Pregenerated sensors for P2RX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022758Ensembl transcript IDs: ENSMUST00000023441.11, ENSMUST00000171002.10, ENSMUST00000231806.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGGCCCTGCACGCAGGCGTTGTAAACTAGTGGGGCAGGCGCAGTaGGCACGGTGGCAGCGACGGCGACAGCAGGTGGGTCATAGCGGG | + |
|
Preference number: 1 (lower is better) Translates to: AGPARRRCKLVGQAQ*ARWQRRRQQVGHSG Trigger: CCCGCTATGACCCACCTGCTGTCGCCGTCGCTGCCACCGTGCGCACTGCGCCTGCCCCACTAGTTTACAACGCCTGCGTGCAGGGCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 90 bp | GTGGCAGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATaGCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCAC | + |
|
Preference number: 1 (lower is better) Translates to: VAAIQTGHRCGAVRG*LDPSSSRHGAGANH Trigger: GTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR GCA 90 bp | AATAGGCCAGTGGGTGGCAGCCATCCAGACAGGCCATCGGTGCGGTaGGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACATGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: NRPVGGSHPDRPSVR*GAWMPGSQQQQTWG Trigger: GCCCCATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCACCCACTGGCCTATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | GTGGGTGGCAGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTaGATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: VGGSHPDRPSVRCGA*MPGSQQQQTWGRCK Trigger: TTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCACCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR TCA 90 bp | ACGTGGTGCGGTGCGGGGACCCTGTACAGAACCCAACCAGTGATGTaGGTCGTGAGGCTCGGGTTTATCTGGCGCCTGGCAGCGAGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: TWCGAGTLYRTQPVM*VVRLGFIWRLAARG Trigger: GCCCCTCGCTGCCAGGCGCCAGATAAACCCGAGCCTCACGACTCACATCACTGGTTGGGTTCTGTACAGGGTCCCCGCACCGCACCACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | CAGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTaGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCT | + |
|
Preference number: 1 (lower is better) Translates to: QPSRQAIGAVRCVDA*IPAAADMGQVQTTP Trigger: AGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR TCA 90 bp | AATCGGGAATCGGGGCCCTTGCAGCTCTGGCCTCCTGGCTTCAGGTaGGCTGTTCCTCCAACCTGGTTCGCAGGTCCGCTGCAGGTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: NRESGPLQLWPPGFR*AVPPTWFAGPLQVC Trigger: GCAGACCTGCAGCGGACCTGCGAACCAGGTTGGAGGAACAGCTCACCTGAAGCCAGGAGGCCAGAGCTGCAAGGGCCCCGATTCCCGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | GAGGAGGCGAGGACTGGGGTGGGCTGTTTGCTCCAGCTTTCTGCGTaGTGTGGGTACACATGGCTCCAACTCTCCAGAGGTGAGGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: EEARTGVGCLLQLSA*CGYTWLQLSRGEEG Trigger: CCCTTCCTCACCTCTGGAGAGTTGGAGCCATGTGTACCCACACCACGCAGAAAGCTGGAGCAAACAGCCCACCCCAGTCCTCGCCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 90 bp | CAGGAGCCGCGCCTTCCCATCATAGCCCTTTGCAGGCCACAGTCCTaGGAGCTGAGTGGCACCAGGAACTCCAAGGGTTTTTGGAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: QEPRLPIIALCRPQS*ELSGTRNSKGFWRL Trigger: CAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGCCTGCAAAGGGCTATGATGGGAAGGCGCGGCTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 90 bp | CGCTGCAGGTCTGCTTCTCTCTGCCAGTTCCACTGCCCTGAAAGCTaGCAGGAAGGACTTCCATGCGTTCTATCCCTCTGCCCACAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: RCRSASLCQFHCPES*QEGLPCVLSLCPQS Trigger: GGACTGTGGGCAGAGGGATAGAACGCATGGAAGTCCTTCCTGTCAGCTTTCAGGGCAGTGGAACTGGCAGAGAGAAGCAGACCTGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | CCTTCCCATCATAGCCCTTTGCAGGCCACAGTCCTGAGAGCTGAGTaGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: PSHHSPLQATVLRAE*HQELQGFLEAVEAW Trigger: CCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGCCTGCAAAGGGCTATGATGGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 90 bp | GCTTTCTGCGTGGTGTGGGTACACATGGCTCCAACTCTCCAGAGGTaGGGAAGGGTTCTTGAAACTATGGCGCTCTGGCTGGAGCCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: AFCVVWVHMAPTLQR*GRVLETMALWLEPE Trigger: CTCTGGCTCCAGCCAGAGCGCCATAGTTTCAAGAACCCTTCCTCACCTCTGGAGAGTTGGAGCCATGTGTACCCACACCACGCAGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | GAGTGGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTaGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: EWHQELQGFLEAVEA*RSQLLLLFSPQPWF Trigger: GAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 90 bp | GTGGGTACACATGGCTCCAACTCTCCAGAGGTGAGGAAGGGTTCTTaGAACTATGGCGCTCTGGCTGGAGCCAGAGTTAAGGTTCTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: VGTHGSNSPEVRKGS*NYGALAGARVKVLA Trigger: TGCCAGAACCTTAACTCTGGCTCCAGCCAGAGCGCCATAGTTTCAAGAACCCTTCCTCACCTCTGGAGAGTTGGAGCCATGTGTACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | GAAGCCTGGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTaGTTCTCTCTCGGTGACCACACATGCACAACAAAACTGCCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: EAWRSQLLLLFSPQP*FSLGDHTCTTKLPL Trigger: CAGAGGCAGTTTTGTTGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCAGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 90 bp | GCTCTAGTCTCGATGTTGGAAGTTTACTCGCTTAGAGGGTTATTCTaGTACGTGACGTGGTGCGGTGCGGGGACCCTGTACAGAACCCAA | + |
|
Preference number: 1 (lower is better) Translates to: ALVSMLEVYSLRGLF*YVTWCGAGTLYRTQ Trigger: TTGGGTTCTGTACAGGGTCCCCGCACCGCACCACGTCACGTATCAGAATAACCCTCTAAGCGAGTAAACTTCCAACATCGAGACTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 90 bp | GCCTACCTCGGTTTTGCCCGACTTGGCTTTGCTGGGCTATTGTCTTaGTGTCAACAAGTCAGCACCTCACCACATATGTATTGCCACACA | + |
|
Preference number: 1 (lower is better) Translates to: AYLGFARLGFAGLLS*CQQVSTSPHMYCHT Trigger: TGTGTGGCAATACATATGTGGTGAGGTGCTGACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 90 bp | AAGAGAGAGAGAAAAGATTCCTCAGAGCTAAGCATAAGCGGACTCTaGAGATTTTATGCCGTAGCTGACCCAGGCACCCTGATGGCGGGA | + |
|
Preference number: 1 (lower is better) Translates to: KRERKDSSELSISGL*RFYAVADPGTLMAG Trigger: TCCCGCCATCAGGGTGCCTGGGTCAGCTACGGCATAAAATCTCCAGAGTCCGCTTATGCTTAGCTCTGAGGAATCTTTTCTCTCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 90 bp | CCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTaGCCACACATGCACAACAAAACTGCCTCTGTACTTCCTAAACTA | + |
|
Preference number: 1 (lower is better) Translates to: PAVAAVFTSALVLSR*PHMHNKTASVLPKL Trigger: TAGTTTAGGAAGTACAGAGGCAGTTTTGTTGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR GCA 90 bp | CTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGACCACACATaGACAACAAAACTGCCTCTGTACTTCCTAAACTATGCCCTACAC | + |
|
Preference number: 1 (lower is better) Translates to: LLFSPQPWFSLGDHT*TTKLPLYFLNYALH Trigger: GTGTAGGGCATAGTTTAGGAAGTACAGAGGCAGTTTTGTTGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CCA 90 bp | TATAAAGTTCTGGGAGAAACATGCCTACCTCGGTTTTGCCCGACTTaGCTTTGCTGGGCTATTGTCTTGCTGTCAACAAGTCAGCACCTC | + |
|
Preference number: 1 (lower is better) Translates to: YKVLGETCLPRFCPT*LCWAIVLLSTSQHL Trigger: GAGGTGCTGACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCATGTTTCTCCCAGAACTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 90 bp | GGTCAAATATATAAAGTTCTGGGAGAAACATGCCTACCTCGGTTTTaGCCGACTTGGCTTTGCTGGGCTATTGTCTTGCTGTCAACAAGT | + |
|
Preference number: 1 (lower is better) Translates to: GQIYKVLGETCLPRF*PTWLCWAIVLLSTS Trigger: ACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCATGTTTCTCCCAGAACTTTATATATTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCCAGACATGGGGCAGGTaGAAACCACTCCTAGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: AIQTGHRCGAVRGCLDPSQTWGR*KPLLGH Trigger: GTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTG...GCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGAGGTGCGGTGCGTGGATaGCTGGATCCCAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGGAVRG*LDPSSS Trigger: GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACC...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACGGTGCGTGGATGCCTaGATCCCAGCAGCAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGRCVDA*IPAAAD Trigger: GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCG...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGCAGGCCACAGTCCTGAGAGCTGAGTGGCACCAGGAACTCCAAGGGTTTCAGGGATGGAGGGCATaGACTGGATGGCAGAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLQATVLRAEWHQELQGFQGWRA*TGWQSP Trigger: GGGACTCTGCCATCCAGTTCATGCCCTCCATCCCTG...AAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGCCTGCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTCACATCCGGGAATCGGGAATCGGGGCCCTTGCAGCTCTGGCCTCCTGGCCCAACTCTCCAGAGGTaGGGAAGGGTTCTTGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: AFTSGNRESGPLQLWPPGPTLQR*GRVLET Trigger: AGTTTCAAGAACCCTTCCTCACCTCTGGAGAGTTGG...GCCAGGAGGCCAGAGCTGCAAGGGCCCCGATTCCCGATTCCCGGATGTGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACAGACATGGGGCAGGTaGAAACCACTCCTAGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGQTWGR*KPLLGH Trigger: GTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTG...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGAGTGGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTGGAATGGAGGGCATGAACTaGATGGCAGAGTCCCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ELSGTRNSKGFWRLWKPGMEGMN*MAESPS Trigger: GCTGGGGGACTCTGCCATCCAGTTCATGCCCTCCAT...TCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CAA 90 bp | GCCACAGTCCTGAGAGCTGAGTGGCACCAGGAACTCCAAGGGTTTTaGGAGGCTGTGGAAGCCTGGAGATCCCAGCTGTTGCTGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ATVLRAEWHQELQGF*EAVEAWRSQLLLLF Trigger: AAACAGCAGCAACAGCTGGGATCTCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR TCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGATGTAAGCCTCAGGAATaGATAGGCCAGTGGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGCKPQE*IGQWVA Trigger: TGCCACCCACTGGCCTATTCATTCCTGAGGCTTACA...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCTCTCTGCCAGTTCCACTGCCCTGAAAGCTGACAGGAAGGACTTCCATGGTCCATGGTGCAGCTaGCCTGGGCTCCTAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLLSASSTALKADRKDFHGPWCS*PGLLRR Trigger: TCTCCTTAGGAGCCCAGGTCAGCTGCACCATGGACC...ATGGAAGTCCTTCCTGTCAGCTTTCAGGGCAGTGGAACTGGCAGAGAGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGACCACACATGCACACGGTGCGTGGATGCCTaGATCCCAGCAGCAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLFSPQPWFSLGDHTCTRCVDA*IPAAAD Trigger: GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCG...TGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGATGAAATGTGGAGTAAGCCCTAGGACCCAGGTCAGCTCTAGTCTCGATAGGGGCACAGGGACATaGCGGAGGCAGCTAGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: RWMKCGVSPRTQVSSSLDRGTGT*RRQLAS Trigger: TGAGGCTAGCTGCCTCCGCCATGTCCCTGTGCCCCT...ATCGAGACTAGAGCTGACCTGGGTCCTAGGGCTTACTCCACATTTCATCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CAA 90 bp | CTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTGGAGATCCCAGCTGTaGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LQGFLEAVEAWRSQL*LLFSPQPWFSLGDH Trigger: GTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCCAGCAGACATATAGAAAGTTCCAAGGATACCAGCCACCACTTATTCAGGGTGCGGTGCGTGGATaGCTGGATCCCAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VPQQTYRKFQGYQPPLIQGAVRG*LDPSSS Trigger: GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACC...CTGAATAAGTGGTGGCTGGTATCCTTGGAACTTTCTATATGTCTGCTGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTGGGTCCCCCTACCCCCAGGACTACAGTGTCCACATGAACCACCTCCAGGGAGATCCCAGCTGTTaGTGCTGTTTTCACCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FFGSPYPQDYSVHMNHLQGDPSC*CCFHLS Trigger: GCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCC...CTGGAGGTGGTTCATGTGGACACTGTAGTCCTGGGGGTAGGGGGACCCAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTACCTCGGTTTTGCCCGACTTGGCTTTGCTGGGCTATTGTCTTGCTGTCACTGGGGTGGGCTGTTTaGTCCAGCTTTCTGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CLPRFCPTWLCWAIVLLSLGWAV*SSFLRG Trigger: ACCACGCAGAAAGCTGGAGCAAACAGCCCACCCCAG...TGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCACATCCGGGAATCGGGAATCGGGGCCCTTGCAGCTCTGGCCTCCTGGCTTGCCTCTTCATATTTaGTTCTCCAGTAGAAACCGG | + |
|
Preference number: 2 (lower is better) Translates to: AFTSGNRESGPLQLWPPGLPLHI*FSSRNR Trigger: CCGGTTTCTACTGGAGAACCAAATATGAAGAGGCAA...GCCAGGAGGCCAGAGCTGCAAGGGCCCCGATTCCCGATTCCCGGATGTGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGACTGACTTGATGGCAGTGAATCCCAGACATGCAATTTCTCACACCTTAGGCCCCCACCCCTCTGACTaGACCCAGGAGGGAATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RTDLMAVNPRHAISHTLGPHPSD*TQEGIC Trigger: GCAGATTCCCTCCTGGGTTCAGTCAGAGGGGTGGGG...GCCTAAGGTGTGAGAAATTGCATGTCTGGGATTCACTGCCATCAAGTCAGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | AATAGCTTTGTAAATTCTGCCAATTCACAGAACACGTCCGGAAGGCTGCCCTCTGGTGCGGTGCGTGGATaGCTGGATCCCAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSFVNSANSQNTSGRLPSGAVRG*LDPSSS Trigger: GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACC...AGAGGGCAGCCTTCCGGACGTGTTCTGTGAATTGGCAGAATTTACAAAGCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTGGGTCCCCCTACCCCCAGGACTACAGTGTCCACATGAACCACCTCCAGGATCCCAGCTGTTGCTaGTGTTTTCACCTCAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FFGSPYPQDYSVHMNHLQDPSCC*CFHLSL Trigger: AAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATC...CTGGAGGTGGTTCATGTGGACACTGTAGTCCTGGGGGTAGGGGGACCCAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGAGAGAGAGAAAAGATTCCTCAGAGCTAAGCATAAGCGGACTCTGGAGACCCACCCCACCCCTCTaGCTGAACCCAGGAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KKRERKDSSELSISGLWRPTPPL*LNPGGN Trigger: ATTCCCTCCTGGGTTCAGTCAGAGGGGTGGGGTGGG...TCTCCAGAGTCCGCTTATGCTTAGCTCTGAGGAATCTTTTCTCTCTCTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGTGAGCTGTTCCTCCAACCTGGTTCGCAGGTCCGCTGCAGGTCTGCTTCTAGTGAATCCCAGACATaGAATTTCTCACACCTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SGELFLQPGSQVRCRSASSESQT*NFSHLR Trigger: CCTAAGGTGTGAGAAATTGCATGTCTGGGATTCACT...AGAAGCAGACCTGCAGCGGACCTGCGAACCAGGTTGGAGGAACAGCTCACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTGAGTGGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTGGAGTACTTCCTAAACTATaGCCTACACTTGGACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ELSGTRNSKGFWRLWKPGVLPKL*PTLGPG Trigger: TCCTGGTCCAAGTGTAGGGCATAGTTTAGGAAGTAC...TCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CAA 90 bp | TGCACAACAAAACTGCCTCTGTACTTCCTAAACTATGCCCTACACTaGGACCAGGATCGTCTCTGCAGCCCGTCCTTGCTATCCTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: CTTKLPLYFLNYALH*DQDRLCSPSLLSFL Trigger: TAGAAAGGATAGCAAGGACGGGCTGCAGAGACGATCCTGGTCCAAGTGTAGGGCATAGTTTAGGAAGTACAGAGGCAGTTTTGTTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR GCA 90 bp | AGGCATAGGTCACCCTACCTAGCTGCCACCTTTGTTTTCAATCTGAGAAGAAGAAGGTCTGCTTCTCTCTaGCAGTTCCACTGCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RHRSPYLAATFVFNLRRRRSASL*QFHCPE Trigger: TTCAGGGCAGTGGAACTGGCAGAGAGAAGCAGACCT...TCTTCTTCTCAGATTGAAAACAAAGGTGGCAGCTAGGTAGGGTGACCTATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR GCA 90 bp | AATAGCTTTGTAAATTCTGCCAATTCACAGAACACGTCCGGAAGGCTGCCCTCTTTTGCTCCAGCTTTCTaGGTGGTGTGGGTACACATG | + |
|
Preference number: 2 (lower is better) Translates to: NSFVNSANSQNTSGRLPSFAPAF*VVWVHM Trigger: CATGTGTACCCACACCACGCAGAAAGCTGGAGCAAA...AGAGGGCAGCCTTCCGGACGTGTTCTGTGAATTGGCAGAATTTACAAAGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGAGAGAGAGAAAAGATTCCTCAGAGCTAAGCATAAGCGGACTCTGGAGAGAAACTATGGCGCTCTaGCTGGAGCCAGAGTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KKRERKDSSELSISGLWRETMAL*LEPELR Trigger: CCTTAACTCTGGCTCCAGCCAGAGCGCCATAGTTTC...TCTCCAGAGTCCGCTTATGCTTAGCTCTGAGGAATCTTTTCTCTCTCTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GGCCAGTGGGTGGCAGCCATCCAGACAGGCCATCGGTaGGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQWVAAIQTGHR*GAVRGCLDPSS Trigger: GCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCACCCACTGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GTGGGTGGCAGCCATCCAGACAGGCCATCGGTGCGGTaGGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGGSHPDRPSVR*GAWMPGSQQQQ Trigger: CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCACCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | AGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTaGATGCCTGGATCCCAGCAGCAGCAGACATGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SHPDRPSVRCGA*MPGSQQQQTWG Trigger: GCCCCATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | CGTTGTAAACTAGTGGGGCAGGCGCAGTGCGCACGGTaGCAGCGACGGCGACAGCAGGTGGGTCATAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCKLVGQAQCAR*QRRRQQVGHSG Trigger: CCCGCTATGACCCACCTGCTGTCGCCGTCGCTGCCACCGTGCGCACTGCGCCTGCCCCACTAGTTTACAACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | TCGGGGCCCTTGCAGCTCTGGCCTCCTGGCTTCAGGTaGGCTGTTCCTCCAACCTGGTTCGCAGGTCCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGPLQLWPPGFR*AVPPTWFAGPL Trigger: CAGCGGACCTGCGAACCAGGTTGGAGGAACAGCTCACCTGAAGCCAGGAGGCCAGAGCTGCAAGGGCCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | TGGCAGCCATCCAGACAGGCCATCGGTGCGGTGCGGTaGGTGGATGCCTGGATCCCAGCAGCAGCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: WQPSRQAIGAVR*VDAWIPAAADM Trigger: CATGTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCTGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | GAATCGGGAATCGGGGCCCTTGCAGCTCTGGCCTCCTaGCTTCAGGTGAGCTGTTCCTCCAACCTGGTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: ESGIGALAALAS*LQVSCSSNLVR Trigger: GCGAACCAGGTTGGAGGAACAGCTCACCTGAAGCCAGGAGGCCAGAGCTGCAAGGGCCCCGATTCCCGATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | GGTGCGGGGACCCTGTACAGAACCCAACCAGTGATGTaGGTCGTGAGGCTCGGGTTTATCTGGCGCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAGTLYRTQPVM*VVRLGFIWRLA Trigger: TGCCAGGCGCCAGATAAACCCGAGCCTCACGACTCACATCACTGGTTGGGTTCTGTACAGGGTCCCCGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GGCGAGGACTGGGGTGGGCTGTTTGCTCCAGCTTTCTaGGTGGTGTGGGTACACATGGCTCCAACTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GEDWGGLFAPAF*VVWVHMAPTLQ Trigger: CTGGAGAGTTGGAGCCATGTGTACCCACACCACGCAGAAAGCTGGAGCAAACAGCCCACCCCAGTCCTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | CCTAAGGAGAGGAGGCGAGGACTGGGGTGGGCTGTTTaGTCCAGCTTTCTGCGTGGTGTGGGTACACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PKERRRGLGWAV*SSFLRGVGTHG Trigger: GCCATGTGTACCCACACCACGCAGAAAGCTGGAGCAAACAGCCCACCCCAGTCCTCGCCTCCTCTCCTTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GGTGAGCTGTTCCTCCAACCTGGTTCGCAGGTCCGCTaGAGGTCTGCTTCTCTCTGCCAGTTCCACTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GELFLQPGSQVR*RSASLCQFHCP Trigger: AGGGCAGTGGAACTGGCAGAGAGAAGCAGACCTGCAGCGGACCTGCGAACCAGGTTGGAGGAACAGCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | CAGCTTTCACATCCGGGAATCGGGAATCGGGGCCCTTaGAGCTCTGGCCTCCTGGCTTCAGGTGAGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLSHPGIGNRGP*SSGLLASGELF Trigger: GAACAGCTCACCTGAAGCCAGGAGGCCAGAGCTGCAAGGGCCCCGATTCCCGATTCCCGGATGTGAAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GGGTCACTCTGCCAGACCCCTGTCTTCATCTCACTGTaGTGGACATTTGCAGGCTCCGTGGTGGGGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSLCQTPVFISL*WTFAGSVVGTW Trigger: CCAGGTCCCCACCACGGAGCCTGCAAATGTCCAGCACAGTGAGATGAAGACAGGGGTCTGGCAGAGTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | AGGACTGGGGTGGGCTGTTTGCTCCAGCTTTCTGCGTaGTGTGGGTACACATGGCTCCAACTCTCCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTGVGCLLQLSA*CGYTWLQLSRG Trigger: ACCTCTGGAGAGTTGGAGCCATGTGTACCCACACCACGCAGAAAGCTGGAGCAAACAGCCCACCCCAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACAGTGTCCACATGAACCACCTCCAGGAGCCGCGCCTTCCCATCATAGCCCTTGGAGATCCCAGCTGTaGCTGCTGTTTTCACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQCPHEPPPGAAPSHHSPWRSQL*LLFSPQ Trigger: CTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCA...AGGGCTATGATGGGAAGGCGCGGCTCCTGGAGGTGGTTCATGTGGACACTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 72 bp | CCATTCAAGCCTTCTAAAGTAGGTCCATGGTGCAGCTaGCCTGGGCTCCTAAGGAGAGGAGGCGAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFKPSKVGPWCS*PGLLRRGGEDW Trigger: CCAGTCCTCGCCTCCTCTCCTTAGGAGCCCAGGTCAGCTGCACCATGGACCTACTTTAGAAGGCTTGAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | CATAGCCCTTTGCAGGCCACAGTCCTGAGAGCTGAGTaGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSPLQATVLRAE*HQELQGFLEAV Trigger: CACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGCCTGCAAAGGGCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 72 bp | GTGGTGTGGGTACACATGGCTCCAACTCTCCAGAGGTaGGGAAGGGTTCTTGAAACTATGGCGCTCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VVWVHMAPTLQR*GRVLETMALWL Trigger: CAGCCAGAGCGCCATAGTTTCAAGAACCCTTCCTCACCTCTGGAGAGTTGGAGCCATGTGTACCCACACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | GAACACGTCCGGAAGGCTGCCCTCTCTAGCCTAGTGTaGAAGGTGCTTACTGCCACTCCACTGAGGTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: EHVRKAALSSLV*KVLTATPLRFR Trigger: TCTAAACCTCAGTGGAGTGGCAGTAAGCACCTTGCACACTAGGCTAGAGAGGGCAGCCTTCCGGACGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | CATGGCTCCAACTCTCCAGAGGTGAGGAAGGGTTCTTaGAACTATGGCGCTCTGGCTGGAGCCAGAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGSNSPEVRKGS*NYGALAGARVK Trigger: CTTAACTCTGGCTCCAGCCAGAGCGCCATAGTTTCAAGAACCCTTCCTCACCTCTGGAGAGTTGGAGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | TCTGCTTCTCTCTGCCAGTTCCACTGCCCTGAAAGCTaGCAGGAAGGACTTCCATGCGTTCTATCCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SASLCQFHCPES*QEGLPCVLSLC Trigger: GCAGAGGGATAGAACGCATGGAAGTCCTTCCTGTCAGCTTTCAGGGCAGTGGAACTGGCAGAGAGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | TGGAAGTTTACTCGCTTAGAGGGTTATTCTGATACGTaGCGTGGTGCGGTGCGGGGACCCTGTACAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: WKFTRLEGYSDT*RGAVRGPCTEP Trigger: GGGTTCTGTACAGGGTCCCCGCACCGCACCACGTCACGTATCAGAATAACCCTCTAAGCGAGTAAACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | GGTCCTGTCAGGTGCTCTGAGGCTGTCACTGATATTTaGGGGCCTAAGTGGCAGTCCTGCTGTAGAGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GPVRCSEAVTDI*GPKWQSCCRVA Trigger: TGCAACTCTACAGCAGGACTGCCACTTAGGCCCTCAAATATCAGTGACAGCCTCAGAGCACCTGACAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | TTTTGGAGGCTGTGGAAGCCTGGAGATCCCAGCTGTTaGTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: FWRLWKPGDPSC*CCFHLSLGSLS Trigger: CGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCAGGCTTCCACAGCCTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CCA 72 bp | CAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCTaGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QELQGFLEAVEA*RSQLLLLFSPQ Trigger: CTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCCAGGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 72 bp | AATCCCAGACATGCAATTTCTCACACCTTAGGCTCCTaGGAAACCTTGGTAACCAGGGCCAGGGCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NPRHAISHTLGS*ETLVTRARAGM Trigger: CATCCCTGCCCTGGCCCTGGTTACCAAGGTTTCTCAGGAGCCTAAGGTGTGAGAAATTGCATGTCTGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | GGCAAGCTTTACTTCAGCAGTGATATCAGGGTTCTTTaGGTCCCCCTACCCCCAGGACTACAGTGTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GKLYFSSDIRVL*VPLPPGLQCPH Trigger: ATGTGGACACTGTAGTCCTGGGGGTAGGGGGACCCAAAGAACCCTGATATCACTGCTGAAGTAAAGCTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGACCACACATGCACAGCTTCCAGGACTGACTaGATGGCAGTGAATCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLFSPQPWFSLGDHTCTASRTD*MAVNPR Trigger: TCTGGGATTCACTGCCATCAAGTCAGTCCTGGAAGC...TGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGAGAGAGAGAAAAGATTCCTCAGAGCTAAGCATAAGCGGACTCTGGAGACACTGTGCTGGACATTaGCAGGCTCCGTGGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KKRERKDSSELSISGLWRHCAGH*QAPWWG Trigger: TCCCCACCACGGAGCCTGCAAATGTCCAGCACAGTG...TCTCCAGAGTCCGCTTATGCTTAGCTCTGAGGAATCTTTTCTCTCTCTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | TCATCTCACTGTGCTGGACATTTGCAGGCTCCGTGGTaGGGACCTGGACGTTTTCCAATTGTAGTTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSHCAGHLQAPW*GPGRFPIVVVL Trigger: CAACACAACTACAATTGGAAAACGTCCAGGTCCCCACCACGGAGCCTGCAAATGTCCAGCACAGTGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR CCA 72 bp | CTGGGAGAAACATGCCTACCTCGGTTTTGCCCGACTTaGCTTTGCTGGGCTATTGTCTTGCTGTCAACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGETCLPRFCPT*LCWAIVLLSTS Trigger: ACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCATGTTTCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR TCA 72 bp | AGTGGCAGTCCTGCTGTAGAGTTGCAAGCTGTCTTCTaGTGCTGGCTACTGTCCTTTTATGGGACACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SGSPAVELQAVF*CWLLSFYGTLP Trigger: TGGTAGTGTCCCATAAAAGGACAGTAGCCAGCATCAGAAGACAGCTTGCAACTCTACAGCAGGACTGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | ATGCACAACAAAACTGCCTCTGTACTTCCTAAACTATaGCCTACACTTGGACCAGGATCGTCTCTGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: MHNKTASVLPKL*PTLGPGSSLQP Trigger: GGGCTGCAGAGACGATCCTGGTCCAAGTGTAGGGCATAGTTTAGGAAGTACAGAGGCAGTTTTGTTGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CCA 72 bp | AGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTaGTTCTCTCTCGGTGACCACACATGCACAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSQLLLLFSPQP*FSLGDHTCTTK Trigger: TTTTGTTGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR GCA 72 bp | GGTTTTGCCCGACTTGGCTTTGCTGGGCTATTGTCTTaGTGTCAACAAGTCAGCACCTCACCACATATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GFARLGFAGLLS*CQQVSTSPHMY Trigger: ATACATATGTGGTGAGGTGCTGACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | TATAAAGTTCTGGGAGAAACATGCCTACCTCGGTTTTaGCCGACTTGGCTTTGCTGGGCTATTGTCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YKVLGETCLPRF*PTWLCWAIVLL Trigger: CAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCATGTTTCTCCCAGAACTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCATAGGTCACCCTACCTAGCTGCCACCTTTGTTTTCAATCTGAGAAGAAGACCAATTGTAGTTGTGTaGGGGTGGAGGGAGATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RHRSPYLAATFVFNLRRRPIVVV*GWREIK Trigger: CTTGATCTCCCTCCACCCCAACACAACTACAATTGG...TCTTCTTCTCAGATTGAAAACAAAGGTGGCAGCTAGGTAGGGTGACCTATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| 3UTR GCA 72 bp | TCACCTCAGCCTTGGTTCTCTCTCGGTGACCACACATaGACAACAAAACTGCCTCTGTACTTCCTAAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: SPQPWFSLGDHT*TTKLPLYFLNY Trigger: ATAGTTTAGGAAGTACAGAGGCAGTTTTGTTGTGCATGTGTGGTCACCGAGAGAGAACCAAGGCTGAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR TCA 72 bp | CTATGTATACATACTTATACATGGTCTTCAATCTTTTaGTCCTCCAAGTGCCAGAATTACAGGCATAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCIHTYTWSSIF*SSKCQNYRHRS Trigger: TGACCTATGCCTGTAATTCTGGCACTTGGAGGATCAAAAGATTGAAGACCATGTATAAGTATGTATACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGCTGCAGCAGCCTCTaGGAGACGCCCACCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTGHRCGAVRGCLDPSSSSCSSL*ETPTRQ Trigger: CTGTCGGGTGGGCGTCTCCCAGAGGCTGCTGCAGCT...GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACAGCTGCAGCAGCCTCTaGGAGACGCCCACCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADSCSSL*ETPTRQ Trigger: CTGTCGGGTGGGCGTCTCCCAGAGGCTGCTGCAGCT...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCGGTCACAGAGGAAGGTaGCCATGCCCAGCCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTGHRCGAVRGCLDPSSSGHRGR*PCPAKP Trigger: CGGCTTGGCTGGGCATGGTCACCTTCCTCTGTGACC...GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR TCA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGGGTCACAGAGGAAGGTaGCCATGCCCAGCCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQGHRGR*PCPAKP Trigger: CGGCTTGGCTGGGCATGGTCACCTTCCTCTGTGACC...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGAGTCCCCTCCAGCCATaGCCACAAGGTCCCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQSPLQP*PQGPRC Trigger: GCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACT...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTAGGGGCACAGGGACATGGCGGAGGCAGCTAGCCTCAGCAGCTGTGGCTAGTCCCCTCCAGCCATaGCCACAAGGTCCCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRGTGTWRRQLASAAVASPLQP*PQGPRC Trigger: GCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACT...AGCCACAGCTGCTGAGGCTAGCTGCCTCCGCCATGTCCCTGTGCCCCTAGACGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACCTGCCCACCAGTGATTaGCTGTCCAGCAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADLPTSD*LSSKAR Trigger: CCTGGCCTTGCTGGACAGCCAATCACTGGTGGGCAG...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | GCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCGGATTCCATAGAGCTTaGGCAGGCTCCGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AIQTGHRCGAVRGCLDPSGFHRA*AGSGSP Trigger: TGGAGACCCGGAGCCTGCTCAAGCTCTATGGAATCC...GCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACGGATTCCATAGAGCTTaGGCAGGCTCCGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADGFHRA*AGSGSP Trigger: TGGAGACCCGGAGCCTGCTCAAGCTCTATGGAATCC...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCGAGTGCTGCTGCGGCTaGAGAAGCCATGTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGHRCGAVRGCLDPSSSECCCG*RSHVPS Trigger: ACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTC...GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | AGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGACTACCACTGCCAGCTaGAGCAGCCTCTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SHPDRPSVRCGAWMPGSQTTTAS*SSLWET Trigger: CGTCTCCCAGAGGCTGCTGCAGCTGGCAGTGGTAGT...CTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACCACGTAGACTACCACTaGCAGCTGCAGCAGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADHVDYH*QLQQPL Trigger: CAGAGGCTGCTGCAGCTGGCAGTGGTAGTCTACGTG...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCCACGTAGACTACCACTaGCAGCTGCAGCAGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTGHRCGAVRGCLDPSSSHVDYH*QLQQPL Trigger: CAGAGGCTGCTGCAGCTGGCAGTGGTAGTCTACGTG...GCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACTCCTGTGGGTTCCGTTaGACACCACACACTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADSCGFR*TPHTDQ Trigger: CTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGA...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGAGCTCACGAGTGCTGCTaGGGCTGCAGAAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGHRCGAVRGCLDPSSSRAHECC*GCRSHV Trigger: AACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGC...TCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCGATGCTCTGGACATCTaGCCTGGACTTGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIQTGHRCGAVRGCLDPSDALDI*PGLELV Trigger: CACCAGCTCAAGTCCAGGGCAGATGTCCAGAGCATC...GCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGCCTTTCTGCTGCAGCTaGAAGGAGTACTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQPFCCS*KEYWGQ Trigger: CTGTCCCCAGTACTCCTTCCAGCTGCAGCAGAAAGG...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR GCA 90 bp | GCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACAACTACCACTGCCAGCTaGAGCAGCCTCTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AWIPAAADMGQVQTTPRTTTTAS*SSLWET Trigger: CGTCTCCCAGAGGCTGCTGCAGCTGGCAGTGGTAGT...TGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACACTGACCAGTTTTTATaGCATGGCTGTATGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADTDQFL*HGCMSP Trigger: CGGGGACATACAGCCATGGCATAAAAACTGGTCAGT...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | AGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGATCTCACAGGTCCTGTaGGTTCCGTTGAACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHPDRPSVRCGAWMPGSQISQVL*VPLNTT Trigger: TGTGGTGTTCAACGGAACCCACAGGACCTGTGAGAT...CTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGAGAGTGCTGCTGCGGCTaGAGAAGCCATGTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGECCCG*RSHVPS Trigger: ACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTC...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGGCTCACGAGTGCTGCTaGGGCTGCAGAAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQQQQTWGRCKPLLGHLAHECC*GCRSHV Trigger: AACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGC...CAAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTACTACCACTGCCAGCTaGAGCAGCCTCTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: WIPAAADMGQVQTTPRTLTTTAS*SSLWET Trigger: CGTCTCCCAGAGGCTGCTGCAGCTGGCAGTGGTAGT...AAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGAACTGACCAGTTTTTATaGCATGGCTGTATGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGHRCGAVRGCLDPSSSRTDQFL*HGCMSP Trigger: CGGGGACATACAGCCATGGCATAAAAACTGGTCAGT...TCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCCGTCTTTGGGGCTCTTaGCTCTTCATATTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIQTGHRCGAVRGCLDPSRLWGS*LFIFGS Trigger: AGAACCAAATATGAAGAGGCAAGAGCCCCAAAGACG...GCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGACCGTCTTTGGGGCTCTTaGCTCTTCATATTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAIGAVRCVDAWIPAAADRLWGS*LFIFGS Trigger: AGAACCAAATATGAAGAGGCAAGAGCCCCAAAGACG...GTCTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGGTACGGACTGGAGAGTaGATCATAGAGACAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQVRTGE*IIETML Trigger: AAGCATTGTCTCTATGATCCACTCTCCAGTCCGTAC...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACAAGCTGGAAGGAGTACTaGGGACAGCAGTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWIPAAADMGQVQTTPRTSWKEY*GQQSEP Trigger: AGGCTCTGACTGCTGTCCCCAGTACTCCTTCCAGCT...TGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CCA 90 bp | GATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGCCTTTCTGCTGCAGCTaGAAGGAGTACTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: DAWIPAAADMGQVQTTPRPFCCS*KEYWGQ Trigger: CTGTCCCCAGTACTCCTTCCAGCTGCAGCAGAAAGG...CCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CCA 90 bp | AGCCATCCAGACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGGTTGGTAGTCGTCTTTaGGGCTCTTGCCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SHPDRPSVRCGAWMPGSQVGSRL*GSCLFI Trigger: TATGAAGAGGCAAGAGCCCCAAAGACGACTACCAAC...CTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTCTGGATGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR TCA 90 bp | CACCCCACCCCTCTGACTGAACCCAGGAGGGAATCTGCATTCGGAGTCTGTCGGCACGTTCTCTCCCTGTaGTGGCTTCACAAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPTPLTEPRRESAFGVCRHVLSL*WLHKVS Trigger: GCTGACTTTGTGAAGCCATCACAGGGAGAGAACGTG...CCGACAGACTCCGAATGCAGATTCCCTCCTGGGTTCAGTCAGAGGGGTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGATCCTGTGGGTTCCGTTaGACACCACACACTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPGSQQQQTWGRCKPLLGSCGFR*TPHTDQ Trigger: CTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGA...TCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQHRDNA*NMCCPR Trigger: CCTGGGACAACACATATTTCAAGCATTGTCTCTATG...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTACCTCGGTTTTGCCCGACTTGGCTTTGCTGGGCTATTGTCTTGCTGTCAGAGGCTGCCCACCAGTaGTTGGCTGTCCAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPRFCPTWLCWAIVLLSEAAHQ*LAVQQG Trigger: GCCTTGCTGGACAGCCAATCACTGGTGGGCAGCCTC...TGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | TCACACCTTAGGCTCCTGAGAAACCTTGGTAACCAGGGCCAGGGCAGGGATGGACACGTAGACTACCACTaGCAGCTGCAGCAGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLRLLRNLGNQGQGRDGHVDYH*QLQQPL Trigger: CAGAGGCTGCTGCAGCTGGCAGTGGTAGTCTACGTG...TCCATCCCTGCCCTGGCCCTGGTTACCAAGGTTTCTCAGGAGCCTAAGGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGGGGATGCTCTGGACATCTaGCCTGGACTTGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPAAADMGQVQTTPRTLGDALDI*PGLELV Trigger: CACCAGCTCAAGTCCAGGGCAGATGTCCAGAGCATC...CCCAAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | GGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGCTAGCAGGGGCTTCCTaGGCACAGCACCACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPSCCCCFHLSLGSLSVLAGAS*AQHHSP Trigger: TGGAGAGTGGTGCTGTGCCCAGGAAGCCCCTGCTAG...CACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR TCA 90 bp | GGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGCACGTTCTCTCCCTGTaGTGGCTTCACAAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQQQQTWGRCKPLLGHLHVLSL*WLHKVS Trigger: GCTGACTTTGTGAAGCCATCACAGGGAGAGAACGTG...CAAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | TCACACCTTAGGCTCCTGAGAAACCTTGGTAACCAGGGCCAGGGCAGGGATGGAGATGCTCTGGACATCTaGCCTGGACTTGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLRLLRNLGNQGQGRDGDALDI*PGLELV Trigger: CACCAGCTCAAGTCCAGGGCAGATGTCCAGAGCATC...TCCATCCCTGCCCTGGCCCTGGTTACCAAGGTTTCTCAGGAGCCTAAGGTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTTTGCTGGGCTATTGTCTTGCTGTCAACAAGTCAGCACCTCACCACATAGCTGCAGCAGCCTCTaGGAGACGCCCACCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGFAGLLSCCQQVSTSPHSCSSL*ETPTRQ Trigger: CTGTCGGGTGGGCGTCTCCCAGAGGCTGCTGCAGCT...ATGTGGTGAGGTGCTGACTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGGGTCCCCCTACCCCCAGGACTACAGTGTCCACATGAACCACCTCCAGCACGTTCTCTCCCTGTaGTGGCTTCACAAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFGSPYPQDYSVHMNHLQHVLSL*WLHKVS Trigger: GCTGACTTTGTGAAGCCATCACAGGGAGAGAACGTG...CTGGAGGTGGTTCATGTGGACACTGTAGTCCTGGGGGTAGGGGGACCCAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR TCA 90 bp | GACCATGCCCAGCCAAGCCGCTCCTGTGCCCACTGTGATGGCCGTAGGGATGAGCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHAQPSRSCAHCDGRRDEHRDNA*NMCCPR Trigger: CCTGGGACAACACATATTTCAAGCATTGTCTCTATG...CTCATCCCTACGGCCATCACAGTGGGCACAGGAGCGGCTTGGCTGGGCATGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTACCTCGGTTTTGCCCGACTTGGCTTTGCTGGGCTATTGTCTTGCTGTCAGAGTGCTGCTGCGGCTaGAGAAGCCATGTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPRFCPTWLCWAIVLLSECCCG*RSHVPS Trigger: ACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTC...TGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTTTGTACCCTTTCTGCTaGAGCTGGAAGGAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WIPAAADMGQVQTTPRTLLYPFC*SWKEYW Trigger: CCAGTACTCCTTCCAGCTGCAGCAGAAAGGGTACAA...AAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CCA 90 bp | AGGACTGACTTGATGGCAGTGAATCCCAGACATGCAATTTCTCACACCTTAGGCAGTCCCCTCCAGCCATaGCCACAAGGTCCCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTDLMAVNPRHAISHTLGSPLQP*PQGPRC Trigger: GCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACT...GCCTAAGGTGTGAGAAATTGCATGTCTGGGATTCACTGCCATCAAGTCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | TATCCCAACTCCCCTCTAGTCCCGCTGAAGCTTTGTCCTCCATTTTCCCAAGCCAGCTGGAAGGAGTACTaGGGACAGCAGTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPNSPLVPLKLCPPFSQASWKEY*GQQSEP Trigger: AGGCTCTGACTGCTGTCCCCAGTACTCCTTCCAGCT...GGCTTGGGAAAATGGAGGACAAAGCTTCAGCGGGACTAGAGGGGAGTTGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR TCA 90 bp | CAGAACCCTCTTCCTTCCCAAGCCCTAAACTTTAACCAGCAGGGAGAGGGTGTATCCTGTGGGTTCCGTTaGACACCACACACTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNPLPSQALNFNQQGEGVSCGFR*TPHTDQ Trigger: CTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGA...TACACCCTCTCCCTGCTGGTTAAAGTTTAGGGCTTGGGAAGGAAGAGGGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | GGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGTTGTACCCTTTCTGCTaGAGCTGGAAGGAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDPSCCCCFHLSLGSLSVLYPFC*SWKEYW Trigger: CCAGTACTCCTTCCAGCTGCAGCAGAAAGGGTACAA...CACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGAGCTGTTCCTCCAACCTGGTTCGCAGGTCCGCTGCAGGTCTGCTTCTGTACGGACTGGAGAGTaGATCATAGAGACAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGELFLQPGSQVRCRSASVRTGE*IIETML Trigger: AAGCATTGTCTCTATGATCCACTCTCCAGTCCGTAC...AGAAGCAGACCTGCAGCGGACCTGCGAACCAGGTTGGAGGAACAGCTCACCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTTTGAACACCACACACTaGCCAGTTTTTATGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WIPAAADMGQVQTTPRTLLNTTH*PVFMPW Trigger: CCATGGCATAAAAACTGGTCAGTGTGTGGTGTTCAA...AAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | AGGACTGACTTGATGGCAGTGAATCCCAGACATGCAATTTCTCACACCTTAGGCGGATTCCATAGAGCTTaGGCAGGCTCCGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTDLMAVNPRHAISHTLGGFHRA*AGSGSP Trigger: TGGAGACCCGGAGCCTGCTCAAGCTCTATGGAATCC...GCCTAAGGTGTGAGAAATTGCATGTCTGGGATTCACTGCCATCAAGTCAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | AATAGCTTTGTAAATTCTGCCAATTCACAGAACACGTCCGGAAGGCTGCCCTCTCTAGCAGGGGCTTCCTaGGCACAGCACCACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSFVNSANSQNTSGRLPSLAGAS*AQHHSP Trigger: TGGAGAGTGGTGCTGTGCCCAGGAAGCCCCTGCTAG...AGAGGGCAGCCTTCCGGACGTGTTCTGTGAATTGGCAGAATTTACAAAGCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGCTGAGTGGCACCAGGAACTCCAAGGGTTTTTGGAGGCTGTGGAAGCCGTACGGACTGGAGAGTaGATCATAGAGACAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEWHQELQGFLEAVEAVRTGE*IIETML Trigger: AAGCATTGTCTCTATGATCCACTCTCCAGTCCGTAC...GGCTTCCACAGCCTCCAAAAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGGGTTGCCTCTTCATATTTaGTTCTCCAGTAGAAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: IPAAADMGQVQTTPRTLGLPLHI*FSSRNR Trigger: CCGGTTTCTACTGGAGAACCAAATATGAAGAGGCAA...CCCAAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR TCA 90 bp | GGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGTTGAACACCACACACTaGCCAGTTTTTATGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GDPSCCCCFHLSLGSLSVLNTTH*PVFMPW Trigger: CCATGGCATAAAAACTGGTCAGTGTGTGGTGTTCAA...CACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR CCA 90 bp | TCACACCTTAGGCTCCTGAGAAACCTTGGTAACCAGGGCCAGGGCAGGGATGGATTGCCTCTTCATATTTaGTTCTCCAGTAGAAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLRLLRNLGNQGQGRDGLPLHI*FSSRNR Trigger: CCGGTTTCTACTGGAGAACCAAATATGAAGAGGCAA...TCCATCCCTGCCCTGGCCCTGGTTACCAAGGTTTCTCAGGAGCCTAAGGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CAA 72 bp | GAATTATCCCAACTCCCCTCTAGTCCCGCTGAAGCTTaGTCCTCCATTTTCCCAAGCCAGAACCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELSQLPSSPAEA*SSIFPSQNPLP Trigger: AGGAAGAGGGTTCTGGCTTGGGAAAATGGAGGACAAAGCTTCAGCGGGACTAGAGGGGAGTTGGGATAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| 3UTR CAA 72 bp | AAACTGCCTCTGTACTTCCTAAACTATGCCCTACACTaGGACCAGGATCGTCTCTGCAGCCCGTCCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLPLYFLNYALH*DQDRLCSPSLL Trigger: TAGCAAGGACGGGCTGCAGAGACGATCCTGGTCCAAGTGTAGGGCATAGTTTAGGAAGTACAGAGGCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| 3UTR CAA 72 bp | TCTGGGAGAAACATGCCTACCTCGGTTTTGCCCGACTaGGCTTTGCTGGGCTATTGTCTTGCTGTCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRNMPTSVLPD*ALLGYCLAVNK Trigger: CTTGTTGACAGCAAGACAATAGCCCAGCAAAGCCAAGTCGGGCAAAACCGAGGTAGGCATGTTTCTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR CCA 90 bp | GGCATGAACTGGATGGCAGAGTCCCCCAGCAGACATATAGAAAGTTCCAAGGATATCTCACAGGTCCTGTaGGTTCCGTTGAACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GMNWMAESPSRHIESSKDISQVL*VPLNTT Trigger: TGTGGTGTTCAACGGAACCCACAGGACCTGTGAGAT...ATCCTTGGAACTTTCTATATGTCTGCTGGGGGACTCTGCCATCCAGTTCATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR GCA 90 bp | AGTCGTCTTTGGGGCTCTTGCCTCTTCATATTTGGTTCTCCAGTAGAAACCGGCACTGACCAGTTTTTATaGCATGGCTGTATGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLWGSCLFIFGSPVETGTDQFL*HGCMSP Trigger: CGGGGACATACAGCCATGGCATAAAAACTGGTCAGT...GCCGGTTTCTACTGGAGAACCAAATATGAAGAGGCAAGAGCCCCAAAGACGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCCCAGCAGACATATAGAAAGTTCCAAGGATACCAGCCACCACTTATTCAGCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPQQTYRKFQGYQPPLIQHRDNA*NMCCPR Trigger: CCTGGGACAACACATATTTCAAGCATTGTCTCTATG...CTGAATAAGTGGTGGCTGGTATCCTTGGAACTTTCTATATGTCTGCTGGGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS CCA 90 bp | CAGCACCACCCAGCAAGGCCAGGTCCTCAAAGTCCCCTCCAGCCATaGCCACAAGGTCCCCGATGCGGAACACTGGGCAGTACGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QHHPARPGPQSPLQP*PQGPRCGTLGSTDW Trigger: CCAGTCCGTACTGCCCAGTGTTCCGCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACTTTGAGGACCTGGCCTTGCTGGGTGGTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS CCA 90 bp | ATTGGCTGTCCAGCAAGGCCAGGTCCTCAAAGTCCCCTCCAGCCATaGCCACAAGGTCCCCGATGCGGAACACTGGGCAGTACGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: IGCPARPGPQSPLQP*PQGPRCGTLGSTDW Trigger: CCAGTCCGTACTGCCCAGTGTTCCGCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACTTTGAGGACCTGGCCTTGCTGGACAGCCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | AAAACGGATTCCATAGAGCTTGAGCAGGCTCCGGGTCTCCACGCCTaGGGCTGCCCACCAGTGATTGGCTGTCCAGCAAGGCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTDSIELEQAPGLHA*GCPPVIGCPARPGP Trigger: AGGACCTGGCCTTGCTGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGGAGACCCGGAGCCTGCTCAAGCTCTATGGAATCCGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS GCA 90 bp | CCAGGTCCTCAAAGTCCCCTCCAGCCATGGCCACAAGGTCCCCGATaGGGAACACTGGGCAGTACGGACTGGAGAGTGGATCATAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPQSPLQPWPQGPR*GTLGSTDWRVDHRD Trigger: GTCTCTATGATCCACTCTCCAGTCCGTACTGCCCAGTGTTCCGCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACTTTGAGGACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | TGGGGACAGCAGTCAGAGCCTTTCGTGTCCAGGTTGCAATCCCAGTaGATGCTGATGCCCACAGCACCACCCAGCAAGGCCAGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGQQSEPFVSRLQSQ*MLMPTAPPSKARSS Trigger: TGAGGACCTGGCCTTGCTGGGTGGTGCTGTGGGCATCAGCATTCACTGGGATTGCAACCTGGACACGAAAGGCTCTGACTGCTGTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CAA 90 bp | GACAGGCCATCGGTGCGGTGCGGTGCGTGGATGCCTGGATCCCAGCAGCAGCAGGTTACAGAAACCCCCTaGAGTTTGGTGATGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRPSVRCGAWMPGSQQQQVTETP*SLVMTE Trigger: TTCTGTCATCACCAAACTCAAGGGGGTTTCTGTAAC...CTGCTGCTGCTGGGATCCAGGCATCCACGCACCGCACCGCACCGATGGCCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | AGCAGTCAGAGCCTTTCGTGTCCAGGTTGCAATCCCAGTGAATGCTaGTGCCCACAGCACCACCCAGCAAGGCCAGGTCCTCAAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQSLSCPGCNPSEC*CPQHHPARPGPQSP Trigger: GGGACTTTGAGGACCTGGCCTTGCTGGGTGGTGCTGTGGGCATCAGCATTCACTGGGATTGCAACCTGGACACGAAAGGCTCTGACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACAGGTGTCACGAGGAAGTaGGTTACCAGGAAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: AWIPAAADMGQVQTTPRTGVTRK*VTRKNT Trigger: CGTGTTCTTCCTGGTAACCAACTTCCTCGTGACACC...TGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGGCTGTCCTGAAGTaGTACCCTTTCTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSQQQQTWGRCKPLLGHLAVLK*YPFCCS Trigger: GCTGCAGCAGAAAGGGTACAACTTCAGGACAGCCAA...GTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS-3UTR CAA 90 bp | GATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGTTGGCTGTCCTGAAGTaGTACCCTTTCTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DAWIPAAADMGQVQTTPRLAVLK*YPFCCS Trigger: GCTGCAGCAGAAAGGGTACAACTTCAGGACAGCCAA...CCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS GCA 90 bp | TTTCTCCGTCTTGTAATCCAGAAACCCCCAGCTCACGAGTGCTGCTaGGGCTGCAGAAGCCATGTTCCCAGTTCCTGCTGGCTGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRLVIQKPPAHECC*GCRSHVPSSCWLQL Trigger: CAGTTGCAGCCAGCAGGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAGACGGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | AAAACGGATTCCATAGAGCTTGAGCAGGCTCCGGGTCTCCACGCCTaGGGCTGCCCACCAGTGATTGGCTGTCCTGAAGTTGTACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTDSIELEQAPGLHA*GCPPVIGCPEVVPF Trigger: AAAGGGTACAACTTCAGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGGAGACCCGGAGCCTGCTCAAGCTCTATGGAATCCGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS GCA 90 bp | CACATATTTCTCCGTCTTGTAATCCAGAAACCCCCAGCTCACGAGTaGTGCTGCGGCTGCAGAAGCCATGTTCCCAGTTCCTGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HIFLRLVIQKPPAHE*CCGCRSHVPSSCWL Trigger: CAGCCAGCAGGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAGACGGAGAAATATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS CCA 90 bp | AAAGTCCCCTCCAGCCATGGCCACAAGGTCCCCGATGCGGAACACTaGGCAGTACGGACTGGAGAGTGGATCATAGAGACAATGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KVPSSHGHKVPDAEH*AVRTGEWIIETMLE Trigger: TTCAAGCATTGTCTCTATGATCCACTCTCCAGTCCGTACTGCCCAGTGTTCCGCATCGGGGACCTTGTGGCCATGGCTGGAGGGGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | CCACTGGGCACCAGCTCCAGATCTCACAGGTCCTGTGGGTTCCGTTaGACACCACACACTGACCAGTTTTTATGCCATGGCTGTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLGTSSRSHRSCGFR*TPHTDQFLCHGCMS Trigger: GGACATACAGCCATGGCATAAAAACTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGACCTGTGAGATCTGGAGCTGGTGCCCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS GCA 90 bp | ATATTTCTCCGTCTTGTAATCCAGAAACCCCCAGCTCACGAGTGCTaGTGCGGCTGCAGAAGCCATGTTCCCAGTTCCTGCTGGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IFLRLVIQKPPAHEC*CGCRSHVPSSCWLQ Trigger: TTGCAGCCAGCAGGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAGACGGAGAAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | GGAGATCCCAGCTGTTGCTGCTGTTTTCACCTCAGCCTTGGTTCTCTCTCGGTGGGTGTCACGAGGAAGTaGGTTACCAGGAAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: GDPSCCCCFHLSLGSLSVGVTRK*VTRKNT Trigger: CGTGTTCTTCCTGGTAACCAACTTCCTCGTGACACC...CACCGAGAGAGAACCAAGGCTGAGGTGAAAACAGCAGCAACAGCTGGGATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR CAA 90 bp | CAAGCCGCTCCTGTGCCCACTGTGATGGCCGTAGGGATGAGCGCGAACTTCCCTTTGGATCTGGAGAAGTaGAACTTGCTGAAGGTTACA | + |
|
Preference number: 5 (lower is better) Translates to: QAAPVPTVMAVGMSANFPLDLEK*NLLKVT Trigger: TGTAACCTTCAGCAAGTTCAACTTCTCCAGATCCAA...AGGGAAGTTCGCGCTCATCCCTACGGCCATCACAGTGGGCACAGGAGCGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | CTGAAGGTTACAGTATTTTTGATGAAGAGTGTGAAGTTCTTGGCCTaGGCTAGCAGGGGCTTCCTGGGCACAGCACCACTCTCCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVTVFLMKSVKFLA*ASRGFLGTAPLSTG Trigger: CCCAGTGGAGAGTGGTGCTGTGCCCAGGAAGCCCCTGCTAGCTCAGGCCAAGAACTTCACACTCTTCATCAAAAATACTGTAACCTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGCAGGCCACAGTCCTGAGAGCTGAGTGGCACCAGGAACTCCAAGGGTTTGTTACAGAAACCCCCTaGAGTTTGGTGATGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLQATVLRAEWHQELQGFVTETP*SLVMTE Trigger: TTCTGTCATCACCAAACTCAAGGGGGTTTCTGTAAC...AAACCCTTGGAGTTCCTGGTGCCACTCAGCTCTCAGGACTGTGGCCTGCAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023441.11 |
||
| CDS-3UTR CAA 90 bp | GATGCCTGGATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGCTGGAGAAGTTGAACTaGCTGAAGGTTACAGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: DAWIPAAADMGQVQTTPRLEKLN*LKVTVF Trigger: AAATACTGTAACCTTCAGCAAGTTCAACTTCTCCAG...CCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGATCCAGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGCAGCAGCAGACATGGGGCAGGTGCAAACCACTCCTAGGACACTTGGGCTGGAGAAGTTGAACTaGCTGAAGGTTACAGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: IPAAADMGQVQTTPRTLGLEKLN*LKVTVF Trigger: AAATACTGTAACCTTCAGCAAGTTCAACTTCTCCAG...CCCAAGTGTCCTAGGAGTGGTTTGCACCTGCCCCATGTCTGCTGCTGCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACCCTCTTCCTTCCCAAGCCCTAAACTTTAACCAGCAGGGAGAGGGTGTATTGGATCTGGAGAAGTaGAACTTGCTGAAGGTTACA | + |
|
Preference number: 5 (lower is better) Translates to: QNPLPSQALNFNQQGEGVLDLEK*NLLKVT Trigger: TGTAACCTTCAGCAAGTTCAACTTCTCCAGATCCAA...TACACCCTCTCCCTGCTGGTTAAAGTTTAGGGCTTGGGAAGGAAGAGGGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS TCA 90 bp | ACACTGGGCAGTACGGACTGGAGAGTGGATCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGGTTAATAAGGCATTGGATCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLGSTDWRVDHRDNA*NMCCPRLIRHWIWA Trigger: TGCCCAGATCCAATGCCTTATTAACCTGGGACAACACATATTTCAAGCATTGTCTCTATGATCCACTCTCCAGTCCGTACTGCCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171002.10 |
||
| CDS TCA 90 bp | ACACTGGGCAGTACGGACTGGAGAGTGGATCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGGTTAATAAGGCATTGGATCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLGSTDWRVDHRDNA*NMCCPRLIRHWIWR Trigger: TCTCCAGATCCAATGCCTTATTAACCTGGGACAACACATATTTCAAGCATTGTCTCTATGATCCACTCTCCAGTCCGTACTGCCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS-3UTR CAA 90 bp | AATAGCTTTGTAAATTCTGCCAATTCACAGAACACGTCCGGAAGGCTGCCCTCTGTTACAGAAACCCCCTaGAGTTTGGTGATGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSFVNSANSQNTSGRLPSVTETP*SLVMTE Trigger: TTCTGTCATCACCAAACTCAAGGGGGTTTCTGTAAC...AGAGGGCAGCCTTCCGGACGTGTTCTGTGAATTGGCAGAATTTACAAAGCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS GCA 72 bp | GGCCAAGAGGGCCCACCCTATCACGTAGACTACCACTaGCAGCTGCAGCAGCCTCTGGGAGACGCCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: GQEGPPYHVDYH*QLQQPLGDAHP Trigger: CGGGTGGGCGTCTCCCAGAGGCTGCTGCAGCTGGCAGTGGTAGTCTACGTGATAGGGTGGGCCCTCTTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 72 bp | TCCATAGAGCTTGAGCAGGCTCCGGGTCTCCACGCCTaGGGCTGCCCACCAGTGATTGGCTGTCCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIELEQAPGLHA*GCPPVIGCPAR Trigger: CCTTGCTGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGGAGACCCGGAGCCTGCTCAAGCTCTATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231806.2 |
||
| CDS TCA 72 bp | AGGCTCCGGGTCTCCACGCCTGAGGCTGCCCACCAGTaGTTGGCTGTCCTGAAGTTGTACCCTTTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLRVSTPEAAHQ*LAVLKLYPFCC Trigger: GCAGCAGAAAGGGTACAACTTCAGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGGAGACCCGGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS TCA 72 bp | TCCATAGAGCTTGAGCAGGCTCCGGGTCTCCACGCCTaGGGCTGCCCACCAGTGATTGGCTGTCCTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SIELEQAPGLHA*GCPPVIGCPEV Trigger: AACTTCAGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGGAGACCCGGAGCCTGCTCAAGCTCTATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS TCA 72 bp | AGCCTTTCGTGTCCAGGTTGCAATCCCAGTGAATGCTaGTGCCCACAGCACCACCCAGCAAGGCCAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSCPGCNPSEC*CPQHHPARPGP Trigger: AGGACCTGGCCTTGCTGGGTGGTGCTGTGGGCATCAGCATTCACTGGGATTGCAACCTGGACACGAAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS TCA 72 bp | CCACGCCTGAGGCTGCCCACCAGTGATTGGCTGTCCTaGAGTTGTACCCTTTCTGCTGCAGCTGGAAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRLRLPTSDWLS*SCTLSAAAGRS Trigger: ACTCCTTCCAGCTGCAGCAGAAAGGGTACAACTTCAGGACAGCCAATCACTGGTGGGCAGCCTCAGGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS GCA 72 bp | CTTGTAATCCAGAAACCCCCAGCTCACGAGTGCTGCTaGGGCTGCAGAAGCCATGTTCCCAGTTCCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVIQKPPAHECC*GCRSHVPSSCW Trigger: CCAGCAGGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS GCA 72 bp | CGTCTTGTAATCCAGAAACCCCCAGCTCACGAGTGCTaGTGCGGCTGCAGAAGCCATGTTCCCAGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLVIQKPPAHEC*CGCRSHVPSSC Trigger: GCAGGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS GCA 72 bp | CTCCGTCTTGTAATCCAGAAACCCCCAGCTCACGAGTaGTGCTGCGGCTGCAGAAGCCATGTTCCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRLVIQKPPAHE*CCGCRSHVPSS Trigger: GGAACTGGGAACATGGCTTCTGCAGCCGCAGCAGCACTCGTGAGCTGGGGGTTTCTGGATTACAAGACGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS CCA 72 bp | TCCAGCCATGGCCACAAGGTCCCCGATGCGGAACACTaGGCAGTACGGACTGGAGAGTGGATCATAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSHGHKVPDAEH*AVRTGEWIIET Trigger: TGTCTCTATGATCCACTCTCCAGTCCGTACTGCCCAGTGTTCCGCATCGGGGACCTTGTGGCCATGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS GCA 72 bp | CACTGTGATGGCCGTAGGGATGAGCGCGAACTTCCCTaGCTGCCCAGTGACAAGAATGTCAAAACGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCDGRRDERELP*LPSDKNVKTDS Trigger: GGAATCCGTTTTGACATTCTTGTCACTGGGCAGGCAGGGAAGTTCGCGCTCATCCCTACGGCCATCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS CCA 72 bp | AAGTTGTACCCTTTCTGCTGCAGCTGGAAGGAGTACTaGGGACAGCAGTCAGAGCCTTTCGTGTCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KLYPFCCSWKEY*GQQSEPFVSRL Trigger: CAACCTGGACACGAAAGGCTCTGACTGCTGTCCCCAGTACTCCTTCCAGCTGCAGCAGAAAGGGTACAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS CCA 72 bp | TTGGCTGTCCTGAAGTTGTACCCTTTCTGCTGCAGCTaGAAGGAGTACTGGGGACAGCAGTCAGAGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAVLKLYPFCCS*KEYWGQQSEPF Trigger: GAAAGGCTCTGACTGCTGTCCCCAGTACTCCTTCCAGCTGCAGCAGAAAGGGTACAACTTCAGGACAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 |
||
| CDS TCA 72 bp | TCACAGGTCCTGTGGGTTCCGTTGAACACCACACACTaGCCAGTTTTTATGCCATGGCTGTATGTCCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQVLWVPLNTTH*PVFMPWLYVPV Trigger: GACGGGGACATACAGCCATGGCATAAAAACTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGACCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 72 bp | ACCAGCTCCAGATCTCACAGGTCCTGTGGGTTCCGTTaGACACCACACACTGACCAGTTTTTATGCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSRSHRSCGFR*TPHTDQFLCHG Trigger: GCCATGGCATAAAAACTGGTCAGTGTGTGGTGTTCAACGGAACCCACAGGACCTGTGAGATCTGGAGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS TCA 72 bp | ACAGTATTTTTGATGAAGAGTGTGAAGTTCTTGGCCTaGGCTAGCAGGGGCTTCCTGGGCACAGCACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: TVFLMKSVKFLA*ASRGFLGTAPL Trigger: GAGTGGTGCTGTGCCCAGGAAGCCCCTGCTAGCTCAGGCCAAGAACTTCACACTCTTCATCAAAAATACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||
| CDS TCA 72 bp | AGTACGGACTGGAGAGTGGATCATAGAGACAATGCTTaGAATATGTGTTGTCCCAGGTTAATAAGGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: STDWRVDHRDNA*NMCCPRLIRHW Trigger: CCAATGCCTTATTAACCTGGGACAACACATATTTCAAGCATTGTCTCTATGATCCACTCTCCAGTCCGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023441.11 ENSMUST00000171002.10 ENSMUST00000231806.2 |
||
| CDS CAA 90 bp | GTGTTGTCCCAGGTTAATAAGGCATTGGATCTGGAGAAGTTGAACTaGCTGAAGGTTACAGTATTTTTGATGAAGAGTGTGAAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLSQVNKALDLEKLN*LKVTVFLMKSVKFL Trigger: CAAGAACTTCACACTCTTCATCAAAAATACTGTAACCTTCAGCAAGTTCAACTTCTCCAGATCCAATGCCTTATTAACCTGGGACAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023441.11 ENSMUST00000231806.2 |
||