Pregenerated sensors for PABPC1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054582Ensembl transcript IDs: ENSMUST00000067715.5
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCAGACAGGCAGAACGGAGCCAGGCGTGAGAACATCCAGCCACTaGAAGTCTCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LQTGRTEPGVRTSSH*KSPMTPLASPNSLV Trigger: CACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGAGACTTGCAGTGGCTGGATGTTCTCACGCCTGGCTCCGTTCTGCCTGTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR CCA 90 bp | AATGTTCCCAGAATATGGAAAACACCCAATCTTCAGTCAAGAAGGTaGACCAGCAGACCAGGCCTCCAGACAGGCAGAACGGAGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: NVPRIWKTPNLQSRR*TSRPGLQTGRTEPG Trigger: GCCTGGCTCCGTTCTGCCTGTCTGGAGGCCTGGTCTGCTGGTCCACCTTCTTGACTGAAGATTGGGTGTTTTCCATATTCTGGGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR CCA 90 bp | ACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTaGGTTTTTGATCGCTGGGTTCTCTACGGAGTCTCCAGAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TKLPGASDKATNTSQ*VFDRWVLYGVSREP Trigger: TGGCTCTCTGGAGACTCCGTAGAGAACCCAGCGATCAAAAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCTGGGTTTTTGATCGCTaGGTTCTCTACGGAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SYDSFSFTKLPGASDKATWVFDR*VLYGVS Trigger: GGAGACTCCGTAGAGAACCCAGCGATCAAAAACCCA...GGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR-3UTR GCA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCCACCAAACTCCCTGGTaGTTCAGACAAAGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: KNTEIPIRKEVRVHTARTHQTPW*FRQSHQ Trigger: TTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTG...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTAGAACATCCAGCCACTaGAAGTCTCCTATGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LHYIIRAQEHRDPHQERSRTSSH*KSPMTP Trigger: AGGAGTCATAGGAGACTTGCAGTGGCTGGATGTTCT...ACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAAATGTTCCCAGAATATaGAAAACACCCAATCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SELKNTEIPIRKEVRVHTNVPRI*KTPNLQ Trigger: CTGAAGATTGGGTGTTTTCCATATTCTGGGAACATT...TGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR CCA 72 bp | CCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTaGGTTTTTGATCGCTGGGTTCTCTACGGAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PGASDKATNTSQ*VFDRWVLYGVS Trigger: GGAGACTCCGTAGAGAACCCAGCGATCAAAAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR TCA 72 bp | TTCAGACAAAGCCACCAACACATCACAGTGGGTTTTTaGTCGCTGGGTTCTCTACGGAGTCTCCAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: FRQSHQHITVGF*SLGSLRSLQRA Trigger: GGCTCTCTGGAGACTCCGTAGAGAACCCAGCGATCAAAAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR CCA 72 bp | AGAATATGGAAAACACCCAATCTTCAGTCAAGAAGGTaGACCAGCAGACCAGGCCTCCAGACAGGCAGAACG | + |
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Preference number: 3 (lower is better) Translates to: RIWKTPNLQSRR*TSRPGLQTGRT Trigger: CGTTCTGCCTGTCTGGAGGCCTGGTCTGCTGGTCCACCTTCTTGACTGAAGATTGGGTGTTTTCCATATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | AGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGCTCGGTGGGACCACATaGTTCGGATGGGCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFTKLPGASDKATNTSQWLGGTT*FGWAGL Trigger: AAGGCCAGCCCATCCGAATCATGTGGTCCCACCGAG...CCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCCGAGCCCCCAGCTCTaGCTCCCGCTTCTGTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: TPLASPNSLVLQTKPPTHPSPQL*LPLLSR Trigger: TCTCGACAGAAGCGGGAGGCAGAGCTGGGGGCTCGG...ATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAGGAGGTCCATGTGGCTaGGCTGTCCACCTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPGGPCG*AVHLGS Trigger: TGACCCCAGGTGGACAGCCCAGCCACATGGACCTCC...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | ATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACGCAGGCATCGTGGATaGGGGAGTAGAGACGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: MTPLASPNSLVLQTKPPTRRHRG*GSRDAP Trigger: GGGAGCGTCTCTACTCCCTCATCCACGATGCCTGCG...TGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CAGCCACTGCAAGTCTCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTAGACTTCCGAAGGCCTaGGTCTCGGTGGGACCACAT | + |
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Preference number: 4 (lower is better) Translates to: QPLQVSYDSFSFTKLPGARLPKA*VSVGPH Trigger: ATGTGGTCCCACCGAGACCCAGGCCTTCGGAAGTCT...AGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGAGACTTGCAGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCACTGGCACCCCTCAGGTaGATACAGGGATGCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPLAPLR*IQGCCV Trigger: GACGCAGCATCCCTGTATCCACCTGAGGGGTGCCAG...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | TCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCGGATCCCTCCCCACCTaGTCCTGTAGTCTGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: SYDSFSFTKLPGASDKATGSLPT*SCSLGT Trigger: GGTACCCAGACTACAGGACCAGGTGGGGAGGGATCC...GGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCACACGAGAAGCTGGCCTaGGATAGAGGATCCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPHEKLA*DRGSLP Trigger: GGGGAGGGATCCTCTATCCCAGGCCAGCTTCTCGTG...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAATAGAGCGAGGAGAGTaGGCAGCCATGGCCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPIERGE*AAMATC Trigger: ACAGGTGGCCATGGCTGCTCACTCTCCTCGCTCTAT...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | AGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGTCCCATTCATGGTGTTaGTGGCCTTCTGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SFTKLPGASDKATNTSQWSHSWC*WPSGQP Trigger: AGGCTGCCCAGAAGGCCATCAACACCATGAATGGGA...CCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | AGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGTGGATACAGGGATGCTaGGTCGTGCTTAGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFTKLPGASDKATNTSQWWIQGC*VVLRGW Trigger: CCAGCCTCTAAGCACGACGCAGCATCCCTGTATCCA...CCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATGTGTTGATGGCCTTCTaGGCAGCCTCGTGGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TPLASPNSLVLQTKPPTHVLMAF*AASWVS Trigger: CGAGACCCACGAGGCTGCCCAGAAGGCCATCAACAC...ATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCTGGCTGGAGACCTaGCTGGCACCCCTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LKNTEIPIRKEVRVHTARTWLET*LAPLRW Trigger: CCACCTGAGGGGTGCCAGCCAGGTCTCCAGCCAGGT...TCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CAGCCTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGTGTGAGGCACCTGGCTaGAGACCTGGCTGGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: QPSLHNQSSRTQRSPSGKCEAPG*RPGWHP Trigger: GGGGTGCCAGCCAGGTCTCCAGCCAGGTGCCTCACA...CTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | TTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTGTGCAGCGGCCAGCATaGACACAGTCAGAGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FTKLPGASDKATNTSQWVVQRPA*TQSEAD Trigger: ATCAGCCTCTGACTGTGTCCATGCTGGCCGCTGCAC...AACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | TTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTCCGCCTCTTCTATCTTaGCATGGAGGGACTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FTKLPGASDKATNTSQWVPPLLS*HGGTLG Trigger: CCCCAGAGTCCCTCCATGCCAAGATAGAAGAGGCGG...AACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAGGCACTGTGTACAGCTaGGGTTCCTCTATGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPGTVYS*GSSMWH Trigger: GTGCCACATAGAGGAACCTCAGCTGTACACAGTGCC...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | CTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGACCAGCAGCATGCCCGTaGTCTTGCCAGTCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LKNTEIPIRKEVRVHTARPAACP*SCQSVG Trigger: CCCCACTGACTGGCAAGATCACGGGCATGCTGCTGG...TCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATGTTTCGTGCCCACGATaGGCCCGTTCATCTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: TPLASPNSLVLQTKPPTHVSCPR*ARSSPS Trigger: TGACGGAGATGAACGGGCGCATCGTGGGCACGAAAC...ATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCATAGAGCGGTTTCGTaGCCACGATGCGCCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TPLASPNSLVLQTKPPTHHRAVS*PRCARS Trigger: TGAACGGGCGCATCGTGGGCACGAAACCGCTCTATG...ATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGACCTTCCGCTCCTCCTTaGGCTGTGCCAGGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRPSAPP*AVPGPH Trigger: ATGTGGCCCTGGCACAGCGCAAGGAGGAGCGGAAGG...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | AGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGCCAATCATCTGCTTTTaGTCGTGTAGGGGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SFTKLPGASDKATNTSQWPIICF*SCRGAA Trigger: CGCTGCACCCCTACACGAGCAAAAGCAGATGATTGG...CCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | GGGGGACTGTGTCAGCCTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCGACTCCTGGACCCCATaGGCACTGTGTACAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GGLCQPSLHNQSSRTQRSDSWTP*ALCTAE Trigger: CTCAGCTGTACACAGTGCCCATGGGGTCCAGGAGTC...GGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAGGCTGACACAGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGATCACATAGATGTTGGTaGACCCGAGGGCCCGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRSHRCW*TRGPEP Trigger: GGGCTCGGGCCCTCGGGTTCACCAACATCTATGTGA...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | CAGCCACTGCAAGTCTCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCATTTGTTCAAACCTaGGCTTCAGCTCGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QPLQVSYDSFSFTKLPGASFVQT*ASARSA Trigger: GGCAGAGCGAGCTGAAGCGCAGGTTTGAACAAATGA...AGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGAGACTTGCAGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCACGTCACGGCCTTCGTTaGCTCTTCTGGAGAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: PMTPLASPNSLVLQTKPPRHGLR*LFWRGK Trigger: TTTTCCTCTCCAGAAGAGGCAACGAAGGCCGTGACG...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | TCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCCACCTGGGGTCAGGTTaGATTGGAGTTATGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SYDSFSFTKLPGASDKATHLGSG*IGVMEP Trigger: TGGCTCCATAACTCCAATGCAACCTGACCCCAGGTG...GGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGATGGGAGAAGAGGTCCTaGAGCCTCTGCTCGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRWEKRS*SLCSST Trigger: CGTGGACGAGCAGAGGCTCCAGGACCTCTTCTCCCA...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAGATGGAGGTCCATGTaGCTGGGCTGTCCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KNTEIPIRKEVRVHTARTRWRSM*LGCPPG Trigger: CCCAGGTGGACAGCCCAGCCACATGGACCTCCATCT...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| 3UTR CAA 72 bp | CTTCAGACAAAGCCACCAACACATCACAGTGGGTTTTaGATCGCTGGGTTCTCTACGGAGTCTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LQTKPPTHHSGF*IAGFSTESPES Trigger: GCTCTCTGGAGACTCCGTAGAGAACCCAGCGATCAAAAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR TCA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCGACACAGTCAGAGGCTaGTGGCCAGGGACATACACG | + |
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Preference number: 4 (lower is better) Translates to: KNTEIPIRKEVRVHTARTDTVRG*WPGTYT Trigger: CGTGTATGTCCCTGGCCATCAGCCTCTGACTGTGTC...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | GGGGGACTGTGTCAGCCTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCCGGGATTGCCCATTaGTGTCTCTCATCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GGLCQPSLHNQSSRTQRSPGIAH*CLSSPS Trigger: TGAAGGTGATGAGAGACAGCAATGGGCAATCCCGGG...GGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAGGCTGACACAGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR GCA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGACCGAAGCCCCGGGATTaGCCATTGCTGTCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRPKPRD*PLLSLI Trigger: GATGAGAGACAGCAATGGGCAATCCCGGGGCTTCGG...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAGGCCTGGGTCTCGGTaGGACCACATGATTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: KNTEIPIRKEVRVHTARTRPGSR*DHMIRM Trigger: CATCCGAATCATGTGGTCCCACCGAGACCCAGGCCT...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATGTCGCCTATACTGGTTaGTCAAGATGGCCTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TPLASPNSLVLQTKPPTHVAYTG*SRWPSA Trigger: AGCGGAAGGCCATCTTGACCAACCAGTATAGGCGAC...ATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | TCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTTGGGGTCAGGTTGCATTaGAGTTATGGAGCCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SPNSLVLQTKPPTHHSGFGVRLH*SYGART Trigger: AGTTCTGGCTCCATAACTCCAATGCAACCTGACCCC...AAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS-3UTR CCA 90 bp | CTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAGTCGTGCTTAGAGGCTaGACCACAGAGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKNTEIPIRKEVRVHTARVVLRG*TTEAAG Trigger: TCCAGCTGCCTCTGTGGTCCAGCCTCTAAGCACGAC...TCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGACATGCTTCTCAAAGTTaGCAAAGCCGAAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKNTEIPIRKEVRVHTARHASQS*QSRSPG Trigger: CCCGGGGCTTCGGCTTTGTCAACTTTGAGAAGCATG...TCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACATCGTGGGTCTCGAAATaGACAAAGCCGAAACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SELKNTEIPIRKEVRVHTSWVSK*TKPKPR Trigger: GCGGGGTTTCGGCTTTGTGCATTTCGAGACCCACGA...TGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | TTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTTGCATATTTCCAAACTaGGAGAAGAGGTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTKLPGASDKATNTSQWVCIFPN*EKRSWS Trigger: GCTCCAGGACCTCTTCTCCCAGTTTGGAAATATGCA...AACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | CTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTGCTGGGCTGTCCACCTaGGGTCAGGTTGCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHYIIRAQEHRDPHQERSAGLST*GQVALE Trigger: CTCCAATGCAACCTGACCCCAGGTGGACAGCCCAGC...ACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | TCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTTCCTGGTCCTGTAGTCTaGGTACCAATGTTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPNSLVLQTKPPTHHSGFPGPVV*VPMLTT Trigger: AGTAGTCAACATTGGTACCCAGACTACAGGACCAGG...AAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | TCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTTCTTCGTTGCCTCTTCTaGAGAGGAAAAGCACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPNSLVLQTKPPTHHSGFLRCLF*RGKAHK Trigger: TTTGTGTGCTTTTCCTCTCCAGAAGAGGCAACGAAG...AAACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACATCTTCTATCTTGGCATaGAGGGACTCTGGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SELKNTEIPIRKEVRVHTSSILA*RDSGDS Trigger: GGAGTCCCCAGAGTCCCTCCATGCCAAGATAGAAGA...TGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGGATGGAAAGGATATTaGCGATCGGGGAGAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SELKNTEIPIRKEVRVHTGWKGY*RSGRTS Trigger: AGATGTTCTCCCCGATCGGCAATATCCTTTCCATCC...TGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR GCA 90 bp | ATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACATTCTGGGCTTCCTCATaGTTCTCAAAGTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTPLASPNSLVLQTKPPTFWASS*FSKLTK Trigger: CTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAA...TGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR GCA 90 bp | CTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTGACTCCATTTCTCGATaGACCTGCAGTACTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LHYIIRAQEHRDPHQERSDSISR*TCSTAT Trigger: GGTGGCAGTACTGCAGGTGCATCGAGAAATGGAGTC...ACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CCA 90 bp | AACCAAGAGCAGAAATGCAGTAATCAAGTAGTCAAGGGAGTGAAGATTCCATTTGGGCGTCGCCTATACTaGTTGGTCAAGATGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQEQKCSNQVVKGVKIPFGRRLY*LVKMAF Trigger: GAAGGCCATCTTGACCAACCAGTATAGGCGACGCCC...AAATGGAATCTTCACTCCCTTGACTACTTGATTACTGCATTTCTGCTCTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 90 bp | TCCGCTCCTCCTTGCGCTGTGCCAGGGCCACATAGAGCGGTTTCGTaGCCACGATGCGCCCGTTCATCTCCGTCACGGCCTTCGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPPCAVPGPHRAVS*PRCARSSPSRPSLP Trigger: AGGCAACGAAGGCCGTGACGGAGATGAACGGGCGCATCGTGGGCACGAAACCGCTCTATGTGGCCCTGGCACAGCGCAAGGAGGAGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 90 bp | CCTTGCGCTGTGCCAGGGCCACATAGAGCGGTTTCGTGCCCACGATaGGCCCGTTCATCTCCGTCACGGCCTTCGTTGCCTCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCAVPGPHRAVSCPR*ARSSPSRPSLPLLE Trigger: CTCCAGAAGAGGCAACGAAGGCCGTGACGGAGATGAACGGGCGCATCGTGGGCACGAAACCGCTCTATGTGGCCCTGGCACAGCGCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 90 bp | CTGCTTCATTTGTTCAAACCTGCGCTTCAGCTCGCTCTGCCGTTCTaGCCGCTTCTGGGCCCGACCCACATAGAGCAGCTGCCCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLHLFKPALQLALPF*PLLGPTHIEQLPAH Trigger: GTGAGCGGGCAGCTGCTCTATGTGGGTCGGGCCCAGAAGCGGGCAGAACGGCAGAGCGAGCTGAAGCGCAGGTTTGAACAAATGAAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS TCA 90 bp | CGAGGGCCCGAGCCCCCAGCTCTGCCTCCCGCTTCTGTCGAGACTTaGAATGGCCTACAAAGACTTTCCGGTCGTTCAGCAACATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGPEPPALPPASVET*NGLQRLSGRSATSH Trigger: ATGGGATGTTGCTGAACGACCGGAAAGTCTTTGTAGGCCATTTCAAGTCTCGACAGAAGCGGGAGGCAGAGCTGGGGGCTCGGGCCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS TCA 90 bp | CCTGGTCCTGTAGTCTGGGTACCAATGTTGACTACTCTCTGCGTGTaGGGCACCTGGCTGGAGACCTGGCTGGCACCCCTCAGGTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: PGPVVWVPMLTTLCV*GTWLETWLAPLRWI Trigger: TATCCACCTGAGGGGTGCCAGCCAGGTCTCCAGCCAGGTGCCTCACACGCAGAGAGTAGTCAACATTGGTACCCAGACTACAGGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 90 bp | TGGAGGTCCATGTGGCTGGGCTGTCCACCTGGGGTCAGGTTGCATTaGAGTTATGGAGCCAGAACTGTAGTACACAGCCTGGGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRSMWLGCPPGVRLH*SYGARTVVHSLGCR Trigger: TCTACAGCCCAGGCTGTGTACTACAGTTCTGGCTCCATAACTCCAATGCAACCTGACCCCAGGTGGACAGCCCAGCCACATGGACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 90 bp | CTTCACATAGATGTTGGTGAACCCGAGGGCCCGAGCCCCCAGCTCTaGCTCCCGCTTCTGTCGAGACTTGAAATGGCCTACAAAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHIDVGEPEGPSPQL*LPLLSRLEMAYKDF Trigger: AAAGTCTTTGTAGGCCATTTCAAGTCTCGACAGAAGCGGGAGGCAGAGCTGGGGGCTCGGGCCCTCGGGTTCACCAACATCTATGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | CCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAAGCATGCCCGTGATCTaGCCAGTCAGTGGGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PMTPLASPNSLVLQTKPPSMPVI*PVSGAQ Trigger: CTGCGCCCCACTGACTGGCAAGATCACGGGCATGCT...TGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS TCA 90 bp | TCATGTGGTCCACGGCCTTCTGGGCTTCCTCATGCTTCTCAAAGTTaGCAAAGCCGAAGCCCCGGGATTGCCCATTGCTGTCTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SCGPRPSGLPHASQS*QSRSPGIAHCCLSS Trigger: TGATGAGAGACAGCAATGGGCAATCCCGGGGCTTCGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGCCGTGGACCACATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 90 bp | CCATTTCTCGATGCACCTGCAGTACTGCCACCGCCTCTTCTATCTTaGCATGGAGGGACTCTGGGGACTCCAGCAATAACAGAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PFLDAPAVLPPPLLS*HGGTLGTPAITEAP Trigger: TGGAGCTTCTGTTATTGCTGGAGTCCCCAGAGTCCCTCCATGCCAAGATAGAAGAGGCGGTGGCAGTACTGCAGGTGCATCGAGAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | TCCTATGACTCCTTTAGCTTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCTGGGGTCAGGTTGCATaGGAGTTATGGAGCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SYDSFSFTKLPGASDKATWGQVA*ELWSQN Trigger: GTTCTGGCTCCATAACTCCAATGCAACCTGACCCCA...GGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAAGCTAAAGGAGTCATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | TTCACCAAACTCCCTGGTGCTTCAGACAAAGCCACCAACACATCACAGTGGGTTCCTCTCCTGCTTCATTaGTTCAAACCTGCGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTKLPGASDKATNTSQWVPLLLH*FKPALQ Trigger: CTGAAGCGCAGGTTTGAACAAATGAAGCAGGAGAGG...AACCCACTGTGATGTGTTGGTGGCTTTGTCTGAAGCACCAGGGAGTTTGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACACCGTCACGGCCTTCGTaGCCTCTTCTGGAGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SELKNTEIPIRKEVRVHTPSRPS*PLLERK Trigger: TTTCCTCTCCAGAAGAGGCAACGAAGGCCGTGACGG...TGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGACGTCGCCTATACTGGTaGGTCAAGATGGCCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRRRLYW*VKMAFR Trigger: GCGGAAGGCCATCTTGACCAACCAGTATAGGCGACG...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGACCACCTGGGGTCAGGTaGCATTGGAGTTATGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRPPGVR*HWSYGA Trigger: GGCTCCATAACTCCAATGCAACCTGACCCCAGGTGG...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCACCGCCTCTTCTATCTaGGCATGGAGGGACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNTEIPIRKEVRVHTARTTASSI*AWRDSG Trigger: CCCAGAGTCCCTCCATGCCAAGATAGAAGAGGCGGT...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | CTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGAAGTCCCCGGGATTGCCCATaGCTGTCTCTCATCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHYIIRAQEHRDPHQERSPRDCP*LSLITF Trigger: GAAGGTGATGAGAGACAGCAATGGGCAATCCCGGGG...ACTTCTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | AAGAACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCCGGATGGGCTGGCCTTaGATCACCTCAAAGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEIPIRKEVRVHTARTRMGWP*ITSKFI Trigger: AATGAACTTTGAGGTGATCAAAGGCCAGCCCATCCG...GGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGACAAAGCCAAAGCCCTaGCTGTGGCTACTTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSLHNQSSRTQRSPSGKTKPKP*LWLLSV Trigger: GACAGAAAGTAGCCACAGCAAGGGCTTTGGCTTTGT...CTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGAGTGTCATACAGAGCCTaGTTGTCGATGGAATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRVSYRA*LSMEFS Trigger: GGAGAATTCCATCGACAACAAGGCTCTGTATGACAC...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGATCCCCATCAGGAAAGAAGTTAGAGTTCACACAGCTAGAACCAAGACGCTTCTGTCGAGACTaGAAATGGCCTACAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TQRSPSGKKLEFTQLEPRRFCRD*KWPTKT Trigger: AGTCTTTGTAGGCCATTTCAAGTCTCGACAGAAGCG...TCTTGGTTCTAGCTGTGTGAACTCTAACTTCTTTCCTGATGGGGATCTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTCATTACATAATCAGAGCTCAAGAACACAGAGATCCCCATCAGGAAAGTTTTTGATAAAGATGTaGCCCATACCAGACTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QPSLHNQSSRTQRSPSGKFLIKM*PIPDFR Trigger: TCGGAAGTCTGGTATGGGCAACATCTTTATCAAAAA...CTTTCCTGATGGGGATCTCTGTGTTCTTGAGCTCTGATTATGTAATGAAGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | CCTTGCGCTGTGCCAGGGCCACATAGAGCGGTTTCGTaGCCACGATGCGCCCGTTCATCTCCGTCACGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCAVPGPHRAVS*PRCARSSPSRP Trigger: AGGCCGTGACGGAGATGAACGGGCGCATCGTGGGCACGAAACCGCTCTATGTGGCCCTGGCACAGCGCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 72 bp | CTCTCTGCGTGTGAGGCACCTGGCTGGAGACCTGGCTaGCACCCCTCAGGTGGATACAGGGATGCTGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSACEAPGWRPG*HPSGGYRDAAS Trigger: CGACGCAGCATCCCTGTATCCACCTGAGGGGTGCCAGCCAGGTCTCCAGCCAGGTGCCTCACACGCAGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | GTGCCAGGGCCACATAGAGCGGTTTCGTGCCCACGATaGGCCCGTTCATCTCCGTCACGGCCTTCGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPGPHRAVSCPR*ARSSPSRPSLP Trigger: AGGCAACGAAGGCCGTGACGGAGATGAACGGGCGCATCGTGGGCACGAAACCGCTCTATGTGGCCCTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS TCA 72 bp | GGCCGACTCCTGGACCCCATGGGCACTGTGTACAGCTaGGGTTCCTCTATGTGGCACGAGAAGCTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLLDPMGTVYS*GSSMWHEKLAW Trigger: CCAGGCCAGCTTCTCGTGCCACATAGAGGAACCTCAGCTGTACACAGTGCCCATGGGGTCCAGGAGTCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | GATGTTGGTGAACCCGAGGGCCCGAGCCCCCAGCTCTaGCTCCCGCTTCTGTCGAGACTTGAAATGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: DVGEPEGPSPQL*LPLLSRLEMAY Trigger: GTAGGCCATTTCAAGTCTCGACAGAAGCGGGAGGCAGAGCTGGGGGCTCGGGCCCTCGGGTTCACCAACATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | ACCTGGCTGGCACCCCTCAGGTGGATACAGGGATGCTaGGTCGTGCTTAGAGGCTGGACCACAGAGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TWLAPLRWIQGC*VVLRGWTTEAA Trigger: AGCTGCCTCTGTGGTCCAGCCTCTAAGCACGACGCAGCATCCCTGTATCCACCTGAGGGGTGCCAGCCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | TTGTTCAAACCTGCGCTTCAGCTCGCTCTGCCGTTCTaGCCGCTTCTGGGCCCGACCCACATAGAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFKPALQLALPF*PLLGPTHIEQL Trigger: CAGCTGCTCTATGTGGGTCGGGCCCAGAAGCGGGCAGAACGGCAGAGCGAGCTGAAGCGCAGGTTTGAACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS GCA 72 bp | GTTGGTCAAGATGGCCTTCCGCTCCTCCTTGCGCTGTaGCAGGGCCACATAGAGCGGTTTCGTGCCCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: VGQDGLPLLLAL*QGHIERFRAHD Trigger: ATCGTGGGCACGAAACCGCTCTATGTGGCCCTGGCACAGCGCAAGGAGGAGCGGAAGGCCATCTTGACCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 72 bp | TGGCCAGGGACATACACGGCCGACTCCTGGACCCCATaGGCACTGTGTACAGCTGAGGTTCCTCTATGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WPGTYTADSWTP*ALCTAEVPLCG Trigger: GCCACATAGAGGAACCTCAGCTGTACACAGTGCCCATGGGGTCCAGGAGTCGGCCGTGTATGTCCCTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CAA 90 bp | GGTAGATGGAGGTCCATGTGGCTGGGCTGTCCACCTGGGGTCAGGTaGCATTGGAGTTATGGAGCCAGAACTGTAGTACACAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRWRSMWLGCPPGVR*HWSYGARTVVHSLG Trigger: GCCCAGGCTGTGTACTACAGTTCTGGCTCCATAACTCCAATGCAACCTGACCCCAGGTGGACAGCCCAGCCACATGGACCTCCATCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 72 bp | TTGCCCATACCAGACTTCCGAAGGCCTGGGTCTCGGTaGGACCACATGATTCGGATGGGCTGGCCTTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LPIPDFRRPGSR*DHMIRMGWPLI Trigger: GATCAAAGGCCAGCCCATCCGAATCATGTGGTCCCACCGAGACCCAGGCCTTCGGAAGTCTGGTATGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 72 bp | GATAAAGATGTTGCCCATACCAGACTTCCGAAGGCCTaGGTCTCGGTGGGACCACATGATTCGGATGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DKDVAHTRLPKA*VSVGPHDSDGL Trigger: CAGCCCATCCGAATCATGTGGTCCCACCGAGACCCAGGCCTTCGGAAGTCTGGTATGGGCAACATCTTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
||
| CDS CCA 72 bp | ACCTGCAGTACTGCCACCGCCTCTTCTATCTTGGCATaGAGGGACTCTGGGGACTCCAGCAATAACAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TCSTATASSILA*RDSGDSSNNRS Trigger: GCTTCTGTTATTGCTGGAGTCCCCAGAGTCCCTCCATGCCAAGATAGAAGAGGCGGTGGCAGTACTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CAA 90 bp | ATAAAGGTTCACACCCTGGTAGCGGTTCTGCCTCTCCTGCTTCATTaGTTCAAACCTGCGCTTCAGCTCGCTCTGCCGTTCTGCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: IKVHTLVAVLPLLLH*FKPALQLALPFCPL Trigger: AAGCGGGCAGAACGGCAGAGCGAGCTGAAGCGCAGGTTTGAACAAATGAAGCAGGAGAGGCAGAACCGCTACCAGGGTGTGAACCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CCA 72 bp | CCCAGCTCTGCCTCCCGCTTCTGTCGAGACTTGAAATaGCCTACAAAGACTTTCCGGTCGTTCAGCAACATC | + |
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Preference number: 6 (lower is better) Translates to: PSSASRFCRDLK*PTKTFRSFSNI Trigger: GATGTTGCTGAACGACCGGAAAGTCTTTGTAGGCCATTTCAAGTCTCGACAGAAGCGGGAGGCAGAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CAA 72 bp | TTGTCGATGGAATTCTCCAAGTTTTTGATAAAGATGTaGCCCATACCAGACTTCCGAAGGCCTGGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LSMEFSKFLIKM*PIPDFRRPGSR Trigger: CCGAGACCCAGGCCTTCGGAAGTCTGGTATGGGCAACATCTTTATCAAAAACTTGGAGAATTCCATCGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CAA 90 bp | TGGGTCTCGAAATGCACAAAGCCGAAACCCCGCGATCCATGTTCATaGTATACTACCTTAGAAGAGAGAATGCTCCCAAAAGTAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: WVSKCTKPKPRDPCS*YTTLEERMLPKVEK Trigger: CTTCTCTACTTTTGGGAGCATTCTCTCTTCTAAGGTAGTATACAATGAACATGGATCGCGGGGTTTCGGCTTTGTGCATTTCGAGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CAA 72 bp | AAATGCACAAAGCCGAAACCCCGCGATCCATGTTCATaGTATACTACCTTAGAAGAGAGAATGCTCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: KCTKPKPRDPCS*YTTLEERMLPK Trigger: TTTTGGGAGCATTCTCTCTTCTAAGGTAGTATACAATGAACATGGATCGCGGGGTTTCGGCTTTGTGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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| CDS CAA 90 bp | GAGAGAATGCTCCCAAAAGTAGAGAAGGTGTCATACAGAGCCTTGTaGTCGATGGAATTCTCCAAGTTTTTGATAAAGATGTTGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: ERMLPKVEKVSYRAL*SMEFSKFLIKMLPI Trigger: TATGGGCAACATCTTTATCAAAAACTTGGAGAATTCCATCGACAACAAGGCTCTGTATGACACCTTCTCTACTTTTGGGAGCATTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067715.5 |
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