Pregenerated sensors for P3H2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038168Ensembl transcript IDs: ENSMUST00000039990.6
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAAGAGGAGGCTGCCCAACAGAAGCCATTGAGGTGCAGCCTGTaGGAAACAGCTCTGAATTTATACCAGCAGGAGCCCCTCTCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: QEEEAAQQKPLRCSL*ETALNLYQQEPLSS Trigger: GCTGGAGAGGGGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGCTTCTGTTGGGCAGCCTCCTCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR CCA 90 bp | GTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATTCTTaGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGTAGACACAAGG | + |
|
Preference number: 1 (lower is better) Translates to: VVASSSLKDAVLCDS*DLADCVLGAPVDTR Trigger: CCTTGTGTCTACAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR GCA 90 bp | TTGGCAGACTGTGTCCTGGGAGCTCCTGTAGACACAAGGCAAACTTaGTGTGAAGAGTCTGAACTCTCAGCCAATGGAACCATGAAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: LADCVLGAPVDTRQT*CEESELSANGTMKG Trigger: ACCTTTCATGGTTCCATTGGCTGAGAGTTCAGACTCTTCACAGCAAGTTTGCCTTGTGTCTACAGGAGCTCCCAGGACACAGTCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR GCA 90 bp | ATGTTTATGTTTGTCTTATGTATGTGTGGCGTATTTGGGAGTTTGTaGCATGTGTACATGGCCTGTGTGCACTTCTGTAGTGTAAATTCT | + |
|
Preference number: 1 (lower is better) Translates to: MFMFVLCMCGVFGSL*HVYMACVHFCSVNS Trigger: AGAATTTACACTACAGAAGTGCACACAGGCCATGTACACATGGCACAAACTCCCAAATACGCCACACATACATAAGACAAACATAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGCTAGCTGTGGGGTGCTaGGTGCAGGCTGATCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: MLFSVILGTWQTVSWELLLAVGC*VQADHV Trigger: AACATGATCAGCCTGCACTCAGCACCCCACAGCTAG...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCAGTGGTGTGGAACCATGAAAGGTaGTGGGGGAAAGGCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLTFYPRGPRAIVLNPVVWNHER*WGKGSK Trigger: TTTGCTGCCTTTCCCCCATCACCTTTCATGGTTCCA...CACCACTGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR TCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCACAGCCAATGGAACCATaGAAGGTGATGGGGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPQPMEP*KVMGER Trigger: CCTTTCCCCCATCACCTTTCATGGTTCCATTGGCTG...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR CAA 90 bp | GCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATTCTTGGGACTaGGCAGACTGTGTCCTGGGAGCTCCTGTAGACACAAGGCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: ASSSLKDAVLCDSWD*ADCVLGAPVDTRQT Trigger: AGTTTGCCTTGTGTCTACAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGTGTGCCATGTGTACATaGCCTGTGTGCACTTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: MLFSVILGTWQTVSWELLCAMCT*PVCTSV Trigger: TACAGAAGTGCACACAGGCCATGTACACATGGCACA...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR TCA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCCCAGAAGAAAGCAAATaGAGCGAAGTTGGGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: AIEVQPVRNSSEFIPAGAPEESK*SEVGNR Trigger: CCTGTTCCCAACTTCGCTTCATTTGCTTTCTTCTGG...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCAGTGGTGCAAATGAAGCGAAGTTaGGAACAGGGGGAGAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: VLTFYPRGPRAIVLNPVVQMKRS*EQGEKS Trigger: AGATTTCTCCCCCTGTTCCCAACTTCGCTTCATTTG...CACCACTGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATGACACAAGGCAAACTTaGTGTGAAGAGTCTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: VLNPVVASSSLKDAVLCDDTRQT*CEESEL Trigger: GAGTTCAGACTCTTCACAGCAAGTTTGCCTTGTGTC...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CCA 90 bp | GTAACAAGGATCCCTTTATTAAACACTTCAGACACAGCATGCCTGTGTGAGCTGGTGAACCTACACTGCTaGAACCCCTGTTTAGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VTRIPLLNTSDTACLCELVNLHC*NPCLGV Trigger: GACACCTAAACAGGGGTTCCAGCAGTGTAGGTTCAC...CAGCTCACACAGGCATGCTGTGTCTGAAGTGTTTAATAAAGGGATCCTTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR TCA 90 bp | GTAACAAGGATCCCTTTATTAAACACTTCAGACACAGCATGCCTGTGTGAGCTGTTGAGGTGCAGCCTGTaGGAAACAGCTCTGAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: VTRIPLLNTSDTACLCELLRCSL*ETALNL Trigger: TAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAA...CAGCTCACACAGGCATGCTGTGTCTGAAGTGTTTAATAAAGGGATCCTTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CCA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCCTGTTGCATGTTTACTaGTGTGACATGAAGAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GIRTSFENTSPNILPKGTLLHVY*CDMKSV Trigger: CACACTCTTCATGTCACACCAGTAAACATGCAACAG...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGTTTGTGTATCTGGGTaGTATGTGTTTCTGTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: IVLNPVVASSSLKDAVLCVCVSG*YVFLYV Trigger: AACATACAGAAACACATACCACCCAGATACACAAAC...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR GCA 72 bp | TGCCTGTGTGAGCTGACAGCAGCAGGAAGAGGAGGCTaGCCAACAGAAGCCATTGAGGTGCAGCCTGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLCELTAAGRGG*PTEAIEVQPVR Trigger: TCTCACAGGCTGCACCTCAATGGCTTCTGTTGGGCAGCCTCCTCTTCCTGCTGCTGTCAGCTCACACAGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR TCA 72 bp | GAGGCTGCCCAACAGAAGCCATTGAGGTGCAGCCTGTaGGAAACAGCTCTGAATTTATACCAGCAGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAAQQKPLRCSL*ETALNLYQQEP Trigger: GGGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGCTTCTGTTGGGCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCGCAAATGAAGCGAAGTaGGGAACAGGGGGAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: AIEVQPVRNSSEFIPAGAANEAK*GTGGEI Trigger: GATTTCTCCCCCTGTTCCCAACTTCGCTTCATTTGC...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR GCA 72 bp | TGTGTCCTGGGAGCTCCTGTAGACACAAGGCAAACTTaGTGTGAAGAGTCTGAACTCTCAGCCAATGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: CVLGAPVDTRQT*CEESELSANGT Trigger: GGTTCCATTGGCTGAGAGTTCAGACTCTTCACAGCAAGTTTGCCTTGTGTCTACAGGAGCTCCCAGGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCGTATTTGGGAGTTaGTGCCATGTGTACATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVGVFGS*CHVYMA Trigger: GGCCATGTACACATGGCACAAACTCCCAAATACGCC...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR TCA 72 bp | TGGGGTGCTGAGTGCAGGCTGATCATGTTGATATTCTaGATATGCTGCAAAGTAACTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WGAECRLIMLIF*ICCKVTVCVCV Trigger: CACACACACACACACAGTTACTTTGCAGCATATTCAGAATATCAACATGATCAGCCTGCACTCAGCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR GCA 72 bp | TTTGTCTTATGTATGTGTGGCGTATTTGGGAGTTTGTaGCATGTGTACATGGCCTGTGTGCACTTCTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: FVLCMCGVFGSL*HVYMACVHFCS Trigger: ACTACAGAAGTGCACACAGGCCATGTACACATGGCACAAACTCCCAAATACGCCACACATACATAAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| 3UTR CCA 72 bp | TATGTTTATGTTTGTCTTATGTATGTGTGGCGTATTTaGGAGTTTGTGCCATGTGTACATGGCCTGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YVYVCLMYVWRI*EFVPCVHGLCA Trigger: TGCACACAGGCCATGTACACATGGCACAAACTCCCAAATACGCCACACATACATAAGACAAACATAAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGCTGGCTCTGGCAGCTaGGGGAGCAGCGCGCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DAVLCDSWDLADCVLGAPAGSGS*GSSAPA Trigger: AGCGGGCGCGCTGCTCCCGCAGCTGCCAGAGCCAGC...AGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCAGGCAGCCACGCCGCTaGCGTAGAGCAGGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIEVQPVRNSSEFIPAGARQPRR*RRAGRR Trigger: CCTTCGACCTGCTCTACGCCAGCGGCGTGGCTGCCT...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCACGTCCTCGCTaGCGCGGTGGCGGGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVCARPR*RGGGTR Trigger: CCGCGTCCCGCCACCGCGTCAGCGAGGACGTGCGCA...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCTGGGGGCCGCCCCGCTaGGGTGTGGGCAGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIRTSFENTSPNILPKGTWGPPR*GVGSSS Trigger: GCTACTGCTGCCCACACCGCAGCGGGGCGGCCCCCA...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCTCCCGTAGGCGCCGGTaGCTGCTCAGGGCGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GIRTSFENTSPNILPKGTSRRRR*LLRAAS Trigger: GGAAGCCGCCCTGAGCAGTCACCGGCGCCTACGGGA...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATGGCGGCCTGGGCGGGTaGCGAGTTCCCTCACACATT | + |
|
Preference number: 4 (lower is better) Translates to: VLNPVVASSSLKDAVLCDGGLGG*RVPSHI Trigger: AATGTGTGAGGGAACTCGCCACCCGCCCAGGCCGCC...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCAGTGGTGCCTCCCGGGCCTCAATaGATGCTGGATCAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLTFYPRGPRAIVLNPVVPPGPQ*MLDQCC Trigger: ACAGCACTGATCCAGCATCCATTGAGGCCCGGGAGG...CACCACTGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCATCGAGAAGAACCCGTTaGGTCCCGTTCAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPSRRTR*VPFSCS Trigger: TGAGCAGCTGAACGGGACTCAACGGGTTCTTCTCGA...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | AACCTACACTGCTGGAACCCCTGTTTAGGTGTCCCCTCTTACAGAGCACTGTGGTTCTCATTGGGTGTGTaGGGTGACGTTTTCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NLHCWNPCLGVPSYRALWFSLGV*GDVFPR Trigger: CCGAGGGAAAACGTCACCCCACACACCCAATGAGAA...CCACAGTGCTCTGTAAGAGGGGACACCTAAACAGGGGTTCCAGCAGTGTAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | AACCTACACTGCTGGAACCCCTGTTTAGGTGTCCCCTCTTACAGAGCACTGTGGTCTTGCACTCTTCAGTaGCACCCGGCCTTCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: NLHCWNPCLGVPSYRALWSCTLQ*HPAFIT Trigger: GGTTATGAAGGCCGGGTGCCACTGAAGAGTGCAAGA...CCACAGTGCTCTGTAAGAGGGGACACCTAAACAGGGGTTCCAGCAGTGTAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCCCGCTGCGGTGTaGGCAGCAGTAGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVRPAAV*AAVAAT Trigger: TGTTGCTGCTACTGCTGCCCACACCGCAGCGGGGCG...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | GATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTCTCACACATTCATGCTaGCAGACCAGAACCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DAVLCDSWDLADCVLGAPLTHSC*QTRTCI Trigger: TATGCAGGTTCTGGTCTGTCAGCATGAATGTGTGAG...AGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCATGGATGCTGGATCAGTaGTGTCATCCAGCAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPWMLDQ*CHPADS Trigger: AGAGTCTGCTGGATGACAGCACTGATCCAGCATCCA...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCACAGACAGGGCTGTTCTaGAGACCATGTGTGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPQTGLF*RPCVYR Trigger: CCTATACACACATGGTCTGCAGAACAGCCCTGTCTG...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | AACCTACACTGCTGGAACCCCTGTTTAGGTGTCCCCTCTTACAGAGCACTGTGGGACATCCTCATTGTCTaGATGGAACATCAGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLHCWNPCLGVPSYRALWDILIV*MEHQVG Trigger: GCCTACCTGATGTTCCATCCAGACAATGAGGATGTC...CCACAGTGCTCTGTAAGAGGGGACACCTAAACAGGGGTTCCAGCAGTGTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCTATTCCTCAAATCTCTaGGGCCCCTCACATAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIEVQPVRNSSEFIPAGAYSSNL*GPSHRA Trigger: TGCTCTATGTGAGGGGCCTCAGAGATTTGAGGAATA...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCACCCATTGACAATCCATaGACTTCTGCCCCATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPPIDNP*TSAPSI Trigger: TATGGATGGGGCAGAAGTTCATGGATTGTCAATGGG...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAGTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCAAGTTGTAGACGAAGGTaGTGTTCTCGTAGAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPVLTFYPRGPRAIVLNPSCRRR*CSRRAE Trigger: CTCTGCTCTACGAGAACATCACCTTCGTCTACAACT...TGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGACTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATCAGCAGGCAGTTGTCTaGATGAATGGGGTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNPVVASSSLKDAVLCDQQAVV*MNGVTE Trigger: CTCAGTCACCCCATTCATGCAGACAACTGCCTGCTG...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GTAACAAGGATCCCTTTATTAAACACTTCAGACACAGCATGCCTGTGTGAGCTGCCGGGCCTCAATGGATaGTGGATCAGTGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VTRIPLLNTSDTACLCELPGLNG*WISAVI Trigger: GATGACAGCACTGATCCAGCATCCATTGAGGCCCGG...CAGCTCACACAGGCATGCTGTGTCTGAAGTGTTTAATAAAGGGATCCTTGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGGCCTCAATGGATGCTaGATCAGTGCTGTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVLNPVVASSSLKDAVLCGLNGC*ISAVIQ Trigger: CTGGATGACAGCACTGATCCAGCATCCATTGAGGCC...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GTAACAAGGATCCCTTTATTAAACACTTCAGACACAGCATGCCTGTGTGAGCTGAGTTGTAGGGAACTCTaGGTTGGAAGTCGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTRIPLLNTSDTACLCELSCREL*VGSRCA Trigger: TGCGCAGCGACTTCCAACGCAGAGTTCCCTACAACT...CAGCTCACACAGGCATGCTGTGTCTGAAGTGTTTAATAAAGGGATCCTTGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGGCAATCACTTCATCTaGCTGTATCCGCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVLNPVVASSSLKDAVLCGNHFI*LYPLQF Trigger: GAACTGGAGCGGATACAGGCAGATGAAGTGATTGCC...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCCCTTCCAGCATTCATTaGCTTCTGGATCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIRTSFENTSPNILPKGTPSSIH*LLDPAG Trigger: GCCTGCTGGATCCAGAAGCCAATGAATGCTGGAAGG...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGCAGCTTCATAATGTTTaGCTCCAGCATTATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLFSVILGTWQTVSWELLQLHNV*LQHYSF Trigger: AAAGCTATAATGCTGGAGTCAAACATTATGAAGCTG...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAATCTAACGACTCTTAGTATCCTGTTAATTTATACTACGGCTCTGTACCCATTGGCCACACTGTaGAGCTCCCGACACTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNLTTLSILLIYTTALYPLATL*SSRHCS Trigger: AGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGG...GTACAGAGCCGTAGTATAAATTAACAGGATACTAAGAGTCGTTAGATTTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCTCAGCTTCAAGTTTATaGCGTTTGACAAATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIEVQPVRNSSEFIPAGASASSL*RLTNAV Trigger: AACAGCATTTGTCAAACGTCATAAACTTGAAGCTGA...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTCTTCAAACTTCTCATTaGGTGTGTGGGGTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVLNPVVASSSLKDAVLCLQTSH*VCGVTF Trigger: AAACGTCACCCCACACACCCAATGAGAAGTTTGAAG...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGGGTTGAGTTCAGCATaGAATAGGATTCCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLNPVVASSSLKDAVLCGLSSA*NRIPQS Trigger: AGATTGTGGAATCCTATTTCATGCTGAACTCAACCC...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATGGAAAAATACAGGGTTaGGTTCAGCATGAAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLNPVVASSSLKDAVLCDGKIQG*VQHEIG Trigger: TCCTATTTCATGCTGAACTCAACCCTGTATTTTTCC...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGAATGGGGTGACTaGGGTCATTTCTTCGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVHEWGD*GHFFDP Trigger: AGGATCGAAGAAATGACCTCAGTCACCCCATTCATG...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GTAACAAGGATCCCTTTATTAAACACTTCAGACACAGCATGCCTGTGTGAGCTGCATTCGGCCACACTTTaGTTTTATAGAGGCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTRIPLLNTSDTACLCELHSATL*FYRGSH Trigger: GTGACTGCCTCTATAAAACCAAAGTGTGGCCGAATG...CAGCTCACACAGGCATGCTGTGTCTGAAGTGTTTAATAAAGGGATCCTTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CCA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCGTTCTTGATCCAAGATaGCAATCACTTCATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GIRTSFENTSPNILPKGTVLDPR*QSLHLP Trigger: AGGCAGATGAAGTGATTGCCATCTTGGATCAAGAAC...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | GGGGCGCGAGCGGACGGCGCGCCGCGCAGTGGCGGGCGCAGCGCGTaGGGATGTCCCGTAGGCGCCGGTGACTGCTCAGGGCGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GARADGAPRSGGRSA*GCPVGAGDCSGRLP Trigger: TGGAAGCCGCCCTGAGCAGTCACCGGCGCCTACGGGACATCCGCACGCGCTGCGCCCGCCACTGCGCGGCGCGCCGTCCGCTCGCGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | AGTGGCGGGCGCAGCGCGTGCGGATGTCCCGTAGGCGCCGGTGACTaGTCAGGGCGGCTTCCAGGTCCCGCACCGCTCGCTCATAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGRSACGCPVGAGD*SGRLPGPAPLAHSR Trigger: GCGACTATGAGCGAGCGGTGCGGGACCTGGAAGCCGCCCTGAGCAGTCACCGGCGCCTACGGGACATCCGCACGCGCTGCGCCCGCCACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 90 bp | GCACCGCTCGCTCATAGTCGCCGCTGTAGTAGGCAGCCACGCCGCTaGCGTAGAGCAGGTCGAAGGGCTGCAGCGGGCCGCGCTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: APLAHSRRCSRQPRR*RRAGRRAAAGRARA Trigger: AGCCCGAGCGCGGCCCGCTGCAGCCCTTCGACCTGCTCTACGCCAGCGGCGTGGCTGCCTACTACAGCGGCGACTATGAGCGAGCGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 90 bp | GCAAGGGAAGAAAGTTCTCGATTGGTGAGAGGCGGCCTGGGCGGGTaGCGAGTTCCCTCACACATTCATGCTGACAGACCAGAACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AREESSRLVRGGLGG*RVPSHIHADRPEPA Trigger: TGCAGGTTCTGGTCTGTCAGCATGAATGTGTGAGGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTCCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | GTGTGTGGGGTGACGTTTTCCCTCGGTATCCATCACCAACCAGCATaGTTCCATTGGCCACACTGTGCAGCTCCCGACACTGCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VCGVTFSLGIHHQPA*FHWPHCAAPDTALA Trigger: CGCAAGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGGAATCATGCTGGTTGGTGATGGATACCGAGGGAAAACGTCACCCCACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTAACATTCTACCCAAGGGGACCCCGTGCCATAGTCCTTAATCCAGTGGTGGTAGGGAACTCTGCGTaGGAAGTCGCTGCGCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLTFYPRGPRAIVLNPVVVGNSA*EVAAHV Trigger: GACGTGCGCAGCGACTTCCAACGCAGAGTTCCCTAC...CACCACTGGATTAAGGACTATGGCACGGGGTCCCCTTGGGTAGAATGTTAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | AAACTGGAGGTAGTCGTAATGCAAGGGAAGAAAGTTCTCGATTGGTaGGAGGCGGCCTGGGCGGGTGGCGAGTTCCCTCACACATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KLEVVVMQGKKVLDW*EAAWAGGEFPHTFM Trigger: CATGAATGTGTGAGGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTCCCTTGCATTACGACTACCTCCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | GAACCCGTTGAGTCCCGTTCAGCTGCTCAGAGTTGTAGACGAAGGTaGTGTTCTCGTAGAGCAGAGGGCCACCTTCTCTTAGGTCTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPVESRSAAQSCRRR*CSRRAEGHLLLGLD Trigger: GTCGAGACCTAAGAGAAGGTGGCCCTCTGCTCTACGAGAACATCACCTTCGTCTACAACTCTGAGCAGCTGAACGGGACTCAACGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | CCTCGGTATCCATCACCAACCAGCATGATTCCATTGGCCACACTGTaGAGCTCCCGACACTGCTCTTGCGACAGGACATTATCGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRYPSPTSMIPLATL*SSRHCSCDRTLSRR Trigger: TCTTCTCGATAATGTCCTGTCGCAAGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGGAATCATGCTGGTTGGTGATGGATACCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | CTCCTTCCAGCATTCATTGGCTTCTGGATCCAGCAGGCAGTTGTCTaGATGAATGGGGTGACTGAGGTCATTTCTTCGATCCTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPAFIGFWIQQAVV*MNGVTEVISSILLP Trigger: GGGCAGCAGGATCGAAGAAATGACCTCAGTCACCCCATTCATGCAGACAACTGCCTGCTGGATCCAGAAGCCAATGAATGCTGGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | AACCTACACTGCTGGAACCCCTGTTTAGGTGTCCCCTCTTACAGAGCACTGTGGTCCTTCCAGCATTCATaGGCTTCTGGATCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLHCWNPCLGVPSYRALWSFQHS*ASGSSR Trigger: CCTGCTGGATCCAGAAGCCAATGAATGCTGGAAGGA...CCACAGTGCTCTGTAAGAGGGGACACCTAAACAGGGGTTCCAGCAGTGTAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | TCACTCCTGAAGGGACTCGGTTCTCATCCTGCCGTCCTCCATAGCTaGTCCAGTAATTCGGTTCAGCATATGAAAATCCCAGGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLKGLGSHPAVLHS*SSNSVQHMKIPGPL Trigger: CAGAGGGCCTGGGATTTTCATATGCTGAACCGAATTACTGGATCAGCTATGGAGGACGGCAGGATGAGAACCGAGTCCCTTCAGGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 90 bp | TCTCGTAGAGCAGAGGGCCACCTTCTCTTAGGTCTCGACCTATCTTaGGCGGTGACTTCTTTCCCATTGACAATCCATGAACTTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRAEGHLLLGLDLS*AVTSFPLTIHELLP Trigger: GGGCAGAAGTTCATGGATTGTCAATGGGAAAGAAGTCACCGCCCAAGATAGGTCGAGACCTAAGAGAAGGTGGCCCTCTGCTCTACGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGCCTTCAAACTTCTCATaGGGTGTGTGGGGTGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLFSVILGTWQTVSWELLPSNFS*GVWGDV Trigger: AACGTCACCCCACACACCCAATGAGAAGTTTGAAGG...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGCCCTCTGCAGCTAACTaGATCAGTTCAGCTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLFSVILGTWQTVSWELLPSAAN*ISSASS Trigger: ACTTGAAGCTGAACTGATCAAGTTAGCTGCAGAGGG...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATACCAGCATGATTCCATaGGCCACACTGTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLNPVVASSSLKDAVLCDTSMIP*ATLCSS Trigger: GGAGCTGCACAGTGTGGCCAATGGAATCATGCTGGT...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | GCCATTGAGGTGCAGCCTGTGAGAAACAGCTCTGAATTTATACCAGCAGGAGCCTGTCATAGAACAGTCTaGCACTCTTCAGTGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AIEVQPVRNSSEFIPAGACHRTV*HSSVAP Trigger: GGGTGCCACTGAAGAGTGCAAGACTGTTCTATGACA...GGCTCCTGCTGGTATAAATTCAGAGCTGTTTCTCACAGGCTGCACCTCAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | TCTCGACCTATCTTGGGCGGTGACTTCTTTCCCATTGACAATCCATaGACTTCTGCCCCATCCATATTCACTCCTGAAGGGACTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPILGGDFFPIDNP*TSAPSIFTPEGTRF Trigger: GAACCGAGTCCCTTCAGGAGTGAATATGGATGGGGCAGAAGTTCATGGATTGTCAATGGGAAAGAAGTCACCGCCCAAGATAGGTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | ATGCTTCCCGCGCTGTTCTTGATCCAAGATGGCAATCACTTCATCTaGCTGTATCCGCTCCAGTTCTCGGTAAAGAGGGTCCAGTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLPALFLIQDGNHFI*LYPLQFSVKRVQCK Trigger: TTTACACTGGACCCTCTTTACCGAGAACTGGAGCGGATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | CAAATGCTGTTAAATCCTCCCGGGCCTCAATGGATGCTGGATCAGTaGTGTCATCCAGCAGACTCTCATAGAAGTCTACATTGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QMLLNPPGPQWMLDQ*CHPADSHRSLHCPG Trigger: TCCTGGACAATGTAGACTTCTATGAGAGTCTGCTGGATGACAGCACTGATCCAGCATCCATTGAGGCCCGGGAGGATTTAACAGCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 90 bp | TTCCACAATCTTCCGAGCCTTCTCGCTGATGTCATAGAACAGTCTTaGACTCTTCAGTGGCACCCGGCCTTCATAACCAAATTTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHNLPSLLADVIEQS*TLQWHPAFITKFEC Trigger: GCACTCAAATTTGGTTATGAAGGCCGGGTGCCACTGAAGAGTGCAAGACTGTTCTATGACATCAGCGAGAAGGCTCGGAAGATTGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 90 bp | TGTCCAGGACATCCTCATTGTCTGGATGGAACATCAGGTAGGCTTTaGCGCACTCCAAGGCTTTCACATATTCACCAACTCTGTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPGHPHCLDGTSGRL*RTPRLSHIHQLCSR Trigger: CCTACTACAGAGTTGGTGAATATGTGAAAGCCTTGGAGTGCGCCAAAGCCTACCTGATGTTCCATCCAGACAATGAGGATGTCCTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 90 bp | CAGACTCTCATAGAAGTCTACATTGTCCAGGACATCCTCATTGTCTaGATGGAACATCAGGTAGGCTTTGGCGCACTCCAAGGCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QTLIEVYIVQDILIV*MEHQVGFGALQGFH Trigger: GTGAAAGCCTTGGAGTGCGCCAAAGCCTACCTGATGTTCCATCCAGACAATGAGGATGTCCTGGACAATGTAGACTTCTATGAGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAGAAAGTTCTCGATaGGTGAGAGGCGGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVEESSR*VRGGLG Trigger: GCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTC...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTGATTCCAGGACATCCTCATaGTCTGGATGGAACATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLNPVVASSSLKDAVLCDSRTSS*SGWNIR Trigger: CCTGATGTTCCATCCAGACAATGAGGATGTCCTGGA...ATCACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTCTCTGTGATTCTTGGGACTTGGCAGACTGTGTCCTGGGAGCTCCTGGTGACTTCTTTCCCATaGACAATCCATGAACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLFSVILGTWQTVSWELLVTSFP*TIHELL Trigger: CAGAAGTTCATGGATTGTCAATGGGAAAGAAGTCAC...CAGGAGCTCCCAGGACACAGTCTGCCAAGTCCCAAGAATCACAGAGAACAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCTTAATCCAGTGGTGGCTTCCTCAAGCCTGAAAGATGCTGTTCTCTGTCTTCCCGCGCTGTTCTaGATCCAAGATGGCAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVLNPVVASSSLKDAVLCLPALF*IQDGNH Trigger: GTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAG...ACAGAGAACAGCATCTTTCAGGCTTGAGGAAGCCACCACTGGATTAAGGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | TCATCTTTGGGGTTAATATTCAGTCCATGCTTCCCGCGCTGTTCTTaGTCCAAGATGGCAATCACTTCATCTGCCTGTATCCGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGLIFSPCFPRCS*SKMAITSSACIRSS Trigger: ACTGGAGCGGATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCATGGACTGAATATTAACCCCAAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAATATGCTGCAAAGTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCGAGAAGAACCCGTaGAGTCCCGTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNMLQSNCVCVCVCVCVIEKNP*SPVQLL Trigger: GAGCAGCTGAACGGGACTCAACGGGTTCTTCTCGAT...CACACACACACACACACACACACACACACAGTTACTTTGCAGCATATTCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 90 bp | CAGGGCTGTTCTGCAGACCATGTGTGTATAGGAAAAATACAGGGTTaGGTTCAGCATGAAATAGGATTCCACAATCTTCCGAGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGCSADHVCIGKIQG*VQHEIGFHNLPSLL Trigger: GAGAAGGCTCGGAAGATTGTGGAATCCTATTTCATGCTGAACTCAACCCTGTATTTTTCCTATACACACATGGTCTGCAGAACAGCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS-3UTR CAA 90 bp | GGAATCAGAACTTCATTTGAAAACACCAGTCCTAACATTCTACCCAAGGGGACCGTGCTTTTAAAACAGTaGCTCCTTCAAACTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GIRTSFENTSPNILPKGTVLLKQ*LLQTSH Trigger: ATGAGAAGTTTGAAGGAGCAACTGTTTTAAAAGCAC...GGTCCCCTTGGGTAGAATGTTAGGACTGGTGTTTTCAAATGAAGTTCTGATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | CGGGCGCAGCGCGTGCGGATGTCCCGTAGGCGCCGGTaGCTGCTCAGGGCGGCTTCCAGGTCCCGCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAQRVRMSRRRR*LLRAASRSRTA Trigger: AGCGGTGCGGGACCTGGAAGCCGCCCTGAGCAGTCACCGGCGCCTACGGGACATCCGCACGCGCTGCGCCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | CGCAGCGCGTGCGGATGTCCCGTAGGCGCCGGTGACTaGTCAGGGCGGCTTCCAGGTCCCGCACCGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSACGCPVGAGD*SGRLPGPAPLA Trigger: AGCGAGCGGTGCGGGACCTGGAAGCCGCCCTGAGCAGTCACCGGCGCCTACGGGACATCCGCACGCGCTGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | ACCGGCGACCGTCCTGGGGGCCGCCCCGCTGCGGTGTaGGCAGCAGTAGCAGCAACAGCAGCGACACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: TGDRPGGRPAAV*AAVAATAATPT Trigger: CGTGGGTGTCGCTGCTGTTGCTGCTACTGCTGCCCACACCGCAGCGGGGCGGCCCCCAGGACGGTCGCCGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | GCTCATAGTCGCCGCTGTAGTAGGCAGCCACGCCGCTaGCGTAGAGCAGGTCGAAGGGCTGCAGCGGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AHSRRCSRQPRR*RRAGRRAAAGR Trigger: GCGGCCCGCTGCAGCCCTTCGACCTGCTCTACGCCAGCGGCGTGGCTGCCTACTACAGCGGCGACTATGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 72 bp | GGAGGTAGTCGTAATGCAAGGGAAGAAAGTTCTCGATaGGTGAGAGGCGGCCTGGGCGGGTGGCGAGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGSRNAREESSR*VRGGLGGWRVP Trigger: GGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTCCCTTGCATTACGACTACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | GTAGTCGTAATGCAAGGGAAGAAAGTTCTCGATTGGTaGGAGGCGGCCTGGGCGGGTGGCGAGTTCCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VVVMQGKKVLDW*EAAWAGGEFPH Trigger: GTGAGGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTCCCTTGCATTACGACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | GAAAGTTCTCGATTGGTGAGAGGCGGCCTGGGCGGGTaGCGAGTTCCCTCACACATTCATGCTGACAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: ESSRLVRGGLGG*RVPSHIHADRP Trigger: TGGTCTGTCAGCATGAATGTGTGAGGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | AGGCAAACTGGAGGTAGTCGTAATGCAAGGGAAGAAAGTTCTCGATaGGTGAGAGGCGGCCTGGGCGGGTGGCGAGTTCCCTCACACATT | + |
|
Preference number: 6 (lower is better) Translates to: RQTGGSRNAREESSR*VRGGLGGWRVPSHI Trigger: AATGTGTGAGGGAACTCGCCACCCGCCCAGGCCGCCTCTCACCAATCGAGAACTTTCTTCCCTTGCATTACGACTACCTCCAGTTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | GGTGACGTTTTCCCTCGGTATCCATCACCAACCAGCATGATTCCATaGGCCACACTGTGCAGCTCCCGACACTGCTCTTGCGACAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GDVFPRYPSPTSMIP*ATLCSSRHCSCDRT Trigger: TGTCCTGTCGCAAGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGGAATCATGCTGGTTGGTGATGGATACCGAGGGAAAACGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | GTAAGCGGGAGGCTCCTTCCAGCATTCATTGGCTTCTaGATCCAGCAGGCAGTTGTCTGCATGAATGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSGRLLPAFIGF*IQQAVVCMNGV Trigger: CACCCCATTCATGCAGACAACTGCCTGCTGGATCCAGAAGCCAATGAATGCTGGAAGGAGCCTCCCGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | CAGCATGATTCCATTGGCCACACTGTGCAGCTCCCGACACTGCTCTaGCGACAGGACATTATCGAGAAGAACCCGTTGAGTCCCGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHDSIGHTVQLPTLL*RQDIIEKNPLSPVQ Trigger: CTGAACGGGACTCAACGGGTTCTTCTCGATAATGTCCTGTCGCAAGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGGAATCATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | CCATCACCAACCAGCATGATTCCATTGGCCACACTGTaGAGCTCCCGACACTGCTCTTGCGACAGGACATTA | + |
|
Preference number: 6 (lower is better) Translates to: PSPTSMIPLATL*SSRHCSCDRTL Trigger: TAATGTCCTGTCGCAAGAGCAGTGTCGGGAGCTGCACAGTGTGGCCAATGGAATCATGCTGGTTGGTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | GAGTCCCGTTCAGCTGCTCAGAGTTGTAGACGAAGGTaGTGTTCTCGTAGAGCAGAGGGCCACCTTCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ESRSAAQSCRRR*CSRRAEGHLLL Trigger: TAAGAGAAGGTGGCCCTCTGCTCTACGAGAACATCACCTTCGTCTACAACTCTGAGCAGCTGAACGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | CTCCCGACACTGCTCTTGCGACAGGACATTATCGAGAAGAACCCGTaGAGTCCCGTTCAGCTGCTCAGAGTTGTAGACGAAGGTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPTLLLRQDIIEKNP*SPVQLLRVVDEGDV Trigger: AACATCACCTTCGTCTACAACTCTGAGCAGCTGAACGGGACTCAACGGGTTCTTCTCGATAATGTCCTGTCGCAAGAGCAGTGTCGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | CAATCCATGAACTTCTGCCCCATCCATATTCACTCCTaGAGGGACTCGGTTCTCATCCTGCCGTCCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: QSMNFCPIHIHS*RDSVLILPSSI Trigger: TATGGAGGACGGCAGGATGAGAACCGAGTCCCTTCAGGAGTGAATATGGATGGGGCAGAAGTTCATGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | CTTCCGAGCCTTCTCGCTGATGTCATAGAACAGTCTTaGACTCTTCAGTGGCACCCGGCCTTCATAACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPSLLADVIEQS*TLQWHPAFITK Trigger: TTTGGTTATGAAGGCCGGGTGCCACTGAAGAGTGCAAGACTGTTCTATGACATCAGCGAGAAGGCTCGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | GCGCTGTTCTTGATCCAAGATGGCAATCACTTCATCTaGCTGTATCCGCTCCAGTTCTCGGTAAAGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALFLIQDGNHFI*LYPLQFSVKRV Trigger: GACCCTCTTTACCGAGAACTGGAGCGGATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | GCAGAGGGCCACCTTCTCTTAGGTCTCGACCTATCTTaGGCGGTGACTTCTTTCCCATTGACAATCCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: AEGHLLLGLDLS*AVTSFPLTIHE Trigger: TTCATGGATTGTCAATGGGAAAGAAGTCACCGCCCAAGATAGGTCGAGACCTAAGAGAAGGTGGCCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | TCAGTCCATGCTTCCCGCGCTGTTCTTGATCCAAGATaGCAATCACTTCATCTGCCTGTATCCGCTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVHASRAVLDPR*QSLHLPVSAPV Trigger: AACTGGAGCGGATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCATGGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 72 bp | CTGCTCTTGCGACAGGACATTATCGAGAAGAACCCGTaGAGTCCCGTTCAGCTGCTCAGAGTTGTAGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLRQDIIEKNP*SPVQLLRVVDE Trigger: TTCGTCTACAACTCTGAGCAGCTGAACGGGACTCAACGGGTTCTTCTCGATAATGTCCTGTCGCAAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | AGTTGCTCCTTCAAACTTCTCATTGGGTGTGTGGGGTaGCGTTTTCCCTCGGTATCCATCACCAACCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SCSFKLLIGCVG*RFPSVSITNQH Trigger: ATGCTGGTTGGTGATGGATACCGAGGGAAAACGTCACCCCACACACCCAATGAGAAGTTTGAAGGAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | CTCATCTTTGGGGTTAATATTCAGTCCATGCTTCCCGCGCTGTTCTaGATCCAAGATGGCAATCACTTCATCTGCCTGTATCCGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LIFGVNIQSMLPALF*IQDGNHFICLYPLQ Trigger: CTGGAGCGGATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCATGGACTGAATATTAACCCCAAAGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | AAGGGACTCGGTTCTCATCCTGCCGTCCTCCATAGCTaGTCCAGTAATTCGGTTCAGCATATGAAAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KGLGSHPAVLHS*SSNSVQHMKIP Trigger: TGGGATTTTCATATGCTGAACCGAATTACTGGATCAGCTATGGAGGACGGCAGGATGAGAACCGAGTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | TTAAATCCTCCCGGGCCTCAATGGATGCTGGATCAGTaGTGTCATCCAGCAGACTCTCATAGAAGTCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: LNPPGPQWMLDQ*CHPADSHRSLH Trigger: ATGTAGACTTCTATGAGAGTCTGCTGGATGACAGCACTGATCCAGCATCCATTGAGGCCCGGGAGGATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS GCA 72 bp | CATTTCTTCGATCCTGCTGCCCAGACAGGGCTGTTCTaGAGACCATGTGTGTATAGGAAAAATACAGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HFFDPAAQTGLF*RPCVYRKNTGL Trigger: CAACCCTGTATTTTTCCTATACACACATGGTCTGCAGAACAGCCCTGTCTGGGCAGCAGGATCGAAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | CATCCTCATTGTCTGGATGGAACATCAGGTAGGCTTTaGCGCACTCCAAGGCTTTCACATATTCACCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: HPHCLDGTSGRL*RTPRLSHIHQL Trigger: GAGTTGGTGAATATGTGAAAGCCTTGGAGTGCGCCAAAGCCTACCTGATGTTCCATCCAGACAATGAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | AAAACAGTTGCTCCTTCAAACTTCTCATTGGGTGTGTaGGGTGACGTTTTCCCTCGGTATCCATCACCAACC | + |
|
Preference number: 6 (lower is better) Translates to: KTVAPSNFSLGV*GDVFPRYPSPT Trigger: GGTTGGTGATGGATACCGAGGGAAAACGTCACCCCACACACCCAATGAGAAGTTTGAAGGAGCAACTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 72 bp | GGTCTCGACCTATCTTGGGCGGTGACTTCTTTCCCATaGACAATCCATGAACTTCTGCCCCATCCATATTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLDLSWAVTSFP*TIHELLPHPYS Trigger: TGAATATGGATGGGGCAGAAGTTCATGGATTGTCAATGGGAAAGAAGTCACCGCCCAAGATAGGTCGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 90 bp | CTTCTCTTAGGTCTCGACCTATCTTGGGCGGTGACTTCTTTCCCATaGACAATCCATGAACTTCTGCCCCATCCATATTCACTCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLGLDLSWAVTSFP*TIHELLPHPYSLLK Trigger: CTTCAGGAGTGAATATGGATGGGGCAGAAGTTCATGGATTGTCAATGGGAAAGAAGTCACCGCCCAAGATAGGTCGAGACCTAAGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | GGGTTAATATTCAGTCCATGCTTCCCGCGCTGTTCTTaGTCCAAGATGGCAATCACTTCATCTGCCTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: GLIFSPCFPRCS*SKMAITSSACI Trigger: GATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCATGGACTGAATATTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | ATAGAAGTCTACATTGTCCAGGACATCCTCATTGTCTaGATGGAACATCAGGTAGGCTTTGGCGCACTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IEVYIVQDILIV*MEHQVGFGALQ Trigger: TTGGAGTGCGCCAAAGCCTACCTGATGTTCCATCCAGACAATGAGGATGTCCTGGACAATGTAGACTTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CCA 72 bp | CTCGCTGATGTCATAGAACAGTCTTGCACTCTTCAGTaGCACCCGGCCTTCATAACCAAATTTGAGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LADVIEQSCTLQ*HPAFITKFECF Trigger: AAAGCACTCAAATTTGGTTATGAAGGCCGGGTGCCACTGAAGAGTGCAAGACTGTTCTATGACATCAGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS CAA 72 bp | GGGGTTAATATTCAGTCCATGCTTCCCGCGCTGTTCTaGATCCAAGATGGCAATCACTTCATCTGCCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GVNIQSMLPALF*IQDGNHFICLY Trigger: ATACAGGCAGATGAAGTGATTGCCATCTTGGATCAAGAACAGCGCGGGAAGCATGGACTGAATATTAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||
| CDS TCA 72 bp | TCTGCAGACCATGTGTGTATAGGAAAAATACAGGGTTaGGTTCAGCATGAAATAGGATTCCACAATCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SADHVCIGKIQG*VQHEIGFHNLP Trigger: CGGAAGATTGTGGAATCCTATTTCATGCTGAACTCAACCCTGTATTTTTCCTATACACACATGGTCTGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039990.6 |
||