Pregenerated sensors for P2RY12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036353Ensembl transcript IDs: ENSMUST00000050360.14, ENSMUST00000170388.6, ENSMUST00000196583.5, ENSMUST00000199609.2, ENSMUST00000199675.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTTTTTGTGGTTTGCCTaGAGTATAGCAATGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRFLWFA*SIAMGC Trigger: GCATCCCATTGCTATACTGCAGGCAAACCACAAAAA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGAATATATTTGTATGGTaGTTTCCTTGGAGCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRNIFVW*FPWSSL Trigger: CAGACTGCTCCAAGGAAATCACCATACAAATATATT...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTTTTTGTGGTTTGCCTaGAGTATAGCAATGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAFLWFA*SIAMGC Trigger: GCATCCCATTGCTATACTGCAGGCAAACCACAAAAA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTCTACCATCTTAATGTaGATTTACAATAATCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRSTILM*IYNNPG Trigger: GCCTGGATTATTGTAAATGCACATTAAGATGGTAGA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTAATATATTTGTATGGTaGTTTCCTTGGAGCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VFLLRSVLFIQAAGIFKANIFVW*FPWSSL Trigger: CAGACTGCTCCAAGGAAATCACCATACAAATATATT...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTCTACCATCTTAATGTaGATTTACAATAATCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VFLLRSVLFIQAAGIFKASTILM*IYNNPG Trigger: GCCTGGATTATTGTAAATGCACATTAAGATGGTAGA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR CCA 72 bp | TTAATATATTTGTATGGTGATTTCCTTGGAGCAGTCTaGATATTAAAGACTGAAGCAGCCCCTTGGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LIYLYGDFLGAV*ILKTEAAPWVM Trigger: CATTACCCAAGGGGCTGCTTCAGTCTTTAATATCCAGACTGCTCCAAGGAAATCACCATACAAATATATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGCCATTGTCATTTCATTaGATTTACGTCCCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRPLSFH*IYVPLV Trigger: AACCAAAGGGACGTAAATCAAATGAAATGACAATGG...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTCCAGGCCTTATCCATaGTCATTTCATTTGATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRSRPYP*SFHLIY Trigger: GTAAATCAAATGAAATGACAATGGATAAGGCCTGGA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTAGAACCTTAGTAAAATaGCTGCCTCTAGTGTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VFLLRSVLFIQAAGIFKARTLVK*LPLVLR Trigger: CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCT...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTCCATTGTCATTTCATTaGATTTACGTCCCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAPLSFH*IYVPLV Trigger: AACCAAAGGGACGTAAATCAAATGAAATGACAATGG...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTCCAGGCCTTATCCATaGTCATTTCATTTGATTTAC | + |
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Preference number: 3 (lower is better) Translates to: VFLLRSVLFIQAAGIFKASRPYP*SFHLIY Trigger: GTAAATCAAATGAAATGACAATGGATAAGGCCTGGA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTCCCAGGGGAGAAGGTaGTATTGGCTGAGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRSQGRR*YWLRWC Trigger: ACACCACCTCAGCCAATACCACCTTCTCCCCTGGGA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTCCCAGGGGAGAAGGTaGTATTGGCTGAGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKASQGRR*YWLRWC Trigger: ACACCACCTCAGCCAATACCACCTTCTCCCCTGGGA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR TCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGCTTGGGAACTTTGGCTaGACCCCTTGTTCTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRLGNFG*TPCSDI Trigger: TATGTCAGAACAAGGGGTTCAGCCAAAGTTCCCAAG...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR GCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGGGTGTAGGGAATCCGTaGAAAGTGGAAGGGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRGVGNP*KVEGNK Trigger: TTTGTTCCCTTCCACTTTGCACGGATTCCCTACACC...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGCGTTTACCTTTTTCTTaGGAACTTTGGCTGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRRLPFS*ELWLNP Trigger: GGGGTTCAGCCAAAGTTCCCAAGAAAAAGGTAAACG...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR TCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGGATTTACTGCGGATCTaGAAGAAAATCCTCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRDLLRI*KKILIA Trigger: GGCAATGAGGATTTTCTTTCAGATCCGCAGTAAATC...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR GCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGAACAGAAAGAATCTTTaGACCCAAGAGATTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRNRKNL*TQEIAG Trigger: CCCAGCAATCTCTTGGGTGCAAAGATTCTTTCTGTT...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR GCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTGGTGTAGGGAATCCGTaGAAAGTGGAAGGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAGVGNP*KVEGNK Trigger: TTTGTTCCCTTCCACTTTGCACGGATTCCCTACACC...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGGGAATCCGTGCAAAGTaGAAGGGAACAAAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRGIRAK*KGTKQI Trigger: TATTTGCTTTGTTCCCTTCCACTTTGCACGGATTCC...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR TCA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGCTTGGCAGATGTAATTaGCTATTTCGTGCCAAACTA | + |
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Preference number: 4 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRLGRCN*LFRAKL Trigger: TAGTTTGGCACGAAATAGTCAATTACATCTGCCAAG...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTCGTTTACCTTTTTCTTaGGAACTTTGGCTGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKARLPFS*ELWLNP Trigger: GGGGTTCAGCCAAAGTTCCCAAGAAAAAGGTAAACG...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR TCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTGATTTACTGCGGATCTaGAAGAAAATCCTCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKADLLRI*KKILIA Trigger: GGCAATGAGGATTTTCTTTCAGATCCGCAGTAAATC...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR GCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTAACAGAAAGAATCTTTaGACCCAAGAGATTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKANRKNL*TQEIAG Trigger: CCCAGCAATCTCTTGGGTGCAAAGATTCTTTCTGTT...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR TCA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTCTTGGCAGATGTAATTaGCTATTTCGTGCCAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLRSVLFIQAAGIFKALGRCN*LFRAKL Trigger: TAGTTTGGCACGAAATAGTCAATTACATCTGCCAAG...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS GCA 90 bp | GCCATAGGGTGCTCTCCTTCACGTAGAACAGGGTGTTCTCAGCACTaGAGTCAAAGACGGCCCGAGTTTGGCTCAGGGTGTAGGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: AIGCSPSRRTGCSQH*SQRRPEFGSGCRES Trigger: GGATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTTGACTGCAGTGCTGAGAACACCCTGTTCTACGTGAAGGAGAGCACCCTATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS CCA 90 bp | GCTGTTCGTGATGAGCCCAGCAAAGAACAGGACGGTGTACAGCAATaGGAAGAGAACCTGGGTGATCTTGTAGTCTCTGACGCACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: AVRDEPSKEQDGVQQ*EENLGDLVVSDAQG Trigger: ACCCTGTGCGTCAGAGACTACAAGATCACCCAGGTTCTCTTCCCATTGCTGTACACCGTCCTGTTCTTTGCTGGGCTCATCACGAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 ENSMUST00000199675.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGGGGGAGAAGGTGGTATaGGCTGAGGTGGTGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRGEKVV*AEVVLT Trigger: TGTCAACACCACCTCAGCCAATACCACCTTCTCCCC...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGAAAGACGGCCCGAGTTaGGCTCAGGGTGTAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRKDGPS*AQGVGN Trigger: ATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTT...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS GCA 90 bp | AATGATGAAGTTGGATTTACTGCGGATCTGAAAGAAAATCCTCATTaGCAAGCTGTTCGTGATGAGCCCAGCAAAGAACAGGACGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: NDEVGFTADLKENPH*QAVRDEPSKEQDGV Trigger: TACACCGTCCTGTTCTTTGCTGGGCTCATCACGAACAGCTTGGCAATGAGGATTTTCTTTCAGATCCGCAGTAAATCCAACTTCATCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 ENSMUST00000199675.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTGGGGAGAAGGTGGTATaGGCTGAGGTGGTGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAGEKVV*AEVVLT Trigger: TGTCAACACCACCTCAGCCAATACCACCTTCTCCCC...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTAAAGACGGCCCGAGTTaGGCTCAGGGTGTAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAKDGPS*AQGVGN Trigger: ATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTT...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTCTTTTGGCCTCCTGTaGGTGAGAATCATGTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRSFGLL*VRIMLG Trigger: GCCTAACATGATTCTCACCAACAGGAGGCCAAAAGA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGACGTTTACCTTTTTCTaGGGAACTTTGGCTGAACCC | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRTFTFF*GTLAEP Trigger: GGGTTCAGCCAAAGTTCCCAAGAAAAAGGTAAACGT...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTGGTTCGCCACCTTCTaGTCCTTTCTTCTTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRWFATF*SFLLVC Trigger: ACAAACAAGAAGAAAGGACAAGAAGGTGGCGAACCA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTCTTTTGGCCTCCTGTaGGTGAGAATCATGTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLRSVLFIQAAGIFKASFGLL*VRIMLG Trigger: GCCTAACATGATTCTCACCAACAGGAGGCCAAAAGA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | ACTCTACCCAGTAAACTTAGAACCTTAGTAAAATTGCTGCCTCTAGTGTTAAGGTCTTGTCCTTTCTTCTaGTTTGTCCCAGATGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: TLPSKLRTLVKLLPLVLRSCPFF*FVPDVD Trigger: ATCAACATCTGGGACAAACAAGAAGAAAGGACAAGA...CCTTAACACTAGAGGCAGCAATTTTACTAAGGTTCTAAGTTTACTGGGTAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTGGTTCGCCACCTTCTaGTCCTTTCTTCTTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VFLLRSVLFIQAAGIFKAWFATF*SFLLVC Trigger: ACAAACAAGAAGAAAGGACAAGAAGGTGGCGAACCA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTTATTAAGAAGTGTTCTGTTCATTCAAGCAGCAGGCATTTTCAAAGCTTCTTGTCCTTTCTTCTaGTTTGTCCCAGATGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: VFLLRSVLFIQAAGIFKASCPFF*FVPDVD Trigger: ATCAACATCTGGGACAAACAAGAAGAAAGGACAAGA...AGCTTTGAAAATGCCTGCTGCTTGAATGAACAGAACACTTCTTAATAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS CAA 72 bp | GGTGTTCTCAGCACTGCAGTCAAAGACGGCCCGAGTTaGGCTCAGGGTGTAGGGAATCCGTGCAAAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GVLSTAVKDGPS*AQGVGNPCKVE Trigger: TTCCACTTTGCACGGATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTTGACTGCAGTGCTGAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS CAA 90 bp | GTAGAACAGGGTGTTCTCAGCACTGCAGTCAAAGACGGCCCGAGTTaGGCTCAGGGTGTAGGGAATCCGTGCAAAGTGGAAGGGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: VEQGVLSTAVKDGPS*AQGVGNPCKVEGNK Trigger: TTTGTTCCCTTCCACTTTGCACGGATTCCCTACACCCTGAGCCAAACTCGGGCCGTCTTTGACTGCAGTGCTGAGAACACCCTGTTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS CCA 72 bp | TGCACCCAAGAGATTGCTGGGGCTGGACGTTTTAAATaGCCTGGTGGTCTTCAGGTAGCGGTCAATGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: CTQEIAGAGRFK*PGGLQVAVNGY Trigger: ATAACCATTGACCGCTACCTGAAGACCACCAGGCCATTTAAAACGTCCAGCCCCAGCAATCTCTTGGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS CAA 72 bp | CAGATGACAACAGAAAGAATCTTTGCACCCAAGAGATaGCTGGGGCTGGACGTTTTAAATGGCCTGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QMTTERIFAPKR*LGLDVLNGLVV Trigger: GACCACCAGGCCATTTAAAACGTCCAGCCCCAGCAATCTCTTGGGTGCAAAGATTCTTTCTGTTGTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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| CDS GCA 72 bp | GTTGGATTTACTGCGGATCTGAAAGAAAATCCTCATTaGCAAGCTGTTCGTGATGAGCCCAGCAAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: VGFTADLKENPH*QAVRDEPSKEQ Trigger: CTGTTCTTTGCTGGGCTCATCACGAACAGCTTGGCAATGAGGATTTTCTTTCAGATCCGCAGTAAATCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 ENSMUST00000199675.2 |
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| CDS CAA 90 bp | TTTAAGAAAGAACATTTTGTTACGTCCTTATCTTTTGGCCTCCTGTaGGTGAGAATCATGTTAGGCAGTGAAATTAAGAACATGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: FKKEHFVTSLSFGLL*VRIMLGSEIKNMKA Trigger: GGCCTTCATGTTCTTAATTTCACTGCCTAACATGATTCTCACCAACAGGAGGCCAAAAGATAAGGACGTAACAAAATGTTCTTTCTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050360.14 ENSMUST00000170388.6 ENSMUST00000196583.5 ENSMUST00000199609.2 |
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