Pregenerated sensors for P3R3URF (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078593

Ensembl transcript IDs: ENSMUST00000106492.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ACACTTGAACATACTGGGACACCGGCGCCTGGGCCCACCCATCCCTaGCCTTCGGTAGGGAGAAGTCAAGCCCGGAGGCCGAGGGGCTCG	+
Preference number: 5 (lower is better) Translates to: TLEHTGTPAPGPTHP*PSVGRSQARRPRGS Trigger: CGAGCCCCTCGGCCTCCGGGCTTGACTTCTCCCTACCGAAGGCCAGGGATGGGTGGGCCCAGGCGCCGGTGTCCCAGTATGTTCAAGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106492.3
CDS CCA 90 bp	CGTGTCACTGATGTTTGTGGCCTCAGAGGCAGGATTGGTGGCAGTTaGGCCTCGGGGTTTCTGCCGGTATGTCCTGCGGCTACACTTGAA	+
Preference number: 5 (lower is better) Translates to: RVTDVCGLRGRIGGS*ASGFLPVCPAATLE Trigger: TTCAAGTGTAGCCGCAGGACATACCGGCAGAAACCCCGAGGCCCAACTGCCACCAATCCTGCCTCTGAGGCCACAAACATCAGTGACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106492.3
CDS CCA 72 bp	CATACTGGGACACCGGCGCCTGGGCCCACCCATCCCTaGCCTTCGGTAGGGAGAAGTCAAGCCCGGAGGCCG	+
Preference number: 6 (lower is better) Translates to: HTGTPAPGPTHP*PSVGRSQARRP Trigger: CGGCCTCCGGGCTTGACTTCTCCCTACCGAAGGCCAGGGATGGGTGGGCCCAGGCGCCGGTGTCCCAGTATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106492.3

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