Pregenerated sensors for P2RY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032860Ensembl transcript IDs: ENSMUST00000037540.5, ENSMUST00000178340.3, ENSMUST00000207916.2, ENSMUST00000208340.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGGCTCTGCTGTGTCCTCTCTGAGCCTGCTTCCCCCTTGGATCTaGGAGGCTGAACCTCAGCCTAGGTACCTTGGCAGGAATGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LGSAVSSLSLLPPWI*EAEPQPRYLGRNGS Trigger: GCTGCCATTCCTGCCAAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAGAGAGGACACAGCAGAGCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR CCA 90 bp | GGTAGCCTGGGCTCTGCTGTGTCCTCTCTGAGCCTGCTTCCCCCTTaGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTGGCAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: GSLGSAVSSLSLLPP*IWEAEPQPRYLGRN Trigger: ATTCCTGCCAAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAGAGAGGACACAGCAGAGCCCAGGCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR CCA 90 bp | CCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATATAAGTTATaGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: PRAQPNGWHSLSYKL*FPPAASQGSLQGPD Trigger: GTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | GGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGCTGTTaGTCCGCATCAGAGGATATCAGCCCCTTTAACAAGCCTTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GPQDEYPEPLPSESC*SASEDISPFNKPWS Trigger: GGACCAAGGCTTGTTAAAGGGGCTGATATCCTCTGATGCGGATCAACAGCTCTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | ACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCCTCCTCTaGGCTAAGTCCATCGTGCCCAGGTCCATCCTACATCACCATGGG | + |
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Preference number: 1 (lower is better) Translates to: TLALRGLSLGLRVLL*AKSIVPRSILHHHG Trigger: CCCATGGTGATGTAGGATGGACCTGGGCACGATGGACTTAGCTCAGAGGAGGACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | CCCACCACACACACACACACACACCCATCCAAGACTTCCTACTACTaGAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PTTHTHTHPSKTSYY*RKAGGRDNRPLCGW Trigger: CCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGGAAGTCTTGGATGGGTGTGTGTGTGTGTGTGTGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | CTTGGCACAGTACAATACAGAAGACAAGTGGCTGAAAGGCAGGGTTaGCCTGGGGGACTGAGAAGGGATCACCCCCACCACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: LGTVQYRRQVAERQG*PGGLRRDHPHHTHT Trigger: TGTGTGTGTGTGGTGGGGGTGATCCCTTCTCAGTCCCCCAGGTCAACCCTGCCTTTCAGCCACTTGTCTTCTGTATTGTACTGTGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | ACTCCTCTCCATGCTTGGCACAGTACAATACAGAAGACAAGTGGCTaGAAGGCAGGGTTGACCTGGGGGACTGAGAAGGGATCACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TPLHAWHSTIQKTSG*KAGLTWGTEKGSPP Trigger: TGGGGGTGATCCCTTCTCAGTCCCCCAGGTCAACCCTGCCTTTCAGCCACTTGTCTTCTGTATTGTACTGTGCCAAGCATGGAGAGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR CCA 90 bp | GATGGAGGCAAGAGGGTAAGAGGTTCAAGGCCAGTTTCAGCTACATaGCTAATTCAAAGTCCGCCTTTGGTTCTCCGAGATGAGCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: DGGKRVRGSRPVSAT*LIQSPPLVLRDEPH Trigger: ATGAGGCTCATCTCGGAGAACCAAAGGCGGACTTTGAATTAGCCATGTAGCTGAAACTGGCCTTGAACCTCTTACCCTCTTGCCTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037540.5 ENSMUST00000208340.2 |
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| 3UTR TCA 90 bp | CAGGAATTTTGCAATGGGTTCGCCTTTGTATTGGTAATTTTAAATTaGAATAGGATTGGCCACAGTGGAATTGCTTGCACCACAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: QEFCNGFAFVLVILN*NRIGHSGIACTTGI Trigger: AATCCCTGTGGTGCAAGCAATTCCACTGTGGCCAATCCTATTTCAATTTAAAATTACCAATACAAAGGCGAACCCATTGCAAAATTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037540.5 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCATGGTTCCCACCTGCTaGCAGCCAGGGGAGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGMVPTC*QPGESP Trigger: TGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCAT...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCGTTATGGTTCCCACCTaGTGCCAGCCAGGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGVMVPT*CQPGES Trigger: AGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAAC...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCGTTTGTCTCTTGGCCTaGGGGTCCTCCTCTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGVCLLA*GSSSEL Trigger: TAGCTCAGAGGAGGACCCTCAGGCCAAGAGACAAAC...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATGCATTCCAGGGACCCCTCCCTGACTGGGGCTCACACGGTCCCAGCTAGTCTTCCCCCTTGGATCTaGGAGGCTGAACCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VMHSRDPSLTGAHTVPASLPPWI*EAEPQP Trigger: AGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAG...ACTAGCTGGGACCGTGTGAGCCCCAGTCAGGGAGGGGTCCCTGGAATGCATGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037540.5 ENSMUST00000208340.2 |
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| 3UTR CAA 90 bp | TGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTaGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: CFPLGSGRLNLSLGT*AGMAAVCIGVGWHC Trigger: GCAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATCTGCTGTGTCCTCTCTaGGCCTGCTTCCCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHLLCPL*ACFPLG Trigger: TCCAAGGGGGAAGCAGGCTCAGAGAGGACACAGCAG...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCAGCCTGCTTCCCCCTTaGATCTGGGAGGCTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: TASQVMPQSTAQWVAQPFSLLPP*IWEAEP Trigger: AGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCT...GAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACACTGCTGTGTCCTCTCTaGGCCTGCTTCCCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: ISYGSHLLPARGVSRDLTLLCPL*ACFPLG Trigger: TCCAAGGGGGAAGCAGGCTCAGAGAGGACACAGCAG...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR TCA 90 bp | TATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACCTGCTGTGTCCTCTCTaGGCCTGCTTCCCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: YKLWFPPAASQGSLQGPDLLCPL*ACFPLG Trigger: TCCAAGGGGGAAGCAGGCTCAGAGAGGACACAGCAG...GTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCGTTTGTCTCTTGGCCTaGGGGTCCTCCTCTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TASQVMPQSTAQWVAQPFVCLLA*GSSSEL Trigger: TAGCTCAGAGGAGGACCCTCAGGCCAAGAGACAAAC...GAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACCTTCCCCCTTGGATCTaGGAGGCTGAACCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: YKLWFPPAASQGSLQGPDLPPWI*EAEPQP Trigger: AGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAG...GTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGAGTATCCTGAGCCCCTaGCAAGTGAGAGCTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PRYLGRNGSCLHRSRVALSILSP*QVRAVD Trigger: ATCAACAGCTCTCACTTGGCAGGGGCTCAGGATACT...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGACAGCCTGCTTCCCCCTTaGATCTGGGAGGCTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: TTEGRQEAEITGLCVGGDSLLPP*IWEAEP Trigger: AGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCT...GTCACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCCTAATCCAGGTAGCCTaGGCTCTGCTGTGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VSRDLTLALRGLSLGLRVLIQVA*ALLCPL Trigger: GAGAGGACACAGCAGAGCCCAGGCTACCTGGATTAG...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGAATGATTGGGGACTTTaGAGTCCTGCTACTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PRYLGRNGSCLHRSRVALNDWGL*SPATLG Trigger: CCCAAGAGTAGCAGGACTCCAAAGTCCCCAATCATT...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATAATGATTGGGGACTTTaGAGTCCTGCTACTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHNDWGL*SPATLG Trigger: CCCAAGAGTAGCAGGACTCCAAAGTCCCCAATCATT...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGCTTCCCCCTTGGATCTaGGAGGCTGAACCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: NGWHSLSYKLWFPPAASQLPPWI*EAEPQP Trigger: AGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAG...CTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGCTAATCCAGGTAGCCTaGGCTCTGCTGTGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: MGGTAFHISYGSHLLPARLIQVA*ALLCPL Trigger: GAGAGGACACAGCAGAGCCCAGGCTACCTGGATTAG...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR GCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTAGTATCCTGAGCCCCTaGCAAGTGAGAGCTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SYKLWFPPAASQGSLQGPSILSP*QVRAVD Trigger: ATCAACAGCTCTCACTTGGCAGGGGCTCAGGATACT...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCTCCAGTCACCTTGGGATTCTACTCCTAATCCAGGTAGCCTGGGCTCTGAATGATTGGGGACTTTaGAGTCCTGCTACTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: EPSSHLGILLLIQVAWALNDWGL*SPATLG Trigger: CCCAAGAGTAGCAGGACTCCAAAGTCCCCAATCATT...CAGAGCCCAGGCTACCTGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATACACGTACAAATGATTaGGGACTTTGGAGTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHTRTND*GLWSPA Trigger: AGCAGGACTCCAAAGTCCCCAATCATTTGTACGTGT...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGCTAATCCAGGTAGCCTaGGCTCTGCTGTGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NGWHSLSYKLWFPPAASQLIQVA*ALLCPL Trigger: GAGAGGACACAGCAGAGCCCAGGCTACCTGGATTAG...CTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGCCCTCCAGTCACCTTaGGATTCTACTCCTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: SYKLWFPPAASQGSLQGPALQSP*DSTPNP Trigger: TGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGC...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR CAA 90 bp | AACTCACACGTACAAATGATTGGGGACTTTGGAGTCCTGCTACTCTaGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NSHVQMIGDFGVLLL*GPQDEYPEPLPSES Trigger: GCTCTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCAGGACTCCAAAGTCCCCAATCATTTGTACGTGTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR GCA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTAGTATCCTGAGCCCCTaGCAAGTGAGAGCTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PTTEGRQEAEITGLCVGGSILSP*QVRAVD Trigger: ATCAACAGCTCTCACTTGGCAGGGGCTCAGGATACT...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGCCCTCCAGTCACCTTaGGATTCTACTCCTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: PTTEGRQEAEITGLCVGGALQSP*DSTPNP Trigger: TGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGC...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGCCCTCCAGTCACCTTaGGATTCTACTCCTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: LSYKLWFPPAASQGSLQGALQSP*DSTPNP Trigger: TGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGACACGTACAAATGATTaGGGACTTTGGAGTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: MGGTAFHISYGSHLLPARTRTND*GLWSPA Trigger: AGCAGGACTCCAAAGTCCCCAATCATTTGTACGTGT...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACAGCCTTTCTTAAGATATaGTTTCCCAACTCACACGTA | + |
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Preference number: 2 (lower is better) Translates to: ISYGSHLLPARGVSRDLTAFLKI*FPNSHV Trigger: TACGTGTGAGTTGGGAAACCATATCTTAAGAAAGGC...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCGCCTTTCTTAAGATATaGTTTCCCAACTCACACGTA | + |
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Preference number: 2 (lower is better) Translates to: VSRDLTLALRGLSLGLRVAFLKI*FPNSHV Trigger: TACGTGTGAGTTGGGAAACCATATCTTAAGAAAGGC...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGCCTTTCTTAAGATATaGTTTCCCAACTCACACGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSYKLWFPPAASQGSLQGAFLKI*FPNSHV Trigger: TACGTGTGAGTTGGGAAACCATATCTTAAGAAAGGC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGCCTTTCTTAAGATATaGTTTCCCAACTCACACGTA | + |
|
Preference number: 2 (lower is better) Translates to: NGWHSLSYKLWFPPAASQAFLKI*FPNSHV Trigger: TACGTGTGAGTTGGGAAACCATATCTTAAGAAAGGC...CTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCCTCAGCCTAGGTACCTaGGCAGGAATGGCAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSRDLTLALRGLSLGLRVLSLGT*AGMAAV Trigger: GACAGCTGCCATTCCTGCCAAGGTACCTAGGCTGAG...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTCTCAGCCTAGGTACCTaGGCAGGAATGGCAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SYKLWFPPAASQGSLQGPLSLGT*AGMAAV Trigger: GACAGCTGCCATTCCTGCCAAGGTACCTAGGCTGAG...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCCTCAGCCTAGGTACCTaGGCAGGAATGGCAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RSILHHHGNKSPPVTLGFLSLGT*AGMAAV Trigger: GACAGCTGCCATTCCTGCCAAGGTACCTAGGCTGAG...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR TCA 72 bp | CATGCTTGGCACAGTACAATACAGAAGACAAGTGGCTaGAAGGCAGGGTTGACCTGGGGGACTGAGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HAWHSTIQKTSG*KAGLTWGTEKG Trigger: TCCCTTCTCAGTCCCCCAGGTCAACCCTGCCTTTCAGCCACTTGTCTTCTGTATTGTACTGTGCCAAGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR CCA 72 bp | TACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTaGGATTCTACTCCTAATCCAGGTAGCCTGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YITMGTRALQSP*DSTPNPGSLGS Trigger: AGAGCCCAGGCTACCTGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR CCA 72 bp | AAGAGGGTAAGAGGTTCAAGGCCAGTTTCAGCTACATaGCTAATTCAAAGTCCGCCTTTGGTTCTCCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KRVRGSRPVSAT*LIQSPPLVLRD Trigger: ATCTCGGAGAACCAAAGGCGGACTTTGAATTAGCCATGTAGCTGAAACTGGCCTTGAACCTCTTACCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037540.5 ENSMUST00000208340.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCCCCGCACGCTGGTGGTaGCGAAGTAGAGCACGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGPARWW*RSRARV Trigger: CACCCGTGCTCTACTTCGTCACCACCAGCGTGCGGG...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCCAGCGGCAGGGACGCTaGGTAGAGAGAGTCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGQRQGR*VERVRN Trigger: GTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTG...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCCAGCGGCAGGGACGCTaGGTAGAGAGAGTCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TASQVMPQSTAQWVAQPFQRQGR*VERVRN Trigger: GTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTG...GAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATCCCCAACGCAGGGAGTaGAGAGGGCGCAGGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDPQRRE*RGRRTP Trigger: GGGAGTCCTGCGCCCTCTGCACTCCCTGCGTTGGGG...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGGAGCACCGTGCTAAATaGCCAGTGGTCACCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRYLGRNGSCLHRSRVALEHRAK*PVVTPG Trigger: GCCCGGGGTGACCACTGGCCATTTAGCACGGTGCTC...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATGCACAGACTTGCGCTTaGCCCGAGGCAGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHAQTCA*PEADLL Trigger: CAGGAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGC...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCTCCAGTCACCTTGGGATTCTACTCCTAATCCAGGTAGCCTGGGCTCTGGAAGTAGAGCACGGGTaGCTGGCAGGCCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSSHLGILLLIQVAWALEVEHG*LAGQHQ Trigger: CTGGTGCTGGCCTGCCAGGCACCCGTGCTCTACTTC...CAGAGCCCAGGCTACCTGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTTGTGCAGGCCCAGCTTaGGACGAGCCTGTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYKLWFPPAASQGSLQGPCAGPA*DEPVGW Trigger: CCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACA...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACAGAGCACCGTGCTAAATaGCCAGTGGTCACCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISYGSHLLPARGVSRDLTEHRAK*PVVTPG Trigger: GCCCGGGGTGACCACTGGCCATTTAGCACGGTGCTC...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGAGGGTGCGCGTGAGGTaGAAAGGCAGGAAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRYLGRNGSCLHRSRVALRVRVR*KGRKQR Trigger: CCTCTGCTTCCTGCCTTTCCACCTCACGCGCACCCT...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATGGTCAAGACAACTGTTaGCGCTGGCCAGCGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDGQDNC*RWPAAG Trigger: CCCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACC...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGGTCAAGACAACTGTTaGCGCTGGCCAGCGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYKLWFPPAASQGSLQGPGQDNC*RWPAAG Trigger: CCCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACC...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGCTCCGTGGGTGGCTTaGCATCTCGGGCAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPRSILHHHGNKSPPVTLAPWVA*HLGQSG Trigger: TCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGC...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGCAGCGGCAGGGACGCTaGGTAGAGAGAGTCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPRSILHHHGNKSPPVTLQRQGR*VERVRN Trigger: GTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTG...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATGAAGTAGAGCACGGGTaGCTGGCAGGCCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDEVEHG*LAGQHQ Trigger: CTGGTGCTGGCCTGCCAGGCACCCGTGCTCTACTTC...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | ACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGACTGTGCAGGCCCAGCTTaGGACGAGCCTGTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTEGRQEAEITGLCVGGDCAGPA*DEPVGW Trigger: CCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACA...GTCACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGATGTGCAGGCCCAGCTTaGGACGAGCCTGTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYKLWFPPAASQGSLQGCAGPA*DEPVGW Trigger: CCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACA...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCTGTGCAGGCCCAGCTTaGGACGAGCCTGTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAFHISYGSHLLPARGVSCAGPA*DEPVGW Trigger: CCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACA...GGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATGAGCACCGTGCTAAATaGCCAGTGGTCACCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDEHRAK*PVVTPG Trigger: GCCCGGGGTGACCACTGGCCATTTAGCACGGTGCTC...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCTGAGCTAAGTCCATCGTGCCCAGGTCCATCCTACATCACCATGGGAGAGCACCGTGCTAAATaGCCAGTGGTCACCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSELSPSCPGPSYITMGEHRAK*PVVTPG Trigger: GCCCGGGGTGACCACTGGCCATTTAGCACGGTGCTC...TCCCATGGTGATGTAGGATGGACCTGGGCACGATGGACTTAGCTCAGAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACAAGGGTGCGCGTGAGGTaGAAAGGCAGGAAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISYGSHLLPARGVSRDLTRVRVR*KGRKQR Trigger: CCTCTGCTTCCTGCCTTTCCACCTCACGCGCACCCT...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTGCTACTCTTGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGGGTGCGCGTGAGGTaGAAAGGCAGGAAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLLLGPQDEYPEPLPSERVRVR*KGRKQR Trigger: CCTCTGCTTCCTGCCTTTCCACCTCACGCGCACCCT...CTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGGTCAAGACAACTGTTaGCGCTGGCCAGCGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTEGRQEAEITGLCVGGGQDNC*RWPAAG Trigger: CCCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACC...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGGTCAAGACAACTGTTaGCGCTGGCCAGCGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYKLWFPPAASQGSLQGGQDNC*RWPAAG Trigger: CCCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGCCTCCCAGGTGCCATTaGTGGTGCTATTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRYLGRNGSCLHRSRVALPPRCH*WCYSRV Trigger: AACCCTGGAATAGCACCATCAATGGCACCTGGGAGG...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCTGAGCTAAGTCCATCGTGCCCAGGTCCATCCTACATCACCATGGGACAGCGGCAGGGACGCTaGGTAGAGAGAGTCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSELSPSCPGPSYITMGQRQGR*VERVRN Trigger: GTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTG...TCCCATGGTGATGTAGGATGGACCTGGGCACGATGGACTTAGCTCAGAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGAAGTAGAGCACGGGTaGCTGGCAGGCCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTTEGRQEAEITGLCVGGEVEHG*LAGQHQ Trigger: CTGGTGCTGGCCTGCCAGGCACCCGTGCTCTACTTC...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | ACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGACGAAGTAGAGCACGGGTaGCTGGCAGGCCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTEGRQEAEITGLCVGGDEVEHG*LAGQHQ Trigger: CTGGTGCTGGCCTGCCAGGCACCCGTGCTCTACTTC...GTCACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHDKSLP*QEVEYR Trigger: CCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTC...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCTGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLPPWIWEAEPQPRYLDKSLP*QEVEYR Trigger: CCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTC...AAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGCTCCGTGGGTGGCTTaGCATCTCGGGCAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSYKLWFPPAASQGSLQGAPWVA*HLGQSG Trigger: TCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCGCTCCGTGGGTGGCTTaGCATCTCGGGCAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSILHHHGNKSPPVTLGFAPWVA*HLGQSG Trigger: TCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGC...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR CAA 72 bp | CTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTaGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGRLNLSLGT*AGMAAVCIGVG Trigger: CCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | CTGAGCCTGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTGCAGCTGAGGTCAAGTaGTCGGAAGGAGTAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLPPWIWEAEPQPRYLAAEVK*SEGVVE Trigger: CTCTACTACTCCTTCCGATCACTTGACCTCAGCTGC...AAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATGCAGCTGAGGTCAAGTaGTCGGAAGGAGTAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHAAEVK*SEGVVE Trigger: CTCTACTACTCCTTCCGATCACTTGACCTCAGCTGC...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | TCGTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTGTACCAAGGCAATGGTaGGCACAGACTTGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPGPSYITMGTRALQSPVPRQW*AQTCAW Trigger: CCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTAC...AGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGATGGCGTTGAGGGTGTaGCAGCTGAGGTCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRYLGRNGSCLHRSRVALMALRV*QLRSSD Trigger: ATCACTTGACCTCAGCTGCCACACCCTCAACGCCAT...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | CTGAGCCTGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTATGGCGTTGAGGGTGTaGCAGCTGAGGTCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLPPWIWEAEPQPRYLMALRV*QLRSSD Trigger: ATCACTTGACCTCAGCTGCCACACCCTCAACGCCAT...AAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | TCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCTACTCCTGCTCCGTGGGTGGCTTaGCATCTCGGGCAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYITMGTRALQSPWDSTPAPWVA*HLGQSG Trigger: TCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGC...AGGAGTAGAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATCACTTCCAGCTGGTGTaGACTCTGTCCGTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHHFQLV*TLSVLS Trigger: ACTCAAGACGGACAGAGTCCACACCAGCTGGAAGTG...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCTGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTCACTTCCAGCTGGTGTaGACTCTGTCCGTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLPPWIWEAEPQPRYLHFQLV*TLSVLS Trigger: ACTCAAGACGGACAGAGTCCACACCAGCTGGAAGTG...AAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | ACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCGTCGTCACTGCTGACTaGCAAATCTTTCCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TASQVMPQSTAQWVAQPFVVTAD*QIFPHS Trigger: ACTGTGAGGAAAGATTTGTCAGTCAGCAGTGACGAC...GAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDDKSLP*QEVEYR Trigger: CCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTC...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | AATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGAGGGTGCGCGTGAGGTaGAAAGGCAGGAAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGWHSLSYKLWFPPAASQRVRVR*KGRKQR Trigger: CCTCTGCTTCCTGCCTTTCCACCTCACGCGCACCCT...CTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACAATGGCGTTGAGGGTGTaGCAGCTGAGGTCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISYGSHLLPARGVSRDLTMALRV*QLRSSD Trigger: ATCACTTGACCTCAGCTGCCACACCCTCAACGCCAT...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | GTCCTGCTACTCTTGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGCACTTCCAGCTGGTGTaGACTCTGTCCGTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLLLGPQDEYPEPLPSEHFQLV*TLSVLS Trigger: ACTCAAGACGGACAGAGTCCACACCAGCTGGAAGTG...CTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGAGTCTCACTTCCAGCTaGTGTGGACTCTGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRSILHHHGNKSPPVTLSLTSS*CGLCPS Trigger: AGACGGACAGAGTCCACACCAGCTGGAAGTGAGACT...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCCAGTCACCTTGGGATTCTACTCCTAATCCAGGTAGCCTGGGCTCTGAGTCTCACTTCCAGCTaGTGTGGACTCTGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPSSHLGILLLIQVAWALSLTSS*CGLCPS Trigger: AGACGGACAGAGTCCACACCAGCTGGAAGTGAGACT...CAGAGCCCAGGCTACCTGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGCCTCCCAGGTGCCATTaGTGGTGCTATTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGGTAFHISYGSHLLPARPPRCH*WCYSRV Trigger: AACCCTGGAATAGCACCATCAATGGCACCTGGGAGG...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | TGCTACTCTTGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGCTGCAGCTGAGGTCAAGTaGTCGGAAGGAGTAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CYSWDRKMSILSPCQVRAAAEVK*SEGVVE Trigger: CTCTACTACTCCTTCCGATCACTTGACCTCAGCTGC...AGCTCTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | CCTAGGTACCTTGGCAGGAATGGCAGCTGTCTGCATAGGAGTCGGGTGGCACTGGTCGTCACTGCTGACTaGCAAATCTTTCCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRYLGRNGSCLHRSRVALVVTAD*QIFPHS Trigger: ACTGTGAGGAAAGATTTGTCAGTCAGCAGTGACGAC...CAGTGCCACCCGACTCCTATGCAGACAGCTGCCATTCCTGCCAAGGTACCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGTACCAAGGCAATGGTaGGCACAGACTTGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYKLWFPPAASQGSLQGVPRQW*AQTCAW Trigger: CCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTAC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCGTACCAAGGCAATGGTaGGCACAGACTTGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSILHHHGNKSPPVTLGFVPRQW*AQTCAW Trigger: CCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTAC...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYKLWFPPAASQGSLQGDKSLP*QEVEYR Trigger: CCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTC...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | CAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCCTCCTCACTTCCAGCTGGTGTaGACTCTGTCCGTCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGPDISSQRFVSWPEGPPHFQLV*TLSVLS Trigger: ACTCAAGACGGACAGAGTCCACACCAGCTGGAAGTG...AGGAGGACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCAGTCTCACTTCCAGCTaGTGTGGACTCTGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRDLTLALRGLSLGLRVSLTSS*CGLCPS Trigger: AGACGGACAGAGTCCACACCAGCTGGAAGTGAGACT...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATAGTCTCACTTCCAGCTaGTGTGGACTCTGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDSLTSS*CGLCPS Trigger: AGACGGACAGAGTCCACACCAGCTGGAAGTGAGACT...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | AATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGCCTCCCAGGTGCCATTaGTGGTGCTATTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGWHSLSYKLWFPPAASQPPRCH*WCYSRV Trigger: AACCCTGGAATAGCACCATCAATGGCACCTGGGAGG...CTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | CCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTCCCAGGTGCCATTaGTGGTGCTATTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAQPNGWHSLSYKLWFPPPRCH*WCYSRV Trigger: AACCCTGGAATAGCACCATCAATGGCACCTGGGAGG...TGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | ACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTGACGCAGCTGAGGTCAAGTaGTCGGAAGGAGTAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTEGRQEAEITGLCVGGDAAEVK*SEGVVE Trigger: CTCTACTACTCCTTCCGATCACTTGACCTCAGCTGC...GTCACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | TCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCTACTCCTGTACCAAGGCAATGGTaGGCACAGACTTGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYITMGTRALQSPWDSTPVPRQW*AQTCAW Trigger: CCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTAC...AGGAGTAGAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACACCGGGTGATCTTATATaGCATGTTGATGGCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISYGSHLLPARGVSRDLTPGDLI*HVDGVE Trigger: CTCAACGCCATCAACATGGCATATAAGATCACCCGG...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| 3UTR CAA 72 bp | GTACAAATGATTGGGGACTTTGGAGTCCTGCTACTCTaGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQMIGDFGVLLL*GPQDEYPEPLP Trigger: TGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCAGGACTCCAAAGTCCCCAATCATTTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR TCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGTCGTCACTGCTGACTaGCAAATCTTTCCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYKLWFPPAASQGSLQGPVVTAD*QIFPHS Trigger: ACTGTGAGGAAAGATTTGTCAGTCAGCAGTGACGAC...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR GCA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTCCGGGTGATCTTATATaGCATGTTGATGGCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SYKLWFPPAASQGSLQGPPGDLI*HVDGVE Trigger: CTCAACGCCATCAACATGGCATATAAGATCACCCGG...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATCCGGGTGATCTTATATaGCATGTTGATGGCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSYITMGTRALQSPWDPGDLI*HVDGVE Trigger: CTCAACGCCATCAACATGGCATATAAGATCACCCGG...ATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR GCA 90 bp | TGCTACTCTTGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGCTCCGGGTGATCTTATATaGCATGTTGATGGCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CYSWDRKMSILSPCQVRAPGDLI*HVDGVE Trigger: CTCAACGCCATCAACATGGCATATAAGATCACCCGG...AGCTCTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGTCGTCACTGCTGACTaGCAAATCTTTCCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: MGGTAFHISYGSHLLPARVVTAD*QIFPHS Trigger: ACTGTGAGGAAAGATTTGTCAGTCAGCAGTGACGAC...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| 3UTR CAA 72 bp | CCAGTTTCAGCTACATGGCTAATTCAAAGTCCGCCTTaGGTTCTCCGAGATGAGCCTCATCAGCTACACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSATWLIQSPP*VLRDEPHQLHY Trigger: GTAGTGTAGCTGATGAGGCTCATCTCGGAGAACCAAAGGCGGACTTTGAATTAGCCATGTAGCTGAAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037540.5 ENSMUST00000208340.2 |
||
| CDS CCA 90 bp | GCCCAGCTTGCGACGAGCCTGTGGGCTGGGGGTAGGCTCCGTGGGTaGCTTGGCATCTCGGGCAAAGCGGACAAGTCTCTGCCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQLATSLWAGGRLRG*LGISGKADKSLPCQ Trigger: CTGGCAGGGCAGAGACTTGTCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGCCTACCCCCAGCCCACAGGCTCGTCGCAAGCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCGGCTCCGTGGGTGGCTaGGCATCTCGGGCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGGSVGG*ASRAKR Trigger: CCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGCC...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCCTGTGCAGGCCCAGCTaGCGACGAGCCTGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGLCRPS*RRACGL Trigger: CAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAG...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CCA 90 bp | CACAGTTCTGTTAGGCCTGTGCAGGCCCAGCTTGCGACGAGCCTGTaGGCTGGGGGTAGGCTCCGTGGGTGGCTTGGCATCTCGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSSVRPVQAQLATSL*AGGRLRGWLGISGK Trigger: TTTGCCCGAGATGCCAAGCCACCCACGGAGCCTACCCCCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAGGCCTAACAGAACTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCGGCTCCGTGGGTGGCTaGGCATCTCGGGCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TASQVMPQSTAQWVAQPFGSVGG*ASRAKR Trigger: CCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGCC...GAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCTGCTTCCCCCTTGGATCTGGGAGGCTGAACCTCAGCCTAGGTACCTTGGCTCCGTGGGTGGCTaGGCATCTCGGGCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLLPPWIWEAEPQPRYLGSVGG*ASRAKR Trigger: CCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGCC...AAGGTACCTAGGCTGAGGTTCAGCCTCCCAGATCCAAGGGGGAAGCAGGCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 90 bp | AGAGGGCGAAGACGGCCAGTACCAAGGCAATGGTGCGCACAGACTTaGGCTTGGCCCGAGGCAGACCTCCTGTGGTCCCATAAGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGRRRPVPRQWCAQT*AWPEADLLWSHKPV Trigger: AACCGGCTTATGGGACCACAGGAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGGCCGTCTTCGCCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | ATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACACTGTGCAGGCCCAGCTaGCGACGAGCCTGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISYGSHLLPARGVSRDLTLCRPS*RRACGL Trigger: CAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAG...TGTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 90 bp | CGTGGGTGGCTTGGCATCTCGGGCAAAGCGGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGGGTCAAGACAACTGTTGGCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGWLGISGKADKSLP*QEVEYRVKTTVGAG Trigger: GCCAGCGCCAACAGTTGTCTTGACCCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTCCGCTTTGCCCGAGATGCCAAGCCACCCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCTGAGCTAAGTCCATCGTGCCCAGGTCCATCCTACATCACCATGGGAGGGTCAAGACAACTGTaGGCGCTGGCCAGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSELSPSCPGPSYITMGGSRQL*ALASGR Trigger: CCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACCC...TCCCATGGTGATGTAGGATGGACCTGGGCACGATGGACTTAGCTCAGAGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCCTCCTGGGTCAAGACAACTGTaGGCGCTGGCCAGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QGPDISSQRFVSWPEGPPGSRQL*ALASGR Trigger: CCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACCC...AGGAGGACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTCCAGTCACCTTGGGATTCTACTCCTAATCCAGGTAGCCTGGGCTCTGATGGTGCGCACAGACTaGCGCTTGGCCCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPSSHLGILLLIQVAWALMVRTD*RLARGR Trigger: TCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCAT...CAGAGCCCAGGCTACCTGGATTAGGAGTAGAATCCCAAGGTGACTGGAGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGATGGTGCGCACAGACTaGCGCTTGGCCCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPRSILHHHGNKSPPVTLMVRTD*RLARGR Trigger: TCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCAT...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCGGGTCAAGACAACTGTaGGCGCTGGCCAGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSILHHHGNKSPPVTLGFGSRQL*ALASGR Trigger: CCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACCC...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGGTCAAGACAACTGTaGGCGCTGGCCAGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MGGTAFHISYGSHLLPARGSRQL*ALASGR Trigger: CCGGCCGCTGGCCAGCGCCAACAGTTGTCTTGACCC...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTCTGTGCAGGCCCAGCTaGCGACGAGCCTGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTEGRQEAEITGLCVGGLCRPS*RRACGL Trigger: CAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAG...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACTGTGCAGGCCCAGCTaGCGACGAGCCTGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSYKLWFPPAASQGSLQGLCRPS*RRACGL Trigger: CAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAG...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGAATGGTGCGCACAGACTaGCGCTTGGCCCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSYKLWFPPAASQGSLQGMVRTD*RLARGR Trigger: TCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCAT...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGTGACAGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCATCTTATATGCCATGTaGATGGCGTTGAGGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGGDSFPGHAPEHSPMGGILYAM*MALRVW Trigger: CCACACCCTCAACGCCATCAACATGGCATATAAGAT...GCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCTGTCACCACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | TGCTACTCTTGGGACCGCAAGATGAGTATCCTGAGCCCCTGCCAAGTGAGAGCTCCCTCCCAGGTGCCATaGATGGTGCTATTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CYSWDRKMSILSPCQVRAPSQVP*MVLFQG Trigger: ACCCTGGAATAGCACCATCAATGGCACCTGGGAGGG...AGCTCTCACTTGGCAGGGGCTCAGGATACTCATCTTGCGGTCCCAAGAGTAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | AGCTTCCCAGGTCATGCCCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATGAGGCGTTCCAGGTTTaGAGGCGGCATAGGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SFPGHAPEHSPMGGTAFHEAFQV*RRHRKI Trigger: TATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTC...ATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGGGCATGACCTGGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | CCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCAATGGTGCGCACAGACTaGCGCTTGGCCCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAQPNGWHSLSYKLWFPMVRTD*RLARGR Trigger: TCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCAT...TGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCCCCTCCCAGGTGCCATaGATGGTGCTATTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAFHISYGSHLLPARGVSPSQVP*MVLFQG Trigger: ACCCTGGAATAGCACCATCAATGGCACCTGGGAGGG...GGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | CTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCCTCCCAGGTGCCATaGATGGTGCTATTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSYKLWFPPAASQGSLQGPSQVP*MVLFQG Trigger: ACCCTGGAATAGCACCATCAATGGCACCTGGGAGGG...TCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGCCCTCCCAGGTGCCATaGATGGTGCTATTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MGGTAFHISYGSHLLPARPSQVP*MVLFQG Trigger: ACCCTGGAATAGCACCATCAATGGCACCTGGGAGGG...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | TATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGACGAGGCGTTCCAGGTTTaGAGGCGGCATAGGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: YKLWFPPAASQGSLQGPDEAFQV*RRHRKI Trigger: TATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTC...GTCAGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGAGGCGTTCCAGGTTTaGAGGCGGCATAGGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VPRSILHHHGNKSPPVTLEAFQV*RRHRKI Trigger: TATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTC...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGAGGAAACGCACCAGCTaGCAGAGCACCGTGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPRSILHHHGNKSPPVTLRKRTS*QSTVLN Trigger: ATTTAGCACGGTGCTCTGCAAGCTGGTGCGTTTCCT...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 90 bp | ATAAACCAACAGCGGCAGGGACGCTGCGTAGAGAGAGTCCGAAACTaGCAGGTGAAACATGTAGGTGGTGGAGGCGTTCCAGGTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: INQQRQGRCVERVRN*QVKHVGGGGVPGFE Trigger: CTCAAAACCTGGAACGCCTCCACCACCTACATGTTTCACCTGGCAGTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTGTTGGTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGCAACAGCACGTACTaGAAGTCCTCGTTGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: VPRSILHHHGNKSPPVTLGNSTY*KSSLKR Trigger: TCGTTTCAACGAGGACTTCAAGTACGTGCTGTTGCC...CAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCTGGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCGAGGCGTTCCAGGTTTaGAGGCGGCATAGGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VSRDLTLALRGLSLGLRVEAFQV*RRHRKI Trigger: TATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTC...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCTGAGCTAAGTCCATCGTGCCCAGGTCCATCCTACATCACCATGGGAAGGAAACGCACCAGCTaGCAGAGCACCGTGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSELSPSCPGPSYITMGRKRTS*QSTVLN Trigger: ATTTAGCACGGTGCTCTGCAAGCTGGTGCGTTTCCT...TCCCATGGTGATGTAGGATGGACCTGGGCACGATGGACTTAGCTCAGAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | TCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGAGTCTCCAGGGACCTGGCAACAGCACGTACTaGAAGTCCTCGTTGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: SYKLWFPPAASQGSLQGPGNSTY*KSSLKR Trigger: TCGTTTCAACGAGGACTTCAAGTACGTGCTGTTGCC...AGGTCCCTGGAGACTCCCCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | CCTACTACTGAAGGAAGGCAGGAGGCAGAGATAACAGGCCTTTGTGTGGGTGGTAGGAAACGCACCAGCTaGCAGAGCACCGTGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTTEGRQEAEITGLCVGGRKRTS*QSTVLN Trigger: ATTTAGCACGGTGCTCTGCAAGCTGGTGCGTTTCCT...ACCACCCACACAAAGGCCTGTTATCTCTGCCTCCTGCCTTCCTTCAGTAGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS-3UTR CAA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCAGGAAACGCACCAGCTaGCAGAGCACCGTGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSILHHHGNKSPPVTLGFRKRTS*QSTVLN Trigger: ATTTAGCACGGTGCTCTGCAAGCTGGTGCGTTTCCT...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS TCA 90 bp | AAACTGCCAGGTGAAACATGTAGGTGGTGGAGGCGTTCCAGGTTTTaGGGCGGCATAGGAAGATATAGAGAGCCACGACGTTCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KLPGETCRWWRRSRF*GGIGRYREPRRSGT Trigger: TGTGCCTGAACGTCGTGGCTCTCTATATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTCCACCACCTACATGTTTCACCTGGCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCACCTGCTGCCAGCCAGGGGCAACAGCACGTACTaGAAGTCCTCGTTGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: MGGTAFHISYGSHLLPARGNSTY*KSSLKR Trigger: TCGTTTCAACGAGGACTTCAAGTACGTGCTGTTGCC...CCTGGCTGGCAGCAGGTGGGAACCATAACTTATATGAAAGGCTGTGCCACCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGGGACCTGACATTAGCTCTCAGAGGTTTGTCTCTTGGCCTGAGGGTCATCTTATATGCCATGTaGATGGCGTTGAGGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSRDLTLALRGLSLGLRVILYAM*MALRVW Trigger: CCACACCCTCAACGCCATCAACATGGCATATAAGAT...GACCCTCAGGCCAAGAGACAAACCTCTGAGAGCTAATGTCAGGTCCCTGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGCACAGCCCAATGGGTGGCACAGCCTTTCATATAAGTTATGGTTCCCAGGCAACAGCACGTACTaGAAGTCCTCGTTGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAQPNGWHSLSYKLWFPGNSTY*KSSLKR Trigger: TCGTTTCAACGAGGACTTCAAGTACGTGCTGTTGCC...TGGGAACCATAACTTATATGAAAGGCTGTGCCACCCATTGGGCTGTGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCCATCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCATCTTATATGCCATGTaGATGGCGTTGAGGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSILHHHGNKSPPVTLGFILYAM*MALRVW Trigger: CCACACCCTCAACGCCATCAACATGGCATATAAGAT...GAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGATGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS-3UTR CAA 90 bp | TCCTACATCACCATGGGAACAAGAGCCCTCCAGTCACCTTGGGATTCTACTCCTTACTTGAAGTCCTCGTaGAAACGACACTTGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYITMGTRALQSPWDSTPYLKSS*KRHLYP Trigger: GGGATACAAGTGTCGTTTCAACGAGGACTTCAAGTA...AGGAGTAGAATCCCAAGGTGACTGGAGGGCTCTTGTTCCCATGGTGATGTAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
||
| CDS CCA 72 bp | GTTAGGCCTGTGCAGGCCCAGCTTGCGACGAGCCTGTaGGCTGGGGGTAGGCTCCGTGGGTGGCTTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VRPVQAQLATSL*AGGRLRGWLGI Trigger: GATGCCAAGCCACCCACGGAGCCTACCCCCAGCCCACAGGCTCGTCGCAAGCTGGGCCTGCACAGGCCTAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 90 bp | AGCTTGCGACGAGCCTGTGGGCTGGGGGTAGGCTCCGTGGGTGGCTaGGCATCTCGGGCAAAGCGGACAAGTCTCTGCCCTGCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLRRACGLGVGSVGG*ASRAKRTSLCPARK Trigger: CTTCCTGGCAGGGCAGAGACTTGTCCGCTTTGCCCGAGATGCCAAGCCACCCACGGAGCCTACCCCCAGCCCACAGGCTCGTCGCAAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 72 bp | AGCAGAGGGCGAAGACGGCCAGTACCAAGGCAATGGTaGGCACAGACTTGCGCTTGGCCCGAGGCAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: SRGRRRPVPRQW*AQTCAWPEADL Trigger: GAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGGCCGTCTTCGCCCTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CCA 72 bp | GGAAGCAGAGGGCGAAGACGGCCAGTACCAAGGCAATaGTGCGCACAGACTTGCGCTTGGCCCGAGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSRGRRRPVPRQ*CAQTCAWPEAD Trigger: GTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGGCCGTCTTCGCCCTCTGCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 72 bp | AGACGGCCAGTACCAAGGCAATGGTGCGCACAGACTTaGGCTTGGCCCGAGGCAGACCTCCTGTGGTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RRPVPRQWCAQT*AWPEADLLWSH Trigger: ATGGGACCACAGGAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGGCCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CCA 72 bp | CCAGTACCAAGGCAATGGTGCGCACAGACTTGCGCTTaGCCCGAGGCAGACCTCCTGTGGTCCCATAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: PVPRQWCAQTCA*PEADLLWSHKP Trigger: CGGCTTATGGGACCACAGGAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 72 bp | AAGACGGCCAGTACCAAGGCAATGGTGCGCACAGACTaGCGCTTGGCCCGAGGCAGACCTCCTGTGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: KTASTKAMVRTD*RLARGRPPVVP Trigger: TGGGACCACAGGAGGTCTGCCTCGGGCCAAGCGCAAGTCTGTGCGCACCATTGCCTTGGTACTGGCCGTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 72 bp | CAGCGGCAGGGACGCTGCGTAGAGAGAGTCCGAAACTaGCAGGTGAAACATGTAGGTGGTGGAGGCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QRQGRCVERVRN*QVKHVGGGGVP Trigger: TGGAACGCCTCCACCACCTACATGTTTCACCTGGCAGTTTCGGACTCTCTCTACGCAGCGTCCCTGCCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 72 bp | ACTGTTGGCGCTGGCCAGCGGCCGGGTGATCTTATATaGCATGTTGATGGCGTTGAGGGTGTGGCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TVGAGQRPGDLI*HVDGVEGVAAE Trigger: CTCAGCTGCCACACCCTCAACGCCATCAACATGGCATATAAGATCACCCGGCCGCTGGCCAGCGCCAACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 72 bp | GCGCTGGCCAGCGGCCGGGTGATCTTATATGCCATGTaGATGGCGTTGAGGGTGTGGCAGCTGAGGTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: ALASGRVILYAM*MALRVWQLRSS Trigger: ACTTGACCTCAGCTGCCACACCCTCAACGCCATCAACATGGCATATAAGATCACCCGGCCGCTGGCCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 90 bp | CAACTGTTGGCGCTGGCCAGCGGCCGGGTGATCTTATATGCCATGTaGATGGCGTTGAGGGTGTGGCAGCTGAGGTCAAGTGATCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QLLALASGRVILYAM*MALRVWQLRSSDRK Trigger: CTTCCGATCACTTGACCTCAGCTGCCACACCCTCAACGCCATCAACATGGCATATAAGATCACCCGGCCGCTGGCCAGCGCCAACAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 72 bp | CACTTGTATCCCAGTTCGTCCCCCTCCCAGGTGCCATaGATGGTGCTATTCCAGGGTTCCAGGTCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLYPSSSPSQVP*MVLFQGSRSAA Trigger: GGCAGCAGACCTGGAACCCTGGAATAGCACCATCAATGGCACCTGGGAGGGGGACGAACTGGGATACAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS TCA 72 bp | ACTTGTATCCCAGTTCGTCCCCCTCCCAGGTGCCATTaGTGGTGCTATTCCAGGGTTCCAGGTCTGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TCIPVRPPPRCH*WCYSRVPGLLP Trigger: TGGCAGCAGACCTGGAACCCTGGAATAGCACCATCAATGGCACCTGGGAGGGGGACGAACTGGGATACAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS GCA 72 bp | CTTGGCATCTCGGGCAAAGCGGACAAGTCTCTGCCCTaGCAGGAAGTAGAGTACCGGGTCAAGACAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: LGISGKADKSLP*QEVEYRVKTTV Trigger: AACAGTTGTCTTGACCCGGTACTCTACTTCCTGGCAGGGCAGAGACTTGTCCGCTTTGCCCGAGATGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CCA 72 bp | GAGGAAACGCACCAGCTTGCAGAGCACCGTGCTAAATaGCCAGTGGTCACCCCGGGCGTAGTAATAAACCAA | + |
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Preference number: 6 (lower is better) Translates to: EETHQLAEHRAK*PVVTPGVVINQ Trigger: TTGGTTTATTACTACGCCCGGGGTGACCACTGGCCATTTAGCACGGTGCTCTGCAAGCTGGTGCGTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 90 bp | GACACGGGCAACAGCACGTACTTGAAGTCCTCGTTGAAACGACACTaGTATCCCAGTTCGTCCCCCTCCCAGGTGCCATTGATGGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: DTGNSTYLKSSLKRH*YPSSSPSQVPLMVL Trigger: TAGCACCATCAATGGCACCTGGGAGGGGGACGAACTGGGATACAAGTGTCGTTTCAACGAGGACTTCAAGTACGTGCTGTTGCCCGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS TCA 72 bp | GGTGAAACATGTAGGTGGTGGAGGCGTTCCAGGTTTTaGGGCGGCATAGGAAGATATAGAGAGCCACGACGT | + |
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Preference number: 6 (lower is better) Translates to: GETCRWWRRSRF*GGIGRYREPRR Trigger: ACGTCGTGGCTCTCTATATCTTCCTATGCCGCCTCAAAACCTGGAACGCCTCCACCACCTACATGTTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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| CDS CAA 72 bp | AACAGCACGTACTTGAAGTCCTCGTTGAAACGACACTaGTATCCCAGTTCGTCCCCCTCCCAGGTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: NSTYLKSSLKRH*YPSSSPSQVPL Trigger: CAATGGCACCTGGGAGGGGGACGAACTGGGATACAAGTGTCGTTTCAACGAGGACTTCAAGTACGTGCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037540.5 ENSMUST00000178340.3 ENSMUST00000207916.2 ENSMUST00000208340.2 |
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