Pregenerated sensors for P2RY14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036381Ensembl transcript IDs: ENSMUST00000065220.13, ENSMUST00000091112.6, ENSMUST00000196081.5, ENSMUST00000197220.2, ENSMUST00000197841.2, ENSMUST00000200358.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTGTGGTCACTTTGTGTCATGGCCTCATCTACAGAAGCCCAAATaGGATGTTCCCATGGCCTCTTTAGCTACACTGGGGTTGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FCGHFVSWPHLQKPK*DVPMASLATLGLPA Trigger: TGCAGGCAACCCCAGTGTAGCTAAAGAGGCCATGGGAACATCTCATTTGGGCTTCTGTAGATGAGGCCATGACACAAAGTGACCACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR GCA 90 bp | GCATGCACCACTTGTTTCTTAGCTGTGGTTTGCAGCCTCCTTATCTaGCTGATATGTCGTTTCCTAAACCTTCTGGCTTTCCTGTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: ACTTCFLAVVCSLLI*LICRFLNLLAFLLV Trigger: AACTAACAGGAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAACCACAGCTAAGAAACAAGTGGTGCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR CCA 90 bp | AAGTTGGATGTTTCCCATTTCTGTGTGAGCACCTTTCTTGCATTGTaGTGTGTGACTAAGCTTACTGTACTGACCCATTGTGCGGAAACC | + |
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Preference number: 1 (lower is better) Translates to: KLDVSHFCVSTFLAL*CVTKLTVLTHCAET Trigger: GGTTTCCGCACAATGGGTCAGTACAGTAAGCTTAGTCACACACCACAATGCAAGAAAGGTGCTCACACAGAAATGGGAAACATCCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR TCA 90 bp | CAAGGACAAGTTTCATTTGTATTGTGGAGAAAAGAGGTTAGAGGTTaGAGAGAGAACTCATGTGACCCAAGCCTTACTTGGTCCCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: QGQVSFVLWRKEVRG*RENSCDPSLTWSLS Trigger: AGAAAGGGACCAAGTAAGGCTTGGGTCACATGAGTTCTCTCTTCAACCTCTAACCTCTTTTCTCCACAATACAAATGAAACTTGTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTAATCCGCCGCCGCCAGCACACTGCCCCATCATGTCTAGTTGTTCCTGCCAAGTCAGAGACAAGTTaGATGTTTCCCATTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RLIRRRQHTAPSCLVVPAKSETS*MFPISV Trigger: CACAGAAATGGGAAACATCCAACTTGTCTCTGACTT...GGCAGGAACAACTAGACATGATGGGGCAGTGTGCTGGCGGCGGCGGATTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTCTGTGGTCACTTTGTGTCATGGCCTCATCTACAGAAGCCCAAATGAGAGACCCAAGCCTTACTTaGTCCCTTTCTTCCCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ELLWSLCVMASSTEAQMRDPSLT*SLSSPA Trigger: AGCAGGGGAAGAAAGGGACCAAGTAAGGCTTGGGTC...TCTCATTTGGGCTTCTGTAGATGAGGCCATGACACAAAGTGACCACAGAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR CAA 90 bp | GACAAGTTGGATGTTTCCCATTTCTGTGTGAGCACCTTTCTTGCATaGTGGTGTGTGACTAAGCTTACTGTACTGACCCATTGTGCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DKLDVSHFCVSTFLA*WCVTKLTVLTHCAE Trigger: TTCCGCACAATGGGTCAGTACAGTAAGCTTAGTCACACACCACAATGCAAGAAAGGTGCTCACACAGAAATGGGAAACATCCAACTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAGCTGCTCTTCACACGTTGATTATTAATAAAACAACATTCCTGATGGTTAGACAACTTGTTTATTaGCACATGCATAGTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PGAALHTLIINKTTFLMVRQLVY*HMHSTK Trigger: CTTTGTACTATGCATGTGCCAATAAACAAGTTGTCT...AACCATCAGGAATGTTGTTTTATTAATAATCAACGTGTGAAGAGCAGCTCCCGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR TCA 72 bp | GAGGAGATGTGCTCTGGCTATTCGAGCTATGAAGGATaGCAAACACAGCCCCCTTCCCATCCCCCACATGCA | + |
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Preference number: 3 (lower is better) Translates to: EEMCSGYSSYEG*QTQPPSHPPHA Trigger: TGCATGTGGGGGATGGGAAGGGGGCTGTGTTTGTCATCCTTCATAGCTCGAATAGCCAGAGCACATCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGCCTTACTTGGTCCCTTTCTTCCCCTGCTGTGAGGAGATGTGCTCTGGCAGCACCTTTCTTGCATaGTGGTGTGTGACTAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: PKPYLVPFFPCCEEMCSGSTFLA*WCVTKL Trigger: AAGCTTAGTCACACACCACAATGCAAGAAAGGTGCT...GCCAGAGCACATCTCCTCACAGCAGGGGAAGAAAGGGACCAAGTAAGGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR TCA 72 bp | CACTTTGTGTCATGGCCTCATCTACAGAAGCCCAAATaGGATGTTCCCATGGCCTCTTTAGCTACACTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HFVSWPHLQKPK*DVPMASLATLG Trigger: CCCCAGTGTAGCTAAAGAGGCCATGGGAACATCTCATTTGGGCTTCTGTAGATGAGGCCATGACACAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCACCAAGACCTTCTGTCAGATCTGGGTGAAAGTGTGAACAGGACTTACGGCAAGAGAAGTTTGGTTTaGGTAACTCATACGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHQDLLSDLGESVNRTYGKRSLV*VTHTPA Trigger: TGCTGGCGTATGAGTTACCAAAACCAAACTTCTCTT...GCCGTAAGTCCTGTTCACACTTTCACCCAGATCTGACAGAAGGTCTTGGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTCCTAAACCTTCTGGCTTTCAGATACGAGTGTTGCTaGGAAGAATGCTTAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VCSLLICLICRFLNLLAFRYECC*EECLGG Trigger: TCCTCCTAAGCATTCTTCCAAGCAACACTCGTATCT...GAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR GCA 72 bp | ACTTGTTTCTTAGCTGTGGTTTGCAGCCTCCTTATCTaGCTGATATGTCGTTTCCTAAACCTTCTGGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: TCFLAVVCSLLI*LICRFLNLLAF Trigger: GAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAACCACAGCTAAGAAACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR CCA 72 bp | GTTTCCCATTTCTGTGTGAGCACCTTTCTTGCATTGTaGTGTGTGACTAAGCTTACTGTACTGACCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: VSHFCVSTFLAL*CVTKLTVLTHC Trigger: ACAATGGGTCAGTACAGTAAGCTTAGTCACACACCACAATGCAAGAAAGGTGCTCACACAGAAATGGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR CCA 72 bp | TTTTGGCATAGTGGTGATAGAGGCCTAACGGGAGAGTaGCTTTCTCAAGGACAAGTTTCATTTGTATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FWHSGDRGLTGE*LSQGQVSFVLW Trigger: CCACAATACAAATGAAACTTGTCCTTGAGAAAGCCACTCTCCCGTTAGGCCTCTATCACCACTATGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTGTTTCTTAGCTGTGGTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTCAAGTCAGAGACAAGTaGGATGTTTCCCATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLFLSCGLQPPYLPDMSFQVRDK*DVSHFC Trigger: ACAGAAATGGGAAACATCCAACTTGTCTCTGACTTG...AAACGACATATCAGGCAGATAAGGAGGCTGCAAACCACAGCTAAGAAACAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTAAGAGAAGTTTGGTTTaGGTAACTCATACGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVKRSLV*VTHTPA Trigger: TGCTGGCGTATGAGTTACCAAAACCAAACTTCTCTT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CCCAAGCCTTACTTGGTCCCTTTCTTCCCCTGCTGTGAGGAGATGTGCTCTGGCCCGAGAGTAGCAGAGTaGATTCTTTCGCATAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKPYLVPFFPCCEEMCSGPRVAE*ILSHRA Trigger: TGCTCTATGCGAAAGAATTCACTCTGCTACTCTCGG...GCCAGAGCACATCTCCTCACAGCAGGGGAAGAAAGGGACCAAGTAAGGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | TGGTCCCTTTCTTCCCCTGCTGTGAGGAGATGTGCTCTGGCTATTCGAGCTATGCCTGGTTTGTCAGGATaGTGTTTGGGACAGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: WSLSSPAVRRCALAIRAMPGLSG*CLGQQG Trigger: TCCTTGCTGTCCCAAACATCATCCTGACAAACCAGG...CATAGCTCGAATAGCCAGAGCACATCTCCTCACAGCAGGGGAAGAAAGGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | AGTCACCAAGACCTTCTGTCAGATCTGGGTGAAAGTGTGAACAGGACTTACGGCGGAAAGTCAGGCCCATaGGAAAGTCAGCCACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SHQDLLSDLGESVNRTYGGKSGP*ESQPPL Trigger: TAGTGGTGGCTGACTTTCTCATGGGCCTGACTTTCC...GCCGTAAGTCCTGTTCACACTTTCACCCAGATCTGACAGAAGGTCTTGGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | AGGTTAATCCGCCGCCGCCAGCACACTGCCCCATCATGTCTAGTTGTTCCTGCCGTATCTGTGCTTTCATaGATCGCATTTTCCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLIRRRQHTAPSCLVVPAVSVLS*IAFSLL Trigger: CAAAAGGGAAAATGCGATTCATGAAAGCACAGATAC...GGCAGGAACAACTAGACATGATGGGGCAGTGTGCTGGCGGCGGCGGATTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR GCA 90 bp | GTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTCCTAAACCTTCTGGCTTTCACAAACACATTCACCTaGCAGGGGCCGAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCSLLICLICRFLNLLAFTNTFT*QGPRPE Trigger: CTCAGGCCTCGGCCCCTGGCAGGTGAATGTGTTTGT...GAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR GCA 90 bp | GCTATTCGAGCTATGAAGGATGACAAACACAGCCCCCTTCCCATCCCCCACATGGCACAGAAAGCAGCTTaGTATAGTTCACCGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: AIRAMKDDKHSPLPIPHMAQKAA*YSSPTA Trigger: TGCAGTCGGTGAACTATAGCAAGCTGCTTTCTGTGC...CATGTGGGGGATGGGAAGGGGGCTGTGTTTGTCATCCTTCATAGCTCGAATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | AGATGTTCCCATGGCCTCTTTAGCTACACTGGGGTTGCCTGCAGAGTGGTAGGTAAAGAATATCCATCCTaGTATCCCATTGAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RCSHGLFSYTGVACRVVGKEYPS*YPIEEE Trigger: CTCCTCCTCAATGGGATATCAGGATGGATATTCTTT...ACCTACCACTCTGCAGGCAACCCCAGTGTAGCTAAAGAGGCCATGGGAACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | TGGTCCCTTTCTTCCCCTGCTGTGAGGAGATGTGCTCTGGCTATTCGAGCTATGGGTCATTCTGGACTTTaGGTGACATGTGTAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: WSLSSPAVRRCALAIRAMGHSGL*VTCVTS Trigger: AGAAGTTACACATGTCACTCAAAGTCCAGAATGACC...CATAGCTCGAATAGCCAGAGCACATCTCCTCACAGCAGGGGAAGAAAGGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTCCAAACACACACACAGGGGCTGAGTCACCAAGACCTTCTGTCAGATCTGAGGGTCTGTGGTGGTaGAGTTGTTCATCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISPNTHTGAESPRPSVRSEGLWW*SCSSSH Trigger: GTGAGAAGATGAACAACTCCACCACCACAGACCCTC...AGATCTGACAGAAGGTCTTGGTGACTCAGCCCCTGTGTGTGTGTTTGGAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | TCACTTTGTGTCATGGCCTCATCTACAGAAGCCCAAATGAGATGTTCCCATGGCTTGGAGGGTCTGTGGTaGTGGAGTTGTTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLCVMASSTEAQMRCSHGLEGLW*WSCSSS Trigger: AGAAGATGAACAACTCCACCACCACAGACCCTCCAA...GCCATGGGAACATCTCATTTGGGCTTCTGTAGATGAGGCCATGACACAAAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | GTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTCCTAAACCTTCTGGCTTTCGGTTTGGAGGGTCTGTaGTGGTGGAGTTGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: VCSLLICLICRFLNLLAFGLEGL*WWSCSS Trigger: AGATGAACAACTCCACCACCACAGACCCTCCAAACC...GAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTCCAGGGGCCGAGGCCTaGGTCACCAAGGACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVPGAEA*VTKDFE Trigger: TTCAAAGTCCTTGGTGACTCAGGCCTCGGCCCCTGG...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR GCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTACAAACACATTCACCTaGCAGGGGCCGAGGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVTNTFT*QGPRPE Trigger: CTCAGGCCTCGGCCCCTGGCAGGTGAATGTGTTTGT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | CACTTGTTTCTTAGCTGTGGTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTTGTCAGGATGATGTTTaGGACAGCAAGGAGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HLFLSCGLQPPYLPDMSFCQDDV*DSKEKH Trigger: ATGCTTCTCCTTGCTGTCCCAAACATCATCCTGACA...AAACGACATATCAGGCAGATAAGGAGGCTGCAAACCACAGCTAAGAAACAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| 3UTR CAA 72 bp | GATGTTTCCCATTTCTGTGTGAGCACCTTTCTTGCATaGTGGTGTGTGACTAAGCTTACTGTACTGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: DVSHFCVSTFLA*WCVTKLTVLTH Trigger: ATGGGTCAGTACAGTAAGCTTAGTCACACACCACAATGCAAGAAAGGTGCTCACACAGAAATGGGAAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTGGAAAGTCAGGCCCATaGGAAAGTCAGCCACCACTA | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVGKSGP*ESQPPL Trigger: TAGTGGTGGCTGACTTTCTCATGGGCCTGACTTTCC...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTCCTGGTTTGTCAGGATaGTGTTTGGGACAGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVPGLSG*CLGQQG Trigger: TCCTTGCTGTCCCAAACATCATCCTGACAAACCAGG...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTCCGAGAGTAGCAGAGTaGATTCTTTCGCATAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVPRVAE*ILSHRA Trigger: TGCTCTATGCGAAAGAATTCACTCTGCTACTCTCGG...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR GCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTGCACAGAAAGCAGCTTaGTATAGTTCACCGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVAQKAA*YSSPTA Trigger: TGCAGTCGGTGAACTATAGCAAGCTGCTTTCTGTGC...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTTGTCAGGATGATGTTTaGGACAGCAAGGAGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVCQDDV*DSKEKH Trigger: ATGCTTCTCCTTGCTGTCCCAAACATCATCCTGACA...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTAAAGAATATCCATCCTaGTATCCCATTGAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVKEYPS*YPIEEE Trigger: CTCCTCCTCAATGGGATATCAGGATGGATATTCTTT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTGGTCATTCTGGACTTTaGGTGACATGTGTAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVGHSGL*VTCVTS Trigger: AGAAGTTACACATGTCACTCAAAGTCCAGAATGACC...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTACCTCTAGGTCATTCTaGACTTTGAGTGACATGTGT | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVTSRSF*TLSDMC Trigger: ACACATGTCACTCAAAGTCCAGAATGACCTAGAGGT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CCA 90 bp | GCTGCTCTTCACACGTTGATTATTAATAAAACAACATTCCTGATGGTTTTGAAGACCTCTAGGTCATTCTaGACTTTGAGTGACATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AALHTLIINKTTFLMVLKTSRSF*TLSDMC Trigger: ACACATGTCACTCAAAGTCCAGAATGACCTAGAGGT...CTTCAAAACCATCAGGAATGTTGTTTTATTAATAATCAACGTGTGAAGAGCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR TCA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTGTATCTGTGCTTTCATaGATCGCATTTTCCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVVSVLS*IAFSLL Trigger: CAAAAGGGAAAATGCGATTCATGAAAGCACAGATAC...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS TCA 90 bp | AGAGACCCTGCACACAAACACATTCACCTGCCAGGGGCCGAGGCCTaGGTCACCAAGGACTTTGAAAGGGAAAGTCAGGCCCATGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RDPAHKHIHLPGAEA*VTKDFERESQAHEK Trigger: TTTCTCATGGGCCTGACTTTCCCTTTCAAAGTCCTTGGTGACTCAGGCCTCGGCCCCTGGCAGGTGAATGTGTTTGTGTGCAGGGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 ENSMUST00000200358.2 |
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| CDS CCA 90 bp | TATCTTCGTGACCTCCTTGACACCCTGGTTTGTCAGGATGATGTTTaGGACAGCAAGGAGAAGCATGAGCATCCACACGAGCACAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: YLRDLLDTLVCQDDV*DSKEKHEHPHEHRK Trigger: CTTTCTGTGCTCGTGTGGATGCTCATGCTTCTCCTTGCTGTCCCAAACATCATCCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CCA 90 bp | TTTTTGAGCTCCATGCACTGTATCTTCGTGACCTCCTTGACACCCTaGTTTGTCAGGATGATGTTTGGGACAGCAAGGAGAAGCATGAGC | + |
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Preference number: 5 (lower is better) Translates to: FLSSMHCIFVTSLTP*FVRMMFGTARRSMS Trigger: GCTCATGCTTCTCCTTGCTGTCCCAAACATCATCCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGATACAGTGCATGGAGCTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | GTTTGCAGCCTCCTTATCTGCCTGATATGTCGTTTCCTAAACCTTCTGGCTTTCATCTTCGTGACCTCCTaGACACCCTGGTTTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VCSLLICLICRFLNLLAFIFVTS*TPWFVR Trigger: CCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGAT...GAAAGCCAGAAGGTTTAGGAAACGACATATCAGGCAGATAAGGAGGCTGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | ATTTCTCCAAACACACACACAGGGGCTGAGTCACCAAGACCTTCTGTCAGATCTATCGCATTTTCCCTTTaGGTTTTGGAAACCTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ISPNTHTGAESPRPSVRSIAFSL*VLETSR Trigger: CCTAGAGGTTTCCAAAACCAAAAGGGAAAATGCGAT...AGATCTGACAGAAGGTCTTGGTGACTCAGCCCCTGTGTGTGTGTTTGGAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | ATAGGAGTACTCATTCGGGCAAGTCAGAGACAAGTTGGATGTTTCCCATTTCTGAGGTCATTCTGGACTTaGAGTGACATGTGTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: IGVLIRASQRQVGCFPFLRSFWT*SDMCNF Trigger: GAAGTTACACATGTCACTCAAAGTCCAGAATGACCT...CAGAAATGGGAAACATCCAACTTGTCTCTGACTTGCCCGAATGAGTACTCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTGAGTCACCAAGGACTTaGAAAGGGAAAGTCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVESPRT*KGKVRP Trigger: GGGCCTGACTTTCCCTTTCAAAGTCCTTGGTGACTC...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTCTTCACACGTTGATTATTAATAAAACAACATTCCTGATGGTTTTGAAGGAGTCACCAAGGACTTaGAAAGGGAAAGTCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: AALHTLIINKTTFLMVLKESPRT*KGKVRP Trigger: GGGCCTGACTTTCCCTTTCAAAGTCCTTGGTGACTC...CTTCAAAACCATCAGGAATGTTGTTTTATTAATAATCAACGTGTGAAGAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTATCTTCGTGACCTCCTaGACACCCTGGTTTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVIFVTS*TPWFVR Trigger: CCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGAT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTCTTCCGTCTGACTCTTaGTGTAGGGGATTCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVLPSDS*CRGFWQ Trigger: TTGCCAGAATCCCCTACACAAAGAGTCAGACGGAAG...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTAGGTCATTCTGGACTTaGAGTGACATGTGTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVRSFWT*SDMCNF Trigger: GAAGTTACACATGTCACTCAAAGTCCAGAATGACCT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTTATTGGCACATGCATAGTACAAAGCATGAAATAGATACGAGTGTTATCGCATTTTCCCTTTaGGTTTTGGAAACCTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: QLVYWHMHSTKHEIDTSVIAFSL*VLETSR Trigger: CCTAGAGGTTTCCAAAACCAAAAGGGAAAATGCGAT...AACACTCGTATCTATTTCATGCTTTGTACTATGCATGTGCCAATAAACAAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197841.2 |
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| CDS GCA 72 bp | ATGACGGCAGAGACCCTGCACACAAACACATTCACCTaGCAGGGGCCGAGGCCTGAGTCACCAAGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: MTAETLHTNTFT*QGPRPESPRTL Trigger: CAAAGTCCTTGGTGACTCAGGCCTCGGCCCCTGGCAGGTGAATGTGTTTGTGTGCAGGGTCTCTGCCGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 ENSMUST00000200358.2 |
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| CDS CCA 72 bp | GGGTGTTCCAGGAGCAGGGCTGGTTTGGAGGGTCTGTaGTGGTGGAGTTGTTCATCTTCTCACCTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GCSRSRAGLEGL*WWSCSSSHLWR Trigger: CCTCCAGAGGTGAGAAGATGAACAACTCCACCACCACAGACCCTCCAAACCAGCCCTGCTCCTGGAACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS CCA 72 bp | TCCAGGAGCAGGGCTGGTTTGGAGGGTCTGTGGTGGTaGAGTTGTTCATCTTCTCACCTCTGGAGGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRSRAGLEGLWW*SCSSSHLWRQR Trigger: TCTTTGCCTCCAGAGGTGAGAAGATGAACAACTCCACCACCACAGACCCTCCAAACCAGCCCTGCTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS CCA 72 bp | TGTTCCAGGAGCAGGGCTGGTTTGGAGGGTCTGTGGTaGTGGAGTTGTTCATCTTCTCACCTCTGGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CSRSRAGLEGLW*WSCSSSHLWRQ Trigger: TTGCCTCCAGAGGTGAGAAGATGAACAACTCCACCACCACAGACCCTCCAAACCAGCCCTGCTCCTGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197841.2 |
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| CDS CAA 90 bp | AACACATTCACCTGCCAGGGGCCGAGGCCTGAGTCACCAAGGACTTaGAAAGGGAAAGTCAGGCCCATGAGAAAGTCAGCCACCACTATG | + |
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Preference number: 6 (lower is better) Translates to: NTFTCQGPRPESPRT*KGKVRPMRKSATTM Trigger: CATAGTGGTGGCTGACTTTCTCATGGGCCTGACTTTCCCTTTCAAAGTCCTTGGTGACTCAGGCCTCGGCCCCTGGCAGGTGAATGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 ENSMUST00000200358.2 |
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| CDS TCA 72 bp | GGTCCAGACACACATTGGCAGCCGAGAGTAGCAGAGTaGATTCTTTCGCATAGAGCAGGGTCTCCTTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPDTHWQPRVAE*ILSHRAGSPSS Trigger: GGACGAAGGAGACCCTGCTCTATGCGAAAGAATTCACTCTGCTACTCTCGGCTGCCAATGTGTGTCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CAA 72 bp | TTAGACGCCTTGTGCCACTTCCGCCCCAGCTCGTTTTaGAGCTCCATGCACTGTATCTTCGTGACCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LDALCHFRPSSF*SSMHCIFVTSL Trigger: CAAGGAGGTCACGAAGATACAGTGCATGGAGCTCAAAAACGAGCTGGGGCGGAAGTGGCACAAGGCGTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CCA 72 bp | GACCTCCTTGACACCCTGGTTTGTCAGGATGATGTTTaGGACAGCAAGGAGAAGCATGAGCATCCACACGAG | + |
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Preference number: 6 (lower is better) Translates to: DLLDTLVCQDDV*DSKEKHEHPHE Trigger: CTCGTGTGGATGCTCATGCTTCTCCTTGCTGTCCCAAACATCATCCTGACAAACCAGGGTGTCAAGGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CAA 90 bp | CCCAGCTCGTTTTTGAGCTCCATGCACTGTATCTTCGTGACCTCCTaGACACCCTGGTTTGTCAGGATGATGTTTGGGACAGCAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PSSFLSSMHCIFVTS*TPWFVRMMFGTARR Trigger: TCTCCTTGCTGTCCCAAACATCATCCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGATACAGTGCATGGAGCTCAAAAACGAGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CCA 72 bp | TCCATGCACTGTATCTTCGTGACCTCCTTGACACCCTaGTTTGTCAGGATGATGTTTGGGACAGCAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SMHCIFVTSLTP*FVRMMFGTARR Trigger: TCTCCTTGCTGTCCCAAACATCATCCTGACAAACCAGGGTGTCAAGGAGGTCACGAAGATACAGTGCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CAA 72 bp | AAGCAGACGACAAAAACGAGCACGATGCTGAAGATATaGCGGCTGGACTTCCTCTTGACGGAGGTGGAATTC | + |
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Preference number: 6 (lower is better) Translates to: KQTTKTSTMLKI*RLDFLLTEVEF Trigger: GAATTCCACCTCCGTCAAGAGGAAGTCCAGCCGCAATATCTTCAGCATCGTGCTCGTTTTTGTCGTCTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS TCA 72 bp | TTTTGGTTTTGGAAACCTCTAGGTCATTCTGGACTTTaGGTGACATGTGTAACTTCTTATTTAAGACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FWFWKPLGHSGL*VTCVTSYLRLL Trigger: GAGAAGTCTTAAATAAGAAGTTACACATGTCACTCAAAGTCCAGAATGACCTAGAGGTTTCCAAAACCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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| CDS CAA 72 bp | CTTTTGGTTTTGGAAACCTCTAGGTCATTCTGGACTTaGAGTGACATGTGTAACTTCTTATTTAAGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLVLETSRSFWT*SDMCNFLFKTS Trigger: AGAAGTCTTAAATAAGAAGTTACACATGTCACTCAAAGTCCAGAATGACCTAGAGGTTTCCAAAACCAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065220.13 ENSMUST00000091112.6 ENSMUST00000196081.5 ENSMUST00000197220.2 ENSMUST00000197841.2 |
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