Pregenerated sensors for P4HTM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006675Ensembl transcript IDs: ENSMUST00000006853.11, ENSMUST00000192080.6, ENSMUST00000193621.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTCCCGTGTGAGAAGTGAAGTGACTCTCTCAGGAGTCCTTAGGTaGGGGTGTGGGAGAGAAAGATGCAGGCTGACTGGTACTCGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RSRVRSEVTLSGVLR*GCGRERCRLTGTRD Trigger: GTCCCGAGTACCAGTCAGCCTGCATCTTTCTCTCCCACACCCTCACCTAAGGACTCCTGAGAGAGTCACTTCACTTCTCACACGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR TCA 90 bp | AAGGAGGTACATGTGCCTGCGGGCTATATCCATCCCCAGACCTGCTaGAGGCAGAATGGAAACAGGCCCCGTGTATGTCAACCTCGAACT | + |
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Preference number: 1 (lower is better) Translates to: KEVHVPAGYIHPQTC*RQNGNRPRVCQPRT Trigger: AGTTCGAGGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGGGATGGATATAGCCCGCAGGCACATGTACCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR TCA 90 bp | AACAGGCCCCGTGTATGTCAACCTCGAACTAAGGCCTGGCTAAGATaGGAGGACAGGAACCAGGAAGACATGTGGCTGGGACCTAACTAC | + |
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Preference number: 1 (lower is better) Translates to: NRPRVCQPRTKAWLR*EDRNQEDMWLGPNY Trigger: GTAGTTAGGTCCCAGCCACATGTCTTCCTGGTTCCTGTCCTCTCATCTTAGCCAGGCCTTAGTTCGAGGTTGACATACACGGGGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR GCA 90 bp | TTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTaGGGGCTATATCCATCCCCAGACCTGCTGAAGGCAGAATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FSDSHEGSQKGGTCA*GLYPSPDLLKAEWK Trigger: TTTCCATTCTGCCTTCAGCAGGTCTGGGGATGGATATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR GCA 90 bp | TGCCAGGGCATGAGTGAAGAAGACACAGGAACGCCGAGATCTCAGTaGAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACAT | + |
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Preference number: 1 (lower is better) Translates to: CQGMSEEDTGTPRSQ*SSVIAMKEARKEVH Trigger: ATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCTGTGTCTTCTTCACTCATGCCCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACCTGCTGAAGGCAGAATGGAAACAGGCCCCGTGTATGTCAACCTCGAAGAGGAGAAAGTAGGATaGACCCCAGGCTGGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PRPAEGRMETGPVYVNLEEEKVG*TPGWGH Trigger: ATGCCCCCAGCCTGGGGTCCATCCTACTTTCTCCTC...TTCGAGGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTATATCGCCTGGGGTAGCATTTaGCTACAGAGGCCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: VIAMKEARKEVHVPAGYIAWGSI*LQRPGL Trigger: TAGCCCTGGCCTCTGTAGTCAAATGCTACCCCAGGC...GATATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGACCTGCTGAAGGCAGAATGGAAACAGGCCCCGTGTATGTCAACCTCGAAAAGGCCTGGCTAAGATaGGAGGACAGGAACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PRPAEGRMETGPVYVNLEKAWLR*EDRNQE Trigger: TTCCTGGTTCCTGTCCTCTCATCTTAGCCAGGCCTT...TTCGAGGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATCATCCCCAGACCTGCTaGAGGCAGAATGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: RSQCSSVIAMKEARKEVHHPQTC*RQNGNR Trigger: CCTGTTTCCATTCTGCCTTCAGCAGGTCTGGGGATG...ATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATCTGCTGAAGGCAGAATaGAAACAGGCCCCGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: RSQCSSVIAMKEARKEVHLLKAE*KQAPCM Trigger: CATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAG...ATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR GCA 72 bp | CGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCTaGAGGGTCTTTGACGTTGGGCAGCGGGTGATTCGC | + |
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Preference number: 3 (lower is better) Translates to: RPELQSAVGQRT*RVFDVGQRVIR Trigger: GCGAATCACCCGCTGCCCAACGTCAAAGACCCTGCAGGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| 3UTR TCA 72 bp | TCAGTCTGCAGTAGGACAGAGGACCTGCAGGGTCTTTaGCGTTGGGCAGCGGGTGATTCGCATCAGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SVCSRTEDLQGL*RWAAGDSHQGL Trigger: AAGGCCCTGATGCGAATCACCCGCTGCCCAACGTCAAAGACCCTGCAGGTCCTCTGTCCTACTGCAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCGTAGGAACTGCGCCTTaGATCGCGGCTGCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTVGTAP*IAAAGR Trigger: CCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTAC...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| 3UTR TCA 72 bp | CATGTGCCTGCGGGCTATATCCATCCCCAGACCTGCTaGAGGCAGAATGGAAACAGGCCCCGTGTATGTCAA | + |
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Preference number: 3 (lower is better) Translates to: HVPAGYIHPQTC*RQNGNRPRVCQ Trigger: TTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGGGATGGATATAGCCCGCAGGCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR GCA 72 bp | AGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTaGGGGCTATATCCATCCCCAGACCTGCTGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SHEGSQKGGTCA*GLYPSPDLLKA Trigger: TGCCTTCAGCAGGTCTGGGGATGGATATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| 3UTR TCA 72 bp | GTGAGAAGTGAAGTGACTCTCTCAGGAGTCCTTAGGTaGGGGTGTGGGAGAGAAAGATGCAGGCTGACTGGT | + |
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Preference number: 3 (lower is better) Translates to: VRSEVTLSGVLR*GCGRERCRLTG Trigger: ACCAGTCAGCCTGCATCTTTCTCTCCCACACCCTCACCTAAGGACTCCTGAGAGAGTCACTTCACTTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | TGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTAGGGCAAGAGAAGGTTGGCACTGGCTaGGGGCTCTGCTCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CRNCAFDRGCRQGGLGQEKVGTG*GLCSRR Trigger: GCGCCGCGAGCAGAGCCCCCAGCCAGTGCCAACCTT...CTCTTGCCCTAGCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | CGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGTGCCCTCCAGCCGGGTaGGGGGACCCAAGGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRPLAGSPVVLFNGAAWRCPPAG*GDPRLA Trigger: TGCCAACCTTGGGTCCCCTCACCCGGCTGGAGGGCA...CCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | TGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTAGGGCAAGAGGGCGGATGGCACGCATaGCGTGATGTGCTCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CRNCAFDRGCRQGGLGQEGGWHA*RDVLPL Trigger: GAGAGGGAGCACATCACGTCATGCGTGCCATCCGCC...CTCTTGCCCTAGCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCTGCACTTGGTGCCGCGGGTaGCCAGGCAGCCCCCATGCA | + |
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Preference number: 4 (lower is better) Translates to: ARARGRPELQSAVGQRTCTWCRG*PGSPHA Trigger: TGCATGGGGGCTGCCTGGTCACCCGCGGCACCAAGT...GCAGGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | AATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCCCGCGGCTTGCACAGTaGCCGCACCGGGGCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NNVNVGTAPLIAAAGREGPRLAQ*PHRGVF Trigger: GAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGG...GCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | CAGTCTGCAGTAGGACAGAGGACCTGCAGGGTCTTTGACGTTGGGCAGCGGGTGAGGGTTCGGATGAAGTaGTCCCTGCCCGCGACCACC | + |
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Preference number: 4 (lower is better) Translates to: QSAVGQRTCRVFDVGQRVRVRMK*SLPATT Trigger: GGTGGTCGCGGGCAGGGATCACTTCATCCGAACCCT...CACCCGCTGCCCAACGTCAAAGACCCTGCAGGTCCTCTGTCCTACTGCAGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTGCTGAAGGCAGAATGGAAACAGGCCCCGTGTATGTCAACCTCGAACCGCGGCTTGCACAGTaGCCGCACCGGGGCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PRPAEGRMETGPVYVNLEPRLAQ*PHRGVF Trigger: GAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGG...TTCGAGGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | TGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTAGGGCAAGAGTGTGCTCCCTCTCCCTaGTGGAGCCATGTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CRNCAFDRGCRQGGLGQECAPSP*WSHVWW Trigger: CCACCACACATGGCTCCACCAGGGAGAGGGAGCACA...CTCTTGCCCTAGCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | AGGGCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCAGGCGCAGGACCCTCTaGCGGATGGCACGCATGACG | + |
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Preference number: 4 (lower is better) Translates to: RARARGRPELQSAVGQRTRRRTL*RMARMT Trigger: CGTCATGCGTGCCATCCGCCAGAGGGTCCTGCGCCT...GGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGCCGGGGAGAGGCGAGTaGGGCGCAGGACCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGREPGRGE*GAGPSG Trigger: GCCAGAGGGTCCTGCGCCTCACTCGCCTCTCCCCGG...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | GCTCGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGTCCAGCTGGCTGACCTaGATGGCGCTCATCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ARRPLAGSPVVLFNGAAWSSWLT*MALIAS Trigger: GGAGGCGATGAGCGCCATGCAGGTCAGCCAGCTGGA...CCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CAGTCTGCAGTAGGACAGAGGACCTGCAGGGTCTTTGACGTTGGGCAGCGGGTGGGAGCAGATGGTCTCTaGGTACACGGGTCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QSAVGQRTCRVFDVGQRVGADGL*VHGSAV Trigger: GACAGCGGACCCGTGTACCCAGAGACCATCTGCTCC...CACCCGCTGCCCAACGTCAAAGACCCTGCAGGTCCTCTGTCCTACTGCAGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGTCAGCCTCAGGCCGCTaGACGGTCGCCACCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGRESASGR*TVATAA Trigger: GGCAGCGGTGGCGACCGTGCAGCGGCCTGAGGCTGA...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | TCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTATTCAGCCTCAGGCCGCTaGACGGTCGCCACCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SVIAMKEARKEVHVPAGYSASGR*TVATAA Trigger: GGCAGCGGTGGCGACCGTGCAGCGGCCTGAGGCTGA...ATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGAATGGAAACAGGCCCCGTGTATGTCAACCTCGAACTAAGGCCTGGCGAGGGGACCCAAGGTTaGCACTGGCTGGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EGRMETGPVYVNLELRPGEGTQG*HWLGAL Trigger: CAGAGCCCCCAGCCAGTGCCAACCTTGGGTCCCCTC...GCCAGGCCTTAGTTCGAGGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTTTCCCAGGCGAGTCTaGGCCAGGACCTCTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLFPRRV*ARTSRS Trigger: GCTCCGAGAGGTCCTGGCCCAGACTCGCCTGGGAAA...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | AGGGCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCCGGCCACTGAAGATTTaGGGCCTCCTCGACTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RARARGRPELQSAVGQRTRPLKI*GLLDCL Trigger: GAGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCG...GGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | TCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTATTGCCCTCCAGCCGGGTaGGGGGACCCAAGGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SVIAMKEARKEVHVPAGYCPPAG*GDPRLA Trigger: TGCCAACCTTGGGTCCCCTCACCCGGCTGGAGGGCA...ATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | GTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCAAGGTTGGCACTGGCTaGGGGCTCTGCTCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VQFSDSHEGSQKGGTCACKVGTG*GLCSRR Trigger: GCGCCGCGAGCAGAGCCCCCAGCCAGTGCCAACCTT...GCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR TCA 90 bp | AGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAATGCCCTCCAGCCGGGTaGGGGGACCCAAGGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RNAEISVQFSDSHEGSQKCPPAG*GDPRLA Trigger: TGCCAACCTTGGGTCCCCTCACCCGGCTGGAGGGCA...TTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTGCAGTAGGACAGAGGACCTGCAGGGTCTTTGACGTTGGGCAGCGGGTGATAGGTCCTGTTGTCTaGCACAGGGAAGACGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSAVGQRTCRVFDVGQRVIGPVV*HREDGL Trigger: GAGACCGTCTTCCCTGTGGCAGACAACAGGACCTAT...CACCCGCTGCCCAACGTCAAAGACCCTGCAGGTCCTCTGTCCTACTGCAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTAAAGGTTGGCACTGGCTaGGGGCTCTGCTCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PRSQCSSVIAMKEARKEVKVGTG*GLCSRR Trigger: GCGCCGCGAGCAGAGCCCCCAGCCAGTGCCAACCTT...TACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGACCCAAGGTTGGCACTaGCTGGGGGCTCTGCTCGCG | + |
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Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGRETQGWH*LGALLA Trigger: CGCGAGCAGAGCCCCCAGCCAGTGCCAACCTTGGGT...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | ACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGACCCAAGGTTGGCACTaGCTGGGGGCTCTGCTCGCG | + |
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Preference number: 4 (lower is better) Translates to: TPRSQCSSVIAMKEARKETQGWH*LGALLA Trigger: CGCGAGCAGAGCCCCCAGCCAGTGCCAACCTTGGGT...CTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | GTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCACCCAAGGTTGGCACTaGCTGGGGGCTCTGCTCGCG | + |
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Preference number: 4 (lower is better) Translates to: VQFSDSHEGSQKGGTCACTQGWH*LGALLA Trigger: CGCGAGCAGAGCCCCCAGCCAGTGCCAACCTTGGGT...GCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGAGGGGACCCAAGGTTaGCACTGGCTGGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGREEGTQG*HWLGAL Trigger: CAGAGCCCCCAGCCAGTGCCAACCTTGGGTCCCCTC...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | TGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTAGGGCAAGAGTCCTCACCAGCTCATTaGATTCTGCCTTATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CRNCAFDRGCRQGGLGQESSPAH*ILPYGS Trigger: GGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGA...CTCTTGCCCTAGCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | AATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTGGTGGAGCCATGTGTaGTGGCTGTTCCTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NNVNVGTAPLIAAAGREGWWSHV*WLFLTS Trigger: GCTGGTGAGGAACAGCCACCACACATGGCTCCACCA...GCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | GGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGAGGGTTCGGATGAAGTaGTCCCTGCCCGCGACCACC | + |
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Preference number: 4 (lower is better) Translates to: GTPRSQCSSVIAMKEARKRVRMK*SLPATT Trigger: GGTGGTCGCGGGCAGGGATCACTTCATCCGAACCCT...CTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGAGAGGTCCAGCTGGCTaGCCTGCATGGCGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGRERGPAG*PAWRSS Trigger: CGATGAGCGCCATGCAGGTCAGCCAGCTGGACCTCT...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | GGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGAGGCACGGGAACAGATaGCCCGCGGCTTGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTPRSQCSSVIAMKEARKRHGNR*PAACTV Trigger: CACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCT...CTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGAGGGGACCCAAGGTTaGCACTGGCTGGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSSVIAMKEARKEVHVPEGTQG*HWLGAL Trigger: CAGAGCCCCCAGCCAGTGCCAACCTTGGGTCCCCTC...AGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | TGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGGGCTAGGGCAAGAGCTCCTGAATGTTCTCTaGAGTCATCCACCGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CRNCAFDRGCRQGGLGQELLNVL*SHPPSI Trigger: AATGGACGGTGGATGACTCCAGAGAACATTCAGGAG...CTCTTGCCCTAGCCCTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR TCA 90 bp | ATGAGTGAAGAAGACACAGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCAGGGTTCGGATGAAGTaGTCCCTGCCCGCGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: MSEEDTGTPRSQCSSVIARVRMK*SLPATT Trigger: GGTGGTCGCGGGCAGGGATCACTTCATCCGAACCCT...GGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCTGTGTCTTCTTCACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR TCA 90 bp | ATGAGTGAAGAAGACACAGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCAGAGGTCCAGCTGGCTaGCCTGCATGGCGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: MSEEDTGTPRSQCSSVIARGPAG*PAWRSS Trigger: CGATGAGCGCCATGCAGGTCAGCCAGCTGGACCTCT...GGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCTGTGTCTTCTTCACTCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCGCAGGGCCAGCACGTTaGCCAAGTACAGGTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTAGPAR*PSTGAR Trigger: TCGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGC...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR GCA 90 bp | TCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTATGCAGGGCCAGCACGTTaGCCAAGTACAGGTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SVIAMKEARKEVHVPAGYAGPAR*PSTGAR Trigger: TCGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGC...ATAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTTCATCTGTGCCAGGTaGATGATGAGCCGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLFICAR*MMSRHS Trigger: GGAGTGTCGGCTCATCATCCACCTGGCACAGATGAA...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCTGGAAGAGGTCCAGCTaGCTGACCTGCATGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTWKRSS*LTCMAL Trigger: GAGCGCCATGCAGGTCAGCCAGCTGGACCTCTTCCA...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTATGGAAGAGGTCCAGCTaGCTGACCTGCATGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSDSHEGSQKGGTCACGLWKRSS*LTCMAL Trigger: GAGCGCCATGCAGGTCAGCCAGCTGGACCTCTTCCA...TAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGCTCCTCATGTACTTGTaGAAGTCTCGGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ARRPLAGSPVVLFNGAAWLLMYL*KSRRSM Trigger: CATGGACCTCCGAGACTTCCACAAGTACATGAGGAG...CCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CCAATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGCGAGCCATCTCCTGCTaGAACAAGGCTTGCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PINNVNVGTAPLIAAAGRRAISC*NKACRA Trigger: GGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCG...CCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR TCA 90 bp | TGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGCGGCCACTGAAGATTTaGGGCCTCCTCGACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSVIAMKEARKEVHVPARPLKI*GLLDCL Trigger: GAGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCG...CGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGAGAGGTCCAGCTGGCTaGCCTGCATGGCGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SQCSSVIAMKEARKEVHVRGPAG*PAWRSS Trigger: CGATGAGCGCCATGCAGGTCAGCCAGCTGGACCTCT...CACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGTCCAGCTGGCTGACCTaGATGGCGCTCATCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCSSVIAMKEARKEVHVSSWLT*MALIAS Trigger: GGAGGCGATGAGCGCCATGCAGGTCAGCCAGCTGGA...CACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCACGCATGACGTGATGTaGTCCCTCTCCCTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTTHDVM*SLSLVE Trigger: CTCCACCAGGGAGAGGGAGCACATCACGTCATGCGT...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | CGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGGTTGTACCAAAAGACTaGAGTTCCTTGCTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRPLAGSPVVLFNGAAWRVVPKD*SSLLGL Trigger: AAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAAC...CCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | CCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTATGGAAGAGGTCCAGCTaGCTGACCTGCATGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQCSSVIAMKEARKEVWKRSS*LTCMAL Trigger: GAGCGCCATGCAGGTCAGCCAGCTGGACCTCTTCCA...TACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCCTCGGAGGTCCATGTTaGAAAATTCCTGCAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RARARGRPELQSAVGQRTLGGPC*KIPADS Trigger: TGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAG...GGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACTTGCCCAAGTACAGGTaGACGAACACCATCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLAGSPVVLFNGAAWRLYLPKYR*TNTIST Trigger: GGTGCTGATGGTGTTCGTGCACCTGTACTTGGGCAA...GTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCTGCATGTTGGAAAATTCCTaGAGACTCAGCACGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ARARGRPELQSAVGQRTCMLENS*RLSTPS Trigger: TGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACAT...GCAGGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CCAATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGCCTCATACTCCTCAGTaGGCAGGATCTGGCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PINNVNVGTAPLIAAAGRPHTPQ*AGSGFA Trigger: AGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGG...CCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | ACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGCCTCATACTCCTCAGTaGGCAGGATCTGGCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPRSQCSSVIAMKEARKEPHTPQ*AGSGFA Trigger: AGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGG...CTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | TGTGATAACAGCCTTCCCTATGAAGGGACTTCCTCTGGAGTCTCTGGGGCAGTACCTCATACTCCTCAGTaGGCAGGATCTGGCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDNSLPYEGTSSGVSGAVPHTPQ*AGSGFA Trigger: AGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGG...TACTGCCCCAGAGACTCCAGAGGAAGTCCCTTCATAGGGAAGGCTGTTATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCTGGAGCCATGTGTGGTaGCTGTTCCTCACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTWSHVW*LFLTSS Trigger: TGAGCTGGTGAGGAACAGCCACCACACATGGCTCCA...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR CCA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGACGGTACAGATTCATTaGCTACCAGCTTGGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLTVQIH*LPAWYG Trigger: CCCATACCAAGCTGGTAGCCAATGAATCTGTACCGT...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAAGGCACGGGAACAGATaGCCCGCGGCTTGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKRHGNR*PAACTV Trigger: CACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCT...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCTGCTCTCGTCTCCGTTaGTGTAGTGCACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTCSRLR*CSARRA Trigger: TGCTCTTCGTGCACTACAGCAACGGAGACGAGAGCA...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | ACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGTGCTCTCGTCTCCGTTaGTGTAGTGCACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRSQCSSVIAMKEARKECSRLR*CSARRA Trigger: TGCTCTTCGTGCACTACAGCAACGGAGACGAGAGCA...CTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | GTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCTGCTCTCGTCTCCGTTaGTGTAGTGCACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQFSDSHEGSQKGGTCACCSRLR*CSARRA Trigger: TGCTCTTCGTGCACTACAGCAACGGAGACGAGAGCA...GCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | TGGTACTCGGGACTTAACTCCATCATCACTTTTAGACATGGCAGCAAGAAGGTATCCAGCTGGCTGACCTaGATGGCGCTCATCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WYSGLNSIITFRHGSKKVSSWLT*MALIAS Trigger: GGAGGCGATGAGCGCCATGCAGGTCAGCCAGCTGGA...TACCTTCTTGCTGCCATGTCTAAAAGTGATGATGGAGTTAAGTCCCGAGTACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS-3UTR GCA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGCAGCTCATTGGATTCTaGCTTATGGCTCCTCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLQLIGF*LMAPHV Trigger: TACATGAGGAGCCATAAGGCAGAATCCAATGAGCTG...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAAGACTGCAGTTCCTTaGTGGGGCTTGACACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTKTAVP*WGLTRR Trigger: CCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTT...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | TGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGTTCATCTGTGCCAGGTaGATGATGAGCCGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSVIAMKEARKEVHVPAFICAR*MMSRHS Trigger: GGAGTGTCGGCTCATCATCCACCTGGCACAGATGAA...CGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | GTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCTTCATCTGTGCCAGGTaGATGATGAGCCGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQFSDSHEGSQKGGTCACFICAR*MMSRHS Trigger: GGAGTGTCGGCTCATCATCCACCTGGCACAGATGAA...GCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCTCAGTGGGCAGGATCTaGCTTCGCTGTAACCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTSVGRI*LRCNPF Trigger: GAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGA...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGATCAGTGGGCAGGATCTaGCTTCGCTGTAACCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTPRSQCSSVIAMKEARSVGRI*LRCNPF Trigger: GAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGA...TCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS-3UTR CCA 90 bp | ACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGTCAGTGGGCAGGATCTaGCTTCGCTGTAACCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPRSQCSSVIAMKEARKESVGRI*LRCNPF Trigger: GAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGA...CTCCTTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS-3UTR TCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGCGTCAGGGTCTGCTTTaGTTGCAGAGTACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGRERQGLL*LQSTSP Trigger: AGGAGATGTACTCTGCAATCAAAGCAGACCCTGACG...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAATGGCACGCATGACGTaGTGTGCTCCCTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKMARMT*CAPSPW Trigger: CCAGGGAGAGGGAGCACATCACGTCATGCGTGCCAT...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR GCA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGAGGGTCTGCTTTGATTaGAGAGTACATCTCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLRVCFD*RVHLLN Trigger: ATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCT...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | ACGGAGCAGCATGGAGGCTGTACACCAATAAATAACGTGAATGTAGGAACTGCGTGGTATGGGAGCAGATaGTCTCTGGGTACACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEQHGGCTPINNVNVGTAWYGSR*SLGTRV Trigger: GACCCGTGTACCCAGAGACCATCTGCTCCCATACCA...CGCAGTTCCTACATTCACGTTATTTATTGGTGTACAGCCTCCATGCTGCTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR TCA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGTCTCACCCCCACCGGTaGCATTGTTCAAATAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: INNVNVGTAPLIAAAGRESHPHR*HCSNKT Trigger: TGTTTTATTTGAACAATGTCACCGGTGGGGGTGAGA...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAATTGCCCTTGTCACAGTaGCTTCGAGTGTCCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKLPLSQ*LRVSRR Trigger: TCTCCGGGACACTCGAAGGCACTGTGACAAGGGCAA...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAACTGCAGTTCCTTGCTaGGGCTTGACACGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKTAVPC*GLTRRL Trigger: CAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGT...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAACATTGGCTACCAGCTTaGTATGGGAGCAGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKHWLPA*YGSRWS Trigger: AGACCATCTGCTCCCATACCAAGCTGGTAGCCAATG...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAGCAGAGTACATCTCCTaGATGTTCTCTGGAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKAEYIS*MFSGVI Trigger: GATGACTCCAGAGAACATTCAGGAGATGTACTCTGC...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAATCACCGTCAGGGTCTaGTTTGATTGCAGAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKITVRV*FDCRVH Trigger: ATGTACTCTGCAATCAAAGCAGACCCTGACGGTGAT...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAATTGGATTCTGCCTTATaGCTCCTCATGTACTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKLDSAL*LLMYLW Trigger: CCACAAGTACATGAGGAGCCATAAGGCAGAATCCAA...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CACCAAGAAGTAGGCACGGGAACAGATGCCCCGCGGCTTGCACAGTaGCCGCACCGGGGCGTCTTCACTATCGCCTGGTCTGGTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HQEVGTGTDAPRLAQ*PHRGVFTIAWSGRC Trigger: GCAGCGACCAGACCAGGCGATAGTGAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCTACTTCTTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS TCA 90 bp | AGGCGAGTGAGGCGCAGGACCCTCTGGCGGATGGCACGCATGACGTaGTGTGCTCCCTCTCCCTGGTGGAGCCATGTGTGGTGGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRRRTLWRMARMT*CAPSPWWSHVWWLF Trigger: GAACAGCCACCACACATGGCTCCACCAGGGAGAGGGAGCACATCACGTCATGCGTGCCATCCGCCAGAGGGTCCTGCGCCTCACTCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | CCATCAGCACCAAGAAGTAGGCACGGGAACAGATGCCCCGCGGCTTaGACAGTGGCCGCACCGGGGCGTCTTCACTATCGCCTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSAPRSRHGNRCPAA*TVAAPGRLHYRLVW Trigger: CCAGACCAGGCGATAGTGAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCTACTTCTTGGTGCTGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS TCA 90 bp | CACACGGGCATCACTGTAGGCTCGGTCCAAGGCCCACTCGGGTTGTaGGTCCATGCCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTGITVGSVQGPLGL*VHATFPSQTSHLLL Trigger: CAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCATGGACTCACAACCCGAGTGGGCCTTGGACCGAGCCTACAGTGATGCCCGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | AGTGAGGCGCAGGACCCTCTGGCGGATGGCACGCATGACGTGATGTaGTCCCTCTCCCTGGTGGAGCCATGTGTGGTGGCTGTTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEAQDPLADGTHDVM*SLSLVEPCVVAVPH Trigger: GTGAGGAACAGCCACCACACATGGCTCCACCAGGGAGAGGGAGCACATCACGTCATGCGTGCCATCCGCCAGAGGGTCCTGCGCCTCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | GGTGCACGAACACCATCAGCACCAAGAAGTAGGCACGGGAACAGATaGCCCGCGGCTTGCACAGTGGCCGCACCGGGGCGTCTTCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: GARTPSAPRSRHGNR*PAACTVAAPGRLHY Trigger: ATAGTGAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCTACTTCTTGGTGCTGATGGTGTTCGTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS GCA 90 bp | GGTTGTGAGTCCATGCCACCTTCCCGAGCCAGACGAGCCATCTCCTaGTGGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GCESMPPSRARRAIS*WNKACRARLGSTLI Trigger: GATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCATGGACTCACAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | CATCACTGTAGGCTCGGTCCAAGGCCCACTCGGGTTGTGAGTCCATaGCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTGGAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHCRLGPRPTRVVSP*HLPEPDEPSPAGTR Trigger: CCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCATGGACTCACAACCCGAGTGGGCCTTGGACCGAGCCTACAGTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | TGTGAGTCCATGCCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTaGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACATTGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CESMPPSRARRAISC*NKACRARLGSTLIQ Trigger: CTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCATGGACTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCAGCAGGGCCAGCACGTaGCCCAAGTACAGGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RARARGRPELQSAVGQRTSRAST*PKYRCT Trigger: CGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGCT...GGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | CCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTGGAACAAGGCTTaGCGTGCCCGGCTAGGGTCCACATTGATCCAGTTGTTAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: PPSRARRAISCWNKA*RARLGSTLIQLLAI Trigger: GATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCTAGGGCAAGAGGTCGGCCAGAACTTCAGTCTGCAGTAGGACAGAGGACCGCGGCCACTGAAGATTaGAGGCCTCCTCGACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RARARGRPELQSAVGQRTAATED*RPPRLS Trigger: AGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCGC...GGTCCTCTGTCCTACTGCAGACTGAAGTTCTGGCCGACCTCTTGCCCTAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | CGTCTCCGTTGCTGTAGTGCACGAAGAGCAGCAGGGCCAGCACGTTaGCCAAGTACAGGTGCACGAACACCATCAGCACCAAGAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRCCSARRAAGPAR*PSTGARTPSAPRSR Trigger: CCTACTTCTTGGTGCTGATGGTGTTCGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGCTGCTCTTCGTGCACTACAGCAACGGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACCGCTCATATCCCACCTaGATGCCCTCCAGCCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLAGSPVVLFNGAAWRLYRSYPT*MPSSRV Trigger: CACCCGGCTGGAGGGCATCAAGGTGGGATATGAGCG...GTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | CTGTCAGAGGAGAAAGTAGGATGGACCCCAGGCTGGGGGCATGTCCAAGCAAGCTCAAAAAGCAGCGGCTaGAGGCTGAGGGTTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSEEKVGWTPGWGHVQASSKSSG*RLRVRM Trigger: CATCCGAACCCTCAGCCTCAAGCCGCTGCTTTTTGA...GCTTGCTTGGACATGCCCCCAGCCTGGGGTCCATCCTACTTTCTCCTCTGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR CAA 90 bp | CGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGTGGCTCCTCATGTACTaGTGGAAGTCTCGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPLAGSPVVLFNGAAWRWLLMY*WKSRRS Trigger: GGACCTCCGAGACTTCCACAAGTACATGAGGAGCCA...CCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | GTGGGCAGGATCTGGCTTCGCTGTAACCCTTTCATCTGTGCCAGGTaGATGATGAGCCGACACTCCTCGTCACTCAGGAAGCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VGRIWLRCNPFICAR*MMSRHSSSLRKPGI Trigger: AATCCCAGGCTTCCTGAGTGACGAGGAGTGTCGGCTCATCATCCACCTGGCACAGATGAAAGGGTTACAGCGAAGCCAGATCCTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CCA 90 bp | TGCATGGCGCTCATCGCCTCCTCATACTCCTCAGTGGGCAGGATCTaGCTTCGCTGTAACCCTTTCATCTGTGCCAGGTGGATGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CMALIASSYSSVGRI*LRCNPFICARWMMS Trigger: GCTCATCATCCACCTGGCACAGATGAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGGAGGCGATGAGCGCCATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS-3UTR CAA 90 bp | CGCCGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGAAAGACTGCAGTTCCTaGCTGGGGCTTGACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRPLAGSPVVLFNGAAWRKDCSS*LGLDTK Trigger: CTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTT...CCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | AGCGACAGGAGGTCTCAAACGGTACAGATTCATTGGCTACCAGCTTaGTATGGGAGCAGATGGTCTCTGGGTACACGGGTCCGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SDRRSQTVQIHWLPA*YGSRWSLGTRVRCP Trigger: TGGACAGCGGACCCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTGAGACCTCCTGTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | AGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGAAAAGCAGGGCCAGCACGTaGCCCAAGTACAGGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RNAEISVQFSDSHEGSQKSRAST*PKYRCT Trigger: CGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGCT...TTTCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
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| CDS TCA 90 bp | CAGGAAGGTAGTTGTACCAAAAGACTGCAGTTCCTTGCTGGGGCTTaGCACGAAGGTTGCCCTTGTCACAGTGCCTTCGAGTGTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEGSCTKRLQFLAGA*HEGCPCHSAFECPG Trigger: TCCGGGACACTCGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAACTACCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CCA 90 bp | GTCAGGGTCTGCTTTGATTGCAGAGTACATCTCCTGAATGTTCTCTaGAGTCATCCACCGTCCATTTCCCAGGCGAGTCTGGGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRVCFDCRVHLLNVL*SHPPSISQASLGQD Trigger: GTCCTGGCCCAGACTCGCCTGGGAAATGGACGGTGGATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CTCCCTGGTGGAGCCATGTGTGGTGGCTGTTCCTCACCAGCTCATTaGATTCTGCCTTATGGCTCCTCATGTACTTGTGGAAGTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGGAMCGGCSSPAH*ILPYGSSCTCGSLG Trigger: TCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAACAGCCACCACACATGGCTCCACCAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CAAACGGTACAGATTCATTGGCTACCAGCTTGGTATGGGAGCAGATaGTCTCTGGGTACACGGGTCCGCTGTCCACATGGGCATGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTVQIHWLPAWYGSR*SLGTRVRCPHGHGS Trigger: ACTACCATGCCCATGTGGACAGCGGACCCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGATAGCCATGAAGGAAGCCAGAAAGGAGGTACATGTGCCTGCGGGCTAGCGGCCACTGAAGATTaGAGGCCTCCTCGACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSDSHEGSQKGGTCACGLAATED*RPPRLS Trigger: AGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCGC...TAGCCCGCAGGCACATGTACCTCCTTTCTGGCTTCCTTCATGGCTATCACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193621.2 |
||
| CDS-3UTR CAA 90 bp | CGGCCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTTCCTCACCAGCTCATaGGATTCTGCCTTATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLAGSPVVLFNGAAWRLFLTSS*DSALWL Trigger: GAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAA...CAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 90 bp | ACGCCATCACCGTCAGGGTCTGCTTTGATTGCAGAGTACATCTCCTaGATGTTCTCTGGAGTCATCCACCGTCCATTTCCCAGGCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSPSGSALIAEYIS*MFSGVIHRPFPRRV Trigger: GACTCGCCTGGGAAATGGACGGTGGATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGGTGATGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 90 bp | AGGTCCTGTTGTCTGCCACAGGGAAGACGGTCTCACCCCCACCGGTaGCATTGTTCAAATAAAACAGCACTGTCATGTAGCGACAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSCCLPQGRRSHPHR*HCSNKTALSCSDRR Trigger: CCTCCTGTCGCTACATGACAGTGCTGTTTTATTTGAACAATGTCACCGGTGGGGGTGAGACCGTCTTCCCTGTGGCAGACAACAGGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | TTCCTGCAGACTCAGCACGCCATCACCGTCAGGGTCTGCTTTGATTaGAGAGTACATCTCCTGAATGTTCTCTGGAGTCATCCACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLQTQHAITVRVCFD*RVHLLNVLWSHPPS Trigger: GGACGGTGGATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | GTGGAGCCATGTGTGGTGGCTGTTCCTCACCAGCTCATTGGATTCTaGCTTATGGCTCCTCATGTACTTGTGGAAGTCTCGGAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VEPCVVAVPHQLIGF*LMAPHVLVEVSEVH Trigger: ATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAACAGCCACCACACATGGCTCCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CCTTATGGCTCCTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTTaGAAAATTCCTGCAGACTCAGCACGCCATCACCGTCAGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYGSSCTCGSLGGPC*KIPADSARHHRQGL Trigger: CAGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | GCACTGTCATGTAGCGACAGGAGGTCTCAAACGGTACAGATTCATTaGCTACCAGCTTGGTATGGGAGCAGATGGTCTCTGGGTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSCSDRRSQTVQIH*LPAWYGSRWSLGTR Trigger: CCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTGAGACCTCCTGTCGCTACATGACAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCTCAAAAAGCAGCGGCTaGAGGCTGAGGGTTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LAGSPVVLFNGAAWRLYTSKSSG*RLRVRM Trigger: CATCCGAACCCTCAGCCTCAAGCCGCTGCTTTTTGA...GGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGAACGCCGAGATCTCAGTGCAGTTCAGTGATAGCCATGAAGGAAGCCAGATCAAAAAGCAGCGGCTaGAGGCTGAGGGTTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGTPRSQCSSVIAMKEARSKSSG*RLRVRM Trigger: CATCCGAACCCTCAGCCTCAAGCCGCTGCTTTTTGA...TCTGGCTTCCTTCATGGCTATCACTGAACTGCACTGAGATCTCGGCGTTCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS-3UTR CAA 90 bp | CCAATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGGCTTGACACGAAGGTaGCCCTTGTCACAGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PINNVNVGTAPLIAAAGRGLTRR*PLSQCL Trigger: AAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCC...CCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | ATAAATAACGTGAATGTAGGAACTGCGCCTTTGATCGCGGCTGCAGGCAGGGAGCGGCTAGGGTCCACATaGATCCAGTTGTTAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: INNVNVGTAPLIAAAGRERLGST*IQLLAI Trigger: GATCGCTAACAACTGGATCAATGTGGACCCTAGCCG...CTCCCTGCCTGCAGCCGCGATCAAAGGCGCAGTTCCTACATTCACGTTATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 90 bp | CTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTTGGAAAATTCCTaGAGACTCAGCACGCCATCACCGTCAGGGTCTGCTTTGATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LMYLWKSRRSMLENS*RLSTPSPSGSALIA Trigger: TGCAATCAAAGCAGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CATGTGTGGTGGCTGTTCCTCACCAGCTCATTGGATTCTGCCTTATaGCTCCTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HVWWLFLTSSLDSAL*LLMYLWKSRRSMLE Trigger: TTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAACAGCCACCACACATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGCTGGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACAACGGTACAGATTCATaGGCTACCAGCTTGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PLAGSPVVLFNGAAWRLYNGTDS*ATSLVW Trigger: CCATACCAAGCTGGTAGCCAATGAATCTGTACCGTT...GTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCCAGCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 90 bp | AAAATTCCTGCAGACTCAGCACGCCATCACCGTCAGGGTCTGCTTTaGTTGCAGAGTACATCTCCTGAATGTTCTCTGGAGTCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KIPADSARHHRQGLL*LQSTSPECSLESST Trigger: GGTGGATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 90 bp | CTCACCAGCTCATTGGATTCTGCCTTATGGCTCCTCATGTACTTGTaGAAGTCTCGGAGGTCCATGTTGGAAAATTCCTGCAGACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLDSALWLLMYL*KSRRSMLENSCRLS Trigger: GCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAAACACGAAGGTTGCCCTaGTCACAGTGCCTTCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKTRRLP*SQCLRV Trigger: CACTCGAAGGCACTGTGACAAGGGCAACCTTCGTGT...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | ACGGAGCAGCATGGAGGCTGTACACCAATAAATAACGTGAATGTAGGAACTGCGTCCACATTGATCCAGTaGTTAGCGATCCACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TEQHGGCTPINNVNVGTASTLIQ*LAIHLV Trigger: CACCAAGTGGATCGCTAACAACTGGATCAATGTGGA...CGCAGTTCCTACATTCACGTTATTTATTGGTGTACAGCCTCCATGCTGCTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCCTGTAGTTTTATTTAACGGAGCAGCATGGAGGCTGTACACCAATAAATCTCGGAGGTCCATGTaGGAAAATTCCTGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPVVLFNGAAWRLYTNKSRRSM*ENSCRL Trigger: GAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGA...TTTATTGGTGTACAGCCTCCATGCTGCTCCGTTAAATAAAACTACAGGGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | CTTGATGCCCTCCAGCCGGGTGAGGGGACCCAAGGTTaGCACTGGCTGGGGGCTCTGCTCGCGGCGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LDALQPGEGTQG*HWLGALLAALG Trigger: CCCCAGCGCCGCGAGCAGAGCCCCCAGCCAGTGCCAACCTTGGGTCCCCTCACCCGGCTGGAGGGCATCAAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CCA 72 bp | AAGGTTGGCACTGGCTGGGGGCTCTGCTCGCGGCGCTaGGGTCCGGGGTCTGTGCTCTCGTCTCCGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KVGTGWGLCSRR*GPGSVLSSPLL Trigger: CAGCAACGGAGACGAGAGCACAGACCCCGGACCCCAGCGCCGCGAGCAGAGCCCCCAGCCAGTGCCAACCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CAA 90 bp | CTGCCCCGGAAGGGCGATGCTCCGGTGGTAGCGGCCACTGAAGATTaGAGGCCTCCTCGACTGTCTCAGCCTCAGGCCGCTGCACGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LPRKGDAPVVAATED*RPPRLSQPQAAARS Trigger: CGACCGTGCAGCGGCCTGAGGCTGAGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCGCTACCACCGGAGCATCGCCCTTCCGGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS GCA 72 bp | GGCGCTGGGGTCCGGGGTCTGTGCTCTCGTCTCCGTTaGTGTAGTGCACGAAGAGCAGCAGGGCCAGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GAGVRGLCSRLR*CSARRAAGPAR Trigger: ACGTGCTGGCCCTGCTGCTCTTCGTGCACTACAGCAACGGAGACGAGAGCACAGACCCCGGACCCCAGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS CCA 72 bp | GTAGGCACGGGAACAGATGCCCCGCGGCTTGCACAGTaGCCGCACCGGGGCGTCTTCACTATCGCCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VGTGTDAPRLAQ*PHRGVFTIAWS Trigger: AGACCAGGCGATAGTGAAGACGCCCCGGTGCGGCCACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS GCA 72 bp | ACACCATCAGCACCAAGAAGTAGGCACGGGAACAGATaGCCCGCGGCTTGCACAGTGGCCGCACCGGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TPSAPRSRHGNR*PAACTVAAPGR Trigger: ACGCCCCGGTGCGGCCACTGTGCAAGCCGCGGGGCATCTGTTCCCGTGCCTACTTCTTGGTGCTGATGGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS CCA 72 bp | TCTGGAGTCATCCACCGTCCATTTCCCAGGCGAGTCTaGGCCAGGACCTCTCGGAGCTGCAGGCGACCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGVIHRPFPRRV*ARTSRSCRRPS Trigger: CGACGGTCGCCTGCAGCTCCGAGAGGTCCTGGCCCAGACTCGCCTGGGAAATGGACGGTGGATGACTCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 72 bp | AGGCTCGGTCCAAGGCCCACTCGGGTTGTGAGTCCATaGCACCTTCCCGAGCCAGACGAGCCATCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLGPRPTRVVSP*HLPEPDEPSPA Trigger: AGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCATGGACTCACAACCCGAGTGGGCCTTGGACCGAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | ATGCCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTaGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: MPPSRARRAISC*NKACRARLGST Trigger: TGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 72 bp | CCCGCGACCACCTGGACTTTCCGCTCATATCCCACCTaGATGCCCTCCAGCCGGGTGAGGGGACCCAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PATTWTFRSYPT*MPSSRVRGPKV Trigger: AACCTTGGGTCCCCTCACCCGGCTGGAGGGCATCAAGGTGGGATATGAGCGGAAAGTCCAGGTGGTCGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
||
| CDS CAA 90 bp | TGGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACATTGATCCAGTaGTTAGCGATCCACTTGGTGCCGCGGGTGACCAGGCAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WNKACRARLGSTLIQ*LAIHLVPRVTRQPP Trigger: TGGGGGCTGCCTGGTCACCCGCGGCACCAAGTGGATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 72 bp | AGGACCTCTCGGAGCTGCAGGCGACCGTCGTGGTTCTaGTCCAACAGCTGGAAGAGGTCCAGCTGGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RTSRSCRRPSWF*SNSWKRSSWLT Trigger: GGTCAGCCAGCTGGACCTCTTCCAGCTGTTGGATCAGAACCACGACGGTCGCCTGCAGCTCCGAGAGGTCCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 72 bp | ACCTGCTCTCGGAGCTGCAGGCGACCGTCGTGGTTCTaGTCCAACAGCTGGAAGAGGTCCAGCTGGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: TCSRSCRRPSWF*SNSWKRSSWLT Trigger: GGTCAGCCAGCTGGACCTCTTCCAGCTGTTGGATCAGAACCACGACGGTCGCCTGCAGCTCCGAGAGCAGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192080.6 |
||
| CDS CAA 72 bp | AAGGGCGATGCTCCGGTGGTAGCGGCCACTGAAGATTaGAGGCCTCCTCGACTGTCTCAGCCTCAGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGDAPVVAATED*RPPRLSQPQAA Trigger: AGCGGCCTGAGGCTGAGACAGTCGAGGAGGCCTCAAATCTTCAGTGGCCGCTACCACCGGAGCATCGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
||
| CDS CAA 72 bp | GCTTGCCGTGCCCGGCTAGGGTCCACATTGATCCAGTaGTTAGCGATCCACTTGGTGCCGCGGGTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ACRARLGSTLIQ*LAIHLVPRVTR Trigger: CCTGGTCACCCGCGGCACCAAGTGGATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 72 bp | CGAGCCAGACGAGCCATCTCCTGCTGGAACAAGGCTTaGCGTGCCCGGCTAGGGTCCACATTGATCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RARRAISCWNKA*RARLGSTLIQL Trigger: CAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 72 bp | CCGAGCCAGACGAGCCATCTCCTGCTGGAACAAGGCTaGCCGTGCCCGGCTAGGGTCCACATTGATCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSQTSHLLLEQG*PCPARVHIDPV Trigger: AACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 90 bp | ATCTCCTGCTGGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACATaGATCCAGTTGTTAGCGATCCACTTGGTGCCGCGGGTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISCWNKACRARLGST*IQLLAIHLVPRVTR Trigger: CCTGGTCACCCGCGGCACCAAGTGGATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 90 bp | GCCACCTTCCCGAGCCAGACGAGCCATCTCCTGCTGGAACAAGGCTaGCCGTGCCCGGCTAGGGTCCACATTGATCCAGTTGTTAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ATFPSQTSHLLLEQG*PCPARVHIDPVVSD Trigger: ATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCAGCAGGAGATGGCTCGTCTGGCTCGGGAAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 72 bp | CTAGGGTCCACATTGATCCAGTTGTTAGCGATCCACTaGGTGCCGCGGGTGACCAGGCAGCCCCCATGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTLIQLLAIH*VPRVTRQPPCN Trigger: GTTGCATGGGGGCTGCCTGGTCACCCGCGGCACCAAGTGGATCGCTAACAACTGGATCAATGTGGACCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 72 bp | TGGAACAAGGCTTGCCGTGCCCGGCTAGGGTCCACATaGATCCAGTTGTTAGCGATCCACTTGGTGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: WNKACRARLGST*IQLLAIHLVPR Trigger: CCGCGGCACCAAGTGGATCGCTAACAACTGGATCAATGTGGACCCTAGCCGGGCACGGCAAGCCTTGTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS GCA 72 bp | TGCTGTAGTGCACGAAGAGCAGCAGGGCCAGCACGTTaGCCAAGTACAGGTGCACGAACACCATCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CCSARRAAGPAR*PSTGARTPSAP Trigger: TGGTGCTGATGGTGTTCGTGCACCTGTACTTGGGCAACGTGCTGGCCCTGCTGCTCTTCGTGCACTACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006853.11 ENSMUST00000193621.2 |
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| CDS CAA 72 bp | GCAGTTCCTTGCTGGGGCTTGACACGAAGGTTGCCCTaGTCACAGTGCCTTCGAGTGTCCCGGAGATCGACA | + |
|
Preference number: 6 (lower is better) Translates to: AVPCWGLTRRLP*SQCLRVSRRST Trigger: TGTCGATCTCCGGGACACTCGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CCA 72 bp | CTCATCGCCTCCTCATACTCCTCAGTGGGCAGGATCTaGCTTCGCTGTAACCCTTTCATCTGTGCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIASSYSSVGRI*LRCNPFICARW Trigger: CCACCTGGCACAGATGAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGGAGGCGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CCA 72 bp | CCTGCATGGCGCTCATCGCCTCCTCATACTCCTCAGTaGGCAGGATCTGGCTTCGCTGTAACCCTTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PAWRSSPPHTPQ*AGSGFAVTLSS Trigger: AGATGAAAGGGTTACAGCGAAGCCAGATCCTGCCCACTGAGGAGTATGAGGAGGCGATGAGCGCCATGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CCA 72 bp | CAGATTCATTGGCTACCAGCTTGGTATGGGAGCAGATaGTCTCTGGGTACACGGGTCCGCTGTCCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIHWLPAWYGSR*SLGTRVRCPHG Trigger: CCCATGTGGACAGCGGACCCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 72 bp | AAGACTGCAGTTCCTTGCTGGGGCTTGACACGAAGGTaGCCCTTGTCACAGTGCCTTCGAGTGTCCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KTAVPCWGLTRR*PLSQCLRVSRR Trigger: TCTCCGGGACACTCGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 90 bp | GCCTTGCCCATCAGGAAGGTAGTTGTACCAAAAGACTGCAGTTCCTaGCTGGGGCTTGACACGAAGGTTGCCCTTGTCACAGTGCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALPIRKVVVPKDCSS*LGLDTKVALVTVPS Trigger: CGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAACTACCTTCCTGATGGGCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS GCA 72 bp | TTGTGGAAGTCTCGGAGGTCCATGTTGGAAAATTCCTaGAGACTCAGCACGCCATCACCGTCAGGGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWKSRRSMLENS*RLSTPSPSGSA Trigger: AGCAGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS GCA 72 bp | CTGAATCAGACTCATTTCATCATAGGTCCTGTTGTCTaGCACAGGGAAGACGGTCTCACCCCCACCGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LNQTHFIIGPVV*HREDGLTPTGD Trigger: GTCACCGGTGGGGGTGAGACCGTCTTCCCTGTGGCAGACAACAGGACCTATGATGAAATGAGTCTGATTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CCA 72 bp | ATCTGGCTTCGCTGTAACCCTTTCATCTGTGCCAGGTaGATGATGAGCCGACACTCCTCGTCACTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IWLRCNPFICAR*MMSRHSSSLRK Trigger: CTTCCTGAGTGACGAGGAGTGTCGGCTCATCATCCACCTGGCACAGATGAAAGGGTTACAGCGAAGCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006853.11 ENSMUST00000192080.6 ENSMUST00000193621.2 |
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| CDS CAA 90 bp | GCCTTATGGCTCCTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTaGGAAAATTCCTGCAGACTCAGCACGCCATCACCGTCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALWLLMYLWKSRRSM*ENSCRLSTPSPSGS Trigger: AGACCCTGACGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 90 bp | TTGTACCAAAAGACTGCAGTTCCTTGCTGGGGCTTGACACGAAGGTaGCCCTTGTCACAGTGCCTTCGAGTGTCCCGGAGATCGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LYQKTAVPCWGLTRR*PLSQCLRVSRRSTS Trigger: TGATGTCGATCTCCGGGACACTCGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS TCA 72 bp | GCAGACTCAGCACGCCATCACCGTCAGGGTCTGCTTTaGTTGCAGAGTACATCTCCTGAATGTTCTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ADSARHHRQGLL*LQSTSPECSLE Trigger: CTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGGTGATGGCGTGCTGAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 72 bp | AGTTGTACCAAAAGACTGCAGTTCCTTGCTGGGGCTTaGCACGAAGGTTGCCCTTGTCACAGTGCCTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCTKRLQFLAGA*HEGCPCHSAFE Trigger: CTCGAAGGCACTGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | GGAGCCATGTGTGGTGGCTGTTCCTCACCAGCTCATTaGATTCTGCCTTATGGCTCCTCATGTACTTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAMCGGCSSPAH*ILPYGSSCTCG Trigger: TCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAACAGCCACCACACATGGCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | AGGTCTCAAACGGTACAGATTCATTGGCTACCAGCTTaGTATGGGAGCAGATGGTCTCTGGGTACACGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSQTVQIHWLPA*YGSRWSLGTRV Trigger: GACCCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 72 bp | CTCCTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTaGGAAAATTCCTGCAGACTCAGCACGCCATCACCG | + |
|
Preference number: 6 (lower is better) Translates to: LLMYLWKSRRSM*ENSCRLSTPSP Trigger: CGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CAA 72 bp | GAGGTCTCAAACGGTACAGATTCATTGGCTACCAGCTaGGTATGGGAGCAGATGGTCTCTGGGTACACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: EVSNGTDSLATS*VWEQMVSGYTG Trigger: ACCCGTGTACCCAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTGAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 72 bp | CCGTCAGGGTCTGCTTTGATTGCAGAGTACATCTCCTaGATGTTCTCTGGAGTCATCCACCGTCCATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSGSALIAEYIS*MFSGVIHRPFP Trigger: GGGAAATGGACGGTGGATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS TCA 72 bp | TGTCTGCCACAGGGAAGACGGTCTCACCCCCACCGGTaGCATTGTTCAAATAAAACAGCACTGTCATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLPQGRRSHPHR*HCSNKTALSCS Trigger: GCTACATGACAGTGCTGTTTTATTTGAACAATGTCACCGGTGGGGGTGAGACCGTCTTCCCTGTGGCAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 72 bp | TGTGTGGTGGCTGTTCCTCACCAGCTCATTGGATTCTaGCTTATGGCTCCTCATGTACTTGTGGAAGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CVVAVPHQLIGF*LMAPHVLVEVS Trigger: CGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAACAGCCACCACACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | TCCTCATGTACTTGTGGAAGTCTCGGAGGTCCATGTTaGAAAATTCCTGCAGACTCAGCACGCCATCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCTCGSLGGPC*KIPADSARHHR Trigger: ACGGTGATGGCGTGCTGAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS CCA 72 bp | TGTAGCGACAGGAGGTCTCAAACGGTACAGATTCATTaGCTACCAGCTTGGTATGGGAGCAGATGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSDRRSQTVQIH*LPAWYGSRWSL Trigger: CAGAGACCATCTGCTCCCATACCAAGCTGGTAGCCAATGAATCTGTACCGTTTGAGACCTCCTGTCGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
||
| CDS GCA 72 bp | ACTCAGCACGCCATCACCGTCAGGGTCTGCTTTGATTaGAGAGTACATCTCCTGAATGTTCTCTGGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TQHAITVRVCFD*RVHLLNVLWSH Trigger: ATGACTCCAGAGAACATTCAGGAGATGTACTCTGCAATCAAAGCAGACCCTGACGGTGATGGCGTGCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 72 bp | ATCAGGAAGGTAGTTGTACCAAAAGACTGCAGTTCCTaGCTGGGGCTTGACACGAAGGTTGCCCTTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: IRKVVVPKDCSS*LGLDTKVALVT Trigger: TGTGACAAGGGCAACCTTCGTGTCAAGCCCCAGCAAGGAACTGCAGTCTTTTGGTACAACTACCTTCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 90 bp | TTCCTCACCAGCTCATTGGATTCTGCCTTATGGCTCCTCATGTACTaGTGGAAGTCTCGGAGGTCCATGTTGGAAAATTCCTGCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: FLTSSLDSALWLLMY*WKSRRSMLENSCRL Trigger: GAGTCTGCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCTGGTGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CCA 72 bp | TCATTGGATTCTGCCTTATGGCTCCTCATGTACTTGTaGAAGTCTCGGAGGTCCATGTTGGAAAATTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLDSALWLLMYL*KSRRSMLENSC Trigger: GCAGGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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| CDS CAA 72 bp | AGCTCATTGGATTCTGCCTTATGGCTCCTCATGTACTaGTGGAAGTCTCGGAGGTCCATGTTGGAAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLDSALWLLMY*WKSRRSMLENS Trigger: GGAATTTTCCAACATGGACCTCCGAGACTTCCACAAGTACATGAGGAGCCATAAGGCAGAATCCAATGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006853.11 |
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