Pregenerated sensors for P4HB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025130Ensembl transcript IDs: ENSMUST00000026122.11, ENSMUST00000168360.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGGCTTCAGAAAGATTCCCTGGGTTCTGATGGCGCTCCCTCCTaGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: VWLQKDSLGSDGAPS*GEAQAPEMWAAGSV Trigger: CACGCTCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCAGGGAATCTTTCTGAAGCCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR CCA 90 bp | CTGGTCGGTAGTCCTGGCTTGAGGAGAGTGAGAGCTGTCCAGACCTaGCCTGAGCCTGGCAGCAAGCCACACTGTCTCTTTTCCACACAC | + |
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Preference number: 1 (lower is better) Translates to: LVGSPGLRRVRAVQT*PEPGSKPHCLFSTH Trigger: GTGTGTGGAAAAGAGACAGTGTGGCTTGCTGCCAGGCTCAGGCCAGGTCTGGACAGCTCTCACTCTCCTCAAGCCAGGACTACCGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 90 bp | CTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCCCTaGGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGG | + |
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Preference number: 1 (lower is better) Translates to: LSVRVSDECGFRKIP*VLMALPPGVRLRLR Trigger: CCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR GCA 90 bp | GTGTCCTTGGCTGACTCCCAATCTGGGAATCAAGGGTCCCAGTTCTaGCTCACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VSLADSQSGNQGSQF*LTQATGHAGKESSS Trigger: GCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGGGACCCTTGATTCCCAGATTGGGAGTCAGCCAAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR TCA 90 bp | CTACAAAGCCATGCTACCATGGCAACACTAGGACAAGGTGGAGAGTaGCCACAGACCCAGAGCCACACTTCCTACCCAGGGCAGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LQSHATMATLGQGGE*PQTQSHTSYPGQEE Trigger: TTCTTCCTGCCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATGGTAGCATGGCTTTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 90 bp | ATGCAAACTACAAAGCCATGCTACCATGGCAACACTAGGACAAGGTaGAGAGTGACCACAGACCCAGAGCCACACTTCCTACCCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: MQTTKPCYHGNTRTR*RVTTDPEPHFLPRA Trigger: TGCCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATGGTAGCATGGCTTTGTAGTTTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR TCA 90 bp | TTGAAAAGCAAAAGAAGAGACAGGTCTAAGTGTACGTGTGTCAGATaGGTGTGGCTTCAGAAAGATTCCCTGGGTTCTGATGGCGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LKSKRRDRSKCTCVR*VWLQKDSLGSDGAP Trigger: GGGAGCGCCATCAGAACCCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGTCTCTTCTTTTGCTTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGGACGATGGCGCTCCCTCCTaGGGTGAGGCTCAGGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: KDITSVRRSPNILASTWDDGAPS*GEAQAP Trigger: CGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATC...GTCCCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CAA 90 bp | GTAGAAATGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTaGGCTGACTCCCAATCTGGGAATCAAGGGTCCCAGTTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VEMPEEWAFHSAPVS*ADSQSGNQGSQFCL Trigger: GAGGCAGAACTGGGACCCTTGATTCCCAGATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCATTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGCCATGCTACCATGGCAACACTAGGACAAGGTGGAGAGTGACCACAGACCAAGAGGGGCTGACCTaGACAGAGATCCCTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TKPCYHGNTRTRWRVTTDQEGLT*TEIPFQ Trigger: TTGGAAAGGGATCTCTGTCCAGGTCAGCCCCTCTTG...GTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATGGTAGCATGGCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR-3UTR CCA 90 bp | ATTATGGTAGAAATGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGTTCAGAAAGATTCCCTaGGTTCTGATGGCGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IMVEMPEEWAFHSAPVSLFRKIP*VLMALP Trigger: AGGGAGCGCCATCAGAACCCAGGGAATCTTTCTGAA...CAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCATTTCTACCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 72 bp | GCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTaGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: APSWGEAQAPEM*AAGSVAHRGFG Trigger: CCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR CCA 72 bp | AGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAGCGTaGCCCACCGAGGTTTTGGGTTCAGGCGCCCAGATC | + |
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Preference number: 3 (lower is better) Translates to: RLRLRRCGLLGA*PTEVLGSGAQI Trigger: GATCTGGGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGCCTGAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR CCA 72 bp | CAGAAAGATTCCCTGGGTTCTGATGGCGCTCCCTCCTaGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QKDSLGSDGAPS*GEAQAPEMWAA Trigger: AGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCAGGGAATCTTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR TCA 72 bp | TGGCTTGAGGAGAGTGAGAGCTGTCCAGACCTGGCCTaGGCCTGGCAGCAAGCCACACTGTCTCTTTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: WLEESESCPDLA*AWQQATLSLFH Trigger: GTGGAAAAGAGACAGTGTGGCTTGCTGCCAGGCTCAGGCCAGGTCTGGACAGCTCTCACTCTCCTCAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 72 bp | CGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCCCTaGGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: RVSDECGFRKIP*VLMALPPGVRL Trigger: GAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR CCA 72 bp | AGTCCTGGCTTGAGGAGAGTGAGAGCTGTCCAGACCTaGCCTGAGCCTGGCAGCAAGCCACACTGTCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SPGLRRVRAVQT*PEPGSKPHCLF Trigger: AAAGAGACAGTGTGGCTTGCTGCCAGGCTCAGGCCAGGTCTGGACAGCTCTCACTCTCCTCAAGCCAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR TCA 72 bp | CATGCTACCATGGCAACACTAGGACAAGGTGGAGAGTaGCCACAGACCCAGAGCCACACTTCCTACCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: HATMATLGQGGE*PQTQSHTSYPG Trigger: CCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATGGTAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 72 bp | CAGCAAGCCACACTGTCTCTTTTCCACACACGGGGATaGGGACCCACCCTCTTGACAGGATGCATAGATCCC | + |
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Preference number: 3 (lower is better) Translates to: QQATLSLFHTRG*GPTLLTGCIDP Trigger: GGGATCTATGCATCCTGTCAAGAGGGTGGGTCCCCATCCCCGTGTGTGGAAAAGAGACAGTGTGGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 72 bp | GTCCCAGTTCTGCCTCACACAGGCCACAGGCCATGCTaGAAAAGAATCCAGCAGCCACAGAGTAATGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: VPVLPHTGHRPC*KRIQQPQSNVP Trigger: GGGCACATTACTCTGTGGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR TCA 72 bp | AGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGGCTaGCTCCCAATCTGGGAATCAAGGGTCCCAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: RMGISFSPSVLG*LPIWESRVPVL Trigger: CAGAACTGGGACCCTTGATTCCCAGATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CCA 72 bp | CTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTaGCTGACTCCCAATCTGGGAATCAAGGGTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LKNGHFIQPQCP*LTPNLGIKGPS Trigger: ACTGGGACCCTTGATTCCCAGATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR GCA 72 bp | ACCCTCTTGACAGGATGCATAGATCCCCAGGTTAAATaGAAACTACAAAGCCATGCTACCATGGCAACACTA | + |
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Preference number: 3 (lower is better) Translates to: TLLTGCIDPQVK*KLQSHATMATL Trigger: TAGTGTTGCCATGGTAGCATGGCTTTGTAGTTTGCATTTAACCTGGGGATCTATGCATCCTGTCAAGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR TCA 72 bp | AAAAGAAGAGACAGGTCTAAGTGTACGTGTGTCAGATaGGTGTGGCTTCAGAAAGATTCCCTGGGTTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: KRRDRSKCTCVR*VWLQKDSLGSD Trigger: ATCAGAACCCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGTCTCTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| 3UTR TCA 72 bp | AAACAAGTAGCTGGACATGAAGACATGTCTAAAAGATaGAATGCCTCACAGATGAAATGCGAAGTGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: KQVAGHEDMSKR*NASQMKCEVVA Trigger: TGCTACCACTTCGCATTTCATCTGTGAGGCATTTCATCTTTTAGACATGTCTTCATGTCCAGCTACTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR GCA 90 bp | GGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAGCACCAGCAGGTACTTGTaGGCCGCCAGCGCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GAPSWGEAQAPEMWAAGSTSRYL*AASASS Trigger: CGAGGAGGCGCTGGCGGCGCACAAGTACCTGCTGGT...GCTCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR GCA 90 bp | ATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAACCAGCAGGTACTTGTaGGCCGCCAGCGCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: MALPPGVRLRLRRCGLLGTSRYL*AASASS Trigger: CGAGGAGGCGCTGGCGGCGCACAAGTACCTGCTGGT...TCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR GCA 90 bp | CTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGTCCTCATCGTCCCCTaGTCCATCCTGGCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: LMALPPGVRLRLRRCGLLVLIVP*SILATT Trigger: AGTGGTGGCCAGGATGGAGCAGGGGACGATGAGGAC...CAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR GCA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGGTCCTCATCGTCCCCTaGTCCATCCTGGCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: APEMWAAGSVAHRGFGFRVLIVP*SILATT Trigger: AGTGGTGGCCAGGATGGAGCAGGGGACGATGAGGAC...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR TCA 90 bp | GGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAGCCGCCGTTGTAATCAATaGCCGTTCTGTCTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GAPSWGEAQAPEMWAAGSRRCNQ*PFCLHL Trigger: CAAGTGCAGACAGAACGGTCATTGATTACAACGGCG...GCTCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR CCA 90 bp | CGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCTCTTCAGGCACTTCTTaGCTCATCAGGTGGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RRCGLLGAWPTEVLGSGASSGTS*LIRWGL Trigger: CAAGCCCCACCTGATGAGCCAAGAAGTGCCTGAAGA...GGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR GCA 90 bp | GATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCCAGAGCTGCCAGCAAGAACTaGTTGGCAGAGTCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: DVGCWERGPPRFWVQAPRAASKN*LAESDS Trigger: AGAGTCAGACTCTGCCAAGCAGTTCTTGCTGGCAGC...TCTGGGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CCA 90 bp | CGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCTCTGTCTGCACTTGCTaGGAAGAACTTCAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RRCGLLGAWPTEVLGSGASVCTC*EELQCG Trigger: CCCACACTGAAGTTCTTCCCAGCAAGTGCAGACAGA...GGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR TCA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGTCCTTCACAGCTTTCTaGTCGTCGTCTTCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: APEMWAAGSVAHRGFGFRSFTAF*SSSSSM Trigger: CATGGAGGAAGACGACGATCAGAAAGCTGTGAAGGA...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTCCAGCAAGAACTGCTTaGCAGAGTCTGACTCTACGT | + |
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Preference number: 4 (lower is better) Translates to: GSDGAPSWGEAQAPEMWAPARTA*QSLTLR Trigger: ACGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCTGG...AGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGCCAGTTTATCCCAAATaGGGGCTAGCTGCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLGSDGAPSWGEAQAPEMPVYPK*GLAACS Trigger: ACTGCAAGCAGCTAGCCCCCATTTGGGATAAACTGG...CATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR TCA 90 bp | CGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCATGACCAAAGGCAGCTaGTTGTGCTTGATGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RRCGLLGAWPTEVLGSGAMTKGS*LCLMKS Trigger: AGACTTCATCAAGCACAATCAGCTGCCTTTGGTCAT...GGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR TCA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGGAAAGCTATGTACTTTaGCAGCTTCCACCTCATTGG | + |
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Preference number: 4 (lower is better) Translates to: APEMWAAGSVAHRGFGFRESYVL*QLPPHW Trigger: CCAATGAGGTGGAAGCTGTCAAAGTACATAGCTTTC...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTAATGACCGTTCTGTCTaGACTTGCTGGGAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: SDGAPSWGEAQAPEMWAANDRSV*TCWEEL Trigger: AAGTTCTTCCCAGCAAGTGCAGACAGAACGGTCATT...AGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS-3UTR TCA 90 bp | AGAGTGACCACAGACCCAGAGCCACACTTCCTACCCAGGGCAGGAAGAAGGCTCGGTGGCAAAACTCTGTaGTTTTCTCAGCCGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RVTTDPEPHFLPRAGRRLGGKTL*FSQPSA Trigger: AGCTGACGGCTGAGAAAATCACAGAGTTTTGCCACC...GAGCCTTCTTCCTGCCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR TCA 90 bp | CCCAGTTCTGCCTCACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCCGCCGTTGTAATCAATaGCCGTTCTGTCTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: PSSASHRPQAMLEKNPAARRCNQ*PFCLHL Trigger: CAAGTGCAGACAGAACGGTCATTGATTACAACGGCG...GGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR GCA 90 bp | CCAGGGCAGGAAGAAGGCTCAGGGAGGTCTGCCATGGTGAAACAAGTAGCTGGACAAGGACTCTGCAGCTaGAGTGTCAGACAGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PGQEEGSGRSAMVKQVAGQGLCS*SVRQGC Trigger: ACAACCCTGTCTGACACTGCAGCTGCAGAGTCCTTG...TCCAGCTACTTGTTTCACCATGGCAGACCTCCCTGAGCCTTCTTCCTGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR TCA 90 bp | CCCAGTTCTGCCTCACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCGTTTCTTCAGCCAGTTaGCAATGTCATCAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PSSASHRPQAMLEKNPAAVSSAS*QCHQLP Trigger: GGGAAGCTGATGACATTGTCAACTGGCTGAAGAAAC...GGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CCA 90 bp | CCAGTTCTGCCTCACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCATCTGTCTGCACTTGCTaGGAAGAACTTCAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PVLPHTGHRPCWKRIQQPSVCTC*EELQCG Trigger: CCCACACTGAAGTTCTTCCCAGCAAGTGCAGACAGA...TGGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| 3UTR CAA 72 bp | CCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTaGGCTGACTCCCAATCTGGGAATCAAGGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PEEWAFHSAPVS*ADSQSGNQGSQ Trigger: CTGGGACCCTTGATTCCCAGATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR TCA 90 bp | TGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGGCTGACTCCCAATCGGACACCATACTGCTaGGCCAGGTCAGACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CLKNGHFIQPQCPWLTPNRTPYC*ARSDSS Trigger: AGAAGAGTCTGACCTGGCTCAGCAGTATGGTGTCCG...ATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR TCA 90 bp | AGAGTGACCACAGACCCAGAGCCACACTTCCTACCCAGGGCAGGAAGAAGGCTCGAAAGCTATGTACTTTaGCAGCTTCCACCTCATTGG | + |
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Preference number: 4 (lower is better) Translates to: RVTTDPEPHFLPRAGRRLESYVL*QLPPHW Trigger: CCAATGAGGTGGAAGCTGTCAAAGTACATAGCTTTC...GAGCCTTCTTCCTGCCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CCA 90 bp | CCCAGTTCTGCCTCACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCAACTCAAGTATGCGCTaGTTATCAGTGTGGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSASHRPQAMLEKNPAANSSMR*LSVWSL Trigger: TAGCGACCACACTGATAACCAGCGCATACTTGAGTT...GGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGTGAGGCAGAACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR TCA 90 bp | AGAGTGACCACAGACCCAGAGCCACACTTCCTACCCAGGGCAGGAAGAAGGCTCGCAGAATGTGTGTCTTaGTCTCACCTCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTTDPEPHFLPRAGRRLAECVS*SHLQKS Trigger: AGATTTTTGGAGGTGAGATCAAGACACACATTCTGC...GAGCCTTCTTCCTGCCCTGGGTAGGAAGTGTGGCTCTGGGTCTGTGGTCACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATCCAGCAGCCACAGAGTAATGTGCCCATAGCCGGCTGGTCGGTAGTCTCCTTCACAGCTTTCTaGTCGTCGTCTTCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KRIQQPQSNVPIAGWSVVSFTAF*SSSSSM Trigger: CATGGAGGAAGACGACGATCAGAAAGCTGTGAAGGA...GACTACCGACCAGCCGGCTATGGGCACATTACTCTGTGGCTGCTGGATTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCACAGAGTAATGTGCCCATAGGTCAGACTCTTCTGTaGCATCCACCTTTGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHRPCWKRIQQPQSNVPIGQTLL*HPPLLV Trigger: GACTAGCAAAGGTGGATGCCACAGAAGAGTCTGACC...TATGGGCACATTACTCTGTGGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR TCA 90 bp | AAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGGACCCTCGGCTGCTCTCTTaGAGCTGCTCAGCTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDITSVRRSPNILASTWDPRLLS*SCSACR Trigger: ACGGCAAGCTGAGCAGCTTCAAGAGAGCAGCCGAGG...GTCCCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCACAGAGTAATGTGCCCATACCATCTTTGTCCAGCTaGTACTTGGAGAACACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GHRPCWKRIQQPQSNVPIPSLSS*YLENTP Trigger: TGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGG...TATGGGCACATTACTCTGTGGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCCACAGGCCATGCTGGAAAAGAATCCAGCAGCCACAGAGTAATGTGCCGCTGGTTATCAGTGTaGTCGCTATCGATGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TQATGHAGKESSSHRVMCRWLSV*SLSMKI Trigger: TATCTTCATCGATAGCGACCACACTGATAACCAGCG...GCACATTACTCTGTGGCTGCTGGATTCTTTTCCAGCATGGCCTGTGGCCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CCA 90 bp | AAAAGAATCCAGCAGCCACAGAGTAATGTGCCCATAGCCGGCTGGTCGGTAGTCACTCTGGTTTGTACTTaGTCATCTCTTCCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRIQQPQSNVPIAGWSVVTLVCT*SSLPLG Trigger: CCCTAGAGGAAGAGATGACCAAGTACAAACCAGAGT...GACTACCGACCAGCCGGCTATGGGCACATTACTCTGTGGCTGCTGGATTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | GGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCCCTGGGTTATCAATAGCCTCTGCTaGCAGCAAGAACTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSVRVSDECGFRKIPWVINSLC*QQELLG Trigger: GCCAAGCAGTTCTTGCTGGCAGCAGAGGCTATTGAT...AACCCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | GAAGAGACAGGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCTTGAAGCCCTCGGCTaGTCTCTTGAAGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EETGLSVRVSDECGFRKILEALG*SLEAAQ Trigger: CTGAGCAGCTTCAAGAGAGCAGCCGAGGGCTTCAAG...AATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR TCA 90 bp | GAAGAGACAGGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTTCATCAGGTGGGGCTTaGTCTTGCCCTCTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EETGLSVRVSDECGFRKISSGGA*SCPLRS Trigger: GCTTCTTAGAGGGCAAGATCAAGCCCCACCTGATGA...AATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGTCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCCCTGGTTCTGCCTTCAGTTTTaGGGCAGCTTTGGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSVRVSDECGFRKIPWFCLQF*GSFGIL Trigger: GAGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAA...CCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR TCA 90 bp | ATTATGGTAGAAATGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGCTGCTTGGCAGAGTCTaGCTCTACGTCCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IMVEMPEEWAFHSAPVSLLLGRV*LYVLEE Trigger: TTCTTCAAGGACGTAGAGTCAGACTCTGCCAAGCAG...CAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCATTTCTACCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | CAGGTTAAATGCAAACTACAAAGCCATGCTACCATGGCAACACTAGGACAAGGTAATCTCAGAGCCTTCTaGCTTCAGTTTTGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVKCKLQSHATMATLGQGNLRAF*LQFCGS Trigger: GCTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGATT...ACCTTGTCCTAGTGTTGCCATGGTAGCATGGCTTTGTAGTTTGCATTTAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | ACAGATGAAATGCGAAGTGGTAGCATAAACCTCTCTAACAGGAAAGACATTACCGTCCACCAAGGACTCTaGAGCTGCAGTGTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TDEMRSGSINLSNRKDITVHQGL*SCSVRQ Trigger: CTGTCTGACACTGCAGCTGCAGAGTCCTTGGTGGAC...GGTAATGTCTTTCCTGTTAGAGAGGTTTATGCTACCACTTCGCATTTCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CCA 90 bp | ATTATGGTAGAAATGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGCCAGTTTATCCCAAATaGGGGCTAGCTGCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IMVEMPEEWAFHSAPVSLPVYPK*GLAACS Trigger: ACTGCAAGCAGCTAGCCCCCATTTGGGATAAACTGG...CAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCATTTCTACCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | GAAGAGACAGGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTTGTCATCAGCTTCCCTaGCAGCTGTATATTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EETGLSVRVSDECGFRKICHQLP*QLYIPL Trigger: CAAAGGAATATACAGCTGGCAGGGAAGCTGATGACA...AATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGTCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | GACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGGACAAACACCCTCAAAGTTGTTaGGGCCTTCATCAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DITSVRRSPNILASTWDKHPQSC*GLHQTS Trigger: AGAAGTTTGATGAAGGCCGCAACAACTTTGAGGGTG...TTTGTCCCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGGACAATGACCGTTCTGTCTaGACTTGCTGGGAAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KDITSVRRSPNILASTWDNDRSV*TCWEEL Trigger: AAGTTCTTCCCAGCAAGTGCAGACAGAACGGTCATT...GTCCCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | CTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGTCCACCAGCAGGTACTaGTGCGCCGCCAGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMALPPGVRLRLRRCGLLSTSRY*CAASAS Trigger: GGAGGCGCTGGCGGCGCACAAGTACCTGCTGGTGGA...CAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCCAGATCCACCAGCAGGTACTaGTGCGCCGCCAGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVGCWERGPPRFWVQAPRSTSRY*CAASAS Trigger: GGAGGCGCTGGCGGCGCACAAGTACCTGCTGGTGGA...TCTGGGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGCCCCCTCGGCTGCTCTCTaGAAGCTGCTCAGCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRCGLLGAWPTEVLGSGAPSAAL*KLLSLP Trigger: CGGCAAGCTGAGCAGCTTCAAGAGAGCAGCCGAGGG...GGCGCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGTTCAACACCAGGACGTaGTCCTCCTCCTCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APEMWAAGSVAHRGFGFRFNTRT*SSSSRA Trigger: CGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAA...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGGCCAGCAAGAACTGCTaGGCAGAGTCTGACTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: WVLMALPPGVRLRLRRCGASKNC*AESDST Trigger: CGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCTGGC...CCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGGTCTTCAGGCACTTCTaGGCTCATCAGGTGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APEMWAAGSVAHRGFGFRVFRHF*AHQVGL Trigger: AAGCCCCACCTGATGAGCCAAGAAGTGCCTGAAGAC...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS GCA 90 bp | ACTCCACCAGCAGGTACTTGTGCGCCGCCAGCGCCTCCTCGAAGTTaGTCTTCTTCAACACCAGGACGTTGTCCTCCTCCTCCAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TPPAGTCAPPAPPRS*SSSTPGRCPPPPGR Trigger: ACGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGCGCTGGCGGCGCACAAGTACCTGCTGGTGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCTTCTGCCTTCAGTTTaGCGGCAGCTTTGGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: APEMWAAGSVAHRGFGFRLLPSV*RQLWHT Trigger: AGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAAG...CCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | ATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGGGAGCTGTGTCTCCATTCTaGAAGAACTTGATTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MALPPGVRLRLRRCGLLGAVSPF*KNLIVG Trigger: CCCCACAATCAAGTTCTTCAAGAATGGAGACACAGC...TCCCAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | CTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGCTGCTGTCTAGAAGCTTCTCCTaGGTGATCTCACCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMALPPGVRLRLRRCGLLSRSFS*VISPSK Trigger: CTTTGAGGGTGAGATCACCAAGGAGAAGCTTCTAGA...CAGCAGCCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | CTCCGGAGATGTGGGCTGCTGGGAGCGTGGCCCACCGAGGTTTTGGGTTCAGGCGACTCTGGTTTGTACTaGGTCATCTCTTCCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRRCGLLGAWPTEVLGSGDSGLY*VISSSR Trigger: CCTAGAGGAAGAGATGACCAAGTACAAACCAGAGTC...GCCTGAACCCAAAACCTCGGTGGGCCACGCTCCCAGCAGCCCACATCTCCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTGATGGCGCTCCCTCCTGGGGTGAGGCTCAGGCTCCGGAGATGTGGGACAGCTTCCACCTCATaGGCTGTTGAGTCCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WVLMALPPGVRLRLRRCGTASTS*AVESIL Trigger: TAAGATGGACTCAACAGCCAATGAGGTGGAAGCTGT...CCCACATCTCCGGAGCCTGAGCCTCACCCCAGGAGGGAGCGCCATCAGAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS GCA 90 bp | GTCCACCAAGGACTCTGCAGCTGCAGTGTCAGACAGGGTTGTAGCTaGTGGGCCCGTGCGTTTCTTCAGCCAGTTGACAATGTCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHQGLCSCSVRQGCS*WARAFLQPVDNVIS Trigger: GCTGATGACATTGTCAACTGGCTGAAGAAACGCACGGGCCCAGCAGCTACAACCCTGTCTGACACTGCAGCTGCAGAGTCCTTGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | CACCAAGGACTCTGCAGCTGCAGTGTCAGACAGGGTTGTAGCTGCTaGGCCCGTGCGTTTCTTCAGCCAGTTGACAATGTCATCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HQGLCSCSVRQGCSC*ARAFLQPVDNVISF Trigger: GAAGCTGATGACATTGTCAACTGGCTGAAGAAACGCACGGGCCCAGCAGCTACAACCCTGTCTGACACTGCAGCTGCAGAGTCCTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | CATGGCAACACTAGGACAAGGTGGAGAGTGACCACAGACCCAGAGCCACACTTCAGGACCACCCCATCTTaGTCCAGCTGGTACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HGNTRTRWRVTTDPEPHFRTTPS*SSWYLE Trigger: CTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCT...GAAGTGTGGCTCTGGGTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | GGTAGCCACGGACACCATACTGCTGAGCCAGGTCAGACTCTTCTGTaGCATCCACCTTTGCTAGTCGAATCTCAGAGCCTTCTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSHGHHTAEPGQTLL*HPPLLVESQSLLPS Trigger: TGAAGGCAGAAGGCTCTGAGATTCGACTAGCAAAGGTGGATGCCACAGAAGAGTCTGACCTGGCTCAGCAGTATGGTGTCCGTGGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | ACCAGTACTTTTACCGGCTGTTTGTCCCAGTCTTCAGGCACTTCTTaGCTCATCAGGTGGGGCTTGATCTTGCCCTCTAAGAAGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSTFTGCLSQSSGTS*LIRWGLILPSKKRW Trigger: CCACCGCTTCTTAGAGGGCAAGATCAAGCCCCACCTGATGAGCCAAGAAGTGCCTGAAGACTGGGACAAACAGCCGGTAAAAGTACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCTAAGTGTACGTGTGTCAGATGAGTGTGGCTTCAGAAAGATTCCCTGGTTCAACACCAGGACGTaGTCCTCCTCCTCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGLSVRVSDECGFRKIPWFNTRT*SSSSRA Trigger: CGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAA...CCAGGGAATCTTTCTGAAGCCACACTCATCTGACACACGTACACTTAGACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCCATGCTACCATGGCAACACTAGGACAAGGTGGAGAGTGACCACAGACAAGATAAATAGGATCTaGCCCTTGAAGCCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TKPCYHGNTRTRWRVTTDKINRI*PLKPSA Trigger: AGCCGAGGGCTTCAAGGGCAAGATCCTATTTATCTT...GTCTGTGGTCACTCTCCACCTTGTCCTAGTGTTGCCATGGTAGCATGGCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | TGCCTGAAGAATGGGCATTTCATTCAGCCCCAGTGTCCTTGGCTGACTCCCAATACAGCTTCCACCTCATaGGCTGTTGAGTCCATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CLKNGHFIQPQCPWLTPNTASTS*AVESIL Trigger: TAAGATGGACTCAACAGCCAATGAGGTGGAAGCTGT...ATTGGGAGTCAGCCAAGGACACTGGGGCTGAATGAAATGCCCATTCTTCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | TGTCCGCTCGCCGTTGTAATCAATGACCGTTCTGTCTGCACTTGCTaGGAAGAACTTCAGTGTGGGAAAGCTATGTACTTTGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPLAVVINDRSVCTC*EELQCGKAMYFDSF Trigger: GAAGCTGTCAAAGTACATAGCTTTCCCACACTGAAGTTCTTCCCAGCAAGTGCAGACAGAACGGTCATTGATTACAACGGCGAGCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
||
| CDS GCA 90 bp | ATTCCAAAAGGTATGTCATCAATAGCCTCTGCTGCCAGCAAGAACTaGTTGGCAGAGTCTGACTCTACGTCCTTGAAGAAACCGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: IPKGMSSIASAASKN*LAESDSTSLKKPMT Trigger: GGTCATCGGTTTCTTCAAGGACGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCTGGCAGCAGAGGCTATTGATGACATACCTTTTGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | GCGGGACACTCCTCCTTCTTCAGGCCAAAGAACTCAAGTATGCGCTaGTTATCAGTGTGGTCGCTATCGATGAAGATAAATAGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGHSSFFRPKNSSMR*LSVWSLSMKINRIL Trigger: CAAGATCCTATTTATCTTCATCGATAGCGACCACACTGATAACCAGCGCATACTTGAGTTCTTTGGCCTGAAGAAGGAGGAGTGTCCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | CCTTCATCAAACTTCTTAAAGAGGACCACCCCATCTTTGTCCAGCTaGTACTTGGAGAACACACCACTGTTGGACGTGATTCCAAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSNFLKRTTPSLSS*YLENTPLLDVIPKG Trigger: ACCTTTTGGAATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAAGAAGTTTGATGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS CCA 90 bp | TCCTTCTTCAGGCCAAAGAACTCAAGTATGCGCTGGTTATCAGTGTaGTCGCTATCGATGAAGATAAATAGGATCTTGCCCTTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFFRPKNSSMRWLSV*SLSMKINRILPLKP Trigger: GGGCTTCAAGGGCAAGATCCTATTTATCTTCATCGATAGCGACCACACTGATAACCAGCGCATACTTGAGTTCTTTGGCCTGAAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGTCACCCTCAAAGTTGTaGCGGCCTTCATCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKDITSVRRSPNILASTWSPSKL*RPSSNF Trigger: GAAGTTTGATGAAGGCCGCAACAACTTTGAGGGTGA...CCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGATCTCACCCTCAAAGTaGTTGCGGCCTTCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKDITSVRRSPNILASTWISPSK*LRPSSN Trigger: GTTTGATGAAGGCCGCAACAACTTTGAGGGTGAGAT...CCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CAA 90 bp | ACAGATGAAATGCGAAGTGGTAGCATAAACCTCTCTAACAGGAAAGACATTACCTTGTCCAGCTGGTACTaGGAGAACACACCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TDEMRSGSINLSNRKDITLSSWY*ENTPLL Trigger: CAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAA...GGTAATGTCTTTCCTGTTAGAGAGGTTTATGCTACCACTTCGCATTTCATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS-3UTR CAA 90 bp | AAAGACATTACCAGTGTGAGGAGATCCCCAAACATTTTAGCAAGCACATGGGACAGCAGAATGTGTGTCTaGATCTCACCTCCAAAAATC | + |
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Preference number: 5 (lower is better) Translates to: KDITSVRRSPNILASTWDSRMCV*ISPPKI Trigger: GATTTTTGGAGGTGAGATCAAGACACACATTCTGCT...GTCCCATGTGCTTGCTAAAATGTTTGGGGATCTCCTCACACTGGTAATGTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | GCCGCCAGCGCCTCCTCGAAGTTGCTCTTCTTCAACACCAGGACGTaGTCCTCCTCCTCCAGGGCGTCGGCGCCCACCCTAGCCGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AASASSKLLFFNTRT*SSSSRASAPTLAAQ Trigger: CTGGGCGGCTAGGGTGGGCGCCGACGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGCGCTGGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 72 bp | GCCTCCTCGAAGTTGCTCTTCTTCAACACCAGGACGTaGTCCTCCTCCTCCAGGGCGTCGGCGCCCACCCTA | + |
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Preference number: 6 (lower is better) Translates to: ASSKLLFFNTRT*SSSSRASAPTL Trigger: TAGGGTGGGCGCCGACGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 90 bp | AACTCCACCAGCAGGTACTTGTGCGCCGCCAGCGCCTCCTCGAAGTaGCTCTTCTTCAACACCAGGACGTTGTCCTCCTCCTCCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: NSTSRYLCAASASSK*LFFNTRTLSSSSRA Trigger: CGCCCTGGAGGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGCGCTGGCGGCGCACAAGTACCTGCTGGTGGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS GCA 72 bp | GCAGGTACTTGTGCGCCGCCAGCGCCTCCTCGAAGTTaGTCTTCTTCAACACCAGGACGTTGTCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: AGTCAPPAPPRS*SSSTPGRCPPP Trigger: AGGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGCGCTGGCGGCGCACAAGTACCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 72 bp | AGCAGGTACTTGTGCGCCGCCAGCGCCTCCTCGAAGTaGCTCTTCTTCAACACCAGGACGTTGTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRYLCAASASSK*LFFNTRTLSSS Trigger: GGAGGAGGACAACGTCCTGGTGTTGAAGAAGAGCAACTTCGAGGAGGCGCTGGCGGCGCACAAGTACCTGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS GCA 72 bp | GGACTCTGCAGCTGCAGTGTCAGACAGGGTTGTAGCTaGTGGGCCCGTGCGTTTCTTCAGCCAGTTGACAAT | + |
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Preference number: 6 (lower is better) Translates to: GLCSCSVRQGCS*WARAFLQPVDN Trigger: ATTGTCAACTGGCTGAAGAAACGCACGGGCCCAGCAGCTACAACCCTGTCTGACACTGCAGCTGCAGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | TCTCAGAGCCTTCTGCCTTCAGTTTTGCGGCAGCTTTaGCATACTCGGGAGCCAGAGCTTTGCAGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SQSLLPSVLRQL*HTREPELCSGH Trigger: GTGGCCACTGCAAAGCTCTGGCTCCCGAGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | CTCTGCAGCTGCAGTGTCAGACAGGGTTGTAGCTGCTaGGCCCGTGCGTTTCTTCAGCCAGTTGACAATGTC | + |
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Preference number: 6 (lower is better) Translates to: LCSCSVRQGCSC*ARAFLQPVDNV Trigger: GACATTGTCAACTGGCTGAAGAAACGCACGGGCCCAGCAGCTACAACCCTGTCTGACACTGCAGCTGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | ATCTCAGAGCCTTCTGCCTTCAGTTTTGCGGCAGCTTaGGCATACTCGGGAGCCAGAGCTTTGCAGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISEPSAFSFAAA*AYSGARALQWP Trigger: TGGCCACTGCAAAGCTCTGGCTCCCGAGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | CATCCACCTTTGCTAGTCGAATCTCAGAGCCTTCTGCCTTCAGTTTaGCGGCAGCTTTGGCATACTCGGGAGCCAGAGCTTTGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HPPLLVESQSLLPSV*RQLWHTREPELCSG Trigger: GCCACTGCAAAGCTCTGGCTCCCGAGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGATTCGACTAGCAAAGGTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS TCA 72 bp | AGCCTCTGCTGCCAGCAAGAACTGCTTGGCAGAGTCTaGCTCTACGTCCTTGAAGAAACCGATGACCGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SLCCQQELLGRV*LYVLEETDDRH Trigger: GTGACGGTCATCGGTTTCTTCAAGGACGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCTGGCAGCAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | CACCATACTGCTGAGCCAGGTCAGACTCTTCTGTGGCATCCACCTTaGCTAGTCGAATCTCAGAGCCTTCTGCCTTCAGTTTTGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HHTAEPGQTLLWHPP*LVESQSLLPSVLRQ Trigger: CTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGATTCGACTAGCAAAGGTGGATGCCACAGAAGAGTCTGACCTGGCTCAGCAGTATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS TCA 72 bp | TACGTCCTTGAAGAAACCGATGACCGTCACTTCGCTTaGGTCCACCAAGGACTCTGCAGCTGCAGTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YVLEETDDRHFA*VHQGLCSCSVR Trigger: TCTGACACTGCAGCTGCAGAGTCCTTGGTGGACTCAAGCGAAGTGACGGTCATCGGTTTCTTCAAGGACGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | GGACACCATACTGCTGAGCCAGGTCAGACTCTTCTGTaGCATCCACCTTTGCTAGTCGAATCTCAGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GHHTAEPGQTLL*HPPLLVESQSL Trigger: AAGGCTCTGAGATTCGACTAGCAAAGGTGGATGCCACAGAAGAGTCTGACCTGGCTCAGCAGTATGGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | TTTACCGGCTGTTTGTCCCAGTCTTCAGGCACTTCTTaGCTCATCAGGTGGGGCTTGATCTTGCCCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: FTGCLSQSSGTS*LIRWGLILPSK Trigger: CTTAGAGGGCAAGATCAAGCCCCACCTGATGAGCCAAGAAGTGCCTGAAGACTGGGACAAACAGCCGGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | TTGCTAGTCGAATCTCAGAGCCTTCTGCCTTCAGTTTaGCGGCAGCTTTGGCATACTCGGGAGCCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLVESQSLLPSV*RQLWHTREPEL Trigger: AAGCTCTGGCTCCCGAGTATGCCAAAGCTGCCGCAAAACTGAAGGCAGAAGGCTCTGAGATTCGACTAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS GCA 72 bp | TGTCCGCTCGCCGTTGTAATCAATGACCGTTCTGTCTaGACTTGCTGGGAAGAACTTCAGTGTGGGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: CPLAVVINDRSV*TCWEELQCGKA Trigger: AGCTTTCCCACACTGAAGTTCTTCCCAGCAAGTGCAGACAGAACGGTCATTGATTACAACGGCGAGCGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 72 bp | AGCAAGAACTGCTTGGCAGAGTCTGACTCTACGTCCTaGAAGAAACCGATGACCGTCACTTCGCTTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SKNCLAESDSTS*KKPMTVTSLES Trigger: GGACTCAAGCGAAGTGACGGTCATCGGTTTCTTCAAGGACGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | CCAAAAGGTATGTCATCAATAGCCTCTGCTGCCAGCAAGAACTGCTaGGCAGAGTCTGACTCTACGTCCTTGAAGAAACCGATGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: PKGMSSIASAASKNC*AESDSTSLKKPMTV Trigger: GACGGTCATCGGTTTCTTCAAGGACGTAGAGTCAGACTCTGCCAAGCAGTTCTTGCTGGCAGCAGAGGCTATTGATGACATACCTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | ACCACCCCATCTTTGTCCAGCTGGTACTTGGAGAACACACCACTGTaGGACGTGATTCCAAAAGGTATGTCATCAATAGCCTCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TTPSLSSWYLENTPL*DVIPKGMSSIASAA Trigger: GGCAGCAGAGGCTATTGATGACATACCTTTTGGAATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | TCTGTGATTTTCTCAGCCGTCAGCTCATCTGACTCTGGTTTGTACTaGGTCATCTCTTCCTCTAGGGTAATAAGCCGCACAGCGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: SVIFSAVSSSDSGLY*VISSSRVISRTAGH Trigger: GTGTCCCGCTGTGCGGCTTATTACCCTAGAGGAAGAGATGACCAAGTACAAACCAGAGTCAGATGAGCTGACGGCTGAGAAAATCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | TTCTCAGCCGTCAGCTCATCTGACTCTGGTTTGTACTaGGTCATCTCTTCCTCTAGGGTAATAAGCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: FSAVSSSDSGLY*VISSSRVISRT Trigger: TGTGCGGCTTATTACCCTAGAGGAAGAGATGACCAAGTACAAACCAGAGTCAGATGAGCTGACGGCTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | GCTGGGAAGAACTTCAGTGTGGGAAAGCTATGTACTTaGACAGCTTCCACCTCATTGGCTGTTGAGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: AGKNFSVGKLCT*TASTSLAVESI Trigger: GATGGACTCAACAGCCAATGAGGTGGAAGCTGTCAAAGTACATAGCTTTCCCACACTGAAGTTCTTCCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 90 bp | TTGTTGCGGCCTTCATCAAACTTCTTAAAGAGGACCACCCCATCTTaGTCCAGCTGGTACTTGGAGAACACACCACTGTTGGACGTGATT | + |
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Preference number: 6 (lower is better) Translates to: LLRPSSNFLKRTTPS*SSWYLENTPLLDVI Trigger: AATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAAGAAGTTTGATGAAGGCCGCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | CAAAACTCTGTGATTTTCTCAGCCGTCAGCTCATCTGACTCTGGTTaGTACTTGGTCATCTCTTCCTCTAGGGTAATAAGCCGCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: QNSVIFSAVSSSDSG*YLVISSSRVISRTA Trigger: CGCTGTGCGGCTTATTACCCTAGAGGAAGAGATGACCAAGTACAAACCAGAGTCAGATGAGCTGACGGCTGAGAAAATCACAGAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | AACTTCTTAAAGAGGACCACCCCATCTTTGTCCAGCTaGTACTTGGAGAACACACCACTGTTGGACGTGATT | + |
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Preference number: 6 (lower is better) Translates to: NFLKRTTPSLSS*YLENTPLLDVI Trigger: AATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAAGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | TTAAAGAGGACCACCCCATCTTTGTCCAGCTGGTACTaGGAGAACACACCACTGTTGGACGTGATTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LKRTTPSLSSWY*ENTPLLDVIPK Trigger: TTTTGGAATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | CCTTCATCAAACTTCTTAAAGAGGACCACCCCATCTTaGTCCAGCTGGTACTTGGAGAACACACCACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSSNFLKRTTPS*SSWYLENTPLL Trigger: CAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAAGAAGTTTGATGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | AGAAGCTTCTCCTTGGTGATCTCACCCTCAAAGTTGTaGCGGCCTTCATCAAACTTCTTAAAGAGGACCACC | + |
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Preference number: 6 (lower is better) Translates to: RSFSLVISPSKL*RPSSNFLKRTT Trigger: GGTGGTCCTCTTTAAGAAGTTTGATGAAGGCCGCAACAACTTTGAGGGTGAGATCACCAAGGAGAAGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | GATACACTCTTGGGCAGGAACAGCAGAATGTGTGTCTaGATCTCACCTCCAAAAATCTTCGGAGCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DTLLGRNSRMCV*ISPPKIFGAVC Trigger: ACAGACAGCTCCGAAGATTTTTGGAGGTGAGATCAAGACACACATTCTGCTGTTCCTGCCCAAGAGTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | TCAAACTTCTTAAAGAGGACCACCCCATCTTTGTCCAGCTGGTACTaGGAGAACACACCACTGTTGGACGTGATTCCAAAAGGTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: SNFLKRTTPSLSSWY*ENTPLLDVIPKGMS Trigger: TGACATACCTTTTGGAATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGATGGGGTGGTCCTCTTTAAGAAGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 90 bp | TTGATGAAGTCTAGAAGCTTCTCCTTGGTGATCTCACCCTCAAAGTaGTTGCGGCCTTCATCAAACTTCTTAAAGAGGACCACCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: LMKSRSFSLVISPSK*LRPSSNFLKRTTPS Trigger: AGATGGGGTGGTCCTCTTTAAGAAGTTTGATGAAGGCCGCAACAACTTTGAGGGTGAGATCACCAAGGAGAAGCTTCTAGACTTCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CCA 72 bp | GCCGTTGTAATCAATGACCGTTCTGTCTGCACTTGCTaGGAAGAACTTCAGTGTGGGAAAGCTATGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: AVVINDRSVCTC*EELQCGKAMYF Trigger: AAAGTACATAGCTTTCCCACACTGAAGTTCTTCCCAGCAAGTGCAGACAGAACGGTCATTGATTACAACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026122.11 ENSMUST00000168360.2 |
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| CDS CAA 72 bp | TCTTTGTCCAGCTGGTACTTGGAGAACACACCACTGTaGGACGTGATTCCAAAAGGTATGTCATCAATAGCC | + |
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Preference number: 6 (lower is better) Translates to: SLSSWYLENTPL*DVIPKGMSSIA Trigger: GGCTATTGATGACATACCTTTTGGAATCACGTCCAACAGTGGTGTGTTCTCCAAGTACCAGCTGGACAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | TCTAGAAGCTTCTCCTTGGTGATCTCACCCTCAAAGTaGTTGCGGCCTTCATCAAACTTCTTAAAGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SRSFSLVISPSK*LRPSSNFLKRT Trigger: GGTCCTCTTTAAGAAGTTTGATGAAGGCCGCAACAACTTTGAGGGTGAGATCACCAAGGAGAAGCTTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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| CDS CAA 72 bp | GTGATTTTCTCAGCCGTCAGCTCATCTGACTCTGGTTaGTACTTGGTCATCTCTTCCTCTAGGGTAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: VIFSAVSSSDSG*YLVISSSRVIS Trigger: GCTTATTACCCTAGAGGAAGAGATGACCAAGTACAAACCAGAGTCAGATGAGCTGACGGCTGAGAAAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026122.11 |
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