Pregenerated sensors for P3H3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023191Ensembl transcript IDs: ENSMUST00000023958.10, ENSMUST00000135127.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATACACCATaGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: SARAQRRPRVTAHTP*GFSPPELKATRRPH Trigger: GTGTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGAATCCCCATGGTGTATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR TCA 90 bp | AAAGCGTTCATGAGGACTATGAGGAGAGCGGCGGCCACGGTAGCCTaGCCTGGCTCCAGCCTGTGCTGCATCCTTGGCCAGCTGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KAFMRTMRRAAATVA*PGSSLCCILGQLQQ Trigger: CTGCTGCAGCTGGCCAAGGATGCAGCACAGGCTGGAGCCAGGTCAGGCTACCGTGGCCGCCGCTCTCCTCATAGTCCTCATGAACGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 90 bp | TTGGCTTCTGTCCACTCCTGTTCACTGTGCTCAGGTGCCCACGTGTaGCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: LASVHSCSLCSGAHV*HSARAQRRPRVTAH Trigger: ATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACTGTGGCACACGTGGGCACCTGAGCACAGTGAACAGGAGTGGACAGAAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CCA 90 bp | TGTCTGTCCTGGGGACCTTGCAGGTCCCTCAGCTGGGGCCAGACCTaGCTCCCGGGCCTGATGTGCTGTAGGCTAAGTCTGTGTAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: CLSWGPCRSLSWGQT*LPGLMCCRLSLCSK Trigger: CTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGGTCCCCAGGACAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR TCA 90 bp | CTAAGACAGCTCGCTCCGACCCATTCAGCTGCTGGGCGTCCTGCGTaGGGGTCACACCCTCCATCAGAAGGGCATCCTTCCAGTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LRQLAPTHSAAGRPA*GSHPPSEGHPSSEP Trigger: TGGCTCACTGGAAGGATGCCCTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 90 bp | TGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTaGTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGAGTCCAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: CRSLSWGQTWLPGLM*CRLSLCSKLVSPGS Trigger: AGACCCTGGACTCACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR CCA 90 bp | CCACATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTaGGGACCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: PHACLSGRHSDFCLS*GPCRSLSWGQTWLP Trigger: CGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR CCA 90 bp | GTTAGCAGCCCATCTAAGACAGCTCGCTCCGACCCATTCAGCTGCTaGGCGTCCTGCGTGAGGGTCACACCCTCCATCAGAAGGGCATCC | + |
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Preference number: 1 (lower is better) Translates to: VSSPSKTARSDPFSC*ASCVRVTPSIRRAS Trigger: GGATGCCCTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAGATGGGCTGCTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 90 bp | GAAGTTAGCAGCCCATCTAAGACAGCTCGCTCCGACCCATTCAGCTaGTGGGCGTCCTGCGTGAGGGTCACACCCTCCATCAGAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: EVSSPSKTARSDPFS*WASCVRVTPSIRRA Trigger: TGCCCTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAGATGGGCTGCTAACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 90 bp | CTCCCGCCAGCATTCGCCAGTGTCGGGGTCCAGGACACAGTTGTCTaGATGAACCGGGTGACTCAGGTCCATACGCTGCTCTTGTTCACC | + |
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Preference number: 1 (lower is better) Translates to: LPPAFASVGVQDTVV*MNRVTQVHTLLLFT Trigger: GGTGAACAAGAGCAGCGTATGGACCTGAGTCACCCGGTTCATGCAGACAACTGTGTCCTGGACCCCGACACTGGCGAATGCTGGCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CCA 90 bp | CTTCTCTCCGAGGGAGCGAAGGATGAACCGCTGGATGTCCTCTCGTaGTCCCAGGTCAGGTCTTGGCTCTCCCAACTGAGTTTGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: LLSEGAKDEPLDVLS*SQVRSWLSQLSLVL Trigger: CAGTACCAAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGACCACGAGAGGACATCCAGCGGTTCATCCTTCGCTCCCTCGGAGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR TCA 90 bp | CCATGGCGTAATATAACTGTCTCTTCTCTCCGAGGGAGCGAAGGATaGACCGCTGGATGTCCTCTCGTGGTCCCAGGTCAGGTCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: PWRNITVSSLRGSEG*TAGCPLVVPGQVLA Trigger: AGCCAAGACCTGACCTGGGACCACGAGAGGACATCCAGCGGTTCATCCTTCGCTCCCTCGGAGAGAAGAGACAGTTATATTACGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR TCA 90 bp | TGGATGTCCTCTCGTGGTCCCAGGTCAGGTCTTGGCTCTCCCAACTaGGTTTGGTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTCT | + |
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Preference number: 1 (lower is better) Translates to: WMSSRGPRSGLGSPN*VWYWFRAFLAASSS Trigger: AGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGACCACGAGAGGACATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CCA 90 bp | AAGGATGAACCGCTGGATGTCCTCTCGTGGTCCCAGGTCAGGTCTTaGCTCTCCCAACTGAGTTTGGTACTGGTTCAGAGCCTTTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: KDEPLDVLSWSQVRS*LSQLSLVLVQSLFG Trigger: GCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGACCACGAGAGGACATCCAGCGGTTCATCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 90 bp | TCTCTGCTGAGAATGTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTaGAGCAGCTCTTTGGCTTCTGTCCACTCCTGTTCACTGTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLLRMSSSSSSSSSS*SSSLASVHSCSLCS Trigger: TGAGCACAGTGAACAGGAGTGGACAGAAGCCAAAGAGCTGCTGCAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGACATTCTCAGCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATGGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACACCGAGGTGCAGGTCCCTCAGCTaGGGCCAGACCTGGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: TMGILTTRAEGHKAPTPRCRSLS*GQTWLP Trigger: CGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCA...CCTCGGTGTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGAATCCCCATGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCTTGGCCAGCTGCAGCAGAACCCCACACTCGGCTGAAGTTAGCAGCCCATCTGTCCTGGGGACCTTaGAGGTCCCTCAGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: HPWPAAAEPHTRLKLAAHLSWGP*RSLSWG Trigger: GCCCCAGCTGAGGGACCTGCAAGGTCCCCAGGACAG...ATGGGCTGCTAACTTCAGCCGAGTGTGGGGTTCTGCTGCAGCTGGCCAAGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTCCTTCCCAAGTTGAGTaGCCTGATCCTGAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCPSQVE*PDPEKQ Trigger: CTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGG...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATACACCATGGGAGCCTCTCTCTCAGTaGCTTAGGGATGAGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CHSARAQRRPRVTAHTPWEPLSQ*LRDESL Trigger: GAGGCTCTCATCCCTAAGGCACTGAGAGAGAGGCTC...CCATGGTGTATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACTGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTAGCTGGGGCCAGACCTaGCTCCCGGGCCTGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: RRGRQISLRMVVSHHVVASWGQT*LPGLMC Trigger: GCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCT...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATACACCATGGGGTTCAGAGCCTTTTTaGCAGCCTCATCCTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: CHSARAQRRPRVTAHTPWGSEPF*QPHPLG Trigger: ACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACC...CCATGGTGTATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACTGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATGGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACACCGAGGCAGGACACAGTTGTCTaGATGAACCGGGTGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: TMGILTTRAEGHKAPTPRQDTVV*MNRVTQ Trigger: CTGAGTCACCCGGTTCATGCAGACAACTGTGTCCTG...CCTCGGTGTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGAATCCCCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATACACCATGGGGACTCAGGTCCATACGCTaGTCTTGTTCACCTAGGATA | + |
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Preference number: 2 (lower is better) Translates to: HSARAQRRPRVTAHTPWGLRSIR*SCSPRI Trigger: TATCCTAGGTGAACAAGAGCAGCGTATGGACCTGAG...TCCCCATGGTGTATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGTGAAGAACAGGTCGCCTCCCTTGAAGTCATCATTGAGGTAGAGGAGTCCAAGCAGCTTAGCGCCTaGCCTGCCCACAGTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LREEQVASLEVIIEVEESKQLSA*PAHSPC Trigger: GCAGGGACTGTGGGCAGGCCAGGCGCTAAGCTGCTT...GGACTCCTCTACCTCAATGATGACTTCAAGGGAGGCGACCTGTTCTTCACGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CAA 90 bp | GTCCTCTCGTGGTCCCAGGTCAGGTCTTGGCTCTCCCAACTGAGTTaGGTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: VLSWSQVRSWLSQLS*VLVQSLFGSLILWV Trigger: TACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGACCACGAGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTCTGCACTCCTCCACATaGCTGCCTTTCAGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RRGRQISLRMVVSHHVVALHSST*LPFREA Trigger: TGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAG...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGCTTCGGCACACCAGGTaGGTGAAGGAAAGATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TWLPGLMCCRLSLCSKLVLRHTR*VKERCS Trigger: ACTGCATCTTTCCTTCACCCACCTGGTGTGCCGAAG...CACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAGCCCATCTAAGACAGCTCGCTCCGACCCATTCAGCTGCTGGGCGTCCTATGCTACTATGTTCCTaGTATCCTCCAGAGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LAAHLRQLAPTHSAAGRPMLLCS*YPPEPS Trigger: AGAAGGCTCTGGAGGATATCAGGAACATAGTAGCAT...AGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAGATGGGCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTCAGGGCTTCTTCTCTTaGTCCTCTGAGCCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRGRQISLRMVVSHHVVAQGFFS*SSEPLS Trigger: AGAGAGAGGCTCAGAGGATCAAGAGAAGAAGCCCTG...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTCTTGGCTCTCCCAACTaGGTTTGGTACTGGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RRGRQISLRMVVSHHVVALGSPN*VWYWFR Trigger: TCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAG...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTTTCTGCACTCCTCCACATaGCTGCCTTTCAGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: YLLHRLGEDGTVSSVCFFLHSST*LPFREA Trigger: TGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAG...AAAGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| 3UTR-3UTR GCA 90 bp | CTGCGTGAAGAACAGGTCGCCTCCCTTGAAGTCATCATTGAGGTAGAGGAGTCCCTTATTAGAAGCAGTTaGTCTGCACTCCTCCACATG | + |
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Preference number: 2 (lower is better) Translates to: LREEQVASLEVIIEVEESLIRSS*SALLHM Trigger: CATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAG...GGACTCCTCTACCTCAATGATGACTTCAAGGGAGGCGACCTGTTCTTCACGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGCCTTCCCAAGTTGAGTaGCCTGATCCTGAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VFLIRSSCSALLHMPAFQPSQVE*PDPEKQ Trigger: CTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGG...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGATGCTACTATGTTCCTaGTATCCTCCAGAGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VFLIRSSCSALLHMPAFQMLLCS*YPPEPS Trigger: AGAAGGCTCTGGAGGATATCAGGAACATAGTAGCAT...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGGAGGCATAATGGTAGACTTGGCATaGTACTATGTTCCTGATATC | + |
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Preference number: 2 (lower is better) Translates to: IRSSCSALLHMPAFQGGIMVDLA*YYVPDI Trigger: GATATCAGGAACATAGTAGCATGCCAAGTCTACCAT...TATGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCAATGGTAGACTTGGCATaGTACTATGTTCCTGATATC | + |
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Preference number: 2 (lower is better) Translates to: EPSLQPLCVFLIRSSCSAMVDLA*YYVPDI Trigger: GATATCAGGAACATAGTAGCATGCCAAGTCTACCAT...TGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATTTATTATATGTAAGTACACTGTTGCTGTCCTCAGACGCCCCAGAAGACTTATTAGAAGCAGTTaGTCTGCACTCCTCCACATG | + |
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Preference number: 2 (lower is better) Translates to: YLFIICKYTVAVLRRPRRLIRSS*SALLHM Trigger: CATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAG...TCTTCTGGGGCGTCTGAGGACAGCAACAGTGTACTTACATATAATAAATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| 3UTR GCA 72 bp | GTCCACTCCTGTTCACTGTGCTCAGGTGCCCACGTGTaGCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTC | + |
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Preference number: 3 (lower is better) Translates to: VHSCSLCSGAHV*HSARAQRRPRV Trigger: GACTCGGGGACGGCGCTGTGCCCTAGCACTGTGGCACACGTGGGCACCTGAGCACAGTGAACAGGAGTGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CCA 72 bp | TGGGGACCTTGCAGGTCCCTCAGCTGGGGCCAGACCTaGCTCCCGGGCCTGATGTGCTGTAGGCTAAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: WGPCRSLSWGQT*LPGLMCCRLSL Trigger: CAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGGTCCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| 3UTR CCA 72 bp | GACTATGAGGAGAGCGGCGGCCACGGTAGCCTGACCTaGCTCCAGCCTGTGCTGCATCCTTGGCCAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: DYEESGGHGSLT*LQPVLHPWPAA Trigger: TGCAGCTGGCCAAGGATGCAGCACAGGCTGGAGCCAGGTCAGGCTACCGTGGCCGCCGCTCTCCTCATAGTC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR TCA 72 bp | CTCGCTCCGACCCATTCAGCTGCTGGGCGTCCTGCGTaGGGGTCACACCCTCCATCAGAAGGGCATCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LAPTHSAAGRPA*GSHPPSEGHPS Trigger: GGAAGGATGCCCTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 72 bp | ACAGCTCGCTCCGACCCATTCAGCTGCTGGGCGTCCTaGGTGAGGGTCACACCCTCCATCAGAAGGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: TARSDPFSCWAS*VRVTPSIRRAS Trigger: GGATGCCCTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTAGTCCCAGGTCAGGTCTaGGCTCTCCCAACTGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: RSLSWGQTWLPGLMCCRLVPGQV*ALPTEF Trigger: AAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGAC...TAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR TCA 72 bp | CAGCCCATACACCATGGGGATTCTCACCACCAGAGCTaGAGGCCACAAGGCGCCCACACCGAGGACGGACCT | + |
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Preference number: 3 (lower is better) Translates to: QPIHHGDSHHQS*RPQGAHTEDGP Trigger: AGGTCCGTCCTCGGTGTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGAATCCCCATGGTGTATGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 72 bp | AGCCCATCTAAGACAGCTCGCTCCGACCCATTCAGCTaGTGGGCGTCCTGCGTGAGGGTCACACCCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: SPSKTARSDPFS*WASCVRVTPSI Trigger: GATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAGATGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR CCA 72 bp | CCATCTAAGACAGCTCGCTCCGACCCATTCAGCTGCTaGGCGTCCTGCGTGAGGGTCACACCCTCCATCAGA | + |
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Preference number: 3 (lower is better) Translates to: PSKTARSDPFSC*ASCVRVTPSIR Trigger: TCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCGGAGCGAGCTGTCTTAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| 3UTR GCA 72 bp | CTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTaGTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSWGQTWLPGLM*CRLSLCSKLVS Trigger: ACTCACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| 3UTR CCA 72 bp | CTCCTGGACTCGCTGAAGCTTGTGACTTGGGGGTTCTaGGGAAGGGTCTCTGCTGAGAATGTCTTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLDSLKLVTWGF*GRVSAENVFLL Trigger: GAGGAGGAAGACATTCTCAGCAGAGACCCTTCCCCAGAACCCCCAAGTCACAAGCTTCAGCGAGTCCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR CCA 72 bp | CCCAGCTTTCTCCTGGACTCGCTGAAGCTTGTGACTTaGGGGTTCTGGGGAAGGGTCTCTGCTGAGAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSFLLDSLKLVT*GFWGRVSAENV Trigger: GACATTCTCAGCAGAGACCCTTCCCCAGAACCCCCAAGTCACAAGCTTCAGCGAGTCCAGGAGAAAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR TCA 72 bp | AATATAACTGTCTCTTCTCTCCGAGGGAGCGAAGGATaGACCGCTGGATGTCCTCTCGTGGTCCCAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NITVSSLRGSEG*TAGCPLVVPGQ Trigger: CTGACCTGGGACCACGAGAGGACATCCAGCGGTTCATCCTTCGCTCCCTCGGAGAGAAGAGACAGTTATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTCAGTTCCTTCCCAAGTaGAGTGGCCTGATCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRGRQISLRMVVSHHVVAQFLPK*SGLILR Trigger: TCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTG...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCTGGTTCAGAGCCTTTTaGGCAGCCTCATCCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSSPSVCFLLEAVALHSSWFRAF*AASSSG Trigger: CCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCA...GGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR GCA 72 bp | CTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTaGTCTGCACTCCTCCACATGCCTGCCTTTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQPLCVFLIRSS*SALLHMPAFQG Trigger: TCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| 3UTR CCA 72 bp | CTCCCAACTGAGTTTGGTACTGGTTCAGAGCCTTTTTaGCAGCCTCATCCTCTGGGTAGAAGAGCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: LPTEFGTGSEPF*QPHPLGRRAGH Trigger: GTGTCCTGCTCTTCTACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCTCCCAACTGAGTTaGGTACTGGTTCAGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSLSQLS*VLVQSL Trigger: AAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAG...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| 3UTR TCA 72 bp | CCCCGAGATGGTAGACTTGGCATGCTACTATGTTCCTaGTATCCTCCAGAGCCTTCTCATCAGTTCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PRDGRLGMLLCS*YPPEPSHQFLP Trigger: GGGAAGGAACTGATGAGAAGGCTCTGGAGGATATCAGGAACATAGTAGCATGCCAAGTCTACCATCTCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCATGATCATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTCAGTTCCTTCCCAAGTaGAGTGGCCTGATCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHDHYLLHRLGEDGTVSSQFLPK*SGLILR Trigger: TCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTG...AGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTAGCGGCCACGGTAGCCTaGCCTGGCTCCAGCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWGQTWLPGLMCCRLAATVA*PGSSLC Trigger: GCACAGGCTGGAGCCAGGTCAGGCTACCGTGGCCGC...TAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTTCTCACCACCAGAGCTaGAGGCCACAAGGCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCSHHQS*RPQGAH Trigger: GTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGA...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTTCGATAGGTGTAGGCTaGGGGCTCCCGCCAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCSIGVG*GLPPAF Trigger: GAATGCTGGCGGGAGCCCCCAGCCTACACCTATCGA...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | TCATCAGTTCCTTCCCAAGTTGAGTGGCCTGATCCTGAGAAGCAGGCTCAGCCAGACCCCGGTGACAACTaGGCCAGGCCCGGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVPSQVEWPDPEKQAQPDPGDN*ARPGGS Trigger: CGAGCCCCCGGGCCTGGCTCAGTTGTCACCGGGGTC...TGGCTGAGCCTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTGATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCGACCCCGGTGACAACTaGGCCAGGCCCGGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSDPGDN*ARPGGS Trigger: CGAGCCCCCGGGCCTGGCTCAGTTGTCACCGGGGTC...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR TCA 90 bp | CCGGGCCTGATGTGCTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGAGTCCAGGGCACCGAGGACGGACCTaGGCCGTGACAGTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGLMCCRLSLCSKLVSPGHRGRT*AVTVRA Trigger: CGCCCTCACTGTCACGGCTCAGGTCCGTCCTCGGTG...CCCTGGACTCACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | CACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATACACCATGGGGACTGAGGAGGAAGTCCTaGACAGGGAAGCTGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HSARAQRRPRVTAHTPWGLRRKS*TGKLRP Trigger: TGGTCGCAGCTTCCCTGTCCAGGACTTCCTCCTCAG...TCCCCATGGTGTATGGGCTGTGACTCGGGGACGGCGCTGTGCCCTAGCACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTAGGCAGCCTCATCCTCTaGGTAGAAGAGCAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWGQTWLPGLMCCRLGSLIL*VEEQDT Trigger: AGTGTCCTGCTCTTCTACCCAGAGGATGAGGCTGCC...TAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTACATTTTCCATGGCCTaGGACATGTTCCCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCTFSMA*DMFPTA Trigger: TGCAGTGGGGAACATGTCTCAGGCCATGGAAAATGT...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCAGCTCGGCAGCTCTCCATGTaGGCCAGGCTCCCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGIVIFVCPGDLAGPSARQLSM*ARLPCR Trigger: CCTGCAGGGGAGCCTGGCCCACATGGAGAGCTGCCG...AGCTGAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTACTTGGCTCTCCCAACTaGGTTTGGTACTGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWGQTWLPGLMCCRLLGSPN*VWYWFR Trigger: TCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAG...TAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | CTCTGGACCTCAGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGGGGCGTTGGGCTGCGTaGAGAACAGGTCGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWTSEEQSVLLTAEPSLQGRWAA*RTGRLP Trigger: AGGGAGGCGACCTGTTCTTCACGCAGCCCAACGCCC...CTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTGAGGTCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCACCCCACCCAGATGCCCTTAGCTCCTGGGGTGACAAATAAGCAGAGAGTTCCCCACTGCACCTaGGCATACGCCTCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAHPTQMPLAPGVTNKQRVPHCT*AYASCS Trigger: GCTGCACGAGGCGTATGCTCAGGTGCAGTGGGGAAC...TCTCTGCTTATTTGTCACCCCAGGAGCTAAGGGCATCTGGGTGGGGTGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | TCATCAGTTCCTTCCCAAGTTGAGTGGCCTGATCCTGAGAAGCAGGCTCAGCCACCTGGACAGGGAAGCTaGGACCAGGACGGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVPSQVEWPDPEKQAQPPGQGS*DQDGWP Trigger: CGGCCACCCGTCCTGGTCGCAGCTTCCCTGTCCAGG...TGGCTGAGCCTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCCTGGACAGGGAAGCTaGGACCAGGACGGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSPGQGS*DQDGWP Trigger: CGGCCACCCGTCCTGGTCGCAGCTTCCCTGTCCAGG...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCAGCTCCCGGAGACAGGATGTaGGGCTCCGAGGAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGGIVIFVCPGDLAGPSAPGDRM*GSEELG Trigger: TCCCAGCTCCTCGGAGCCCCACATCCTGTCTCCGGG...AGCTGAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCCGGCAGCTCTCCATGTaGGCCAGGCTCCCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HACLSGRHSDFCLSWGPCRQLSM*ARLPCR Trigger: CCTGCAGGGGAGCCTGGCCCACATGGAGAGCTGCCG...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCTCCCGGGCCTGATGTGCTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGGCATCCTTGGCCAGCTaGAGCAGAACCCCACACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TWLPGLMCCRLSLCSKLVASLAS*SRTPHS Trigger: CGAGTGTGGGGTTCTGCTGCAGCTGGCCAAGGATGC...CACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGAGCAAGTCGGGGGCCTaGGGAGGCGACCCCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFLLEAVALHSSTCLPFRSKSGA*GGDPGD Trigger: GTCACCGGGGTCGCCTCCCCAGGCCCCCGACTTGCT...CCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCAGCTTGCAGCCGTCTCAGCTaGCTGAGGAGGAAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGIVIFVCPGDLAGPSACSRLS*LRRKSW Trigger: CCAGGACTTCCTCCTCAGCCAGCTGAGACGGCTGCA...AGCTGAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCGACCCATTCAGCTGCTaGGCGTCCTGCGTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HACLSGRHSDFCLSWGPCDPFSC*ASCVRV Trigger: GACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTC...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGGACCTCAGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCACGGTAGCCTGACCTaGCTCCAGCCTGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWTSEEQSVLLTAEPSLQHGSLT*LQPVLH Trigger: ATGCAGCACAGGCTGGAGCCAGGTCAGGCTACCGTG...CTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTGAGGTCCAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | GCTCTCCCAACTGAGTTTGGTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTGCCGTCTCAGCTGGCTaGGGAGGAAGTCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPTEFGTGSEPFWQPHPAVSAG*GGSPGQ Trigger: CTGTCCAGGACTTCCTCCTCAGCCAGCTGAGACGGC...AGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATGATCATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTCCTGCCCGGGCCAGCTaGGCAGCCTTGAGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHDHYLLHRLGEDGTVSSPARAS*AALSTV Trigger: CACGGTGCTCAAGGCTGCTCAGCTGGCCCGGGCAGG...AGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCAAGGGCTTCTGCTGTaGAGGCTGATGGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSQGLLL*RLMVPG Trigger: CCCTGGGACCATCAGCCTCCACAGCAGAAGCCCTTG...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | ATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGGAGGCATAAAGCAGCTTAGCGCCTaGCCTGCCCACAGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSSCSALLHMPAFQGGIKQLSA*PAHSPC Trigger: GCAGGGACTGTGGGCAGGCCAGGCGCTAAGCTGCTT...TATGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| 3UTR CAA 72 bp | ACCGCTGGATGTCCTCTCGTGGTCCCAGGTCAGGTCTaGGCTCTCCCAACTGAGTTTGGTACTGGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGCPLVVPGQV*ALPTEFGTGSE Trigger: CTCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGACCACGAGAGGACATCCAGCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCAGGGCATCCTTCCAGTaGGCCAAGGGCTTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSRASFQ*AKGFCC Trigger: ACAGCAGAAGCCCTTGGCTCACTGGAAGGATGCCCT...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | ATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGGAGGCATAGGCACACCAGGTGGGTaGAGGAAAGATGCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSSCSALLHMPAFQGGIGTPGG*RKDAVA Trigger: GGCCACTGCATCTTTCCTTCACCCACCTGGTGTGCC...TATGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR GCA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCCCACACAGTGCTGCCTaGACTGCAGAACCCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HACLSGRHSDFCLSWGPCPHSAA*TAEPVS Trigger: GGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGG...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTCCACACAGTGCTGCCTaGACTGCAGAACCCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGRQISLRMVVSHHVVAPHSAA*TAEPVS Trigger: GGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGG...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCTGGGTGAAGGAAAGATaGAGTGGCCGTTCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HACLSGRHSDFCLSWGPCWVKER*SGRSGE Trigger: CTCCCCGGAACGGCCACTGCATCTTTCCTTCACCCA...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCGTGAGGGCGTTGGGCTaGGTGAAGAACAGGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPSVCFLLEAVALHSSVRALG*VKNRSP Trigger: AGGCGACCTGTTCTTCACGCAGCCCAACGCCCTCAC...GGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR GCA 90 bp | ATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGGAGGCATATCAGGTGCCCACGTGTaGCACAGTGCTAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSSCSALLHMPAFQGGISGAHV*HSARAQ Trigger: CTGTGCCCTAGCACTGTGGCACACGTGGGCACCTGA...TATGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | ATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTAGCAAGTCGGGGGCCTaGGGAGGCGACCCCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIYCTGWERMGLSPLCVSSKSGA*GGDPGD Trigger: GTCACCGGGGTCGCCTCCCCAGGCCCCCGACTTGCT...AGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGCCCGGAGACAGGATGTaGGGCTCCGAGGAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFLLEAVALHSSTCLPFRPGDRM*GSEELG Trigger: TCCCAGCTCCTCGGAGCCCCACATCCTGTCTCCGGG...CCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CCA 90 bp | TGTCTCTTCTCTCCGAGGGAGCGAAGGATGAACCGCTGGATGTCCTCTCGTGGTTCCAGTGTCCTGCAATaGCTTCATACAGGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLFSPRERRMNRWMSSRGSSVLQ*LHTGLP Trigger: AGGGAGGCCTGTATGAAGCCATTGCAGGACACTGGA...ACCACGAGAGGACATCCAGCGGTTCATCCTTCGCTCCCTCGGAGAGAAGAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCAGGTCCCGGAAGCTCTaGGGTCGGATTGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPSVCFLLEAVALHSSRSRKL*GRIADI Trigger: GATGTCTGCAATCCGACCCCAGAGCTTCCGGGACCT...GGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCTCATACAGGCCTCCCTaGCTCCCTTCTCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRHSDFCLSWGPCRSLSYRPP*LPSPSS Trigger: AGAAGAGGGAGAAGGGAGCCAGGGAGGCCTGTATGA...GAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTAAGTACACTGTTGCTGTCCTCAGACGCCCCAGAAGAGGGCGCCAGCTGAGGAGGAAGTCCTaGACAGGGAAGCTGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVLRRPRRGRQLRRKS*TGKLRP Trigger: TGGTCGCAGCTTCCCTGTCCAGGACTTCCTCCTCAG...CTGGCGCCCTCTTCTGGGGCGTCTGAGGACAGCAACAGTGTACTTACATATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCCTGTGCTGCATCCTTaGCCAGCTGCAGCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQPLCVFLIRSSCSALLPVLHP*PAAAEP Trigger: GGGTTCTGCTGCAGCTGGCCAAGGATGCAGCACAGG...GAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CCA 90 bp | CCGGGCCTGATGTGCTGTAGGCTAAGTCTGTGTAGCAAGCTTGTGAGTCCAGGGCTTGTTCACCTTCTATaGCACTTCGGCACACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLMCCRLSLCSKLVSPGLVHLL*HFGTPG Trigger: ACCTGGTGTGCCGAAGTGCCATAGAAGGTGAACAAG...CCCTGGACTCACAAGCTTGCTACACAGACTTAGCCTACAGCACATCAGGCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCGTGACTTGGGGGTTCTaGGGAAGGGTCTCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPSVCFLLEAVALHSSVTWGF*GRVSAE Trigger: CTCAGCAGAGACCCTTCCCCAGAACCCCCAAGTCAC...GGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGGCGCCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTTCTCTTGATCCTCTCTaGGCCTCTCTCTCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRGRQISLRMVVSHHVVASLDPL*ASLSVP Trigger: AGGCACTGAGAGAGAGGCTCAGAGAGGATCAAGAGA...AGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCGGGAAGGGTCTCTGCTaGGAATGTCTTCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSGKGLC*ECLPPL Trigger: AAGAGGAGGAAGACATTCTCAGCAGAGACCCTTCCC...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR GCA 90 bp | TCATCAGTTCCTTCCCAAGTTGAGTGGCCTGATCCTGAGAAGCAGGCTCAGCCACACAAAGAAGGTGTGTaGTGCAGAAGCTGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPSQVEWPDPEKQAQPHKEGV*CRSCQV Trigger: GACCTGGCAGCTTCTGCAGCACACACCTTCTTTGTG...TGGCTGAGCCTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCTCTGCCACACAGTGCTaGCTGCACTGCAGAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLQPLCVFLIRSSCSALSATQC*LHCRTR Trigger: ACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGA...GAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCAAGGTCCCGGAAGCTCTaGGGTCGGATTGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQPLCVFLIRSSCSARSRKL*GRIADI Trigger: GATGTCTGCAATCCGACCCCAGAGCTTCCGGGACCT...TGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGTGCAGCCGTCTCAGCTaGCTGAGGAGGAAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLLEAVALHSSTCLPFRCSRLS*LRRKSW Trigger: CCAGGACTTCCTCCTCAGCCAGCTGAGACGGCTGCA...CCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCGGTTCAGAGCCTTTTTaGCAGCCTCATCCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRHSDFCLSWGPCRSGSEPF*QPHPLG Trigger: ACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACC...GGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| 3UTR CAA 72 bp | TATCCTCCAGAGCCTTCTCATCAGTTCCTTCCCAAGTaGAGTGGCCTGATCCTGAGAAGCAGGCTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPPEPSHQFLPK*SGLILRSRLSH Trigger: ATGGCTGAGCCTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTGATGAGAAGGCTCTGGAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTCAGAAGAGCAGTCAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPQKSSQCS Trigger: AGAGCACTGACTGCTCTTCTGAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTTTGCCGTCTCAGCTGGCTaGGGAGGAAGTCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLHRLGEDGTVSSVCFFAVSAG*GGSPGQ Trigger: CTGTCCAGGACTTCCTCCTCAGCCAGCTGAGACGGC...AAAGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR GCA 90 bp | GCTCTCCCAACTGAGTTTGGTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTCACAAAGAAGGTGTGTaGTGCAGAAGCTGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPTEFGTGSEPFWQPHPHKEGV*CRSCQV Trigger: GACCTGGCAGCTTCTGCAGCACACACCTTCTTTGTG...AGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | CCTCATGATCATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTTCTTCAGCCCCTTGGTaGTCCTCAGGCCCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHDHYLLHRLGEDGTVSSSSAPW*SSGPSQ Trigger: CTGTGAGGGGCCTGAGGAGCACCAAGGGGCTGAAGA...AGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS-3UTR GCA 90 bp | ATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGGAGGCATACCGTATCCAGTGTCCTaGAATGGCTTCATACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSSCSALLHMPAFQGGIPYPVS*NGFIQA Trigger: GGCCTGTATGAAGCCATTGCAGGACACTGGATACGG...TATGCCTCCCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCAGAGCCTCTCTCTCAGTaGCTTAGGGATGAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQPLCVFLIRSSCSAEPLSQ*LRDESL Trigger: GAGGCTCTCATCCCTAAGGCACTGAGAGAGAGGCTC...TGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR GCA 90 bp | ATTATATGTAAGTACACTGTTGCTGTCCTCAGACGCCCCAGAAGAGGGCGCCAGCAGGACACAGTTGTCTaGATGAACCGGGTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVLRRPRRGRQQDTVV*MNRVTQ Trigger: CTGAGTCACCCGGTTCATGCAGACAACTGTGTCCTG...CTGGCGCCCTCTTCTGGGGCGTCTGAGGACAGCAACAGTGTACTTACATATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR GCA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGTTCACTGTGCTCAGGTaGCCACGTGTGCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFLIRSSCSALLHMPAFQFTVLR*PRVPQC Trigger: GCACTGTGGCACACGTGGGCACCTGAGCACAGTGAA...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CCA 90 bp | CAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCAGGTCCCTCAGCTCATCTGCAGGTGTGTTaGGTTTGCCACAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGIVIFVCPGDLAGPSAHLQVC*VCHKEG Trigger: ACCTTCTTTGTGGCAAACCCAACACACCTGCAGATG...AGCTGAGGGACCTGCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTCCTGCAGCAGCTCTTTaGCTTCTGTCCACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HMPAFQGGIVIFVCPGDLPAAAL*LLSTPV Trigger: AACAGGAGTGGACAGAAGCCAAAGAGCTGCTGCAGG...AAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR TCA 90 bp | TCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCAGGGCTTCTTCTCTTaGTCCTCTCTGAGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQPLCVFLIRSSCSALLQGFFS*SSLSLS Trigger: AGAGAGGCTCAGAGAGGATCAAGAGAAGAAGCCCTG...GAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR GCA 90 bp | CCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCGTGTGCTGCAGAAGCTaGCAGGTCCAGCTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLQPLCVFLIRSSCSALVCCRS*QVQLLQ Trigger: TTGAAGAAGCTGGACCTGGCAGCTTCTGCAGCACAC...GAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCGTGTGCTGCAGAAGCTaGCAGGTCCAGCTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQPLCVFLIRSSCSALLVCCRS*QVQLLQ Trigger: TTGAAGAAGCTGGACCTGGCAGCTTCTGCAGCACAC...GAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR GCA 90 bp | CCTCATGATCATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTTCTGCCACACAGTGCTaGCTGCACTGCAGAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHDHYLLHRLGEDGTVSSSATQC*LHCRTR Trigger: ACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGA...AGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CCA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGTCATACAGGCCTCCCTaGCTCCCTTCTCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLIRSSCSALLHMPAFQSYRPP*LPSPSS Trigger: AGAAGAGGGAGAAGGGAGCCAGGGAGGCCTGTATGA...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CCA 90 bp | TCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCTCCAGTGTCCTGCAATaGCTTCATACAGGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQPLCVFLIRSSCSALLSSVLQ*LHTGLP Trigger: AGGGAGGCCTGTATGAAGCCATTGCAGGACACTGGA...GAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTCTCCAGCCCCTCTGTGTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTTCGGCACACCAGGTaGGTGAAGGAAAGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLQPLCVFLIRSSCSALLRHTR*VKERCS Trigger: ACTGCATCTTTCCTTCACCCACCTGGTGTGCCGAAG...GAGTGCAGAGCAACTGCTTCTAATAAGAAACACACAGAGGGGCTGGAGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGCCGTATCCAGTGTCCTaGAATGGCTTCATACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLLEAVALHSSTCLPFRPYPVS*NGFIQA Trigger: GGCCTGTATGAAGCCATTGCAGGACACTGGATACGG...CCTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR GCA 90 bp | TATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTTTCACTCCTGTTCACTGTaGTCAGGTGCCCACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLHRLGEDGTVSSVCFFHSCSL*SGAHVC Trigger: GCACACGTGGGCACCTGAGCACAGTGAACAGGAGTG...AAAGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CCA 90 bp | TATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTTTTCTTCTGAAGCTTGTGACTTaGGGGTTCTGGGGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YCTGWERMGLSPLCVSFLLKLVT*GFWGRV Trigger: GACCCTTCCCCAGAACCCCCAAGTCACAAGCTTCAG...AAGAAAAGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CCA 90 bp | CCTCATGATCATTATTTATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGAAGGAAAGATGCAGTaGCCGTTCCGGGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHDHYLLHRLGEDGTVSSEGKMQ*PFRGEV Trigger: TACTTCTCCCCGGAACGGCCACTGCATCTTTCCTTC...AGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| 3UTR CAA 72 bp | GCTGGAGAGCCTCATGATCATTATTTATTGCACAGGTaGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGEPHDHYLLHR*GEDGTVSSVCF Trigger: GAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATAAATAATGATCATGAGGCTCTCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS CCA 90 bp | GCCTCCGCACCGCGCACTGGGTCAGGCACTCGGCGCGGCGGAGCGTaGCGCGCAGGAGCAGCGGTTCCCAGACCCCGGGCCCGGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ASAPRTGSGTRRGGA*RAGAAVPRPRARRQ Trigger: CTGTCTCCGGGCCCGGGGTCTGGGAACCGCTGCTCCTGCGCGCCACGCTCCGCCGCGCCGAGTGCCTGACCCAGTGCGCGGTGCGGAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTGTGACAGTGAGGGCGTaGGGCTGCGTGAAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCVTVRA*GCVKNR Trigger: CCTGTTCTTCACGCAGCCCAACGCCCTCACTGTCAC...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS GCA 90 bp | GAAGTCCTGGACAGGGAAGCTGCGACCAGGACGGGTGGCCGTGTCTaGCACACAGTGCTGCCTGCACTGCAGAACCCGTATCCAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVLDREAATRTGGRV*HTVLPALQNPYPVS Trigger: GGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAGCTTCCCTGTCCAGGACTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCAGGTCCCTCAGCTGGGGCCAGACCTGGCTCCCGGGCCTGATGTGCTGTTGGTTCAGAGCCTTTTaGGCAGCCTCATCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCRSLSWGQTWLPGLMCCWFRAF*AASSSG Trigger: CCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCA...ACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCCCAGCTGAGGGACCTGCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
||
| CDS GCA 90 bp | GGGAAGCTGCGACCAGGACGGGTGGCCGTGTCTGCCACACAGTGCTaGCTGCACTGCAGAACCCGTATCCAGTGTCCTGCAATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKLRPGRVAVSATQC*LHCRTRIQCPAMAS Trigger: TGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAGCTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS GCA 90 bp | ACAGGGAAGCTGCGACCAGGACGGGTGGCCGTGTCTGCCACACAGTaGTGCCTGCACTGCAGAACCCGTATCCAGTGTCCTGCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TGKLRPGRVAVSATQ*CLHCRTRIQCPAMA Trigger: AGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAGCTTCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
||
| CDS GCA 90 bp | CGACCAGGACGGGTGGCCGTGTCTGCCACACAGTGCTGCCTGCACTaGAGAACCCGTATCCAGTGTCCTGCAATGGCTTCATACAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPGRVAVSATQCCLH*RTRIQCPAMASYRP Trigger: AGGCCTGTATGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 90 bp | AGCTGCGACCAGGACGGGTGGCCGTGTCTGCCACACAGTGCTGCCTaGACTGCAGAACCCGTATCCAGTGTCCTGCAATGGCTTCATACA | + |
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Preference number: 5 (lower is better) Translates to: SCDQDGWPCLPHSAA*TAEPVSSVLQWLHT Trigger: TGTATGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CAA 90 bp | ACCATGGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACACCGAGGGCAGGTGTGTTGGGTTaGCCACAAAGAAGGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: TMGILTTRAEGHKAPTPRAGVLG*PQRRCV Trigger: CACACACCTTCTTTGTGGCAAACCCAACACACCTGC...CCTCGGTGTGGGCGCCTTGTGGCCTTCAGCTCTGGTGGTGAGAATCCCCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| CDS-3UTR CAA 90 bp | CGACCCATTCAGCTGCTGGGCGTCCTGCGTGAGGGTCACACCCTCCATCAGAAGGCATCTGCAGGTGTGTaGGGTTTGCCACAAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RPIQLLGVLREGHTLHQKASAGV*GLPQRR Trigger: CCTTCTTTGTGGCAAACCCAACACACCTGCAGATGC...CTTCTGATGGAGGGTGTGACCCTCACGCAGGACGCCCAGCAGCTGAATGGGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135127.8 |
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| CDS CCA 90 bp | CACAGTGCTGCCTGCACTGCAGAACCCGTATCCAGTGTCCTGCAATaGCTTCATACAGGCCTCCCTGGCTCCCTTCTCCCTCTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HSAACTAEPVSSVLQ*LHTGLPGSLLPLLQ Trigger: CTGAAGAAGAGGGAGAAGGGAGCCAGGGAGGCCTGTATGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CAA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCCTCTTCTTCAGCCCCTaGGTGCTCCTCAGGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: HACLSGRHSDFCLSWGPCLFFSP*VLLRPL Trigger: GAGGGGCCTGAGGAGCACCAAGGGGCTGAAGAAGAG...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 90 bp | CTCCATCAGAAGGGCATCCTTCCAGTGAGCCAAGGGCTTCTGCTGTaGAGGCTGATGGTCCCAGGGCTTCTTCTCTTGATCCTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LHQKGILPVSQGLLL*RLMVPGLLLLILSE Trigger: CTCAGAGAGGATCAAGAGAAGAAGCCCTGGGACCATCAGCCTCCACAGCAGAAGCCCTTGGCTCACTGGAAGGATGCCCTTCTGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS GCA 90 bp | TTCCCGCATCTGCAGGTGTGTTGGGTTTGCCACAAAGAAGGTGTGTaGTGCAGAAGCTGCCAGGTCCAGCTTCTTCAACTGGTAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: FPHLQVCWVCHKEGV*CRSCQVQLLQLVVG Trigger: GCCTACTACCAGTTGAAGAAGCTGGACCTGGCAGCTTCTGCAGCACACACCTTCTTTGTGGCAAACCCAACACACCTGCAGATGCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS-3UTR CAA 90 bp | CATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCCAAGAATCCGGGTCCTaGAAGCTAGTGCCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: HACLSGRHSDFCLSWGPCQESGS*KLVPRC Trigger: GCATCTGGGCACTAGCTTCAAGGACCCGGATTCTTG...GCAAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | TCATCAGTTCCTTCCCAAGTTGAGTGGCCTGATCCTGAGAAGCAGGCTCAGCCAGCAGGTGTGTTGGGTTaGCCACAAAGAAGGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSVPSQVEWPDPEKQAQPAGVLG*PQRRCV Trigger: CACACACCTTCTTTGTGGCAAACCCAACACACCTGC...TGGCTGAGCCTGCTTCTCAGGATCAGGCCACTCAACTTGGGAAGGAACTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 90 bp | GTCTTGGCTCTCCCAACTGAGTTTGGTACTGGTTCAGAGCCTTTTTaGCAGCCTCATCCTCTGGGTAGAAGAGCAGGACACTCAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: VLALPTEFGTGSEPF*QPHPLGRRAGHSGH Trigger: ATGTCCTGAGTGTCCTGCTCTTCTACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAGCCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | CACATGCCTGCCTTTCAGGGAGGCATAGTGATTTTTGTCTGTCCTGGGGACCTTGCATCTGCAGGTGTGTaGGGTTTGCCACAAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: HMPAFQGGIVIFVCPGDLASAGV*GLPQRR Trigger: CCTTCTTTGTGGCAAACCCAACACACCTGCAGATGC...AAGGTCCCCAGGACAGACAAAAATCACTATGCCTCCCTGAAAGGCAGGCATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 90 bp | CGGATTGCAGACATCCTTCTGTACTTAGCCATGTCTTCCCGCATCTaGAGGTGTGTTGGGTTTGCCACAAAGAAGGTGTGTGCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RIADILLYLAMSSRI*RCVGFATKKVCAAE Trigger: TTCTGCAGCACACACCTTCTTTGTGGCAAACCCAACACACCTGCAGATGCGGGAAGACATGGCTAAGTACAGAAGGATGTCTGCAATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 90 bp | CTGAGTTTGGTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTCTaGGTAGAAGAGCAGGACACTCAGGACATTTTCCATGGCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LSLVLVQSLFGSLIL*VEEQDTQDIFHGLR Trigger: TCTCAGGCCATGGAAAATGTCCTGAGTGTCCTGCTCTTCTACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTACCAAACTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGTCCCAGGTCAGGTCTaGGCTCTCCCAACTGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VFLIRSSCSALLHMPAFQVPGQV*ALPTEF Trigger: AAACTCAGTTGGGAGAGCCAAGACCTGACCTGGGAC...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | TATTGCACAGGTTGGGAGAGGATGGGACTGTCTCCTCTGTGTGTTTCTTTTCTTGCTGAAGCTTGTGACTaGGGGGTTCTGGGGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: YCTGWERMGLSPLCVSFLAEACD*GVLGKG Trigger: ACCCTTCCCCAGAACCCCCAAGTCACAAGCTTCAGC...AAGAAAAGAAACACACAGAGGAGACAGTCCCATCCTCTCCCAACCTGTGCAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGCTCTCCCAACTGAGTTaGGTACTGGTTCAGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VFLIRSSCSALLHMPAFQLSQLS*VLVQSL Trigger: AAGGCTCTGAACCAGTACCAAACTCAGTTGGGAGAG...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS-3UTR CAA 90 bp | GTGTTTCTTATTAGAAGCAGTTGCTCTGCACTCCTCCACATGCCTGCCTTTCAGGTCCATACGCTGCTCTaGTTCACCTTCTATGGCACT | + |
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Preference number: 5 (lower is better) Translates to: VFLIRSSCSALLHMPAFQVHTLL*FTFYGT Trigger: AGTGCCATAGAAGGTGAACAAGAGCAGCGTATGGAC...CTGAAAGGCAGGCATGTGGAGGAGTGCAGAGCAACTGCTTCTAATAAGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS GCA 72 bp | CGCCCGGCTCCGCAGCGCCTCTCGCAGCAGCGCCACTaGGGGCGCCCAAGCCCCGGCCGAGTAGGCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RPAPQRLSQQRH*GRPSPGRVGSQ Trigger: CTGCGAGCCTACTCGGCCGGGGCTTGGGCGCCCGCAGTGGCGCTGCTGCGAGAGGCGCTGCGGAGCCGGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 72 bp | GGAAGTCCTGGACAGGGAAGCTGCGACCAGGACGGGTaGCCGTGTCTGCCACACAGTGCTGCCTGCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSPGQGSCDQDG*PCLPHSAACTA Trigger: TGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAGCTTCCCTGTCCAGGACTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CGACCAGGACGGGTGGCCGTGTCTGCCACACAGTGCTaGCTGCACTGCAGAACCCGTATCCAGTGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RPGRVAVSATQC*LHCRTRIQCPA Trigger: TGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CTGCGACCAGGACGGGTGGCCGTGTCTGCCACACAGTaGTGCCTGCACTGCAGAACCCGTATCCAGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRPGRVAVSATQ*CLHCRTRIQCP Trigger: AGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTGGTCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CAGGACGGGTGGCCGTGTCTGCCACACAGTGCTGCCTaGACTGCAGAACCCGTATCCAGTGTCCTGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: QDGWPCLPHSAA*TAEPVSSVLQW Trigger: CCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CGGGTGGCCGTGTCTGCCACACAGTGCTGCCTGCACTaGAGAACCCGTATCCAGTGTCCTGCAATGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RVAVSATQCCLH*RTRIQCPAMAS Trigger: TGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGCAGCACTGTGTGGCAGACACGGCCACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | GGGCGTCACCAGGTCCCGGAAGCTCTGGGGTCGGATTaGAGACATCCTTCTGTACTTAGCCATGTCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GRHQVPEALGSD*RHPSVLSHVFP Trigger: CGGGAAGACATGGCTAAGTACAGAAGGATGTCTGCAATCCGACCCCAGAGCTTCCGGGACCTGGTGACGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 72 bp | GCCCAGTATAGGGGCGTCACCAGGTCCCGGAAGCTCTaGGGTCGGATTGCAGACATCCTTCTGTACTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: AQYRGVTRSRKL*GRIADILLYLA Trigger: GGCTAAGTACAGAAGGATGTCTGCAATCCGACCCCAGAGCTTCCGGGACCTGGTGACGCCCCTATACTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 72 bp | GCCTGCACTGCAGAACCCGTATCCAGTGTCCTGCAATaGCTTCATACAGGCCTCCCTGGCTCCCTTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ACTAEPVSSVLQ*LHTGLPGSLLP Trigger: AGGGAGAAGGGAGCCAGGGAGGCCTGTATGAAGCCATTGCAGGACACTGGATACGGGTTCTGCAGTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CTGCAGGTGTGTTGGGTTTGCCACAAAGAAGGTGTGTaGTGCAGAAGCTGCCAGGTCCAGCTTCTTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: LQVCWVCHKEGV*CRSCQVQLLQL Trigger: CAGTTGAAGAAGCTGGACCTGGCAGCTTCTGCAGCACACACCTTCTTTGTGGCAAACCCAACACACCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS GCA 72 bp | CTTCTTCTCTTGATCCTCTCTGAGCCTCTCTCTCAGTaGCTTAGGGATGAGAGCCTCCGGGGTCCAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: LLLLILSEPLSQ*LRDESLRGPRI Trigger: GATTCTTGGACCCCGGAGGCTCTCATCCCTAAGGCACTGAGAGAGAGGCTCAGAGAGGATCAAGAGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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| CDS GCA 72 bp | GACATCCTTCTGTACTTAGCCATGTCTTCCCGCATCTaGAGGTGTGTTGGGTTTGCCACAAAGAAGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: DILLYLAMSSRI*RCVGFATKKVC Trigger: ACACACCTTCTTTGTGGCAAACCCAACACACCTGCAGATGCGGGAAGACATGGCTAAGTACAGAAGGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023958.10 ENSMUST00000135127.8 |
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| CDS CCA 72 bp | GTACTGGTTCAGAGCCTTTTTGGCAGCCTCATCCTCTaGGTAGAAGAGCAGGACACTCAGGACATTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VLVQSLFGSLIL*VEEQDTQDIFH Trigger: ATGGAAAATGTCCTGAGTGTCCTGCTCTTCTACCCAGAGGATGAGGCTGCCAAAAAGGCTCTGAACCAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023958.10 |
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