Pregenerated sensors for P2RX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027071Ensembl transcript IDs: ENSMUST00000028465.14, ENSMUST00000111613.8, ENSMUST00000111616.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGATAGAGTGGCCTGTTaGAGGTTCTGCAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GSTACLLNSEGLDTWSLGDRVAC*RFCSPR Trigger: CCTTGGGCTGCAGAACCTTCAACAGGCCACTCTATC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGATAGAGTGGCCTGTTaGAGGTTCTGCAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VGSMDVTLATIFSILWKWDRVAC*RFCSPR Trigger: CCTTGGGCTGCAGAACCTTCAACAGGCCACTCTATC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| 3UTR TCA 72 bp | GGTCTTAGCGGGAAGCACTGCCTGTCTGCTGAACAGTaGGGGTCTAGATACCTGGTCTTTGGGGTGAACATC | + |
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Preference number: 3 (lower is better) Translates to: GLSGKHCLSAEQ*GSRYLVFGVNI Trigger: GATGTTCACCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCCCGCTAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGTCACGCAGCGGCCGGTaGGGATCCCCGGGAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGSRSGR*GSPGSA Trigger: AGCGCTTCCCGGGGATCCTCACCGGCCGCTGCGTGA...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCCGTGCGGGCCAGCTTaGCAAAATCCTGCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGPCGPA*QNPAQQ Trigger: TTGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CCA 90 bp | GATGGGAGGCATGCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTCCGTGCGGGCCAGCTTaGCAAAATCCTGCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: DGRHARGKGKIQVLAGSTPCGPA*QNPAQQ Trigger: TTGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGG...AGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGCATGCCTCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGAGGCCCCCGAGTCTGTaGACTGCTTCTCTACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGKGKIQVLAGSTACLLRPPSL*TASLQW Trigger: CCACTGTAGAGAAGCAGTCCACAGACTCGGGGGCCT...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAGGCCCCCGAGTCTGTaGACTGCTTCTCTACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGRPPSL*TASLQW Trigger: CCACTGTAGAGAAGCAGTCCACAGACTCGGGGGCCT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAAGCCTTCAGGAGCGTaGGGTACTCGCTGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGKPSGA*GTRCHS Trigger: AGAATGGCAGCGAGTACCGCACGCTCCTGAAGGCTT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGCACATCAAAGCGGATaGCGAAAGCCTTCAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGAHQSG*RKPSGA Trigger: CGCTCCTGAAGGCTTTCGGCATCCGCTTTGATGTGC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCTACTGAGGACTCAATaGCCGTGTCCCGCACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGLLRTQ*PCPALG Trigger: ACCAAGTGCGGGACACGGCCATTGAGTCCTCAGTAG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGCGTGCGGTACTCGCTaGCATTCTCCATCTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGACGTR*HSPSCS Trigger: ACTACAAGATGGAGAATGGCAGCGAGTACCGCACGC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GATGGGAGGCATGCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCACATCAAAGCGGATaGCGAAAGCCTTCAGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: DGRHARGKGKIQVLAGSTAHQSG*RKPSGA Trigger: CGCTCCTGAAGGCTTTCGGCATCCGCTTTGATGTGC...AGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGCATGCCTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGGAGATAATCAGCAGCTaGACGGCTCGGTTGATGATC | + |
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Preference number: 4 (lower is better) Translates to: ARGKGKIQVLAGSTACLLEIISS*TARLMI Trigger: GATCATCAACCGAGCCGTTCAGCTGCTGATTATCTC...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGAGATAATCAGCAGCTaGACGGCTCGGTTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGEIISS*TARLMI Trigger: GATCATCAACCGAGCCGTTCAGCTGCTGATTATCTC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAATCCGACACATCCATaGCTCTGTTGGCATAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGNPTHP*LCWHSV Trigger: GACGCTATGCCAACAGAGTCATGGATGTGTCGGATT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGTATTTGGGAATGCACTaGTCCCAGGCCTTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGYLGMH*SQALSR Trigger: TCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATA...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR TCA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGTACCTTTGTTACTACTaGGGACTCAATGGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARGKGKIQVLAGSTACLLYLCYY*GLNGRV Trigger: GACACGGCCATTGAGTCCTCAGTAGTAACAAAGGTA...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGTACCTTTGTTACTACTaGGGACTCAATGGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGYLCYY*GLNGRV Trigger: GACACGGCCATTGAGTCCTCAGTAGTAACAAAGGTA...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGTTCCCTTCTCAAAGTTaGAGAGAGGGAAACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGFPSQS*REGNGC Trigger: GCATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAA...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAGCTTGGCAAAATCCTaGCCAGCAAACTTAACCACG | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGSLAKS*PANLTT Trigger: CGTGGTTAAGTTTGCTGGGCAGGATTTTGCCAAGCT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAGGAATATTTGGGAATaGACTGGTCCCAGGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGRNIWE*TGPRPC Trigger: ACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR TCA 90 bp | GATGGGAGGCATGCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTTTCCCTTCTCAAAGTTaGAGAGAGGGAAACGGATGC | + |
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Preference number: 4 (lower is better) Translates to: DGRHARGKGKIQVLAGSTFPSQS*REGNGC Trigger: GCATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAA...AGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGCATGCCTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAGTATTTGGCAAACCTaGAGTTGTAGCCAGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGSIWQT*SCSQGK Trigger: TTTCCCCTGGCTACAACTTCAGGTTTGCCAAATACT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR GCA 90 bp | GATGGGAGGCATGCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTAGCTTGGCAAAATCCTaGCCAGCAAACTTAACCACG | + |
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Preference number: 4 (lower is better) Translates to: DGRHARGKGKIQVLAGSTSLAKS*PANLTT Trigger: CGTGGTTAAGTTTGCTGGGCAGGATTTTGCCAAGCT...AGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGCATGCCTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGAGCCAGGGGAAACACTaGTTTTCTCAGAAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GSTACLLNSEGLDTWSLGSQGKH*FSQKLH Trigger: ATGGAGTTTCTGAGAAAAGCAGTGTTTCCCCTGGCT...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CCA 90 bp | AGGATTATTTTAAGGGTGCAAAGAGATAATGTGTATGGGAGTCCCTGGTATGTGAGGCCCCCGAGTCTGTaGACTGCTTCTCTACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RIILRVQRDNVYGSPWYVRPPSL*TASLQW Trigger: CCACTGTAGAGAAGCAGTCCACAGACTCGGGGGCCT...CACATACCAGGGACTCCCATACACATTATCTCTTTGCACCCTTAAAATAATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | CTGGTATGTGGTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTAATCCGACACATCCATaGCTCTGTTGGCATAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: LVCGRFYGCNLSYHFLYPNPTHP*LCWHSV Trigger: GACGCTATGCCAACAGAGTCATGGATGTGTCGGATT...AGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTACCACATACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGCGTGCGGTACTCGCTaGCATTCTCCATCTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VGSMDVTLATIFSILWKWACGTR*HSPSCS Trigger: ACTACAAGATGGAGAATGGCAGCGAGTACCGCACGC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATAAGCCTTCAGGAGCGTaGGGTACTCGCTGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDKPSGA*GTRCHS Trigger: AGAATGGCAGCGAGTACCGCACGCTCCTGAAGGCTT...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATCTACTGAGGACTCAATaGCCGTGTCCCGCACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDLLRTQ*PCPALG Trigger: ACCAAGTGCGGGACACGGCCATTGAGTCCTCAGTAG...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| 3UTR CAA 72 bp | TATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTaGGAAATGGATGGATGCTTGGGACCCAGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: YGCNLSYHFLYP*EMDGCLGPREA Trigger: TGCTTCCCTGGGTCCCAAGCATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGAGATAATCAGCAGCTaGACGGCTCGGTTGATGATC | + |
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Preference number: 4 (lower is better) Translates to: VGSMDVTLATIFSILWKWEIISS*TARLMI Trigger: GATCATCAACCGAGCCGTTCAGCTGCTGATTATCTC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | AGGATTATTTTAAGGGTGCAAAGAGATAATGTGTATGGGAGTCCCTGGTATGTGAGCTTGGCAAAATCCTaGCCAGCAAACTTAACCACG | + |
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Preference number: 4 (lower is better) Translates to: RIILRVQRDNVYGSPWYVSLAKS*PANLTT Trigger: CGTGGTTAAGTTTGCTGGGCAGGATTTTGCCAAGCT...CACATACCAGGGACTCCCATACACATTATCTCTTTGCACCCTTAAAATAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGGGGCCTTTTCAGGATaGAAGCGGCACTTCTTTATG | + |
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Preference number: 4 (lower is better) Translates to: VGSMDVTLATIFSILWKWGAFSG*KRHFFM Trigger: CATAAAGAAGTGCCGCTTCCATCCTGAAAAGGCCCC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAAATCCGACACATCCATaGCTCTGTTGGCATAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGNPTHP*LCWHSV Trigger: GACGCTATGCCAACAGAGTCATGGATGTGTCGGATT...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | CTGGTATGTGGTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTAGCCAGGGGAAACACTaGTTTTCTCAGAAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LVCGRFYGCNLSYHFLYPSQGKH*FSQKLH Trigger: ATGGAGTTTCTGAGAAAAGCAGTGTTTCCCCTGGCT...AGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTACCACATACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATTATTTGGGAATGCACTaGTCCCAGGCCTTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDYLGMH*SQALSR Trigger: TCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATA...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATTTCCCTTCTCAAAGTTaGAGAGAGGGAAACGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDFPSQS*REGNGC Trigger: GCATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAA...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAAGGAATATTTGGGAATaGACTGGTCCCAGGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGRNIWE*TGPRPC Trigger: ACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCT...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAAGTATTTGGCAAACCTaGAGTTGTAGCCAGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGSIWQT*SCSQGK Trigger: TTTCCCCTGGCTACAACTTCAGGTTTGCCAAATACT...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR TCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATAGTATTTGGCAAACCTaGAGTTGTAGCCAGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDSIWQT*SCSQGK Trigger: TTTCCCCTGGCTACAACTTCAGGTTTGCCAAATACT...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR GCA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAAGCCAGGGGAAACACTaGTTTTCTCAGAAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGSQGKH*FSQKLH Trigger: ATGGAGTTTCTGAGAAAAGCAGTGTTTCCCCTGGCT...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGCTTCTCCTCATTCTCTaGACAGAATCCTTGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGSMDVTLATIFSILWKWLLLIL*TESLHL Trigger: CAAATGCAAGGATTCTGTCCAGAGAATGAGGAGAAG...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CCA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATCTTCTCCTCATTCTCTaGACAGAATCCTTGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMDVTLATIFSILWKWMDLLLIL*TESLHL Trigger: CAAATGCAAGGATTCTGTCCAGAGAATGAGGAGAAG...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGCCCGTGCGGGCCAGCTaGGCAAAATCCTGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARGKGKIQVLAGSTACLLPVRAS*AKSCPA Trigger: TGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGGG...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCCCGTGCGGGCCAGCTaGGCAAAATCCTGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGPVRAS*AKSCPA Trigger: TGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGGG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGGCCGTGTCCCGCACTaGGTAGGCCTTCTCGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGGRVPH*VGLLVQ Trigger: TTGCACGAGAAGGCCTACCAAGTGCGGGACACGGCC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGCACTGGTCCCAGGCCTaGTCCAGATCACACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGKGKIQVLAGSTACLLHWSQA*SRSHTQ Trigger: CTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTG...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCACTGGTCCCAGGCCTaGTCCAGATCACACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGHWSQA*SRSHTQ Trigger: CTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS TCA 90 bp | CCCCCGAGTCTGTGGACTGCTTCTCTACAGTGGCCTGGTCACTGGTaGACACTGGGTTGGTTGAAGCAGTACCCTTCAGTGTTGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSLWTASLQWPGHW*TLGWLKQYPSVLSQ Trigger: CTGAGACAACACTGAAGGGTACTGCTTCAACCAACCCAGTGTTCACCAGTGACCAGGCCACTGTAGAGAAGCAGTCCACAGACTCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS TCA 90 bp | GACTCTGTTGGCATAGCGTCCGAAGCCTTTTACCTTTGTTACTACTaGGGACTCAATGGCCGTGTCCCGCACTTGGTAGGCCTTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSVGIASEAFYLCYY*GLNGRVPHLVGLLV Trigger: CACGAGAAGGCCTACCAAGTGCGGGACACGGCCATTGAGTCCTCAGTAGTAACAAAGGTAAAAGGCTTCGGACGCTATGCCAACAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCGAGTGAAGGAATATTaGGGAATGCACTGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGRVKEY*GMHWSQ Trigger: CTGGGACCAGTGCATTCCCAAATATTCCTTCACTCG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGCGAGTGAAGGAATATTaGGGAATGCACTGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGKGKIQVLAGSTACLLRVKEY*GMHWSQ Trigger: CTGGGACCAGTGCATTCCCAAATATTCCTTCACTCG...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGGAATGATGTTGAACTaGCCAGCGTTCCCGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGGMMLN*PAFPYT Trigger: GGTATACGGGAACGCTGGCAAGTTCAACATCATTCC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGGCCCCTTTGAGGAAATaGAGCAGGATGATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGAPLRK*SRMMSQ Trigger: CTGTGACATCATCCTGCTCAATTTCCTCAAAGGGGC...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGCAGTACCCTTCAGTGTaGTCTCAGTCACCTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ARGKGKIQVLAGSTACLLQYPSV*SQSPPQ Trigger: TTGAGGAGGTGACTGAGACAACACTGAAGGGTACTG...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCAGTACCCTTCAGTGTaGTCTCAGTCACCTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGQYPSV*SQSPPQ Trigger: TTGAGGAGGTGACTGAGACAACACTGAAGGGTACTG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS TCA 90 bp | CTGCTTCTCTACAGTGGCCTGGTCACTGGTGAACACTGGGTTGGTTaGAGCAGTACCCTTCAGTGTTGTCTCAGTCACCTCCTCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLYSGLVTGEHWVG*SSTLQCCLSHLLKL Trigger: AAGTTTGAGGAGGTGACTGAGACAACACTGAAGGGTACTGCTTCAACCAACCCAGTGTTCACCAGTGACCAGGCCACTGTAGAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTGCCTGTCTGCTGTTTCCCTTCTCAAAGTaGAAGAGAGGGAAACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARGKGKIQVLAGSTACLLFPFSK*KRGKRM Trigger: CATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAAA...CAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGTTTCCCTTCTCAAAGTaGAAGAGAGGGAAACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGFPFSK*KRGKRM Trigger: CATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAAA...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS CCA 90 bp | TCAGAAACTCCATCTAGCCGAGTGAAGGAATATTTGGGAATGCACTaGTCCCAGGCCTTGTCCAGATCACACACCCAGCCGATCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SETPSSRVKEYLGMH*SQALSRSHTQPILM Trigger: CATTAAGATCGGCTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCTTCACTCGGCTAGATGGAGTTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCACTGCCTGTCTGCTGAACAGTGAGGGTCTAGATACCTGGTCTTTGGGGCGAAGCCTTTTACCTTaGTTACTACTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTACLLNSEGLDTWSLGRSLLP*LLLRTQ Trigger: TTGAGTCCTCAGTAGTAACAAAGGTAAAAGGCTTCG...CCCCAAAGACCAGGTATCTAGACCCTCACTGTTCAGCAGACAGGCAGTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS-3UTR CAA 90 bp | GATGGGAGGCATGCAAGGGGTAAAGGCAAGATTCAGGTCTTAGCGGGAAGCACTTTTCCCTTCTCAAAGTaGAAGAGAGGGAAACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DGRHARGKGKIQVLAGSTFPFSK*KRGKRM Trigger: CATCCGTTTCCCTCTCTTCAACTTTGAGAAGGGAAA...AGTGCTTCCCGCTAAGACCTGAATCTTGCCTTTACCCCTTGCATGCCTCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGGCCGTGTCCCGCACTaGGTAGGCCTTCTCGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VGSMDVTLATIFSILWKWGRVPH*VGLLVQ Trigger: TTGCACGAGAAGGCCTACCAAGTGCGGGACACGGCC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATCCCGTGCGGGCCAGCTaGGCAAAATCCTGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SMDVTLATIFSILWKWMDPVRAS*AKSCPA Trigger: TGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGGG...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | AGGATTATTTTAAGGGTGCAAAGAGATAATGTGTATGGGAGTCCCTGGTATGTGCACTGGTCCCAGGCCTaGTCCAGATCACACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIILRVQRDNVYGSPWYVHWSQA*SRSHTQ Trigger: CTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTG...CACATACCAGGGACTCCCATACACATTATCTCTTTGCACCCTTAAAATAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAGGCCGTGTCCCGCACTaGGTAGGCCTTCTCGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGGRVPH*VGLLVQ Trigger: TTGCACGAGAAGGCCTACCAAGTGCGGGACACGGCC...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | CTGGTATGTGGTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTGCCCCTTTGAGGAAATaGAGCAGGATGATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVCGRFYGCNLSYHFLYPAPLRK*SRMMSQ Trigger: CTGTGACATCATCCTGCTCAATTTCCTCAAAGGGGC...AGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTACCACATACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | AGGATTATTTTAAGGGTGCAAAGAGATAATGTGTATGGGAGTCCCTGGTATGTGCAGTACCCTTCAGTGTaGTCTCAGTCACCTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RIILRVQRDNVYGSPWYVQYPSV*SQSPPQ Trigger: TTGAGGAGGTGACTGAGACAACACTGAAGGGTACTG...CACATACCAGGGACTCCCATACACATTATCTCTTTGCACCCTTAAAATAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | GTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGGGAATGATGTTGAACTaGCCAGCGTTCCCGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: VGSMDVTLATIFSILWKWGMMLN*PAFPYT Trigger: GGTATACGGGAACGCTGGCAAGTTCAACATCATTCC...CCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGAGGAATGATGTTGAACTaGCCAGCGTTCCCGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: FYGCNLSYHFLYPLEMDGGMMLN*PAFPYT Trigger: GGTATACGGGAACGCTGGCAAGTTCAACATCATTCC...TCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS-3UTR CAA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATGCCCCTTTGAGGAAATaGAGCAGGATGATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SMDVTLATIFSILWKWMDAPLRK*SRMMSQ Trigger: CTGTGACATCATCCTGCTCAATTTCCTCAAAGGGGC...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
||
| CDS-3UTR CAA 90 bp | TCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTTGGAAATGGATGGATCGAAGCCTTTTACCTTaGTTACTACTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMDVTLATIFSILWKWMDRSLLP*LLLRTQ Trigger: TTGAGTCCTCAGTAGTAACAAAGGTAAAAGGCTTCG...ATCCATCCATTTCCAAAGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTATGTGGTAGGTTCTATGGATGTAACCTTAGCTACCATTTTCTCTATCCTTCAGTAACGATCATTTaGGTGATGATGACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVCGRFYGCNLSYHFLYPSVTII*VMMTKT Trigger: TGTCTTTGTCATCATCACCAAAATGATCGTTACTGA...AGGATAGAGAAAATGGTAGCTAAGGTTACATCCATAGAACCTACCACATACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 |
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| CDS GCA 72 bp | AGAACTCCACCCGTGCGGGCCAGCTTGGCAAAATCCTaGCCAGCAAACTTAACCACGTCCCCTACCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RTPPVRASLAKS*PANLTTSPTLK Trigger: CTTGAGGGTAGGGGACGTGGTTAAGTTTGCTGGGCAGGATTTTGCCAAGCTGGCCCGCACGGGTGGAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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| CDS CCA 72 bp | GCCCCCGAGTCTGTGGACTGCTTCTCTACAGTGGCCTaGTCACTGGTGAACACTGGGTTGGTTGAAGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: APESVDCFSTVA*SLVNTGLVEAV Trigger: TACTGCTTCAACCAACCCAGTGTTCACCAGTGACCAGGCCACTGTAGAGAAGCAGTCCACAGACTCGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS TCA 72 bp | GGCATAGCGTCCGAAGCCTTTTACCTTTGTTACTACTaGGGACTCAATGGCCGTGTCCCGCACTTGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GIASEAFYLCYY*GLNGRVPHLVG Trigger: GCCTACCAAGTGCGGGACACGGCCATTGAGTCCTCAGTAGTAACAAAGGTAAAAGGCTTCGGACGCTATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS CAA 90 bp | GTGGACTGCTTCTCTACAGTGGCCTGGTCACTGGTGAACACTGGGTaGGTTGAAGCAGTACCCTTCAGTGTTGTCTCAGTCACCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VDCFSTVAWSLVNTG*VEAVPFSVVSVTSS Trigger: TGAGGAGGTGACTGAGACAACACTGAAGGGTACTGCTTCAACCAACCCAGTGTTCACCAGTGACCAGGCCACTGTAGAGAAGCAGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS CAA 90 bp | TCTAGCCGAGTGAAGGAATATTTGGGAATGCACTGGTCCCAGGCCTaGTCCAGATCACACACCCAGCCGATCTTAATGCCCAGAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRVKEYLGMHWSQA*SRSHTQPILMPRTP Trigger: TGGAGTTCTGGGCATTAAGATCGGCTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCTTCACTCGGCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS CAA 90 bp | ACACTGCTTTTCTCAGAAACTCCATCTAGCCGAGTGAAGGAATATTaGGGAATGCACTGGTCCCAGGCCTTGTCCAGATCACACACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLFSETPSSRVKEY*GMHWSQALSRSHTQ Trigger: CTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCTTCACTCGGCTAGATGGAGTTTCTGAGAAAAGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS CAA 72 bp | TTCTCAGAAACTCCATCTAGCCGAGTGAAGGAATATTaGGGAATGCACTGGTCCCAGGCCTTGTCCAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: FSETPSSRVKEY*GMHWSQALSRS Trigger: TGATCTGGACAAGGCCTGGGACCAGTGCATTCCCAAATATTCCTTCACTCGGCTAGATGGAGTTTCTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
||
| CDS TCA 72 bp | AAACACTGCTTTTCTCAGAAACTCCATCTAGCCGAGTaGAGGAATATTTGGGAATGCACTGGTCCCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KHCFSQKLHLAE*RNIWECTGPRP Trigger: AGGCCTGGGACCAGTGCATTCCCAAATATTCCTTCACTCGGCTAGATGGAGTTTCTGAGAAAAGCAGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028465.14 ENSMUST00000111613.8 ENSMUST00000111616.3 |
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