Pregenerated sensors for P3H4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006931Ensembl transcript IDs: ENSMUST00000066489.13, ENSMUST00000141840.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTGGCCAGGATCTCACTGTGTAGGCTGGGCTGGTCCCGAGATCTaGCTGCTTCTGCCTCCCCCGGGTGCCAGGGTTAAGGGTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: AWPGSHCVGWAGPEI*LLLPPPGARVKGVC Trigger: GCACACACCCTTAACCCTGGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACAGTGAGATCCTGGCCAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR TCA 90 bp | CTCTGCAGCTCAGACACAACCGCCACCTGGCTGGCCTTGGTCCTGTaGGACTCAAGCCGGAAGCTGAAAACTTCCGCAGGAGCAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LCSSDTTATWLALVL*DSSRKLKTSAGAER Trigger: CCTTTCTGCTCCTGCGGAAGTTTTCAGCTTCCGGCTTGAGTCTCACAGGACCAAGGCCAGCCAGGTGGCGGTTGTGTCTGAGCTGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR GCA 90 bp | GACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTACCAGTCTaGGGTTCAAAGACACAAGAGAGAGAGAGAGAGCTAAGGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DPQELTSQPAIWLPV*GSKTQERERELRWR Trigger: CCTCCACCTTAGCTCTCTCTCTCTCTCTTGTGTCTTTGAACCGCAGACTGGTAGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR CCA 90 bp | AAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATaGCTACCAGTCTGCGGTTCAAAGACACAAGAGAGAGAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: KGDRDPQELTSQPAI*LPVCGSKTQERERE Trigger: CTCTCTCTCTCTCTCTTGTGTCTTTGAACCGCAGACTGGTAGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCGCTGGTCCCGAGATCTaGCTGCTTCTGCCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: SKPNVLHNPLCSSDTTATAGPEI*LLLPPP Trigger: CGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGC...GGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTTCACCGCAATCCACCTaGCCCTGCATCCCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QKGRQRPPRAHFPTSNMASPQST*PCIPAA Trigger: AGCAGCTGGGATGCAGGGGCAGGTGGATTGCGGTGA...AGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATCACTACAGGCTAGCCTaGAACTCACCGCAATCCACC | + |
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Preference number: 2 (lower is better) Translates to: GAERETETPKSSLPNQQYHYRLA*NSPQST Trigger: GGTGGATTGCGGTGAGTTTCAGGCTAGCCTGTAGTG...ATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATCAATCCACCTGCCCCTaGATCCCAGCTGCTGCAATT | + |
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Preference number: 2 (lower is better) Translates to: GAERETETPKSSLPNQQYQSTCP*IPAAAI Trigger: AATTGCAGCAGCTGGGATGCAGGGGCAGGTGGATTG...ATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATAGGGTTAAGGGTGTGTaGCACCACACCTGGCTATTT | + |
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Preference number: 2 (lower is better) Translates to: QEQKGRQRPPRAHFPTSNRVKGV*HHTWLF Trigger: AAATAGCCAGGTGTGGTGGCACACACCCTTAACCCT...ATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTAAGGTGGAGGCTGAGTaGAAACTAGGTCAACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: AENFRRSRKGDRDPQELTKVEAE*KLGQLC Trigger: ACACAGTTGACCTAGTTTCCACTCAGCCTCCACCTT...AGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATTTAATAAATAGTTCTTaGCCCCAGCCAGGTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QEQKGRQRPPRAHFPTSNLINSS*PQPGVL Trigger: CAGGACACCTGGCTGGGGGCAAGAACTATTTATTAA...ATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGATATGGCTACCAGTCTaGGGTTCAAAGACACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KPNVLHNPLCSSDTTATWIWLPV*GSKTQE Trigger: CTCTTGTGTCTTTGAACCGCAGACTGGTAGCCATAT...CCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTATCTCATTATGTAGCCTaGCCTGGCCAGGATCTCACT | + |
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Preference number: 2 (lower is better) Translates to: RKGDRDPQELTSQPAIWLSHYVA*PGQDLT Trigger: AGTGAGATCCTGGCCAGGCCAGGCTACATAATGAGA...TAGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGCAATTAAAGGCATGTaGTGCCACACTCAGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: GAERETETPKSSLPNQQYAIKGM*CHTQLF Trigger: AAACAACTGAGTGTGGCATCACATGCCTTTAATTGC...ATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR-3UTR CCA 90 bp | AGCAATATGGCTACCAGTCTGCGGTTCAAAGACACAAGAGAGAGAGAGAGAGCTTTATGTAGCCTGGCCTaGCCAGGATCTCACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: SNMATSLRFKDTRERERALCSLA*PGSHCV Trigger: TACACAGTGAGATCCTGGCCAGGCCAGGCTACATAA...AGCTCTCTCTCTCTCTCTTGTGTCTTTGAACCGCAGACTGGTAGCCATATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR CCA 72 bp | CCTGGCCTGGCCAGGATCTCACTGTGTAGGCTGGGCTaGTCCCGAGATCTGCCTGCTTCTGCCTCCCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: PGLARISLCRLG*SRDLPASASPG Trigger: CCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACAGTGAGATCCTGGCCAGGCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR GCA 72 bp | GGATCTCACTGTGTAGGCTGGGCTGGTCCCGAGATCTaGCTGCTTCTGCCTCCCCCGGGTGCCAGGGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: GSHCVGWAGPEI*LLLPPPGARVK Trigger: CTTAACCCTGGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACAGTGAGATCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR CCA 72 bp | TGTAGCCTGGCCTGGCCAGGATCTCACTGTGTAGGCTaGGCTGGTCCCGAGATCTGCCTGCTTCTGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: CSLAWPGSHCVG*AGPEICLLLPP Trigger: GGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACAGTGAGATCCTGGCCAGGCCAGGCTACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR TCA 72 bp | AGCCTCTACTGGCCTAGAACTCACTACAGGCTAGCCTaGAACTCACCGCAATCCACCTGCCCCTGCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: SLYWPRTHYRLA*NSPQSTCPCIP Trigger: TGGGATGCAGGGGCAGGTGGATTGCGGTGAGTTTCAGGCTAGCCTGTAGTGAGTTCTAGGCCAGTAGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR TCA 72 bp | GGCTGGCCTTGGTCCTGTGAGACTCAAGCCGGAAGCTaGAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GWPWSCETQAGS*KLPQEQKGRQR Trigger: TCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTTCAGCTTCCGGCTTGAGTCTCACAGGACCAAGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| 3UTR GCA 72 bp | CAGAGCTCTAAGCCCAATGTTCTTCACAACCCACTCTaGAGCTCAGACACAACCGCCACCTGGCTGGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: QSSKPNVLHNPL*SSDTTATWLAL Trigger: CAAGGCCAGCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTTAGAGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | CCGAGATCTGCCTGCTTCTGCCTCCCCCGGGTGCCAGGGTTAAGGGTGTGTGCCCTGTATTTCTCGTACTaGGCCCCGGCGCTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRSACFCLPRVPGLRVCALYFSY*APALPS Trigger: GCTGGGCAGCGCCGGGGCCCAGTACGAGAAATACAG...GGCACACACCCTTAACCCTGGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | TGTGTAGGCTGGGCTGGTCCCGAGATCTGCCTGCTTCTGCCTCCCCCGGGTGCCCGGTCAGCTCGTGCTTaGGGTTCCTCTGGAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: CVGWAGPEICLLLPPPGARSARA*GSSGGR Trigger: CCTTCCTCCAGAGGAACCCCAAGCACGAGCTGACCG...GGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | GGTCCCGAGATCTGCCTGCTTCTGCCTCCCCCGGGTGCCAGGGTTAAGGGTGTGGCTCCATGTCTTCTGTaGTGCTGCGAAAGTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GPEICLLLPPPGARVKGVAPCLL*CCESPR Trigger: GCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGC...CACACCCTTAACCCTGGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | AGTTCTTGCCCCCAGCCAGGTGTCCTGAGCTTGAAGAGTGCGCCATGTCACCGCCGGGGCCACTACAGTTaGCGTGGCAGAAGGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SSCPQPGVLSLKSAPCHRRGHYS*RGRRPR Trigger: GCGAGGCCTTCTGCCACGCCAACTGTAGTGGCCCCG...GCGGTGACATGGCGCACTCTTCAAGCTCAGGACACCTGGCTGGGGGCAAGAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | CCTGCCCCTGCATCCCAGCTGCTGCAATTAAAGGCATGTGATGCCACACTCAGTCGGGCAGCGTCTTCTTaGAGCGCCGCAGGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PAPASQLLQLKACDATLSRAASS*SAAGRR Trigger: CCGCCTGCCTGCGGCGCTGCAAGAAGACGCTGCCCG...ACTGAGTGTGGCATCACATGCCTTTAATTGCAGCAGCTGGGATGCAGGGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | GGTCCCGAGATCTGCCTGCTTCTGCCTCCCCCGGGTGCCAGGGTTAAGGGTGTGCAGTCCACCTTGCACTaGAGGGATTCTGCGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GPEICLLLPPPGARVKGVQSTLH*RDSAKR Trigger: TCTCTTCGCAGAATCCCTGCAGTGCAAGGTGGACTG...CACACCCTTAACCCTGGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | CAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATGTAGGCCGTGGCCAGTaGCATCAGGTCCTCCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QEQKGRQRPPRAHFPTSNVGRGQ*HQVLRR Trigger: CCTCCGGAGGACCTGATGCCACTGGCCACGGCCTAC...ATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | CCTGCCCCTGCATCCCAGCTGCTGCAATTAAAGGCATGTGATGCCACACTCAGTGCCGAGGCTGAGAGGTaGCGGGGCCACTACAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PAPASQLLQLKACDATLSAEAER*RGHYSW Trigger: CCAACTGTAGTGGCCCCGCCACCTCTCAGCCTCGGC...ACTGAGTGTGGCATCACATGCCTTTAATTGCAGCAGCTGGGATGCAGGGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | AGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGCCGGCCTCGTCACCCTTaGCTTCTGGCTCTTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SPMFFTTHSAAQTQPPPGRPRHP*LLALAT Trigger: GGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCG...GCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | CTGAAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCGTGGCCGTAGGCCGTaGCCAGTGGCATCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKTSAGAERETETPKSSLRGRRP*PVASGP Trigger: AGGACCTGATGCCACTGGCCACGGCCTACGGCCACG...AAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | AAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCTGTCAGTTCAGGCTCTaGCTCGGCCTCGGCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: KTSAGAERETETPKSSLPCQFRL*LGLGLV Trigger: GACGAGGCCGAGGCCGAGCCAGAGCCTGAACTGACA...GGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | AGTTCTTGCCCCCAGCCAGGTGTCCTGAGCTTGAAGAGTGCGCCATGTCACCGCTCCCCCTGTAGTAGTTaGGATACTTGGCGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSCPQPGVLSLKSAPCHRSPCSS*DTWRSA Trigger: AGCTGACCGCCAAGTATCTCAACTACTACAGGGGGA...GCGGTGACATGGCGCACTCTTCAAGCTCAGGACACCTGGCTGGGGGCAAGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | CAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATTTGGCGGTCAGCTCGTaGTTGGGGTTCCTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QEQKGRQRPPRAHFPTSNLAVSS*LGFLWR Trigger: CCTCCAGAGGAACCCCAAGCACGAGCTGACCGCCAA...ATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | AGTTCTTGCCCCCAGCCAGGTGTCCTGAGCTTGAAGAGTGCGCCATGTCACCGCGCACTGCAGGGATTCTaGGAAGAGATCTGCTATCGC | + |
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Preference number: 4 (lower is better) Translates to: SSCPQPGVLSLKSAPCHRALQGF*EEICYR Trigger: GCGATAGCAGATCTCTTCGCAGAATCCCTGCAGTGC...GCGGTGACATGGCGCACTCTTCAAGCTCAGGACACCTGGCTGGGGGCAAGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | AATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGCTGGCCGTCACCCTTGGCTTCTaGCTCTTGCCACCAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NVLHNPLCSSDTTATWLAVTLGF*LLPPVS Trigger: GCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGAC...GGCCAGCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | AGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGCCACCTACGTTGGGGGTaGGATTGGTCTCACAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPMFFTTHSAAQTQPPPGHLRWG*DWSHSP Trigger: TGGACTGTGAGACCAATCTCACCCCCAACGTAGGTG...GCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | GCTGAAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCTTGAAGTCTACCTaGTCGTGGGCCCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: AENFRRSRKGDRDPQELTSLKST*SWAPSQ Trigger: CTGTGAGGGGGCCCACGAGCAGGTAGACTTCAAGGA...AGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | GCTCTAAGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACAGCAGCTGCCGCGGTaGGTAAGGGACTTGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: ALSPMFFTTHSAAQTQPPQQLPR*VRDLKG Trigger: GCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTG...TGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTTAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CCA 90 bp | AGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGCGCACTGCGGGCAGCCTaGCGTACATCATTCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPMFFTTHSAAQTQPPPGALRAA*RTSFSL Trigger: CAAACTGAATGATGTACGCCAGGCTGCCCGCAGTGC...GCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | AAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCCTGGGTAGAAGTCCTTaGAGTCTACCTGCTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KTSAGAERETETPKSSLPLGRSP*SLPARG Trigger: CCCACGAGCAGGTAGACTTCAAGGACTTCTACCCAG...GGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | AGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTGGCTCTCACAGTCCACCTTaGACTGCAGGGATTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: SPMFFTTHSAAQTQPPPGSHSPP*TAGILR Trigger: TCGCAGAATCCCTGCAGTGCAAGGTGGACTGTGAGA...GCCAGGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | CAGCTGCTGCAATTAAAGGCATGTGATGCCACACTCAGTTGTTTTTGTTTTGAAGCGCGCTCCAGGACGTaGCCGAAGAGCCGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QLLQLKACDATLSCFCFEARSRT*PKSRSS Trigger: CGAGCTGCGGCTCTTCGGTCACGTCCTGGAGCGCGC...TTCAAAACAAAAACAACTGAGTGTGGCATCACATGCCTTTAATTGCAGCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTATATACCAGGTTCTGCTaGATAACGCTGTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKGDRDPQELTSQPAIWLYTRFC*ITLSLG Trigger: CCCCAAGGACAGCGTTATGCAGCAGAACCTGGTATA...TAGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | AGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTAATCTCATCGTCTGACTaGAGGTACATGTGTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKGDRDPQELTSQPAIWLISSSD*RYMCVK Trigger: CTTCACACACATGTACCTTCAGTCAGACGATGAGAT...TAGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR TCA 90 bp | TGTTTTGAAACAAAATCTCATTATGTAGCCTGGCCTGGCCAGGATCTCACTGTGTTCAGGCTCTGGGAGTaGTTCTGTCTCCTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: CFETKSHYVAWPGQDLTVFRLWE*FCLLQF Trigger: GAACTGGAGGAGACAGAATCACTCCCAGAGCCTGAA...CACAGTGAGATCCTGGCCAGGCCAGGCTACATAATGAGATTTTGTTTCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 90 bp | GCTGCCGCGGTGGGTAAGGGACTTGAAAGGCGGGCAGCGTCTTCTTaGAGCGCCGCAGGCAGGCGGCGCGCTCCAGGACGTGACCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAAVGKGLERRAASS*SAAGRRRAPGRDRR Trigger: TCTTCGGTCACGTCCTGGAGCGCGCCGCCTGCCTGCGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | TGTGTAGGCTGGGCTGGTCCCGAGATCTGCCTGCTTCTGCCTCCCCCGGGTGCCGCGGGGCCACTACAGTaGGCGTGGCAGAAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CVGWAGPEICLLLPPPGAAGPLQ*AWQKAS Trigger: CGAGGCCTTCTGCCACGCCAACTGTAGTGGCCCCGC...GGCACCCGGGGGAGGCAGAAGCAGGCAGATCTCGGGACCAGCCCAGCCTACACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 90 bp | CTGATAGGGCAGGCGGCTCTGGAAGTCGCGCAGCAGCTGCCGCGGTaGGTAAGGGACTTGAAAGGCGGGCAGCGTCTTCTTGCAGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LIGQAALEVAQQLPR*VRDLKGGQRLLAAP Trigger: CGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTGCGCGACTTCCAGAGCCGCCTGCCCTATCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 90 bp | GCCAGCTTTCGCCTTCGTATTGCTCCAGAGCGTGGCCGTAGGCCGTaGCCAGTGGCATCAGGTCCTCCGGAGGGAATCCTCGGAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASFRLRIAPERGRRP*PVASGPPEGILGSC Trigger: ACAGCTTCCGAGGATTCCCTCCGGAGGACCTGATGCCACTGGCCACGGCCTACGGCCACGCTCTGGAGCAATACGAAGGCGAAAGCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATGCGGGCAGCGTCTTCTaGCAGCGCCGCAGGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QEQKGRQRPPRAHFPTSNAGSVF*QRRRQA Trigger: CGCCTGCCTGCGGCGCTGCAAGAAGACGCTGCCCGC...ATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 90 bp | GCAGGGATTCTGCGAAGAGATCTGCTATCGCTGGGTAGAAGTCCTTaGAGTCTACCTGCTCGTGGGCCCCCTCACAGCCAGCTAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: AGILRRDLLSLGRSP*SLPARGPPHSQLDT Trigger: GGTGTCTAGCTGGCTGTGAGGGGGCCCACGAGCAGGTAGACTTCAAGGACTTCTACCCAGCGATAGCAGATCTCTTCGCAGAATCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | TCTAAGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCTCGGCCTCGTCACCCTaGGCTTCTGGCTCTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKPNVLHNPLCSSDTTATSASSP*ASGSCH Trigger: GTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGA...GGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | AAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCGCTTTCGCCTTCGTATaGCTCCAGAGCGTGGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KTSAGAERETETPKSSLPAFAFV*LQSVAV Trigger: TACGGCCACGCTCTGGAGCAATACGAAGGCGAAAGC...GGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | TCTAAGCCCAATGTTCTTCACAACCCACTCTGCAGCTCAGACACAACCGCCACCCGGTGGGTAAGGGACTaGAAAGGCGGGCAGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKPNVLHNPLCSSDTTATRWVRD*KGGQRL Trigger: AAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCG...GGTGGCGGTTGTGTCTGAGCTGCAGAGTGGGTTGTGAAGAACATTGGGCTTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 90 bp | CCGTCATATATTCAGCCAGGGCCCGCTCCATGTCTTCTGTGCTGCTaGGAAAGTCCCCGCTGTTGTAAAGTTTCACAGCCCGGAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PSYIQPGPAPCLLCC*ESPRCCKVSQPGGT Trigger: TGTTCCTCCGGGCTGTGAAACTTTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATATGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 90 bp | AGACCGTCATATATTCAGCCAGGGCCCGCTCCATGTCTTCTGTGCTaGTGCGAAAGTCCCCGCTGTTGTAAAGTTTCACAGCCCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSYIQPGPAPCLLC*CESPRCCKVSQPGG Trigger: TCCTCCGGGCTGTGAAACTTTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATATGACGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | AAGCCGGAAGCTGAAAACTTCCGCAGGAGCAGAAAGGGAGACAGAGACCCCCAAACGTTGGGGGTGAGATaGGTCTCACAGTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPEAENFRRSRKGDRDPQTLGVR*VSQSTL Trigger: CAAGGTGGACTGTGAGACCAATCTCACCCCCAACGT...TTGGGGGTCTCTGTCTCCCTTTCTGCTCCTGCGGAAGTTTTCAGCTTCCGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 90 bp | TGGTGGCCACAAACTTGTCCACAAAGAAGCCACCTACGTTGGGGGTaGGATTGGTCTCACAGTCCACCTTGCACTGCAGGGATTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WWPQTCPQRSHLRWG*DWSHSPPCTAGILR Trigger: TCGCAGAATCCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGTGGACAAGTTTGTGGCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 90 bp | CAAAGACCGTCATATATTCAGCCAGGGCCCGCTCCATGTCTTCTGTaGTGCTGCGAAAGTCCCCGCTGTTGTAAAGTTTCACAGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRPSYIQPGPAPCLL*CCESPRCCKVSQPG Trigger: TCCGGGCTGTGAAACTTTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATATGACGGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGGAGACAGAGACCCCCAAGAGCTCACTTCCCAACCAGCAATATGGCTCTTGGCTTCTGGCTCTaGCCACCAGTCAGCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QKGRQRPPRAHFPTSNMALGFWL*PPVSIE Trigger: CTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAG...AGCCATATTGCTGGTTGGGAAGTGAGCTCTTGGGGGTCTCTGTCTCCCTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS-3UTR CAA 90 bp | TGTTTTGAAACAAAATCTCATTATGTAGCCTGGCCTGGCCAGGATCTCACTGTGGCGGTCAGCTCGTGCTaGGGGTTCCTCTGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFETKSHYVAWPGQDLTVAVSSC*GFLWRK Trigger: CTTCCTCCAGAGGAACCCCAAGCACGAGCTGACCGC...CACAGTGAGATCCTGGCCAGGCCAGGCTACATAATGAGATTTTGTTTCAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 90 bp | TCTCCTCCAGTTCCATCTCATCGTCTGACTGAAGGTACATGTGTGTaGAGTCTAGCAACTCCCGGAGCTCAGAGGTCTGGTTGTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPVPSHRLTEGTCV*SLATPGAQRSGCGR Trigger: TCTACCACAACCAGACCTCTGAGCTCCGGGAGTTGCTAGACTTCACACACATGTACCTTCAGTCAGACGATGAGATGGAACTGGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066489.13 ENSMUST00000141840.2 |
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| CDS TCA 90 bp | TCTGGGAGTGATTCTGTCTCCTCCAGTTCCATCTCATCGTCTGACTaGAGGTACATGTGTGTGAAGTCTAGCAACTCCCGGAGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSDSVSSSSISSSD*RYMCVKSSNSRSSE Trigger: CTCTGAGCTCCGGGAGTTGCTAGACTTCACACACATGTACCTTCAGTCAGACGATGAGATGGAACTGGAGGAGACAGAATCACTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066489.13 ENSMUST00000141840.2 |
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| CDS-3UTR CAA 90 bp | CAACCAGCAATATGGCTACCAGTCTGCGGTTCAAAGACACAAGAGAGAGAGAGAATGGTGGCCACAAACTaGTCCACAAAGAAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QPAIWLPVCGSKTQERERMVATN*STKKPP Trigger: AGGTGGCTTCTTTGTGGACAAGTTTGTGGCCACCAT...TCTCTCTCTCTCTTGTGTCTTTGAACCGCAGACTGGTAGCCATATTGCTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 90 bp | GCGGCTCTGGAAGTCGCGCAGCAGCTGCCGCGGTGGGTAAGGGACTaGAAAGGCGGGCAGCGTCTTCTTGCAGCGCCGCAGGCAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AALEVAQQLPRWVRD*KGGQRLLAAPQAGG Trigger: GCCGCCTGCCTGCGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTGCGCGACTTCCAGAGCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 72 bp | GTGGGTAAGGGACTTGAAAGGCGGGCAGCGTCTTCTTaGAGCGCCGCAGGCAGGCGGCGCGCTCCAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: VGKGLERRAASS*SAAGRRRAPGR Trigger: ACGTCCTGGAGCGCGCCGCCTGCCTGCGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 72 bp | GTAGCGCGCGCTCTCGCGCCAGCTTTCGCCTTCGTATaGCTCCAGAGCGTGGCCGTAGGCCGTGGCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VARALAPAFAFV*LQSVAVGRGQW Trigger: CCACTGGCCACGGCCTACGGCCACGCTCTGGAGCAATACGAAGGCGAAAGCTGGCGCGAGAGCGCGCGCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 72 bp | GAAGTCGCGCAGCAGCTGCCGCGGTGGGTAAGGGACTaGAAAGGCGGGCAGCGTCTTCTTGCAGCGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVAQQLPRWVRD*KGGQRLLAAPQ Trigger: CTGCGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTGCGCGACTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | TCCGGAGGGAATCCTCGGAAGCTGTATTTCTCGTACTaGGCCCCGGCGCTGCCCAGCAGCAGCCACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGGNPRKLYFSY*APALPSSSHSS Trigger: GCTGCTGTGGCTGCTGCTGGGCAGCGCCGGGGCCCAGTACGAGAAATACAGCTTCCGAGGATTCCCTCCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | CGCCTTCGTATTGCTCCAGAGCGTGGCCGTAGGCCGTaGCCAGTGGCATCAGGTCCTCCGGAGGGAATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLRIAPERGRRP*PVASGPPEGIL Trigger: GAGGATTCCCTCCGGAGGACCTGATGCCACTGGCCACGGCCTACGGCCACGCTCTGGAGCAATACGAAGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | CAGGCGGCTCTGGAAGTCGCGCAGCAGCTGCCGCGGTaGGTAAGGGACTTGAAAGGCGGGCAGCGTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QAALEVAQQLPR*VRDLKGGQRLL Trigger: AAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTGCGCGACTTCCAGAGCCGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | GTATTGCTCCAGAGCGTGGCCGTAGGCCGTGGCCAGTaGCATCAGGTCCTCCGGAGGGAATCCTCGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLLQSVAVGRGQ*HQVLRRESSEA Trigger: AGCTTCCGAGGATTCCCTCCGGAGGACCTGATGCCACTGGCCACGGCCTACGGCCACGCTCTGGAGCAATAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 90 bp | AGGCTCTGGCTCGGCCTCGGCCTCGTCACCCTTGGCTTCTGGCTCTaGCCACCAGTCAGCATAGAGACCTTCCTCATAGTCGCCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLWLGLGLVTLGFWL*PPVSIETFLIVALA Trigger: GGCGAGGGCGACTATGAGGAAGGTCTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGAGGCCGAGCCAGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | CTCTGGCTCGGCCTCGGCCTCGTCACCCTTGGCTTCTaGCTCTTGCCACCAGTCAGCATAGAGACCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LWLGLGLVTLGF*LLPPVSIETFL Trigger: GAGGAAGGTCTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGAGGCCGAGCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CCA 72 bp | GTTCAGGCTCTGGCTCGGCCTCGGCCTCGTCACCCTTaGCTTCTGGCTCTTGCCACCAGTCAGCATAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VQALARPRPRHP*LLALATSQHRD Trigger: GTCTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGAGGCCGAGCCAGAGCCTGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 72 bp | CTCGGCCTCGGCCTCGTCACCCTTGGCTTCTGGCTCTaGCCACCAGTCAGCATAGAGACCTTCCTCATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLGLVTLGFWL*PPVSIETFLIV Trigger: GACTATGAGGAAGGTCTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGAGGCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 72 bp | CTGCGAAGAGATCTGCTATCGCTGGGTAGAAGTCCTTaGAGTCTACCTGCTCGTGGGCCCCCTCACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRDLLSLGRSP*SLPARGPPHSQ Trigger: CTGGCTGTGAGGGGGCCCACGAGCAGGTAGACTTCAAGGACTTCTACCCAGCGATAGCAGATCTCTTCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 72 bp | TTGGGGGTGAGATTGGTCTCACAGTCCACCTTGCACTaGAGGGATTCTGCGAAGAGATCTGCTATCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGVRLVSQSTLH*RDSAKRSAIAG Trigger: CCCAGCGATAGCAGATCTCTTCGCAGAATCCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 72 bp | CAAACTTGTCCACAAAGAAGCCACCTACGTTGGGGGTaGGATTGGTCTCACAGTCCACCTTGCACTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QTCPQRSHLRWG*DWSHSPPCTAG Trigger: CCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGTGGACAAGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 72 bp | GTGGCCACAAACTTGTCCACAAAGAAGCCACCTACGTaGGGGGTGAGATTGGTCTCACAGTCCACCTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VATNLSTKKPPT*GVRLVSQSTLH Trigger: GTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGTGGACAAGTTTGTGGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 90 bp | GCCACAAACTTGTCCACAAAGAAGCCACCTACGTTGGGGGTGAGATaGGTCTCACAGTCCACCTTGCACTGCAGGGATTCTGCGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ATNLSTKKPPTLGVR*VSQSTLHCRDSAKR Trigger: TCTCTTCGCAGAATCCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGTGGACAAGTTTGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 72 bp | ACTCATCTCCAATATCCAGCATCCCCCTGTAGTAGTTaGGATACTTGGCGGTCAGCTCGTGCTTGGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: THLQYPASPCSS*DTWRSARAWGS Trigger: GGAACCCCAAGCACGAGCTGACCGCCAAGTATCTCAACTACTACAGGGGGATGCTGGATATTGGAGATGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS GCA 72 bp | TATATTCAGCCAGGGCCCGCTCCATGTCTTCTGTGCTaGTGCGAAAGTCCCCGCTGTTGTAAAGTTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YIQPGPAPCLLC*CESPRCCKVSQ Trigger: CTGTGAAACTTTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS CAA 72 bp | TTGTCCACAAAGAAGCCACCTACGTTGGGGGTGAGATaGGTCTCACAGTCCACCTTGCACTGCAGGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSTKKPPTLGVR*VSQSTLHCRDS Trigger: AGAATCCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGTGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 72 bp | GTTCCATCTCATCGTCTGACTGAAGGTACATGTGTGTaGAGTCTAGCAACTCCCGGAGCTCAGAGGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VPSHRLTEGTCV*SLATPGAQRSG Trigger: ACCAGACCTCTGAGCTCCGGGAGTTGCTAGACTTCACACACATGTACCTTCAGTCAGACGATGAGATGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066489.13 ENSMUST00000141840.2 |
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| CDS GCA 72 bp | TCATATATTCAGCCAGGGCCCGCTCCATGTCTTCTGTaGTGCTGCGAAAGTCCCCGCTGTTGTAAAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SYIQPGPAPCLL*CCESPRCCKVS Trigger: TGAAACTTTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066489.13 |
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| CDS TCA 72 bp | GATTCTGTCTCCTCCAGTTCCATCTCATCGTCTGACTaGAGGTACATGTGTGTGAAGTCTAGCAACTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DSVSSSSISSSD*RYMCVKSSNSR Trigger: CCGGGAGTTGCTAGACTTCACACACATGTACCTTCAGTCAGACGATGAGATGGAACTGGAGGAGACAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066489.13 ENSMUST00000141840.2 |
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