Pregenerated sensors for P2RY13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036362Ensembl transcript IDs: ENSMUST00000040622.3
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTGGGCTGGAGGACTCGGAGGAGGTTGGGCAGGTAAGGTTACCTaGAGTAAGGGACAGCAACTTTGGGTGTCACTAATCAATAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: DWAGGLGGGWAGKVT*SKGQQLWVSLINRN Trigger: GTTCCTATTGATTAGTGACACCCAAAGTTGCTGTCCCTTACTCCAGGTAACCTTACCTGCCCAACCTCCTCCGAGTCCTCCAGCCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CCA 90 bp | CAGGAAGACAAGGAAGTTCTCTTGCCTCTGTGGCTTCTGAGGCTATaGAAAGAGAGAAGCCAGGATTTCACATTACAGGCGCGGTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: QEDKEVLLPLWLLRL*KERSQDFTLQARLG Trigger: CCCTAACCGCGCCTGTAATGTGAAATCCTGGCTTCTCTCTTTCCATAGCCTCAGAAGCCACAGAGGCAAGAGAACTTCCTTGTCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR TCA 90 bp | AGTGATTCCAGGAAGACAAGGAAGTTCTCTTGCCTCTGTGGCTTCTaGGGCTATGGAAAGAGAGAAGCCAGGATTTCACATTACAGGCGC | + |
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Preference number: 1 (lower is better) Translates to: SDSRKTRKFSCLCGF*GYGKREARISHYRR Trigger: GCGCCTGTAATGTGAAATCCTGGCTTCTCTCTTTCCATAGCCTCAGAAGCCACAGAGGCAAGAGAACTTCCTTGTCTTCCTGGAATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACGATTGCACATGGCTGTaGACTGGCTTTGCCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AVRGRVVVFSRKPSITSHDCTWL*TGFACC Trigger: GCAACAGGCAAAGCCAGTTCACAGCCATGTGCAATC...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACAAGGAGGAAATCTTTTaGGATGCCTGGGGTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: AVRGRVVVFSRKPSITSHKEEIF*DAWGYF Trigger: AAAATAACCCCAGGCATCTCAAAAGATTTCCTCCTT...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR GCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACCATCTAGTGGCCATTTaGTGTATTACATGGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: AVRGRVVVFSRKPSITSHHLVAI*CITWSL Trigger: AAGAGACCATGTAATACAGCAAATGGCCACTAGATG...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CAA 90 bp | CTAAACACTTCCCCTCTCTGGATTGCACATGGCTGTGAACTGGCTTaGCCTGTTGCATGTGCCTCTCTTCTGGTGCTCTGTTTAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: LNTSPLWIAHGCELA*PVACASLLVLCLDV Trigger: TACATCTAAACAGAGCACCAGAAGAGAGGCACATGCAACAGGCAAAGCCAGTTCACAGCCATGTGCAATCCAGAGAGGGGAAGTGTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACAAAAATCTTCCCACATaGATATTACTAATGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: AVRGRVVVFSRKPSITSHKNLPT*ILLMPG Trigger: GCCTGGCATTAGTAATATTCATGTGGGAAGATTTTT...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGGTGGTAACTAGAATGCCCTTGAAAAGGTaGCATCTAGTGGCCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: QPGVLGIMCVRDGGVVTRMPLKR*HLVAIC Trigger: GCAAATGGCCACTAGATGTCACCTTTTCAAGGGCAT...TCTAGTTACCACCCCACCATCTCTCACACACATAATTCCTAAAACACCAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCTGTAAAAGCCAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTATAGACGTGAGGCCATaGGTGAAATTAACCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGCKSQPGVLGIMCVRDGIDVRP*VKLTCG Trigger: CCCACAGGTTAATTTCACGCATGGCCTCACGTCTAT...ACCATCTCTCACACACATAATTCCTAAAACACCAGGCTGGCTTTTACAGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CAA 90 bp | AAATCTTCCCACATGAATATTACTAATGCCAGGCCAACCATCCCCTaGCTCACATGCACTAAGGATAGTGTACAACAAACATCCCGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KSSHMNITNARPTIP*LTCTKDSVQQTSRL Trigger: TAGACGGGATGTTTGTTGTACACTATCCTTAGTGCATGTGAGCAAGGGGATGGTTGGCCTGGCATTAGTAATATTCATGTGGGAAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR-3UTR CAA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACAGGATGCAGATGCTGTaGCCCAGGAAGGTTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AVRGRVVVFSRKPSITSHRMQML*PRKVLL Trigger: CAGCAAAACCTTCCTGGGCAACAGCATCTGCATCCT...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CCA 72 bp | ACACTTCCCCTCTCTGGATTGCACATGGCTGTGAACTaGCTTTGCCTGTTGCATGTGCCTCTCTTCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: TLPLSGLHMAVN*LCLLHVPLFWC Trigger: GCACCAGAAGAGAGGCACATGCAACAGGCAAAGCCAGTTCACAGCCATGTGCAATCCAGAGAGGGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CCA 72 bp | GGAGGACTCGGAGGAGGTTGGGCAGGTAAGGTTACCTaGAGTAAGGGACAGCAACTTTGGGTGTCACTAATC | + |
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Preference number: 3 (lower is better) Translates to: GGLGGGWAGKVT*SKGQQLWVSLI Trigger: GATTAGTGACACCCAAAGTTGCTGTCCCTTACTCCAGGTAACCTTACCTGCCCAACCTCCTCCGAGTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR TCA 72 bp | ACAGGATGCAGATGCTGTTGCCCAGGAAGGTTTTGCTaGCTAAACACTTCCCCTCTCTGGATTGCACATGGC | + |
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Preference number: 3 (lower is better) Translates to: TGCRCCCPGRFC*LNTSPLWIAHG Trigger: GCCATGTGCAATCCAGAGAGGGGAAGTGTTTAGTCAGCAAAACCTTCCTGGGCAACAGCATCTGCATCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR GCA 72 bp | GCCCCCACCTTAGCCTTTCCACACAGGCACTGGATATaGAAGTTGGTTGGTTTCTGTTCACAAGTGTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: APTLAFPHRHWI*KLVGFCSQVSA Trigger: TGCTGACACTTGTGAACAGAAACCAACCAACTTGCATATCCAGTGCCTGTGTGGAAAGGCTAAGGTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR TCA 72 bp | ACTAAACACTTCCCCTCTCTGGATTGCACATGGCTGTaGACTGGCTTTGCCTGTTGCATGTGCCTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TKHFPSLDCTWL*TGFACCMCLSS Trigger: AGAAGAGAGGCACATGCAACAGGCAAAGCCAGTTCACAGCCATGTGCAATCCAGAGAGGGGAAGTGTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR TCA 72 bp | AGGAAGACAAGGAAGTTCTCTTGCCTCTGTGGCTTCTaGGGCTATGGAAAGAGAGAAGCCAGGATTTCACAT | + |
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Preference number: 3 (lower is better) Translates to: RKTRKFSCLCGF*GYGKREARISH Trigger: ATGTGAAATCCTGGCTTCTCTCTTTCCATAGCCTCAGAAGCCACAGAGGCAAGAGAACTTCCTTGTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CCA 72 bp | TTGCTGTCTTTTTACGAACCCTGTTTTTGGGAAATGTaGCTAAGAATGAAAGCAGTTAATATAAGACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LLSFYEPCFWEM*LRMKAVNIRQC Trigger: ACACTGTCTTATATTAACTGCTTTCATTCTTAGCCACATTTCCCAAAAACAGGGTTCGTAAAAAGACAGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACCGGTGTTCAGCAGGATaGCTGCCAGGAAGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: AVRGRVVVFSRKPSITSHRCSAG*LPGRPQ Trigger: CTGTGGTCTTCCTGGCAGGCATCCTGCTGAACACCG...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACGTTCAGCAGGATGCCTaGCAGGAAGACCACAGTATA | + |
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Preference number: 4 (lower is better) Translates to: AVRGRVVVFSRKPSITSHVQQDA*QEDHSI Trigger: TATACTGTGGTCTTCCTGGCAGGCATCCTGCTGAAC...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| 3UTR CAA 72 bp | TCCCCTCTCTGGATTGCACATGGCTGTGAACTGGCTTaGCCTGTTGCATGTGCCTCTCTTCTGGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLWIAHGCELA*PVACASLLVLC Trigger: ACAGAGCACCAGAAGAGAGGCACATGCAACAGGCAAAGCCAGTTCACAGCCATGTGCAATCCAGAGAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACTCTGACAAAATGCAGTaGGGCAAAGCAGACAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AVRGRVVVFSRKPSITSHSDKMQ*GKADKE Trigger: TTCTTTGTCTGCTTTGCCCCACTGCATTTTGTCAGA...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | GAAGGCTGTAAAAGCCAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTTCATCCGAGTGTCCCTaGGGCACCGCTCAGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: EGCKSQPGVLGIMCVRDGSSECP*GTAQTC Trigger: ACAAGTCTGAGCGGTGCCCCAGGGACACTCGGATGA...ACCATCTCTCACACACATAATTCCTAAAACACCAGGCTGGCTTTTACAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACGTTCAAGATCATGTTTaGCAGGGAGATGAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: AVRGRVVVFSRKPSITSHVQDHV*QGDEEH Trigger: ATGTTCTTCATCTCCCTGCCAAACATGATCTTGAAC...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GCGGTTAGGGGAAGAGTCGTCGTGTTCTCCAGAAAACCCAGCATCACCAGCCACTGCCAGAAAGAGAGTTaGTTCTTTAGCAATAAACAG | + |
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Preference number: 4 (lower is better) Translates to: AVRGRVVVFSRKPSITSHCQKES*FFSNKQ Trigger: CTGTTTATTGCTAAAGAAGCAACTCTCTTTCTGGCA...GTGGCTGGTGATGCTGGGTTTTCTGGAGAACACGACGACTCTTCCCCTAACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR TCA 90 bp | GAAGGCTGTAAAAGCCAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTCCAGGGCGCAAGGTGTaGGTCGGAAAGGATTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGCKSQPGVLGIMCVRDGPGRKV*VGKDFE Trigger: TTCAAAATCCTTTCCGACTCACACCTTGCGCCCTGG...ACCATCTCTCACACACATAATTCCTAAAACACCAGGCTGGCTTTTACAGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGGTGGTAACTAGATCCCCATCTCACACATaGCACCTTTTGTGTGAACTT | + |
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Preference number: 4 (lower is better) Translates to: QPGVLGIMCVRDGGVVTRSPSHT*HLLCEL Trigger: AAGTTCACACAAAAGGTGCCATGTGTGAGATGGGGA...TCTAGTTACCACCCCACCATCTCTCACACACATAATTCCTAAAACACCAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTGAAAGGCAGCATGAGTaGCATTATCAAGTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GVVTRRKIFQANLFPINLERQHE*HYQVCH Trigger: GTGGCAGACTTGATAATGGCACTCATGCTGCCTTTC...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTTGCCATTATCAAGTCTaGCACCAGAGTGTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GVVTRRKIFQANLFPINLCHYQV*HQSVLE Trigger: CTCAAGAACACTCTGGTGGCAGACTTGATAATGGCA...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR GCA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTAATGGAGACTGTTTTTaGGAAAGCCGTCTTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: GVVTRRKIFQANLFPINLNGDCF*ESRLFD Trigger: GTCAAAAAGACGGCTTTCGCAAAAACAGTCTCCATT...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGGTGGTAACTAGATTGACTGTAAGTGTATaGTATTCTGACAAAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPGVLGIMCVRDGGVVTRLTVSV*YSDKMQ Trigger: CTGCATTTTGTCAGAATACCATACACTTACAGTCAA...TCTAGTTACCACCCCACCATCTCTCACACACATAATTCCTAAAACACCAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGGTGGTAACTAGATTAGCAATAAACAGCTaGTTTTCTAACCTACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QPGVLGIMCVRDGGVVTRLAINS*FSNLQS Trigger: TGACTGTAGGTTAGAAAACCAGCTGTTTATTGCTAA...TCTAGTTACCACCCCACCATCTCTCACACACATAATTCCTAAAACACCAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTAGTCAGTCTTATTGGTaGTTTGACTGTAAGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: GVVTRRKIFQANLFPINLSQSYW*FDCKCM Trigger: CATACACTTACAGTCAAACCACCAATAAGACTGACT...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CCA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTTACAGTCAGTCTTATTaGTGGTTTGACTGTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GVVTRRKIFQANLFPINLYSQSY*WFDCKC Trigger: ACACTTACAGTCAAACCACCAATAAGACTGACTGTA...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS GCA 90 bp | TGGGGATGTGGACGAACACCCAGAGGGCCACGGTGTTCAGCAGGATaGCTGCCAGGAAGACCACAGTATAGAGAACCGGGAACAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: WGCGRTPRGPRCSAG*LPGRPQYREPGTAA Trigger: AGCTGCTGTTCCCGGTTCTCTATACTGTGGTCTTCCTGGCAGGCATCCTGCTGAACACCGTGGCCCTCTGGGTGTTCGTCCACATCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS TCA 90 bp | CCACAGCCCAAGGGGACTCTTCAAAGATGCACACTTCTTCACGGATaGTGGCGTTGCCTCCTTGTTCAAGATCATGTTTGGCAGGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: PQPKGTLQRCTLLHG*WRCLLVQDHVWQGD Trigger: ATCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAACGCCATCATCCGTGAAGAAGTGTGCATCTTTGAAGAGTCCCCTTGGGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CAA 90 bp | GAAGGCTGTAAAAGCCAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGCACCGCTCAGACTaGTTGAAGCCCTGCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: EGCKSQPGVLGIMCVRDGGHRSD*LKPCIP Trigger: TGGGATGCAGGGCTTCAACAAGTCTGAGCGGTGCCC...ACCATCTCTCACACACATAATTCCTAAAACACCAGGCTGGCTTTTACAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTCACCGCTCAGACTTGTaGAAGCCCTGCATCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GVVTRRKIFQANLFPINLHRSDL*KPCIPV Trigger: CACTGGGATGCAGGGCTTCAACAAGTCTGAGCGGTG...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS TCA 90 bp | ATGATGGCGTTGCCTCCTTGTTCAAGATCATGTTTGGCAGGGAGATaGAGAACATCAGGGACCAGACGGAAATGGAGACTGTTTTTGCGA | + |
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Preference number: 5 (lower is better) Translates to: MMALPPCSRSCLAGR*RTSGTRRKWRLFLR Trigger: TCGCAAAAACAGTCTCCATTTCCGTCTGGTCCCTGATGTTCTTCATCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAACGCCATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTGGGGTGGTAACTAGAGAGTCGGAAAGGATTTaGAAAGGCAGCATGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: QPGVLGIMCVRDGGVVTRESERI*KGSMSA Trigger: GGCACTCATGCTGCCTTTCAAAATCCTTTCCGACTC...TCTAGTTACCACCCCACCATCTCTCACACACATAATTCCTAAAACACCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CAA 90 bp | GAAGGCTGTAAAAGCCAGCCTGGTGTTTTAGGAATTATGTGTGTGAGAGATGGTACGATAAAGGTGGAATaGCTGGGGATGTGGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: EGCKSQPGVLGIMCVRDGTIKVE*LGMWTN Trigger: GTTCGTCCACATCCCCAGCAATTCCACCTTTATCGT...ACCATCTCTCACACACATAATTCCTAAAACACCAGGCTGGCTTTTACAGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGGTAACTAGAAGGAAGATTTTTCAGGCAAACCTGTTTCCCATTAACCTTGATGGCGTTGCCTCCTaGTTCAAGATCATGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GVVTRRKIFQANLFPINLDGVAS*FKIMFG Trigger: GCCAAACATGATCTTGAACAAGGAGGCAACGCCATC...AAGGTTAATGGGAAACAGGTTTGCCTGAAAAATCTTCCTTCTAGTTACCACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS CCA 90 bp | ATTGGTGGTTTGACTGTAAGTGTATGGTATTCTGACAAAATGCAGTaGGGCAAAGCAGACAAAGAAGACAGCCATGACGATAAATACCTT | + |
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Preference number: 5 (lower is better) Translates to: IGGLTVSVWYSDKMQ*GKADKEDSHDDKYL Trigger: AAGGTATTTATCGTCATGGCTGTCTTCTTTGTCTGCTTTGCCCCACTGCATTTTGTCAGAATACCATACACTTACAGTCAAACCACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS GCA 72 bp | ACCACGGAGGAGAGCGTGCACACAAATCCTCGGAGCTaGCAGGGCGCAAGGTGTGAGTCGGAAAGGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: TTEESVHTNPRS*QGARCESERIL Trigger: CAAAATCCTTTCCGACTCACACCTTGCGCCCTGGCAGCTCCGAGGATTTGTGTGCACGCTCTCCTCCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS GCA 72 bp | CATACATCGTCTCATAGAAGACCACGGAGGAGAGCGTaGACACAAATCCTCGGAGCTGCCAGGGCGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: HTSSHRRPRRRA*TQILGAARAQG Trigger: ACCTTGCGCCCTGGCAGCTCCGAGGATTTGTGTGCACGCTCTCCTCCGTGGTCTTCTATGAGACGATGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS TCA 72 bp | TTGCCTCCTTGTTCAAGATCATGTTTGGCAGGGAGATaGAGAACATCAGGGACCAGACGGAAATGGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LPPCSRSCLAGR*RTSGTRRKWRL Trigger: CAGTCTCCATTTCCGTCTGGTCCCTGATGTTCTTCATCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS CAA 72 bp | GATGCACACTTCTTCACGGATGATGGCGTTGCCTCCTaGTTCAAGATCATGTTTGGCAGGGAGATGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: DAHFFTDDGVAS*FKIMFGREMKN Trigger: GTTCTTCATCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAACGCCATCATCCGTGAAGAAGTGTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS CAA 90 bp | CTCTTCAAAGATGCACACTTCTTCACGGATGATGGCGTTGCCTCCTaGTTCAAGATCATGTTTGGCAGGGAGATGAAGAACATCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LFKDAHFFTDDGVAS*FKIMFGREMKNIRD Trigger: GTCCCTGATGTTCTTCATCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAACGCCATCATCCGTGAAGAAGTGTGCATCTTTGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS TCA 72 bp | AAGGGGACTCTTCAAAGATGCACACTTCTTCACGGATaGTGGCGTTGCCTCCTTGTTCAAGATCATGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KGTLQRCTLLHG*WRCLLVQDHVW Trigger: CCAAACATGATCTTGAACAAGGAGGCAACGCCATCATCCGTGAAGAAGTGTGCATCTTTGAAGAGTCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS CAA 72 bp | TCTTCAAAGATGCACACTTCTTCACGGATGATGGCGTaGCCTCCTTGTTCAAGATCATGTTTGGCAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SSKMHTSSRMMA*PPCSRSCLAGR Trigger: TCTCCCTGCCAAACATGATCTTGAACAAGGAGGCAACGCCATCATCCGTGAAGAAGTGTGCATCTTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS GCA 72 bp | GATTTTGAAAGGCAGCATGAGTGCCATTATCAAGTCTaGCACCAGAGTGTTCTTGAGGTAGACGATAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: DFERQHECHYQV*HQSVLEVDDKG Trigger: ACCTTTATCGTCTACCTCAAGAACACTCTGGTGGCAGACTTGATAATGGCACTCATGCTGCCTTTCAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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| CDS CCA 72 bp | TTGACTGTAAGTGTATGGTATTCTGACAAAATGCAGTaGGGCAAAGCAGACAAAGAAGACAGCCATGACGAT | + |
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Preference number: 6 (lower is better) Translates to: LTVSVWYSDKMQ*GKADKEDSHDD Trigger: ATCGTCATGGCTGTCTTCTTTGTCTGCTTTGCCCCACTGCATTTTGTCAGAATACCATACACTTACAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040622.3 |
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