GCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAA...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS GCA 90 bp | TGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTaGAAGGTTTGGCACGGCTGTAGGGACGCCAGTTGGAGCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: WSHSPGSGGSNCGPR*KVWHGCRDASWSQM Trigger: CATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS GCA 90 bp | TGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTaGAAGGTTTGGCACGGCTGTAGGGACGCCGACTCTCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WSHSPGSGGSNCGPR*KVWHGCRDADSLSS Trigger: ACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS GCA 90 bp | GGCGTACTTGTATGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTaGGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVLVWSHSPGSGGSN*GPRCKVWHGCRDAD Trigger: GTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS GCA 90 bp | GGCGTACTTGTATGGAGCCACAGCCCTGGGAGCGGCGGCAGCAACTaGGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVLVWSHSPGSGGSN*GPRCKVWHGCRDAS Trigger: ACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
||
| CDS CCA 90 bp | AGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTaGCACGGCTGTAGGGACGCCAGTTGGAGCCAGATGTCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSGGSNCGPRCKV*HGCRDASWSQMSKS Trigger: GCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS CCA 90 bp | TGCGGCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCAGTTaGAGCCAGATGTCGAAGAGCTGGACGAGGCCCAGACTGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGPRCKVWHGCRDAS*SQMSKSWTRPRLPQ Trigger: CTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
||
| CDS CCA 90 bp | AGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTaGCACGGCTGTAGGGACGCCGACTCTCTGAGCAGTAGTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGSGGSNCGPRCKV*HGCRDADSLSSSRK Trigger: CTTCCTACTACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS CCA 90 bp | TGGCACGGCTGTAGGGACGCCAGTTGGAGCCAGATGTCGAAGAGCTaGACGAGGCCCAGACTGCCGCAGGGCACTTGGCATTCCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WHGCRDASWSQMSKS*TRPRLPQGTWHSLE Trigger: TTCCAAGGAATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
||
| CDS TCA 90 bp | GCCCGAGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCGACTCTCTaGGCAGTAGTAGGAAGGCCACGAGAGGCCGGAGCATTACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARGARFGTAVGTPTL*AVVGRPREAGALPV Trigger: AACTGGTAATGCTCCGGCCTCTCGTGGCCTTCCTACTACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS CCA 90 bp | CTGAGCAGTAGTAGGAAGGCCACGAGAGGCCGGAGCATTACCAGTTaGAGCCAGATGTCGAAGAGCTGGACGAGGCCCAGACTGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRKATRGRSITS*SQMSKSWTRPRLPQ Trigger: CTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTTCCTACTACTGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080178.13 ENSMUST00000106243.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGAGCCTGCAGGACTGCCACCGCTTCATCTACCTTGGAGCGGAGGGACTCCTTGTCGGCGGCCTCTaGGGTCTCGAAGTGAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: MVSLQDCHRFIYLGAEGLLVGGL*GLEVNK Trigger: TTTGTTCACTTCGAGACCCAAGAGGCCGCCGACAAG...GAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGGCGTGTAATATGGGGGTCTTCCCTGAGCCTGCGGAACTGCAGGCACAAAATCTTCTCGATGGCCTaGTCGGCGGCCTCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VRRVIWGSSLSLRNCRHKIFSMA*SAASWV Trigger: GACCCAAGAGGCCGCCGACAAGGCCATCGAGAAGAT...TTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTTAATACCGAGGTGGGGCCATGGCTGGCTCATGCGATGGTTGTTGCTCCACACTTTACGGTCATaGAGAAGCATGCCATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CQLIPRWGHGWLMRWLLLHTLRS*RSMPFI Trigger: GATGAATGGCATGCTTCTCAATGACCGTAAAGTGTG...GAGCAACAACCATCGCATGAGCCAGCCATGGCCCCACCTCGGTATTAACTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183940.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATCTTCTCGATGGCCTaGTCGGCGGCCTCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFIFSMA*SAASWV Trigger: GACCCAAGAGGCCGCCGACAAGGCCATCGAGAAGAT...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTGCGACGTACAGAGGCTaGGAGCCCACAATGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFATYRG*EPTMRP Trigger: TGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCGC...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTGTGAATTCCTTGGCCTaGGCTCCAAGCTCCGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFVNSLA*APSSAS Trigger: GGAAGCGGAGCTTGGAGCCAAGGCCAAGGAATTCAC...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCATTCCTTGGAAGCCTaGAGGTCTCCCGCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFHSLEA*RSPALL Trigger: CAGCAAGGCGGGAGACCTCAAGGCTTCCAAGGAATG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGGGCACTTGGCATTCCTaGGAAGCCTTGAGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: KAQDCNIKLASNSAIFMEGTWHS*EALRSP Trigger: GGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCC...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGACTGCCGCAGGGCACTaGGCATTCCTTGGAAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: KAQDCNIKLASNSAIFMETAAGH*AFLGSL Trigger: AAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAGT...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGCTTGTCGGCGGCCTCTaGGGTCTCGAAGTGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: KAQDCNIKLASNSAIFMELVGGL*GLEVNK Trigger: TTTGTTCACTTCGAGACCCAAGAGGCCGCCGACAAG...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTTCCGCTTCCCGCTCTTaGCGAGACTTGAATCTACCC | + |
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Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFSASRS*RDLNLP Trigger: GGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGA...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGATCTCGGTGACAGCTTaGGTCGCCTCTTCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KAQDCNIKLASNSAIFMEISVTA*VASSGE Trigger: CTCTCCTGAAGAGGCGACCAAAGCTGTCACCGAGAT...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTCGCTCTTTGCGAGACTaGAATCTACCCACGAACACT | + |
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Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFRSLRD*NLPTNT Trigger: AGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCG...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAAAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTACAAAGCCAAACCCTTaGCTTCTCCCATCTTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LAKAQDCNIKLASNSAIFTKPNP*LLPSSS Trigger: GCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTGT...AAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAAGATTGTAACATAAAACTGGCATCAAATTCAGCCATATTTATGGAGAACACTTTACGGTCATaGAGAAGCATGCCATTCATC | + |
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Preference number: 5 (lower is better) Translates to: KAQDCNIKLASNSAIFMENTLRS*RSMPFI Trigger: GATGAATGGCATGCTTCTCAATGACCGTAAAGTGTT...CTCCATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS GCA 72 bp | AGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTaGAAGGTTTGGCACGGCTGTAGGGACGCCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPGSGGSNCGPR*KVWHGCRDASW Trigger: CCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS GCA 72 bp | AGCCCTGGGAGCGGCGGCAGCAACTGCGGCCCGAGGTaGAAGGTTTGGCACGGCTGTAGGGACGCCGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SPGSGGSNCGPR*KVWHGCRDADS Trigger: AGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS CCA 72 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTaGCACGGCTGTAGGGACGCCAGTTGGAGCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: SGGSNCGPRCKV*HGCRDASWSQM Trigger: CATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS CCA 72 bp | AGCGGCGGCAGCAACTGCGGCCCGAGGTGCAAGGTTTaGCACGGCTGTAGGGACGCCGACTCTCTGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGGSNCGPRCKV*HGCRDADSLSS Trigger: ACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS TCA 72 bp | GCAAGGTTTGGCACGGCTGTAGGGACGCCGACTCTCTaGGCAGTAGTAGGAAGGCCACGAGAGGCCGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ARFGTAVGTPTL*AVVGRPREAGA Trigger: TGCTCCGGCCTCTCGTGGCCTTCCTACTACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106243.8 |
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| CDS CCA 72 bp | TGTAGGGACGCCAGTTGGAGCCAGATGTCGAAGAGCTaGACGAGGCCCAGACTGCCGCAGGGCACTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: CRDASWSQMSKS*TRPRLPQGTWH Trigger: ATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS CCA 72 bp | AGGTGCAAGGTTTGGCACGGCTGTAGGGACGCCAGTTaGAGCCAGATGTCGAAGAGCTGGACGAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RCKVWHGCRDAS*SQMSKSWTRPR Trigger: TCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078734.12 |
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| CDS CCA 72 bp | AGTAGGAAGGCCACGAGAGGCCGGAGCATTACCAGTTaGAGCCAGATGTCGAAGAGCTGGACGAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRKATRGRSITS*SQMSKSWTRPR Trigger: TCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTTCCTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080178.13 ENSMUST00000106243.8 |
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| CDS CCA 72 bp | TGCGGATCGGCTTTCCCTTCATCACGTCGAAGTTCATaGTGTCCAAGGCCCTCTCAGCGTCAGCTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CGSAFPSSRRSS*CPRPSQRQLAA Trigger: AGCAGCCAGCTGACGCTGAGAGGGCCTTGGACACCATGAACTTCGACGTGATGAAGGGAAAGCCGATCCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078734.12 ENSMUST00000080178.13 ENSMUST00000106241.8 ENSMUST00000106243.8 ENSMUST00000183940.8 |
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| CDS TCA 72 bp | CAGATTTTCTCAACGAGGGATCCCTCTGCGACCACATaGTGCGGATCGGCTTTCCCTTCATCACGTCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QIFSTRDPSATT*CGSAFPSSRRS Trigger: ACTTCGACGTGATGAAGGGAAAGCCGATCCGCATCATGTGGTCGCAGAGGGATCCCTCGTTGAGAAAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078734.12 ENSMUST00000080178.13 ENSMUST00000106241.8 ENSMUST00000106243.8 ENSMUST00000183940.8 |
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| CDS CAA 72 bp | TTGGCTCCAAGCTCCGCTTCCCGCTCTTTGCGAGACTaGAATCTACCCACGAACACTTTACGGTCATTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LAPSSASRSLRD*NLPTNTLRSLR Trigger: TCTCAATGACCGTAAAGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078734.12 ENSMUST00000080178.13 ENSMUST00000106241.8 ENSMUST00000106243.8 |
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