Pregenerated sensors for P4HA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019916Ensembl transcript IDs: ENSMUST00000009789.15, ENSMUST00000092512.11, ENSMUST00000105466.3
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCAGCAGTCCACACATCGGAAGAGCAGCACACTGGCGTCTGCATaGCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: AQQSTHRKSSTLASA*LPSVSPQALLACHL Trigger: CAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTTCCGATGTGTGGACTGCTGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR GCA 90 bp | CAGTGCTCAGCAGTCCACACATCGGAAGAGCAGCACACTGGCGTCTaGATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: QCSAVHTSEEQHTGV*MPAVCKPTGSARLP Trigger: TGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTTCCGATGTGTGGACTGCTGAGCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR GCA 90 bp | AATGAGCCGGAGCCCCGTGTAAAGAATTCCTTCATATTCATCAAGTaGAGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: NEPEPRVKNSFIFIK*RAETTPLLLNCSSE Trigger: CTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCTGCACTTGATGAATATGAAGGAATTCTTTACACGGGGCTCCGGCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR TCA 90 bp | GGCACAGAATTGAATCAGAATGCCAACACCAGTGCCTGCTGCAGCTaGTTGGCACTTGGAACAGTCTCTGGACAACCTGCAGTCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: GTELNQNANTSACCS*LALGTVSGQPAVTE Trigger: CTCAGTGACTGCAGGTTGTCCAGAGACTGTTCCAAGTGCCAATCAGCTGCAGCAGGCACTGGTGTTGGCATTCTGATTCAATTCTGTGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR CCA 90 bp | TGCAGGGTCTTCACTGTAACAACACACACCAAAGCCTCACCATCCTaGAACAAATTCCCCGAAGCTTATCCCAAGGGAGCCTGTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CRVFTVTTHTKASPS*NKFPEAYPKGACSG Trigger: CCCAGAACAGGCTCCCTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGTTGTTACAGTGAAGACCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR CCA 90 bp | AGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTaGTTTCAACAAAGTCCCCACTTTCTCATCAGTACTCAGGATATA | + |
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Preference number: 1 (lower is better) Translates to: RPRDGVFPHVFIGHC*FQQSPHFLISTQDI Trigger: TATATCCTGAGTACTGATGAGAAAGTGGGGACTTTGTTGAAACCAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CCA 90 bp | CAGATCTCACACATTCTAGGCAACTTTATTGTCCTGATAGGACCCTaGGTTAACACTGCTGATCTTCTTAAAGGCCCAGAGATGGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: QISHILGNFIVLIGP*VNTADLLKGPEMEC Trigger: ACACTCCATCTCTGGGCCTTTAAGAAGATCAGCAGTGTTAACCCAGGGTCCTATCAGGACAATAAAGTTGCCTAGAATGTGTGAGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CCA 90 bp | TTGCTTCCTCTTTATGGTGATTACAAACAATCCTGTTATGAGCACTaGTATAAACATTCCACCCCTGTCTTCATTTCATATCCAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: LLPLYGDYKQSCYEH*YKHSTPVFISYPET Trigger: TGTTTCTGGATATGAAATGAAGACAGGGGTGGAATGTTTATACCAGTGCTCATAACAGGATTGTTTGTAATCACCATAAAGAGGAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | AGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTACAACCTGCAGTCACTaGGGAAAAGGGCGAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RAETTPLLLNCSSEELQGTTCSH*GKGRRL Trigger: CAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGT...ACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTGAATGCCAACACCAGTaGCTGCTGCAGCTGATTGGC | + |
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Preference number: 2 (lower is better) Translates to: RAETTPLLLNCSSEELQGECQHQ*LLQLIG Trigger: GCCAATCAGCTGCAGCAGGCACTGGTGTTGGCATTC...ACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGTGCAGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAAGTGATTGTCCACAGGTaGGACATGGGGCTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: IKCRAETTPLLLNCSSEEVIVHR*DMGLRL Trigger: GAGCCTCAGCCCCATGTCTCACCTGTGGACAATCAC...TTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCTGCACTTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR TCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACGTGATTGTCCACAGGTaGGACATGGGGCTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHVIVHR*DMGLRL Trigger: GAGCCTCAGCCCCATGTCTCACCTGTGGACAATCAC...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR GCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCGTTCCTCATTTTCAATaGCTTGTATCCTGTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: STLASACLPSVSPQALLAVPHFQ*LVSCEN Trigger: GTTTTCACAGGATACAAGGCATTGAAAATGAGGAAC...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTCTTCACTGTCAGCTGATTGGCACTTaGAACAGTCTCTGGACAACC | + |
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Preference number: 2 (lower is better) Translates to: TTPLLLNCSSEELQGLHCQLIGT*NSLWTT Trigger: GGTTGTCCAGAGACTGTTCCAAGTGCCAATCAGCTG...ACAGTGAAGACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGCCATCGTGCCTGGTaGGTTAGAGGACAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AEAHGPINHGVLVSCKRRSHRAW*VRGQQE Trigger: CTCCTGTTGTCCTCTAACGCACCAGGCACGATGGCT...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR GCA 90 bp | CATCATTTCTCCACTCACCTGTTTCTGAACTTAGGTTGCTTCCTCTTTATGGTGTGCCACCTGCACGCCTaGCACACAGCCTCGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: HHFSTHLFLNLGCFLFMVCHLHA*HTASPA Trigger: AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCA...CACCATAAAGAGGAAGCAACCTAAGTTCAGAAACAGGTGAGTGGAGAAATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGCCACGCCCCTGCTTCTaGACTGCAGTTCTGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLPRPCF*TAVLRN Trigger: GTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGG...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CAA 90 bp | GCGAAGGCTGAGCACTCGGTTGGGAGGCCAGTTCTGCAGGACTTTTaGAACAAAGTAATTTTCTCAAACTGGCTGAATTCACCCGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AKAEHSVGRPVLQDF*NKVIFSNWLNSPVV Trigger: CACCACGGGTGAATTCAGCCAGTTTGAGAAAATTACTTTGTTCAAAAAGTCCTGCAGAACTGGCCTCCCAACCGAGTGCTCAGCCTTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTAGCCATCGTGCCTGGTaGGTTAGAGGACAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSSHRAW*VRGQQE Trigger: CTCCTGTTGTCCTCTAACGCACCAGGCACGATGGCT...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATGGAAGAGCAGCACACTaGCGTCTGCATGCCTGCCGT | + |
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Preference number: 2 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNGRAAH*RLHACR Trigger: ACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTTCC...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGCCTGCTGCAGCTGATTaGCACTTGGAACAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLPAAAD*HLEQSL Trigger: CAGAGACTGTTCCAAGTGCCAATCAGCTGCAGCAGG...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATGTGATTGTCCACAGGTaGGACATGGGGCTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNVIVHR*DMGLRL Trigger: GAGCCTCAGCCCCATGTCTCACCTGTGGACAATCAC...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGCAGCTGATTGGCACTTaGAACAGTCTCTGGACAACC | + |
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Preference number: 2 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLQLIGT*NSLWTT Trigger: GGTTGTCCAGAGACTGTTCCAAGTGCCAATCAGCTG...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATAATAGGAACTCTGGAAGAGCAGCACACTaGCGTCTGCATGCCTGCCGT | + |
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Preference number: 2 (lower is better) Translates to: RGEEGDLIKRVSLNNRNSGRAAH*RLHACR Trigger: ACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTTCC...AGAGTTCCTATTATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR CAA 90 bp | TTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATaGCTGGTTTCAACAAAGTCCCCACTTTCTCATCAGTACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LKAQRWSVSSRVYRP*LVSTKSPLSHQYSG Trigger: TCCTGAGTACTGATGAGAAAGTGGGGACTTTGTTGAAACCAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGATGCCTTGTATCCTGTaGAAACTGAACCATAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: THTKASPSWNKFPEAYPKMPCIL*KLNHKF Trigger: AAACTTATGGTTCAGTTTTCACAGGATACAAGGCAT...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGTGGGATGAATTGGCTGTGGATATTTTTCTAATGCACATGCCATCATTTAGGCCAGGCTGTCTTTaGACTCAGAGAGATTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VEWDELAVDIFLMHMPSFRPGCL*TQRDSA Trigger: AGCAGAATCTCTCTGAGTTCAAAGACAGCCTGGCCT...AAATGATGGCATGTGCATTAGAAAAATATCCACAGCCAATTCATCCCACTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | TCCCCACTTTCTCATCAGTACTCAGGATATAGGCAGGCTGATGCATATGTTAGCTCTTTTGCCTGTTTTTaGGATGGGATCTTTCTATGT | + |
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Preference number: 2 (lower is better) Translates to: SPLSHQYSGYRQADAYVSSFACF*DGIFLC Trigger: ACATAGAAAGATCCCATCTCAAAAACAGGCAAAAGA...GCTAACATATGCATCAGCCTGCCTATATCCTGAGTACTGATGAGAAAGTGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CAA 90 bp | ATGCACATGCCATCATTTCTCCACTCACCTGTTTCTGAACTTAGGTaGCTTCCTCTTTATGGTGATTACAAACAATCCTGTTATGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MHMPSFLHSPVSELR*LPLYGDYKQSCYEH Trigger: GTGCTCATAACAGGATTGTTTGTAATCACCATAAAGAGGAAGCAACCTAAGTTCAGAAACAGGTGAGTGGAGAAATGATGGCATGTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATATGCCTTGTATCCTGTaGAAACTGAACCATAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNMPCIL*KLNHKF Trigger: AAACTTATGGTTCAGTTTTCACAGGATACAAGGCAT...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CCA 90 bp | AATGTATTACATTGCTGTGCAACACACCCATTAAATACTAACTCCAAGTGTCTCTTCATCCATGTTGAGTaGGATGAATTGGCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NVLHCCATHPLNTNSKCLFIHVE*DELAVD Trigger: ATCCACAGCCAATTCATCCCACTCAACATGGATGAA...GAGACACTTGGAGTTAGTATTTAATGGGTGTGTTGCACAGCAATGTAATACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGTGGGATGAATTGGCTGTGGATATTTTTCTAATGCACATGCCATCATTTTTGCTAAAATCCTTGTaGTGGACACAGCTCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: VEWDELAVDIFLMHMPSFLLKSL*WTQLIL Trigger: TAAAATGAGCTGTGTCCATCACAAGGATTTTAGCAA...AAATGATGGCATGTGCATTAGAAAAATATCCACAGCCAATTCATCCCACTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR-3UTR GCA 90 bp | AAACATTCCACCCCTGTCTTCATTTCATATCCAGAAACAGATGATAGGAAATTGGTTCCTCATTTTCAATaGCTTGTATCCTGTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KHSTPVFISYPETDDRKLVPHFQ*LVSCEN Trigger: GTTTTCACAGGATACAAGGCATTGAAAATGAGGAAC...CAATTTCCTATCATCTGTTTCTGGATATGAAATGAAGACAGGGGTGGAATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR GCA 72 bp | GCAGTCCACACATCGGAAGAGCAGCACACTGGCGTCTaGATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AVHTSEEQHTGV*MPAVCKPTGSA Trigger: AGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTTCCGATGTGTGGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR TCA 72 bp | GGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTaGGCACTCGGTTGGGAGGCCAGTTCTGCAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: GQPAVTEEKGEG*ALGWEASSAGL Trigger: AAGTCCTGCAGAACTGGCCTCCCAACCGAGTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR TCA 72 bp | GGCACTTGGAACAGTCTCTGGACAACCTGCAGTCACTaGGGAAAAGGGCGAAGGCTGAGCACTCGGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GTWNSLWTTCSH*GKGRRLSTRLG Trigger: TCCCAACCGAGTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTCCAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR GCA 72 bp | GTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGGTaGGTTAGAGGACAACAGGAGCCAAGGGAAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VNVGVIISHRAW*VRGQQEPREAW Trigger: CCAGGCTTCCCTTGGCTCCTGTTGTCCTCTAACGCACCAGGCACGATGGCTGATTATAACTCCGACGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR CCA 72 bp | GCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTaGTGCGTTAGAGGACAACAGGAGCCAAGGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: AVNVGVIISHRA*CVRGQQEPREA Trigger: GGCTTCCCTTGGCTCCTGTTGTCCTCTAACGCACCAGGCACGATGGCTGATTATAACTCCGACGTTTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR GCA 72 bp | GCCAGGCTGTCTTTGAACTCAGAGAGATTCTGCTGCTaGTGCCTCCTAAGTGCTAGGACCAAAGATATGGGC | + |
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Preference number: 3 (lower is better) Translates to: ARLSLNSERFCC*CLLSARTKDMG Trigger: GCCCATATCTTTGGTCCTAGCACTTAGGAGGCAGCAGCAGCAGAATCTCTCTGAGTTCAAAGACAGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR GCA 72 bp | AGGCTGTCTTTGAACTCAGAGAGATTCTGCTGCTGCTaGCTCCTAAGTGCTAGGACCAAAGATATGGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: RLSLNSERFCCC*LLSARTKDMGL Trigger: TAGGCCCATATCTTTGGTCCTAGCACTTAGGAGGCAGCAGCAGCAGAATCTCTCTGAGTTCAAAGACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CCA 72 bp | TTCACTGTAACAACACACACCAAAGCCTCACCATCCTaGAACAAATTCCCCGAAGCTTATCCCAAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: FTVTTHTKASPS*NKFPEAYPKGA Trigger: GGCTCCCTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGTTGTTACAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| 3UTR-3UTR CAA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACGGTGAGGAGGGGGATTaGATAAAAAGAGTTTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHGEEGD*IKRVSL Trigger: TAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACC...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGTGGGATGAATTGGCTGTGGATATTTTTCTAATGCACATGCCATCATTTAGGCTGAGCACTCGGTaGGGAGGCCAGTTCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: VEWDELAVDIFLMHMPSFRLSTR*GGQFCR Trigger: CCTGCAGAACTGGCCTCCCAACCGAGTGCTCAGCCT...AAATGATGGCATGTGCATTAGAAAAATATCCACAGCCAATTCATCCCACTCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CCA 72 bp | GGGTTAACACTGCTGATCTTCTTAAAGGCCCAGAGATaGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GLTLLIFLKAQR*SVSSRVYRPLL Trigger: CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAAGATCAGCAGTGTTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR GCA 72 bp | AGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTaGTGGTTTCAACAAAGTCCCCACTTTCTCATCAGT | + |
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Preference number: 3 (lower is better) Translates to: RDGVFPHVFIGH*WFQQSPHFLIS Trigger: ACTGATGAGAAAGTGGGGACTTTGTTGAAACCAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| 3UTR CCA 72 bp | GATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTaGTTTCAACAAAGTCCCCACTTTCTCATCAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: DGVFPHVFIGHC*FQQSPHFLIST Trigger: AGTACTGATGAGAAAGTGGGGACTTTGTTGAAACCAGCAATGGCCTATAAACACGTGAGGAAACACTCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| 3UTR TCA 72 bp | AGTGGGAATGGAACCCAGGGACTCACACTGGTGCTCTaGCTAAGCTATAAAACTAGCCTAAAAGAATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGNGTQGLTLVL*LSYKTSLKEFL Trigger: AAGAAATTCTTTTAGGCTAGTTTTATAGCTTAGTCAGAGCACCAGTGTGAGTCCCTGGGTTCCATTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACGTCCTCCTGCTTGGCTaGGGCCAGGATGAACTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSVSPQALLACHLHACHVLLLG*GQDELR Trigger: CCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGAC...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTCTGTATAGGCCACTTTaGCCAGCTCAAAGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQALLACHLHACHTASPALYRPL*PAQSSP Trigger: AGGACTGCTTTGAGCTGGGCAAAGTGGCCTATACAG...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGTCCCACTCGTCCTCCTaGTTGGCTGGGGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSTLASACLPSVSPQALSHSSS*LAGARM Trigger: CATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGA...CAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCGTCCTCCTGCTTGGCTaGGGCCAGGATGAACTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: STLASACLPSVSPQALLAVLLLG*GQDELR Trigger: CCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGAC...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACTTTGGTGCAGTTTTCTaGTCAGATTGGTCGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVCKPTGSARLPPARLPHFGAVF*SDWSPD Trigger: GTCGGGCGACCAATCTGATCAGAAAACTGCACCAAA...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTCCAATTCTGACAGGGTaGACGGCCTTCGAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQALLACHLHACHTASPAPILTG*TAFEIL Trigger: AAGAATTTCGAAGGCCGTGCACCCTGTCAGAATTGG...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACTTACTGGGTTTGAAATaGTGGCTCGCCTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVCKPTGSARLPPARLPHLLGLK*WLASAL Trigger: CAAGGCTGAGGCGAGCCACCATTTCAAACCCAGTAA...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGGATGGGCTAAAGACTaGGGAAGTAGAATCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLGWAKD*GSRIAI Trigger: GATGGCGATTCTACTTCCTCAGTCTTTAGCCCATCC...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTTTAGCAGCTCCAACCTaGTCTTCATCATTAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQALLACHLHACHTASPALAAPT*SSSLGK Trigger: CTTCCCTAATGATGAAGATCAGGTTGGAGCTGCTAA...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACCGGCTCATCTTTCCTTaGAAAGTCAAAATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSVSPQALLACHLHACHRLIFP*KVKMGL Trigger: GAGCCCCATTTTGACTTTGCAAGGAAAGATGAGCCG...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACCCAATTCTGACAGGGTaGACGGCCTTCGAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVSPQALLACHLHACHPILTG*TAFEIL Trigger: AAGAATTTCGAAGGCCGTGCACCCTGTCAGAATTGG...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCCTCTGTACTGTGCTGTaGTCAATTTCCCCGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLLCTVL*SISPSQ Trigger: CTGAGACGGGGAAATTGACCACAGCACAGTACAGAG...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACTTAGCAGCTCCAACCTaGTCTTCATCATTAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSVSPQALLACHLHACHLAAPT*SSSLGK Trigger: CTTCCCTAATGATGAAGATCAGGTTGGAGCTGCTAA...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTGTTTTGCTAAGTCTTTaGCAATCTCAATCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PQALLACHLHACHTASPAVLLSL*QSQSPR Trigger: ACGCGGAGATTGAGATTGTCAAAGACTTAGCAAAAC...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCCGGCTCATCTTTCCTTaGAAAGTCAAAATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSPQALLACHLHACHTARLIFP*KVKMGL Trigger: GAGCCCCATTTTGACTTTGCAAGGAAAGATGAGCCG...GGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACAGATACTCTGTACTGTaGTGTGGTCAATTTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVSPQALLACHLHACHRYSVL*CGQFPR Trigger: ACGGGGAAATTGACCACAGCACAGTACAGAGTATCT...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCTCAGAGATGATGTCATaGAAACGGATAATCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLSEMMS*KRIIRG Trigger: GCCCCGGATTATCCGTTTCCATGACATCATCTCTGA...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACTCTTGTCCACGTTCATaGAGCCATTTGTTGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: AVCKPTGSARLPPARLPHSCPRS*SHLLDT Trigger: GGTATCCAACAAATGGCTCCATGAACGTGGACAAGA...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCCTCTGTACTGTGCTGTaGTCAATTTCCCCGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STLASACLPSVSPQALLALCTVL*SISPSQ Trigger: CTGAGACGGGGAAATTGACCACAGCACAGTACAGAG...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCCATCCGACATGTCCTTaGGGATCAGATTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: STLASACLPSVSPQALLAHPTCP*GSDSPT Trigger: AGTTGGAGAATCTGATCCTCAAGGACATGTCGGATG...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAATCTCCTTCCCCACTaGCAAACAGATTATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVCKPTGSARLPPARLPHNLLPH*QTDYTR Trigger: TCTGGTATAATCTGTTTGCCAGTGGGGAAGGAGATT...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTTAGCAGCTCCAACCTaGTCTTCATCATTAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLASACLPSVSPQALLALAAPT*SSSLGK Trigger: CTTCCCTAATGATGAAGATCAGGTTGGAGCTGCTAA...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCTTACCATTAGCTCTCTaGTGTTCAGGATCTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLLPLAL*CSGSSS Trigger: TGAGCTAGATCCTGAACATCAGAGAGCTAATGGTAA...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTGTATAGGCCACTTTaGCCAGCTCAAAGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSTLASACLPSVSPQALLYRPL*PAQSSP Trigger: AGGACTGCTTTGAGCTGGGCAAAGTGGCCTATACAG...CAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACGTCCTCCTGCTTGGCTaGGGCCAGGATGAACTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHVLLLG*GQDELR Trigger: CCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGAC...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTCATCCGACATGTCCTTaGGGATCAGATTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RAETTPLLLNCSSEELQGHPTCP*GSDSPT Trigger: AGTTGGAGAATCTGATCCTCAAGGACATGTCGGATG...ACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCTGTGTGGTAATAATCTaGCTCTGTATAGGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLCVVII*LCIGHF Trigger: AAAGTGGCCTATACAGAGGCAGATTATTACCACACA...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGTCCCACTCGTCCTCCTaGTTGGCTGGGGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: THTKASPSWNKFPEAYPKSHSSS*LAGARM Trigger: CATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGA...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCCCAACAAACCCCTCTaGGTCTTTTGTTGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSTLASACLPSVSPQALPNKPL*VFCCCT Trigger: AGTACAGCAACAAAAGACCCAGAGGGGTTTGTTGGG...CAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTTCAGAGATGATGTCATaGAAACGGATAATCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAETTPLLLNCSSEELQGSEMMS*KRIIRG Trigger: GCCCCGGATTATCCGTTTCCATGACATCATCTCTGA...ACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCAATCTCCTTCCCCACTaGCAAACAGATTATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STLASACLPSVSPQALLANLLPH*QTDYTR Trigger: TCTGGTATAATCTGTTTGCCAGTGGGGAAGGAGATT...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCCATGGAGCCATTTGTTaGATACCCATTTGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CKPTGSARLPPARLPHSLHGAIC*IPICFQ Trigger: TTGGAAACAAATGGGTATCCAACAAATGGCTCCATG...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCAAACATCCAGTCCTGTaGGATCTTGTATTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSPQALLACHLHACHTAKHPVL*DLVFSY Trigger: ATATGAGAATACAAGATCTCACAGGACTGGATGTTT...GGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGTCCCACTCGTCCTCCTaGTTGGCTGGGGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HGVLVSCKRRSYNQPSCLSHSSS*LAGARM Trigger: CATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGA...CAGGCACGATGGCTGATTATAACTCCGACGTTTACAGCTGACTAACACTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGGTACTTCTGTCTCTCTaGCAGGTAATCCACAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSTLASACLPSVSPQALVLLSL*QVIHSY Trigger: ATAGCTGTGGATTACCTGCCAGAGAGACAGAAGTAC...CAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTGCAGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAAGGGAAGTACTGCCTCTaGATGGTTAGGTTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IKCRAETTPLLLNCSSEEGKYCL*MVRLEM Trigger: CATCTCTAACCTAACCATTCAGAGGCAGTACTTCCC...TTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCTGCACTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | ACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTCTTCACTGTTTTGGTGCAGTTTTCTaGTCAGATTGGTCGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTPLLLNCSSEELQGLHCFGAVF*SDWSPD Trigger: GTCGGGCGACCAATCTGATCAGAAAACTGCACCAAA...ACAGTGAAGACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACGGGAAGTACTGCCTCTaGATGGTTAGGTTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHGKYCL*MVRLEM Trigger: CATCTCTAACCTAACCATTCAGAGGCAGTACTTCCC...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHWKIPL*DGICVQ Trigger: CTGGACACAAATACCATCTCAAAGGGGAATCTTCCA...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTCTCCCTCCTCCAGCTaGGTCAGAGCCTGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSSPSSS*VRACSI Trigger: GATGGAGCAGGCTCTGACGCAGCTGGAGGAGGGAGA...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACGTACTTCTGTCTCTCTaGCAGGTAATCCACAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHVLLSL*QVIHSY Trigger: ATAGCTGTGGATTACCTGCCAGAGAGACAGAAGTAC...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACTCTTGTCCACGTTCATaGAGCCATTTGTTGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHSCPRS*SHLLDT Trigger: GGTATCCAACAAATGGCTCCATGAACGTGGACAAGA...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGGGATGGGCTAAAGACTaGGGAAGTAGAATCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AEAHGPINHGVLVSCKRRGWAKD*GSRIAI Trigger: GATGGCGATTCTACTTCCTCAGTCTTTAGCCCATCC...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGCAAGAAGCTTCTTGGTaGGGAGAAGCGCCTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEAHGPINHGVLVSCKRRQEASW*GEAPYP Trigger: TGGATAAGGCGCTTCTCCTCACCAAGAAGCTTCTTG...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | ATCAAGTGCAGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACCGACGCTGACTTATTaGCATCTTTTTCTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKCRAETTPLLLNCSSEEPTLTY*HLFLYS Trigger: TGAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGG...TTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCTGCACTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGTCCTGTTACTGGGTTTaGAATGGTGGCTCGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLSCYWV*NGGSPQ Trigger: CTGAGGCGAGCCACCATTTCAAACCCAGTAACAGGA...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGTCAGAGATGATGTCATaGAAACGGATAATCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEAHGPINHGVLVSCKRRSEMMS*KRIIRG Trigger: GCCCCGGATTATCCGTTTCCATGACATCATCTCTGA...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCACTTTCTCATCAGTACTCAGGATATAGGCAGGCTGATGCATATGTTAGCCTGGGTTTGAAATGGTaGCTCGCCTCAGCCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSHQYSGYRQADAYVSLGLKW*LASALV Trigger: AACCAAGGCTGAGGCGAGCCACCATTTCAAACCCAG...GCTAACATATGCATCAGCCTGCCTATATCCTGAGTACTGATGAGAAAGTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGGGATGGGCTAAAGACTaGGGAAGTAGAATCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLGWAKD*GSRIAI Trigger: GATGGCGATTCTACTTCCTCAGTCTTTAGCCCATCC...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTKASPSWNKFPEAYPKWKIPL*DGICVQ Trigger: CTGGACACAAATACCATCTCAAAGGGGAATCTTCCA...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGGTACTTCTGTCTCTCTaGCAGGTAATCCACAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: THTKASPSWNKFPEAYPKVLLSL*QVIHSY Trigger: ATAGCTGTGGATTACCTGCCAGAGAGACAGAAGTAC...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGCTTGCAAAGTCAAAATaGGGCTCATACTGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: THTKASPSWNKFPEAYPKLAKSK*GSYCPP Trigger: TGGAGGACAGTATGAGCCCCATTTTGACTTTGCAAG...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGGACGTTTCATTAACTTaGATGCGTTTACAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEAHGPINHGVLVSCKRRDVSLT*MRLQDA Trigger: GGCATCCTGTAAACGCATTCAAGTTAATGAAACGTC...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGCATCCGACATGTCCTTaGGGATCAGATTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLHPTCP*GSDSPT Trigger: AGTTGGAGAATCTGATCCTCAAGGACATGTCGGATG...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | GCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATGGGAAGTACTGCCTCTaGATGGTTAGGTTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AHGPINHGVLVSCKRRSYGKYCL*MVRLEM Trigger: CATCTCTAACCTAACCATTCAGAGGCAGTACTTCCC...ATAACTCCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGTGTGTGGTAATAATCTaGCTCTGTATAGGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AEAHGPINHGVLVSCKRRCVVII*LCIGHF Trigger: AAAGTGGCCTATACAGAGGCAGATTATTACCACACA...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | GCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATCCAATTCTGACAGGGTaGACGGCCTTCGAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHGPINHGVLVSCKRRSYPILTG*TAFEIL Trigger: AAGAATTTCGAAGGCCGTGCACCCTGTCAGAATTGG...ATAACTCCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTCCCAACAAACCCCTCTaGGTCTTTTGTTGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSPNKPL*VFCCCT Trigger: AGTACAGCAACAAAAGACCCAGAGGGGTTTGTTGGG...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGAATCTCCTTCCCCACTaGCAAACAGATTATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGVLVSCKRRSYNQPSCLNLLPH*QTDYTR Trigger: TCTGGTATAATCTGTTTGCCAGTGGGGAAGGAGATT...CAGGCACGATGGCTGATTATAACTCCGACGTTTACAGCTGACTAACACTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| 3UTR CAA 72 bp | CAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATaGCTGGTTTCAACAAAGTCCCCACTTTCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRWSVSSRVYRP*LVSTKSPLSHQ Trigger: CTGATGAGAAAGTGGGGACTTTGTTGAAACCAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | GCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHGPINHGVLVSCKRRSYWKIPL*DGICVQ Trigger: CTGGACACAAATACCATCTCAAAGGGGAATCTTCCA...ATAACTCCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTAAAGGCCCAGAGATGGAGTGTTTCCTCACGTGTTTATAGGCCATTGCTGTTACCATTAGCTCTCTaGTGTTCAGGATCTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLKAQRWSVSSRVYRPLLLPLAL*CSGSSS Trigger: TGAGCTAGATCCTGAACATCAGAGAGCTAATGGTAA...CAGCAATGGCCTATAAACACGTGAGGAAACACTCCATCTCTGGGCCTTTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR GCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTAGATACTCTGTACTGTaGTGTGGTCAATTTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSRYSVL*CGQFPR Trigger: ACGGGGAAATTGACCACAGCACAGTACAGAGTATCT...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTCTTGCAAAGTCAAAATaGGGCTCATACTGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSLAKSK*GSYCPP Trigger: TGGAGGACAGTATGAGCCCCATTTTGACTTTGCAAG...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGCATGGAGCCATTTGTTaGATACCCATTTGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGVLVSCKRRSYNQPSCLHGAIC*IPICFQ Trigger: TTGGAAACAAATGGGTATCCAACAAATGGCTCCATG...CAGGCACGATGGCTGATTATAACTCCGACGTTTACAGCTGACTAACACTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| 3UTR CAA 72 bp | CCTGTAAGTGGGTTCATCCATGTTGAGTGGGATGAATaGGCTGTGGATATTTTTCTAATGCACATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSGFIHVEWDE*AVDIFLMHMPS Trigger: TGATGGCATGTGCATTAGAAAAATATCCACAGCCAATTCATCCCACTCAACATGGATGAACCCACTTACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CCA 90 bp | GCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATCCGACGCTGACTTATTaGCATCTTTTTCTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHGPINHGVLVSCKRRSYPTLTY*HLFLYS Trigger: TGAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGG...ATAACTCCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTCATGGAGCCATTTGTTaGATACCCATTTGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSHGAIC*IPICFQ Trigger: TTGGAAACAAATGGGTATCCAACAAATGGCTCCATG...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATGTTTTGCTAAGTCTTTaGCAATCTCAATCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNVLLSL*QSQSPR Trigger: ACGCGGAGATTGAGATTGTCAAAGACTTAGCAAAAC...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTAAACATCCAGTCCTGTaGGATCTTGTATTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSKHPVL*DLVFSY Trigger: ATATGAGAATACAAGATCTCACAGGACTGGATGTTT...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR GCA 90 bp | AATGTATTACATTGCTGTGCAACACACCCATTAAATACTAACTCCAAGTGTCTCCGGCTCATCTTTCCTTaGAAAGTCAAAATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVLHCCATHPLNTNSKCLRLIFP*KVKMGL Trigger: GAGCCCCATTTTGACTTTGCAAGGAAAGATGAGCCG...GAGACACTTGGAGTTAGTATTTAATGGGTGTGTTGCACAGCAATGTAATACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CCA 90 bp | CGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATAATAGGAACTCTCTTGCAAAGTCAAAATaGGGCTCATACTGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEEGDLIKRVSLNNRNSLAKSK*GSYCPP Trigger: TGGAGGACAGTATGAGCCCCATTTTGACTTTGCAAG...AGAGTTCCTATTATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| 3UTR CAA 72 bp | CCATCATTTCTCCACTCACCTGTTTCTGAACTTAGGTaGCTTCCTCTTTATGGTGATTACAAACAATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFLHSPVSELR*LPLYGDYKQSC Trigger: ACAGGATTGTTTGTAATCACCATAAAGAGGAAGCAACCTAAGTTCAGAAACAGGTGAGTGGAGAAATGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | AAACATTCCACCCCTGTCTTCATTTCATATCCAGAAACAGATGATAGGAAATTGGACGTTTCATTAACTTaGATGCGTTTACAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHSTPVFISYPETDDRKLDVSLT*MRLQDA Trigger: GGCATCCTGTAAACGCATTCAAGTTAATGAAACGTC...CAATTTCCTATCATCTGTTTCTGGATATGAAATGAAGACAGGGGTGGAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR TCA 90 bp | CGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATAATAGGAACTCTGTTTTGCTAAGTCTTTaGCAATCTCAATCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGEEGDLIKRVSLNNRNSVLLSL*QSQSPR Trigger: ACGCGGAGATTGAGATTGTCAAAGACTTAGCAAAAC...AGAGTTCCTATTATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| 3UTR CAA 72 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTaGATAAAAAGAGTTTCTTTAAATAATAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLAEFTRGEEGD*IKRVSLNNRNS Trigger: AGAGTTCCTATTATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CCA 90 bp | CGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATAATAGGAACTCTCCGACGCTGACTTATTaGCATCTTTTTCTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEEGDLIKRVSLNNRNSPTLTY*HLFLYS Trigger: TGAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGG...AGAGTTCCTATTATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR TCA 90 bp | AAACATTCCACCCCTGTCTTCATTTCATATCCAGAAACAGATGATAGGAAATTGAAACATCCAGTCCTGTaGGATCTTGTATTCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: KHSTPVFISYPETDDRKLKHPVL*DLVFSY Trigger: ATATGAGAATACAAGATCTCACAGGACTGGATGTTT...CAATTTCCTATCATCTGTTTCTGGATATGAAATGAAGACAGGGGTGGAATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACCTCCGGGGAGTCATTTaGATACCCTCCCCACGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVCKPTGSARLPPARLPHLRGVI*IPSPRH Trigger: GTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAG...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCCTCCGGGGAGTCATTTaGATACCCTCCCCACGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CKPTGSARLPPARLPHSLLRGVI*IPSPRH Trigger: GTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAG...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTACAGCAGTGCCTTTTTaGGGCCAAACACTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PQALLACHLHACHTASPATAVPF*GQTLAP Trigger: GGGAGCCAGTGTTTGGCCCAAAAAAGGCACTGCTGT...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCAGTGCCTTTTTaGGGCCAAACACTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVSPQALLACHLHACHTAVPF*GQTLAP Trigger: GGGAGCCAGTGTTTGGCCCAAAAAAGGCACTGCTGT...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTCGGCCTTCGAAATTCTaGTCCACGTTCATGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQALLACHLHACHTASPARPSKF*STFMEP Trigger: TGGCTCCATGAACGTGGACAAGAATTTCGAAGGCCG...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACACCCCTCTGGGTCTTTaGTTGCTGTACTCGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVCKPTGSARLPPARLPHTPLGL*LLYSLA Trigger: GGCTAACGAGTACAGCAACAAAAGACCCAGAGGGGT...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCACCCCTCTGGGTCTTTaGTTGCTGTACTCGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CKPTGSARLPPARLPHSLTPLGL*LLYSLA Trigger: GGCTAACGAGTACAGCAACAAAAGACCCAGAGGGGT...GAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACCCATCCGACATGTCCTaGAGGATCAGATTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVSPQALLACHLHACHPSDMS*RIRFSN Trigger: GTTGGAGAATCTGATCCTCAAGGACATGTCGGATGG...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACCCATCCGACATGTCCTaGAGGATCAGATTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVCKPTGSARLPPARLPHPSDMS*RIRFSN Trigger: GTTGGAGAATCTGATCCTCAAGGACATGTCGGATGG...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCCGGCCTTCGAAATTCTaGTCCACGTTCATGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSPQALLACHLHACHTARPSKF*STFMEP Trigger: TGGCTCCATGAACGTGGACAAGAATTTCGAAGGCCG...GGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCCCTCTGGGTCTTTTGTaGCTGTACTCGTTAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: STLASACLPSVSPQALLAPLGLL*LYSLAG Trigger: ACCGGCTAACGAGTACAGCAACAAAAGACCCAGAGG...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCAGCTCAAGAAGCTTCTaGGTGAGGAGAAGCGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SVSPQALLACHLHACHTASSRSF*VRRSAL Trigger: TAAGGCGCTTCTCCTCACCAAGAAGCTTCTTGAGCT...GGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCCCATCCGACATGTCCTaGAGGATCAGATTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STLASACLPSVSPQALLAPSDMS*RIRFSN Trigger: GTTGGAGAATCTGATCCTCAAGGACATGTCGGATGG...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACCTGGAAGATTCCCCTTaGAGATGGTATTTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSVSPQALLACHLHACHLEDSP*RWYLCP Trigger: TGGACACAAATACCATCTCAAAGGGGAATCTTCCAG...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACCCCGACGCTGACTTATaGGCATCTTTTTCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVSPQALLACHLHACHPDADL*ASFSLL Trigger: GAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGGG...GTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS CCA 90 bp | GAAACGGATAATCCGGGGCTTGTCCCACTCGTCCTCCTGCTTGGCTaGGGCCAGGATGAACTTAGGATTCCGGTTCCCATCATGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ETDNPGLVPLVLLLG*GQDELRIPVPIMVA Trigger: CGCTACCATGATGGGAACCGGAATCCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGACAAGCCCCGGATTATCCGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACCCTTTGAGATGGTATTaGTGTCCAGATTGTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVCKPTGSARLPPARLPHPLRWY*CPDCRC Trigger: ACACCTACAATCTGGACACAAATACCATCTCAAAGG...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGTAAGCCCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACTTCTCTGCCCATTTTTaGATTTGCTCTAACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVCKPTGSARLPPARLPHFSAHF*ICSNLS Trigger: GGACAAGTTAGAGCAAATCAAAAAATGGGCAGAGAA...GTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGGGCTTACAGACGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | AGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCTCGCCCCCGACGCTGACTTATaGGCATCTTTTTCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: STLASACLPSVSPQALLAPDADL*ASFSLL Trigger: GAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGGG...GGCGAGCAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCTCTGCTCGCCTGCCACCTGCACGCCTGCCACACAGCCTCGCCTGCTCAGTCCTGTGAGATCTaGTATTCTCATATTAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQALLACHLHACHTASPAQSCEI*YSHINS Trigger: CGAATTAATATGAGAATACAAGATCTCACAGGACTG...AGCAGGCGAGGCTGTGTGGCAGGCGTGCAGGTGGCAGGCGAGCAGAGCCTGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS GCA 90 bp | ATGTCATGGAAACGGATAATCCGGGGCTTGTCCCACTCGTCCTCCTaGTTGGCTGGGGCCAGGATGAACTTAGGATTCCGGTTCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: MSWKRIIRGLSHSSS*LAGARMNLGFRFPS Trigger: TGATGGGAACCGGAATCCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGACAAGCCCCGGATTATCCGTTTCCATGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS-3UTR CAA 90 bp | ATCAAGTGCAGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACCTCTGGGTCTTTTGTaGCTGTACTCGTTAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: IKCRAETTPLLLNCSSEEPLGLL*LYSLAG Trigger: ACCGGCTAACGAGTACAGCAACAAAAGACCCAGAGG...TTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCTGCACTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGCTCCGGGGAGTCATTTaGATACCCTCCCCACGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AEAHGPINHGVLVSCKRRLRGVI*IPSPRH Trigger: GTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAG...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCACACTGGCGTCTGCATGCCTGCCGTCTGTAAGCCCACAGGCTCTGCCTTTGAGATGGTATTaGTGTCCAGATTGTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSSTLASACLPSVSPQALPLRWY*CPDCRC Trigger: ACACCTACAATCTGGACACAAATACCATCTCAAAGG...CAGAGCCTGTGGGCTTACAGACGGCAGGCATGCAGACGCCAGTGTGCTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCCGAGACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTCGTTCATGGAGCCATTaGTTGGATACCCATTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAETTPLLLNCSSEELQGRSWSH*LDTHLF Trigger: AAACAAATGGGTATCCAACAAATGGCTCCATGAACG...ACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGTCTCGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS GCA 90 bp | GTCTTCGTAGCCAGACAGCCAAGCACTCTTAGATACTCTGTACTGTaGTGTGGTCAATTTCCCCGTCTCAGGGTCATGTACTGTAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFVARQPSTLRYSVL*CGQFPRLRVMYCSS Trigger: CGAGCTACAGTACATGACCCTGAGACGGGGAAATTGACCACAGCACAGTACAGAGTATCTAAGAGTGCTTGGCTGTCTGGCTACGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACCTGGAAGATTCCCCTTaGAGATGGTATTTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHLEDSP*RWYLCP Trigger: TGGACACAAATACCATCTCAAAGGGGAATCTTCCAG...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS-3UTR CAA 90 bp | ACCACGCCCCTGCTTCTGAACTGCAGTTCTGAGGAACTGCAGGGTCTTCACTGTCCCGACGCTGACTTATaGGCATCTTTTTCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: TTPLLLNCSSEELQGLHCPDADL*ASFSLL Trigger: GAGTAAAGAAAAAGATGCCAATAAGTCAGCGTCGGG...ACAGTGAAGACCCTGCAGTTCCTCAGAACTGCAGTTCAGAAGCAGGGGCGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGCTCCTGTTACTGGGTTaGAAATGGTGGCTCGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AEAHGPINHGVLVSCKRRLLLLG*KWWLAS Trigger: TGAGGCGAGCCACCATTTCAAACCCAGTAACAGGAG...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
||
| CDS-3UTR CAA 90 bp | GAACAGTCTCTGGACAACCTGCAGTCACTGAGGAAAAGGGCGAAGGCTGAGCACTTCTCTGCCCATTTTTaGATTTGCTCTAACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EQSLDNLQSLRKRAKAEHFSAHF*ICSNLS Trigger: GGACAAGTTAGAGCAAATCAAAAAATGGGCAGAGAA...GTGCTCAGCCTTCGCCCTTTTCCTCAGTGACTGCAGGTTGTCCAGAGACTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS GCA 90 bp | TCCACAGTTCTGTGTGGTAATAATCTGCCTCTGTATAGGCCACTTTaGCCAGCTCAAAGCAGTCCTCGGCTGTCAGGAAAGACTTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: STVLCGNNLPLYRPL*PAQSSPRLSGKTYV Trigger: AACATAAGTCTTTCCTGACAGCCGAGGACTGCTTTGAGCTGGGCAAAGTGGCCTATACAGAGGCAGATTATTACCACACAGAACTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS CCA 90 bp | AATTCTGACAGGGTGCACGGCCTTCGAAATTCTTGTCCACGTTCATaGAGCCATTTGTTGGATACCCATTTGTTTCCAACTAGCACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSDRVHGLRNSCPRS*SHLLDTHLFPTSTG Trigger: TCCCGTGCTAGTTGGAAACAAATGGGTATCCAACAAATGGCTCCATGAACGTGGACAAGAATTTCGAAGGCCGTGCACCCTGTCAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS-3UTR CAA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTACCCCTCTGGGTCTTTaGTTGCTGTACTCGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSTPLGL*LLYSLA Trigger: GGCTAACGAGTACAGCAACAAAAGACCCAGAGGGGT...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS-3UTR CAA 90 bp | ACACACACCAAAGCCTCACCATCCTGGAACAAATTCCCCGAAGCTTATCCCAAGCTGGAAGATTCCCCTTaGAGATGGTATTTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: THTKASPSWNKFPEAYPKLEDSP*RWYLCP Trigger: TGGACACAAATACCATCTCAAAGGGGAATCTTCCAG...CTTGGGATAAGCTTCGGGGAATTTGTTCCAGGATGGTGAGGCTTTGGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS TCA 90 bp | GGCTGTCAGGAAAGACTTATGTTGCACTCCTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAGATTGTAGGTGTCTTGCAGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCQERLMLHSWKIPL*DGICVQIVGVLQPK Trigger: TTTCGGCTGCAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGGAGTGCAACATAAGTCTTTCCTGACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGCCTTTGAGATGGTATTaGTGTCCAGATTGTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEAHGPINHGVLVSCKRRPLRWY*CPDCRC Trigger: ACACCTACAATCTGGACACAAATACCATCTCAAAGG...CCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGCCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | AAACTGGCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTAGCTCAAGAAGCTTCTaGGTGAGGAGAAGCGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLAEFTRGEEGDLIKRVSSSRSF*VRRSAL Trigger: TAAGGCGCTTCTCCTCACCAAGAAGCTTCTTGAGCT...AGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGCCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATACAGCAGTGCCTTTTTaGGGCCAAACACTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNTAVPF*GQTLAP Trigger: GGGAGCCAGTGTTTGGCCCAAAAAAGGCACTGCTGT...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS TCA 90 bp | GATTCTCCAACTCACTCCACTCAGTGTTCAGACGTTTCATTAACTTaGATGCGTTTACAGGATGCCCAACAAACCCCTCTGGGTCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSPTHSTQCSDVSLT*MRLQDAQQTPLGLL Trigger: CAAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAACACTGAGTGGAGTGAGTTGGAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS GCA 90 bp | CACTCAGTGTTCAGACGTTTCATTAACTTGAATGCGTTTACAGGATaGCCAACAAACCCCTCTGGGTCTTTTGTTGCTGTACTCGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSVFRRFINLNAFTG*PTNPSGSFVAVLVS Trigger: GCTAACGAGTACAGCAACAAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAACACTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS CCA 90 bp | TCAGGAAAGACTTATGTTGCACTCCTGGAAGATTCCCCTTTGAGATaGTATTTGTGTCCAGATTGTAGGTGTCTTGCAGCCGAAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKTYVALLEDSPLR*YLCPDCRCLAAETE Trigger: CTCTGTTTCGGCTGCAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGGAGTGCAACATAAGTCTTTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | CATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGCGTTCATGGAGCCATTaGTTGGATACCCATTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVLVSCKRRSYNQPSCLRSWSH*LDTHLF Trigger: AAACAAATGGGTATCCAACAAATGGCTCCATGAACG...CAGGCACGATGGCTGATTATAACTCCGACGTTTACAGCTGACTAACACTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATCGGCCTTCGAAATTCTaGTCCACGTTCATGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNRPSKF*STFMEP Trigger: TGGCTCCATGAACGTGGACAAGAATTTCGAAGGCCG...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS TCA 90 bp | GTTACCATTAGCTCTCTGATGTTCAGGATCTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAGATTGTAGGTGTCTTGCAGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTISSLMFRIWKIPL*DGICVQIVGVLQPK Trigger: TTTCGGCTGCAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGATCCTGAACATCAGAGAGCTAATGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092512.11 |
||
| CDS-3UTR CAA 90 bp | CATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATAATCAGCCATCGTGCCTGCAGTCCTGTGAGATCTaGTATTCTCATATTAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: HGVLVSCKRRSYNQPSCLQSCEI*YSHINS Trigger: CGAATTAATATGAGAATACAAGATCTCACAGGACTG...CAGGCACGATGGCTGATTATAACTCCGACGTTTACAGCTGACTAACACTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTCATGGCCCAATTAATCATGGAGTGTTAGTCAGCTGTAAACGTCGGAGTTATCAGTCCTGTGAGATCTaGTATTCTCATATTAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: AHGPINHGVLVSCKRRSYQSCEI*YSHINS Trigger: CGAATTAATATGAGAATACAAGATCTCACAGGACTG...ATAACTCCGACGTTTACAGCTGACTAACACTCCATGATTAATTGGGCCATGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATCGTTCATGGAGCCATTaGTTGGATACCCATTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNRSWSH*LDTHLF Trigger: AAACAAATGGGTATCCAACAAATGGCTCCATGAACG...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAATTCACCCGTGGTGAGGAGGGGGATTTGATAAAAAGAGTTTCTTTAAATTTCTCTGCCCATTTTTaGATTTGCTCTAACTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: AEFTRGEEGDLIKRVSLNFSAHF*ICSNLS Trigger: GGACAAGTTAGAGCAAATCAAAAAATGGGCAGAGAA...ATTTAAAGAAACTCTTTTTATCAAATCCCCCTCCTCACCACGGGTGAATTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CAA 72 bp | CGGATAATCCGGGGCTTGTCCCACTCGTCCTCCTGCTaGGCTGGGGCCAGGATGAACTTAGGATTCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RIIRGLSHSSSC*AGARMNLGFRF Trigger: GAACCGGAATCCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGACAAGCCCCGGATTATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS GCA 72 bp | AAACGGATAATCCGGGGCTTGTCCCACTCGTCCTCCTaGTTGGCTGGGGCCAGGATGAACTTAGGATTCCGG | + |
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Preference number: 6 (lower is better) Translates to: KRIIRGLSHSSS*LAGARMNLGFR Trigger: CCGGAATCCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGACAAGCCCCGGATTATCCGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CAA 90 bp | TCATGGAAACGGATAATCCGGGGCTTGTCCCACTCGTCCTCCTGCTaGGCTGGGGCCAGGATGAACTTAGGATTCCGGTTCCCATCATGG | + |
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Preference number: 6 (lower is better) Translates to: SWKRIIRGLSHSSSC*AGARMNLGFRFPSW Trigger: CCATGATGGGAACCGGAATCCTAAGTTCATCCTGGCCCCAGCCAAGCAGGAGGACGAGTGGGACAAGCCCCGGATTATCCGTTTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS TCA 72 bp | TCTGATGTTCAGGATCTAGCTCAAGAAGCTTCTTGGTaGGGAGAAGCGCCTTATCCAGGTCTCCCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SDVQDLAQEASW*GEAPYPGLPAG Trigger: ACCAGCAGGGAGACCTGGATAAGGCGCTTCTCCTCACCAAGAAGCTTCTTGAGCTAGATCCTGAACATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS GCA 72 bp | CTGTGTGGTAATAATCTGCCTCTGTATAGGCCACTTTaGCCAGCTCAAAGCAGTCCTCGGCTGTCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LCGNNLPLYRPL*PAQSSPRLSGK Trigger: CTTTCCTGACAGCCGAGGACTGCTTTGAGCTGGGCAAAGTGGCCTATACAGAGGCAGATTATTACCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS GCA 72 bp | GCCAGACAGCCAAGCACTCTTAGATACTCTGTACTGTaGTGTGGTCAATTTCCCCGTCTCAGGGTCATGTAC | + |
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Preference number: 6 (lower is better) Translates to: ARQPSTLRYSVL*CGQFPRLRVMY Trigger: GTACATGACCCTGAGACGGGGAAATTGACCACAGCACAGTACAGAGTATCTAAGAGTGCTTGGCTGTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CCA 72 bp | GTACCGTCTCCAAGGCTCCTGTTACTGGGTTTGAAATaGTGGCTCGCCTCAGCCTTGGTTTTGCTAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VPSPRLLLLGLK*WLASALVLLSL Trigger: AAGACTTAGCAAAACCAAGGCTGAGGCGAGCCACCATTTCAAACCCAGTAACAGGAGCCTTGGAGACGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| CDS CAA 72 bp | TTACAGGATGCCCAACAAACCCCTCTGGGTCTTTTGTaGCTGTACTCGTTAGCCGGTCTAACTTCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LQDAQQTPLGLL*LYSLAGLTSLP Trigger: GGGCAGAGAAGTTAGACCGGCTAACGAGTACAGCAACAAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS GCA 72 bp | AGCCTGCTCCATCCACAGTTCTGTGTGGTAATAATCTaGCTCTGTATAGGCCACTTTGCCCAGCTCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLLHPQFCVVII*LCIGHFAQLKA Trigger: TGCTTTGAGCTGGGCAAAGTGGCCTATACAGAGGCAGATTATTACCACACAGAACTGTGGATGGAGCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS CAA 72 bp | CGTTTACAGGATGCCCAACAAACCCCTCTGGGTCTTTaGTTGCTGTACTCGTTAGCCGGTCTAACTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RLQDAQQTPLGL*LLYSLAGLTSL Trigger: CAGAGAAGTTAGACCGGCTAACGAGTACAGCAACAAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CAA 72 bp | TGTAATGTACCGTCTCCAAGGCTCCTGTTACTGGGTTaGAAATGGTGGCTCGCCTCAGCCTTGGTTTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: CNVPSPRLLLLG*KWWLASALVLL Trigger: TAGCAAAACCAAGGCTGAGGCGAGCCACCATTTCAAACCCAGTAACAGGAGCCTTGGAGACGGTACATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009789.15 |
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| CDS CAA 72 bp | ATGGTTAGGTTAGAGATGAAGCCATCCGACATGTCCTaGAGGATCAGATTCTCCAACTCACTCCACTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MVRLEMKPSDMS*RIRFSNSLHSV Trigger: CACTGAGTGGAGTGAGTTGGAGAATCTGATCCTCAAGGACATGTCGGATGGCTTCATCTCTAACCTAACCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CAA 72 bp | CTCCTCGGCCGTAGAAACATCCAGTCCTGTGAGATCTaGTATTCTCATATTAATTCGGGATACCACAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLGRRNIQSCEI*YSHINSGYHRV Trigger: GACCCTGTGGTATCCCGAATTAATATGAGAATACAAGATCTCACAGGACTGGATGTTTCTACGGCCGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CAA 72 bp | GGCCTTCGAAATTCTTGTCCACGTTCATGGAGCCATTaGTTGGATACCCATTTGTTTCCAACTAGCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLRNSCPRSWSH*LDTHLFPTSTG Trigger: TCCCGTGCTAGTTGGAAACAAATGGGTATCCAACAAATGGCTCCATGAACGTGGACAAGAATTTCGAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS TCA 72 bp | ACTCACTCCACTCAGTGTTCAGACGTTTCATTAACTTaGATGCGTTTACAGGATGCCCAACAAACCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: THSTQCSDVSLT*MRLQDAQQTPL Trigger: CAGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAACACTGAGTGGAGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS CCA 72 bp | ACTTATGTTGCACTCCTGGAAGATTCCCCTTTGAGATaGTATTTGTGTCCAGATTGTAGGTGTCTTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TYVALLEDSPLR*YLCPDCRCLAA Trigger: GGCTGCAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGGAGTGCAACATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS CCA 72 bp | TCTGATGTTCAGGATCTGGAAGATTCCCCTTTGAGATaGTATTTGTGTCCAGATTGTAGGTGTCTTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SDVQDLEDSPLR*YLCPDCRCLAA Trigger: GGCTGCAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGATCCTGAACATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092512.11 |
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| CDS CAA 90 bp | AGATTCTCCAACTCACTCCACTCAGTGTTCAGACGTTTCATTAACTaGAATGCGTTTACAGGATGCCCAACAAACCCCTCTGGGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RFSNSLHSVFRRFIN*NAFTGCPTNPSGSF Trigger: AAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAACACTGAGTGGAGTGAGTTGGAGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS TCA 72 bp | AGCTCTCTGATGTTCAGGATCTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAGATTGTAGGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSLMFRIWKIPL*DGICVQIVGVL Trigger: CAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGATCCTGAACATCAGAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092512.11 |
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| CDS CAA 72 bp | AACTCACTCCACTCAGTGTTCAGACGTTTCATTAACTaGAATGCGTTTACAGGATGCCCAACAAACCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSLHSVFRRFIN*NAFTGCPTNPS Trigger: AGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAACACTGAGTGGAGTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS TCA 72 bp | GAAAGACTTATGTTGCACTCCTGGAAGATTCCCCTTTaGGATGGTATTTGTGTCCAGATTGTAGGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ERLMLHSWKIPL*DGICVQIVGVL Trigger: CAAGACACCTACAATCTGGACACAAATACCATCTCAAAGGGGAATCTTCCAGGAGTGCAACATAAGTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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| CDS GCA 72 bp | TTCAGACGTTTCATTAACTTGAATGCGTTTACAGGATaGCCAACAAACCCCTCTGGGTCTTTTGTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: FRRFINLNAFTG*PTNPSGSFVAV Trigger: TACAGCAACAAAAGACCCAGAGGGGTTTGTTGGGCATCCTGTAAACGCATTCAAGTTAATGAAACGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009789.15 ENSMUST00000092512.11 ENSMUST00000105466.3 |
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| CDS TCA 72 bp | ATATATTCAAAATATACTAAGTTACCATTAGCTCTCTaGTGTTCAGGATCTAGCTCAAGAAGCTTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IYSKYTKLPLAL*CSGSSSRSFLV Trigger: CACCAAGAAGCTTCTTGAGCTAGATCCTGAACATCAGAGAGCTAATGGTAACTTAGTATATTTTGAATATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009789.15 ENSMUST00000105466.3 |
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