Pregenerated sensors for P2RX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020787Ensembl transcript IDs: ENSMUST00000021141.14, ENSMUST00000092938.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTCTCACCCCTTGCCTCCTCAGCCCTCATGTTCCAGCCAAGCTaGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CVSPLASSALMFQPS*AGRGSWDWATGKEP Trigger: TGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | TATGGAGACCGTGTGTCCCTGCCTGGGAGTGTAGGTGTGTTCAGATaGCTGTGCCTGCAGCACCCAAGCTGTTCCAACCCACAGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: YGDRVSLPGSVGVFR*LCLQHPSCSNPQRG Trigger: CCCCCTCTGTGGGTTGGAACAGCTTGGGTGCTGCAGGCACAGCCATCTGAACACACCTACACTCCCAGGCAGGGACACACGGTCTCCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | GCCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGAAGCTGGGACTaGGCCACAGGCAAGGAGCCAAGATTCATCAGGGTTACTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: ALMFQPSWAGRGSWD*ATGKEPRFIRVTSP Trigger: TGGAGAAGTAACCCTGATGAATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 90 bp | ACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCTCTGGCAATaGCCTCTGCCCTGGCTCAAAGCCACCAGCCCTTGCTGGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TRGQLVSALQESLWQ*PLPWLKATSPCWKP Trigger: TGGCTTCCAGCAAGGGCTGGTGGCTTTGAGCCAGGGCAGAGGTCATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 90 bp | CCCTGTGTGGCACGAGAACAACACTACACACTTGCTGTGGGTGTTTaGGACCCTGCTCAGTGCCTGCACCTGCCAGTTGGGGCTGACCCA | + |
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Preference number: 1 (lower is better) Translates to: PCVAREQHYTLAVGV*DPAQCLHLPVGADP Trigger: TGGGTCAGCCCCAACTGGCAGGTGCAGGCACTGAGCAGGGTCTCAAACACCCACAGCAAGTGTGTAGTGTTGTTCTCGTGCCACACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR GCA 90 bp | GGCAACTGGTATCTGCCTTGCAGGAAAGCCTCTGGCAATGACCTCTaGCCTGGCTCAAAGCCACCAGCCCTTGCTGGAAGCCACACACTG | + |
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Preference number: 1 (lower is better) Translates to: GNWYLPCRKASGNDL*PGSKPPALAGSHTL Trigger: CAGTGTGTGGCTTCCAGCAAGGGCTGGTGGCTTTGAGCCAGGGCAGAGGTCATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 90 bp | GGGTGTTTGAGACCCTGCTCAGTGCCTGCACCTGCCAGTTGGGGCTaGCCCAAGGCTGATTGGGAGCTTAAGAGTCAGAAAGCTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: GCLRPCSVPAPASWG*PKADWELKSQKALG Trigger: TCCTAGAGCTTTCTGACTCTTAAGCTCCCAATCAGCCTTGGGTCAGCCCCAACTGGCAGGTGCAGGCACTGAGCAGGGTCTCAAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | GGGCCATCCCTCAGGAAGGGAAGTGTGGATCTGGACCCAGAGCTCTaGATTCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGC | + |
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Preference number: 1 (lower is better) Translates to: GPSLRKGSVDLDPEL*IPMSWLNQRATGIC Trigger: GCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAGCTCTGGGTCCAGATCCACACTTCCCTTCCTGAGGGATGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | TTTGTGATCCCTGTGTGGCACGAGAACAACACTACACACTTGCTGTaGGTGTTTGAGACCCTGCTCAGTGCCTGCACCTGCCAGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: FVIPVWHENNTTHLL*VFETLLSACTCQLG Trigger: CCCCAACTGGCAGGTGCAGGCACTGAGCAGGGTCTCAAACACCCACAGCAAGTGTGTAGTGTTGTTCTCGTGCCACACAGGGATCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR GCA 90 bp | CTCTGGATTCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTaGCTTGCAGGAAAGCCTCTGGCAATGACCTCTGCCCTGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: LWIPMSWLNQRATGI*LAGKPLAMTSALAQ Trigger: TTGAGCCAGGGCAGAGGTCATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | AAGGGAAGTGTGGATCTGGACCCAGAGCTCTGGATTCCAATGTCTTaGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KGSVDLDPELWIPMS*LNQRATGICLAGKP Trigger: AGGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAGCTCTGGGTCCAGATCCACACTTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 90 bp | GTATGTGTAGAGGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTaGCACGAGAACAACACTACACACTTGCTGTGGGTGTTTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: VCVEGVCTWGFVIPV*HENNTTHLLWVFET Trigger: GGTCTCAAACACCCACAGCAAGTGTGTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCCTCTACACATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | CTCACCCCTTGCCTCCTCAGCCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGGCCACCAGCCCTTGCTaGAAGCCACACACTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LTPCLLSPHVPAKLGRPWATSPC*KPHTES Trigger: TGACTCAGTGTGTGGCTTCCAGCAAGGGCTGGTGGC...CCACGGCCTGCCCAGCTTGGCTGGAACATGAGGGCTGAGGAGGCAAGGGGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGTATTTTAGGAGGAGGTaGGGTGCGTATCAGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: PSCSSQAGQAVEAGTGPQYFRRR*GAYQAP Trigger: GGGTGCCTGATACGCACCCCACCTCCTCCTAAAATA...CTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGCTAGAAGGGCTGGTCTaGTATGACTCCCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSCSSQAGQAVEAGTGPQLEGLV*YDSLRK Trigger: CTTCCTGAGGGAGTCATACCAGACCAGCCCTTCTAG...CTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR GCA 90 bp | CAACCCACAGAGGGGGTGGAGGGTTGTATGTGTAGAGGGGGTGTGCACATGGGGAACTGGTATCTGCCTTaGAGGAAAGCCTCTGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: QPTEGVEGCMCRGGVHMGNWYLP*RKASGN Trigger: ATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTT...CCCCATGTGCACACCCCCTCTACACATACAACCCTCCACCCCCTCTGTGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTGGCACGAGAACAACACTACTCAGGAAGGGAAGTGTaGATCTGGACCCAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGVHMGVCDPCVAREQHYSGREV*IWTQSS Trigger: AGAGCTCTGGGTCCAGATCCACACTTCCCTTCCTGA...GTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CAA 90 bp | GAAGGGAAGTGTGGATCTGGACCCAGAGCTCTGGATTCCAATGTCTaGGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: EGKCGSGPRALDSNV*AEPEGNWYLPCRKA Trigger: GGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAGCTCTGGGTCCAGATCCACACTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGTGAGGAACCCAGCCAGAGGGACCCAGAATAGTGAAAAATTGAGGGGCAAAGCCACCAGCCCTTaGTGGAAGCCACACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: WCVRNPARGTQNSEKLRGKATSP*WKPHTE Trigger: CTCAGTGTGTGGCTTCCAGCAAGGGCTGGTGGCTTT...GCCCCTCAATTTTTCACTATTCTGGGTCCCTCTGGCTGGGTTCCTCACACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATAATGAAAACATCTGTTaGTATCCAGTATGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QAGQAVEAGTGPQARSQDNENIC*YPVWQS Trigger: TGACTGCCATACTGGATAGCAACAGATGTTTTCATT...ATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCAGCCAAGGGAAGTGTGGATCTaGACCCAGAGCTCTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: PVWQSQAKSVPITSSTQPREVWI*TQSSGF Trigger: GAATCCAGAGCTCTGGGTCCAGATCCACACTTCCCT...TGGCTGGGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CAA 90 bp | TTCTATTTTAGGAGGAGGTGGGGTGCGTATCAGGCACCCGCACTGTaGATGAGCCTCCCAGGGAATTCCTTTGGAACTTCCTACAATGAA | + |
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Preference number: 2 (lower is better) Translates to: FYFRRRWGAYQAPAL*MSLPGNSFGTSYNE Trigger: TTCATTGTAGGAAGTTCCAAAGGAATTCCCTGGGAGGCTCATCAACAGTGCGGGTGCCTGATACGCACCCCACCTCCTCCTAAAATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR GCA 90 bp | TCCTCATTCTTTTTATTGTGTCTCACCCCTTGCCTCCTCAGCCCTCATGTTCCATGTGTAGAGGGGGTGTaGACATGGGGGTTTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: SSFFLLCLTPCLLSPHVPCVEGV*TWGFVI Trigger: GATCACAAACCCCCATGTGCACACCCCCTCTACACA...TGGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACAATAAAAAGAATGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCAGCCATGGATTCCAATGTCTTaGCTGAACCAGAGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: PVWQSQAKSVPITSSTQPWIPMS*LNQRAT Trigger: AGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCA...TGGCTGGGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CAA 90 bp | CCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGCAACTGGTATCTGCCTaGCAGGAAAGCCTCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PSCSSQAGQAVEAGTGPQQLVSA*QESLWQ Trigger: TTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTG...CTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 72 bp | GACTCCCTCAGGAAGGAGAGCATCGCCCCATGGGGGTaGTACTGTATGGAGACCGTGTGTCCCTGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: DSLRKESIAPWG*YCMETVCPCLG Trigger: TCCCAGGCAGGGACACACGGTCTCCATACAGTATCACCCCCATGGGGCGATGCTCTCCTTCCTGAGGGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 72 bp | CGTGTGTCCCTGCCTGGGAGTGTAGGTGTGTTCAGATaGCTGTGCCTGCAGCACCCAAGCTGTTCCAACCCA | + |
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Preference number: 3 (lower is better) Translates to: RVSLPGSVGVFR*LCLQHPSCSNP Trigger: TGGGTTGGAACAGCTTGGGTGCTGCAGGCACAGCCATCTGAACACACCTACACTCCCAGGCAGGGACACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR GCA 72 bp | GTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTaGAGGAAAGCCTCTGGCAATGACCTCTGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VLAEPEGNWYLP*RKASGNDLCPG Trigger: GCCAGGGCAGAGGTCATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTGGGAGTGTAGGTGTGTTCAGATGGCTGTGCCTGCAGCACCCAAGCTGTCTGGATTCCAATGTCTaGGCTGAACCAGAGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LPGSVGVFRWLCLQHPSCLDSNV*AEPEGN Trigger: GTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAG...ACAGCTTGGGTGCTGCAGGCACAGCCATCTGAACACACCTACACTCCCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATTCATCCAGAATAGTGAAAAATaGAGGGGCCATCCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: WAGRGSWDWATGKEPRFIQNSEK*RGHPSG Trigger: TCCTGAGGGATGGCCCCTCAATTTTTCACTATTCTG...GATGAATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 72 bp | GCACGAGAACAACACTACACACTTGCTGTGGGTGTTTaGGACCCTGCTCAGTGCCTGCACCTGCCAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: AREQHYTLAVGV*DPAQCLHLPVG Trigger: CCCAACTGGCAGGTGCAGGCACTGAGCAGGGTCTCAAACACCCACAGCAAGTGTGTAGTGTTGTTCTCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 72 bp | GAGGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTaGCACGAGAACAACACTACACACTTGCTGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: EGVCTWGFVIPV*HENNTTHLLWV Trigger: CACCCACAGCAAGTGTGTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR GCA 72 bp | CCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTaGCTTGCAGGAAAGCCTCTGGCAATGACCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PMSWLNQRATGI*LAGKPLAMTSA Trigger: GGCAGAGGTCATTGCCAGAGGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 72 bp | GGAACCCAGCCAGAGGGACCCAGAATAGTGAAAAATTaGGGGGCCATCCCTCAGGAAGGGAAGTGTGGATCT | + |
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Preference number: 3 (lower is better) Translates to: GTQPEGPRIVKN*GAIPQEGKCGS Trigger: AGATCCACACTTCCCTTCCTGAGGGATGGCCCCTCAATTTTTCACTATTCTGGGTCCCTCTGGCTGGGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 72 bp | GTGGATCTGGACCCAGAGCTCTGGATTCCAATGTCTTaGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: VDLDPELWIPMS*LNQRATGICLA Trigger: TGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAGCTCTGGGTCCAGATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CCA 72 bp | CTACAAAGTGCCCTGTGTTTCTATTTTAGGAGGAGGTaGGGTGCGTATCAGGCACCCGCACTGTTGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: LQSALCFYFRRR*GAYQAPALLMS Trigger: GCTCATCAACAGTGCGGGTGCCTGATACGCACCCCACCTCCTCCTAAAATAGAAACACAGGGCACTTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR TCA 72 bp | GAGCCTCCCAGGGAATTCCTTTGGAACTTCCTACAATaGAAACATCTGTTGCTATCCAGTATGGCAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: EPPREFLWNFLQ*KHLLLSSMAVT Trigger: TGTGACTGCCATACTGGATAGCAACAGATGTTTTCATTGTAGGAAGTTCCAAAGGAATTCCCTGGGAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR GCA 72 bp | AATTCCTTTGGAACTTCCTACAATGAAAACATCTGTTaGTATCCAGTATGGCAGTCACAGGCCAAAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: NSFGTSYNENIC*YPVWQSQAKSV Trigger: GACACTTTTGGCCTGTGACTGCCATACTGGATAGCAACAGATGTTTTCATTGTAGGAAGTTCCAAAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR CCA 90 bp | CAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATCCAGAGTGGAGCTGGTaGCCGCGGGGTCACGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QAGQAVEAGTGPQARSQDPEWSW*PRGHVH Trigger: GTGAACGTGACCCCGCGGCCACCAGCTCCACTCTGG...ATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR GCA 90 bp | CTCACCCCTTGCCTCCTCAGCCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGCGGTTTGTCCCATTCTaGACAAAGTGCCTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LTPCLLSPHVPAKLGRPWRFVPF*TKCLAN Trigger: ATTTGCCAGGCACTTTGTGCAGAATGGGACAAACCG...CCACGGCCTGCCCAGCTTGGCTGGAACATGAGGGCTGAGGAGGCAAGGGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR GCA 90 bp | GTCCCTGCCTGGGAGTGTAGGTGTGTTCAGATGGCTGTGCCTGCAGCACCCAAGTGGCCACTCCAAAGATaGCAATCCCAGAGCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: VPAWECRCVQMAVPAAPKWPLQR*QSQSRW Trigger: CCATCGGCTCTGGGATTGGCATCTTTGGAGTGGCCA...CTTGGGTGCTGCAGGCACAGCCATCTGAACACACCTACACTCCCAGGCAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR CCA 90 bp | TCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCCCCAGGCCCTGGAGCTaGGTCACAGCCAAGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SNVLAEPEGNWYLPCRKAPRPWS*VTAKPL Trigger: CAAGGGCTTGGCTGTGACCCAGCTCCAGGGCCTGGG...GGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR TCA 90 bp | GGCTGTGCCTGCAGCACCCAAGCTGTTCCAACCCACAGAGGGGGTGGAGGGTTGGCTGATAAGGCCACTTaGGGTCTGGTATCCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GCACSTQAVPTHRGGGGLADKAT*GLVSFF Trigger: GAAAAAGGATACCAGACCTCAAGTGGCCTTATCAGC...CAACCCTCCACCCCCTCTGTGGGTTGGAACAGCTTGGGTGCTGCAGGCACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR TCA 90 bp | CAACCCACAGAGGGGGTGGAGGGTTGTATGTGTAGAGGGGGTGTGCACATGGGGTCACAGCCAAGCCCTTaGGTTTCACTGACACACTGC | + |
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Preference number: 4 (lower is better) Translates to: QPTEGVEGCMCRGGVHMGSQPSP*VSLTHC Trigger: GCAGTGTGTCAGTGAAACTCAAGGGCTTGGCTGTGA...CCCCATGTGCACACCCCCTCTACACATACAACCCTCCACCCCCTCTGTGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR TCA 90 bp | GTAGACAGTGGCAGCCTGAGCCATAAGCACGAAGCTAGGGTACTGGTGTGTGAGACTCCCAGTCGATGGTaGTACCAACCACCCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VDSGSLSHKHEARVLVCETPSRW*YQPPRP Trigger: AGGGCGGGGTGGTTGGTATCACCATCGACTGGGAGT...CTCACACACCAGTACCCTAGCTTCGTGCTTATGGCTCAGGCTGCCACTGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR TCA 90 bp | CCCTCATGTTCCAGCCAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGTGTCCTCCGCATACTTaGACTTCTTCTGCTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PSCSSQAGQAVEAGTGPQCPPHT*TSSACS Trigger: ACTACAAGCAGAAGAAGTTCAAGTATGCGGAGGACA...CTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTGGCTGGAACATGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| 3UTR CAA 72 bp | AGGAGGAGGTGGGGTGCGTATCAGGCACCCGCACTGTaGATGAGCCTCCCAGGGAATTCCTTTGGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRRWGAYQAPAL*MSLPGNSFGTS Trigger: GGAAGTTCCAAAGGAATTCCCTGGGAGGCTCATCAACAGTGCGGGTGCCTGATACGCACCCCACCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS-3UTR GCA 90 bp | CAACCCACAGAGGGGGTGGAGGGTTGTATGTGTAGAGGGGGTGTGCACATGGGGACCTTCTGGGTTCTCTaGACAATGTCCTTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPTEGVEGCMCRGGVHMGTFWVL*TMSLSL Trigger: CAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGT...CCCCATGTGCACACCCCCTCTACACATACAACCCTCCACCCCCTCTGTGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTGGCACGAGAACAACACTACGCCCTTGAGTTTCACTaGCACACTGCTGATAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGVHMGVCDPCVAREQHYALEFH*HTADKA Trigger: GGCCTTATCAGCAGTGTGTCAGTGAAACTCAAGGGC...GTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | GTAGACAGTGGCAGCCTGAGCCATAAGCACGAAGCTAGGGTACTGGTGTGTGAGTTGCAGTGCCGTACATaGCAGTCCAGGTCACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VDSGSLSHKHEARVLVCELQCRT*QSRSHS Trigger: GGAGTGTGACCTGGACTGGCATGTACGGCACTGCAA...CTCACACACCAGTACCCTAGCTTCGTGCTTATGGCTCAGGCTGCCACTGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCGTCCTCATGTTCTCCTaGAGGCCCAGAGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNVLAEPEGNWYLPCRKAVLMFS*RPRVEL Trigger: CAGCTCCACTCTGGGCCTGCAGGAGAACATGAGGAC...GGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCTGTGTTTCTATTTTAGGAGGAGGTGGGGTGCGTATCAGGCACCCGCATCTTCACAGTGCCATTaGAGGGCACACAGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SALCFYFRRRWGAYQAPASSQCH*RAHSCL Trigger: CAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGA...TGCGGGTGCCTGATACGCACCCCACCTCCTCCTAAAATAGAAACACAGGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | GCGTATCAGGCACCCGCACTGTTGATGAGCCTCCCAGGGAATTCCTTTGGAACTAAGTTCTCAGCCTCATaGAGAAGAGCAGGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYQAPALLMSLPGNSFGTKFSAS*RRAGLG Trigger: CCCAAGCCCTGCTCTTCTTCATGAGGCTGAGAACTT...AGTTCCAAAGGAATTCCCTGGGAGGCTCATCAACAGTGCGGGTGCCTGATACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTGGCACGAGAACAACACTACGAATCCCAAACACCTTaGAGAGGTGACGACGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGVHMGVCDPCVAREQHYESQTP*RGDDGL Trigger: CAAACCGTCGTCACCTCTTCAAGGTGTTTGGGATTC...GTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | GTAGACAGTGGCAGCCTGAGCCATAAGCACGAAGCTAGGGTACTGGTGTGTGAGGCACACAGTTGCCTGTaGGAATACCTTGGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VDSGSLSHKHEARVLVCEAHSCL*EYLGLS Trigger: GGAAAGCCCAAGGTATTCGCACAGGCAACTGTGTGC...CTCACACACCAGTACCCTAGCTTCGTGCTTATGGCTCAGGCTGCCACTGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | CTGTTCCAACCCACAGAGGGGGTGGAGGGTTGTATGTGTAGAGGGGGTGTGCACGATCACAGAGAACTGTaGCCACTCCAAAGATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFQPTEGVEGCMCRGGVHDHREL*PLQRCQ Trigger: TTGGCATCTTTGGAGTGGCCACAGTTCTCTGTGATC...GTGCACACCCCCTCTACACATACAACCCTCCACCCCCTCTGTGGGTTGGAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | TCCTCATTCTTTTTATTGTGTCTCACCCCTTGCCTCCTCAGCCCTCATGTTCCACCACATAGCCAAGGCTaGAGACTGGGCACAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFFLLCLTPCLLSPHVPPHSQG*RLGTAG Trigger: ACCCGCTGTGCCCAGTCTTCAGCCTTGGCTATGTGG...TGGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACAATAAAAAGAATGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | GCGTATCAGGCACCCGCACTGTTGATGAGCCTCCCAGGGAATTCCTTTGGAACTTCTGAAGTTGAAGCCTaGAGACAGGTTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AYQAPALLMSLPGNSFGTSEVEA*RQVLLP Trigger: GGGGAGAAGAACCTGTCTCCAGGCTTCAACTTCAGA...AGTTCCAAAGGAATTCCCTGGGAGGCTCATCAACAGTGCGGGTGCCTGATACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | GTCCTCATTCTTTTTATTGTGTCTCACCCCTTGCCTCCTCAGCCCTCATGTTCCGGAGCTGTCCCCATGTaGTGGGAAGACATAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLILFIVSHPLPPQPSCSGAVPM*WEDIVS Trigger: GCTGACTATGTCTTCCCAGCACATGGGGACAGCTCC...GGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACAATAAAAAGAATGAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTGGCACGAGAACAACACTACCAAACTTCCCAGCCTTaGCATCCACAAGGATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGVHMGVCDPCVAREQHYQTSQP*HPQGYQ Trigger: TTGATATCCTTGTGGATGGCAAGGCTGGGAAGTTTG...GTAGTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | AGCACGAAGCTAGGGTACTGGTGTGTGAGGAACCCAGCCAGAGGGACCCAGAATCCTGTGCGAATACCTTaGGCTTTCCTTTCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: STKLGYWCVRNPARGTQNPVRIP*AFLSAF Trigger: AAAAGCAGAAAGGAAAGCCCAAGGTATTCGCACAGG...ATTCTGGGTCCCTCTGGCTGGGTTCCTCACACACCAGTACCCTAGCTTCGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | TGGCTCAAAGCCACCAGCCCTTGCTGGAAGCCACACACTGAGTCAAGTCCGGAGGTTGACCTTGAAGCGTaGAAAGCTGATGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKATSPCWKPHTESSPEVDLEA*KADAVF Trigger: AAAAACAGCATCAGCTTTCCACGCTTCAAGGTCAAC...CTCCGGACTTGACTCAGTGTGTGGCTTCCAGCAAGGGCTGGTGGCTTTGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCTGTCATCTTGGCATATaGCACCTTCTGGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNVLAEPEGNWYLPCRKACHLGI*HLLGSL Trigger: CAGAGAACCCAGAAGGTGGCATATGCCAAGATGACA...GGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | TGCTATCCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCGCATATGCCACCTTCTaGGTTCTCTGCACAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYPVWQSQAKSVPITSSTAYATF*VLCTMS Trigger: GGACATTGTGCAGAGAACCCAGAAGGTGGCATATGC...GGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGGATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCAGCCATCTTTTCCTTTCTGCTTTTCCTaGAGTGCAGCCACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WQSQAKSVPITSSTQPSFPFCFS*SAATVI Trigger: GATGACAGTGGCTGCACTCCAGGAAAAGCAGAAAGG...AAAAGATGGCTGGGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR TCA 90 bp | TCCTCATTCTTTTTATTGTGTCTCACCCCTTGCCTCCTCAGCCCTCATGTTCCAGGATCAGACGGAAAATaGCTCCCACCTTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFFLLCLTPCLLSPHVPGSDGK*LPPSCF Trigger: GAAACAAGAAGGTGGGAGTCATTTTCCGTCTGATCC...TGGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACAATAAAAAGAATGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | AAACATCTGTTGCTATCCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTTGGGCTTTCCTTTCTaGTTTTCCTGGAGTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHLLLSSMAVTGQKCPHNLGFPF*FSWSAA Trigger: GGCTGCACTCCAGGAAAAGCAGAAAGGAAAGCCCAA...GTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGGATAGCAACAGATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | TGCTATCCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCATGGAACTGGTAGATaGGTTTGCAGTGCCGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CYPVWQSQAKSVPITSSTHGTGR*VCSAVH Trigger: ATGTACGGCACTGCAAACCCATCTACCAGTTCCATG...GGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGGATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR GCA 90 bp | TGCTATCCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCCATTCTGCACAAAGTaGCTGGCAAATCTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYPVWQSQAKSVPITSSTPFCTK*LANLKL Trigger: CAACTTCAGATTTGCCAGGCACTTTGTGCAGAATGG...GGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGGATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CCA 90 bp | TGCTATCCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCTCTTAGGCAGGATGTaGAGCAATAAGAGATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CYPVWQSQAKSVPITSSTLLGRM*SNKRSQ Trigger: CTGTGATCTCTTATTGCTCCACATCCTGCCTAAGAG...GGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGGATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATACCAGGTTGCGCCTGTaGACCTTGAAGCGTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAGQAVEAGTGPQARSQDTRLRL*TLKRGK Trigger: CTTTCCACGCTTCAAGGTCAACAGGCGCAACCTGGT...ATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATTCATCGCAGCCACTGTCATCTaGGCATATGCCACCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WAGRGSWDWATGKEPRFIAATVI*AYATFW Trigger: CCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGC...GATGAATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS TCA 90 bp | TGCAGTGCCGTACATGCCAGTCCAGGTCACACTCCCAGTCGATGGTaGTACCAACCACCCCGCCCTTCTCAGCAAGGCTTCGGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSAVHASPGHTPSRW*YQPPRPSQQGFGSP Trigger: AGGACTTCCGAAGCCTTGCTGAGAAGGGCGGGGTGGTTGGTATCACCATCGACTGGGAGTGTGACCTGGACTGGCATGTACGGCACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCAGGCCGTGGAAGCTGGGACTGGGCCACAGGCAAGGAGCCAAGATTCAGCCTGTGCGAATACCTaGGGCTTTCCTTTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGQAVEAGTGPQARSQDSACANT*GFPFCF Trigger: AAAGCAGAAAGGAAAGCCCAAGGTATTCGCACAGGC...TGAATCTTGGCTCCTTGCCTGTGGCCCAGTCCCAGCTTCCACGGCCTGCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCCTGCAGCACCCAAGCTGTTCCAACCCACAGAGGGGGTGGAGGGTTGCTGGCAAATCTGAAGTaGAAGCCTGGAGACAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GCACSTQAVPTHRGGGGLLANLK*KPGDRF Trigger: GAACCTGTCTCCAGGCTTCAACTTCAGATTTGCCAG...CAACCCTCCACCCCCTCTGTGGGTTGGAACAGCTTGGGTGCTGCAGGCACAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS TCA 90 bp | GGCTTCGGAAGTCCTGGCCCGACTCTCGCACCACATAGCCAAGGCTaGAGACTGGGCACAGCGGGTGTAGAATCTTGTGGTAGAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GFGSPGPTLAPHSQG*RLGTAGVESCGRGI Trigger: AATGCCTCTACCACAAGATTCTACACCCGCTGTGCCCAGTCTTCAGCCTTGGCTATGTGGTGCGAGAGTCGGGCCAGGACTTCCGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCAACCCACAGAGGGGGTGGAGGGTTGTATGTGTAGAGGGGGTGTGCACGTCTTCACAGTGCCATaGAAGGGCACACAGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFQPTEGVEGCMCRGGVHVFTVP*KGTQLP Trigger: AGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGAC...GTGCACACCCCCTCTACACATACAACCCTCCACCCCCTCTGTGGGTTGGAACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS GCA 90 bp | ACAGGTTCTTCTCCCCGTACAGTCCATGGAACTGGTAGATGGGTTTaGAGTGCCGTACATGCCAGTCCAGGTCACACTCCCAGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSSPRTVHGTGRWV*SAVHASPGHTPSRW Trigger: CCATCGACTGGGAGTGTGACCTGGACTGGCATGTACGGCACTGCAAACCCATCTACCAGTTCCATGGACTGTACGGGGAGAAGAACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS CCA 90 bp | CTGGAGACAGGTTCTTCTCCCCGTACAGTCCATGGAACTGGTAGATaGGTTTGCAGTGCCGTACATGCCAGTCCAGGTCACACTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LETGSSPRTVHGTGR*VCSAVHASPGHTPS Trigger: ACTGGGAGTGTGACCTGGACTGGCATGTACGGCACTGCAAACCCATCTACCAGTTCCATGGACTGTACGGGGAGAAGAACCTGTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGGTGTGCACATGGGGGTTTGTGATCCCTGTGTGGCACGAGAACAACACTTGCGCCTGTTGACCTaGAAGCGTGGAAAGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGGVHMGVCDPCVAREQHLRLLT*KRGKLM Trigger: CATCAGCTTTCCACGCTTCAAGGTCAACAGGCGCAA...GTGTTGTTCTCGTGCCACACAGGGATCACAAACCCCCATGTGCACACCCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | GAGCTCTGGATTCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTACCTCCTCCACCAGGTaGCGCCTGTTGACCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELWIPMSWLNQRATGICLTSSTR*RLLTLK Trigger: CTTCAAGGTCAACAGGCGCAACCTGGTGGAGGAGGT...AAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGAATCCAGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS GCA 90 bp | TCCTTTCTGCTTTTCCTGGAGTGCAGCCACTGTCATCTTGGCATATaGCACCTTCTGGGTTCTCTGCACAATGTCCTTGAGCCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLFLECSHCHLGI*HLLGSLHNVLEPAE Trigger: CTCAGCAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACTCCAGGAAAAGCAGAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS GCA 90 bp | TGCCTGTGCGAATACCTTGGGCTTTCCTTTCTGCTTTTCCTGGAGTaGAGCCACTGTCATCTTGGCATATGCCACCTTCTGGGTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLCEYLGLSFLLFLE*SHCHLGICHLLGSL Trigger: CAGAGAACCCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACTCCAGGAAAAGCAGAAAGGAAAGCCCAAGGTATTCGCACAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS CCA 90 bp | TTTTCCTGGAGTGCAGCCACTGTCATCTTGGCATATGCCACCTTCTaGGTTCTCTGCACAATGTCCTTGAGCCTGCTGAGGGGTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSWSAATVILAYATF*VLCTMSLSLLRGHD Trigger: ATCATGACCCCTCAGCAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACTCCAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS TCA 90 bp | CTACAGGACACCAGCCAAAGATCTCACACGTCTTCACAGTGCCATTaGAGGGCACACAGTTGCCTGTGCGAATACCTTGGGCTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQDTSQRSHTSSQCH*RAHSCLCEYLGLSF Trigger: AAAGGAAAGCCCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGAGATCTTTGGCTGGTGTCCTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS TCA 90 bp | CAGCCTTGCCATCCACAAGGATATCAAAGCGAATCCCAAACACCTTaGAGAGGTGACGACGGTTTGTCCCATTCTGCACAAAGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPCHPQGYQSESQTP*RGDDGLSHSAQSAW Trigger: CCAGGCACTTTGTGCAGAATGGGACAAACCGTCGTCACCTCTTCAAGGTGTTTGGGATTCGCTTTGATATCCTTGTGGATGGCAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS CCA 90 bp | ACAGTTGCCTGTGCGAATACCTTGGGCTTTCCTTTCTGCTTTTCCTaGAGTGCAGCCACTGTCATCTTGGCATATGCCACCTTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVACANTLGFPFCFS*SAATVILAYATFWV Trigger: AACCCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACTCCAGGAAAAGCAGAAAGGAAAGCCCAAGGTATTCGCACAGGCAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS-3UTR CAA 90 bp | CCAGTATGGCAGTCACAGGCCAAAAGTGTCCCCATAACTAGTTCAACCCAGCCAATGACTCCCACCTTCTaGTTTCGTACCAGCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: PVWQSQAKSVPITSSTQPMTPTF*FRTSTI Trigger: GATGGTGCTGGTACGAAACAAGAAGGTGGGAGTCAT...TGGCTGGGTTGAACTAGTTATGGGGACACTTTTGGCCTGTGACTGCCATACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | TCCAATGTCTTGGCTGAACCAGAGGGCAACTGGTATCTGCCTTGCAGGAAAGCCTCAAACTTCCCAGCCTaGCCATCCACAAGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SNVLAEPEGNWYLPCRKASNFPA*PSTRIS Trigger: TGATATCCTTGTGGATGGCAAGGCTGGGAAGTTTGA...GGCTTTCCTGCAAGGCAGATACCAGTTGCCCTCTGGTTCAGCCAAGACATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS-3UTR CAA 90 bp | GGAACTTCCTACAATGAAAACATCTGTTGCTATCCAGTATGGCAGTCACAGGCCGGGGTCATGATGAAATaGGTCATAACTACAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSYNENICCYPVWQSQAGVMMK*VITTKE Trigger: CTCCTTTGTAGTTATGACCAATTTCATCATGACCCC...GGCCTGTGACTGCCATACTGGATAGCAACAGATGTTTTCATTGTAGGAAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
||
| CDS CCA 72 bp | AGGTCCTCATGTTCTCCTGCAGGCCCAGAGTGGAGCTaGTGGCCGCGGGGTCACGTTCACCCTCCCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSCSPAGPEWS*WPRGHVHPPQA Trigger: GGCCTGGGGAGGGTGAACGTGACCCCGCGGCCACCAGCTCCACTCTGGGCCTGCAGGAGAACATGAGGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
||
| CDS TCA 72 bp | AGTCCTGGCCCGACTCTCGCACCACATAGCCAAGGCTaGAGACTGGGCACAGCGGGTGTAGAATCTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPGPTLAPHSQG*RLGTAGVESCG Trigger: ACCACAAGATTCTACACCCGCTGTGCCCAGTCTTCAGCCTTGGCTATGTGGTGCGAGAGTCGGGCCAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS TCA 72 bp | GTACATGCCAGTCCAGGTCACACTCCCAGTCGATGGTaGTACCAACCACCCCGCCCTTCTCAGCAAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VHASPGHTPSRW*YQPPRPSQQGF Trigger: GAAGCCTTGCTGAGAAGGGCGGGGTGGTTGGTATCACCATCGACTGGGAGTGTGACCTGGACTGGCATGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS GCA 72 bp | TCTCCCCGTACAGTCCATGGAACTGGTAGATGGGTTTaGAGTGCCGTACATGCCAGTCCAGGTCACACTCCC | + |
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Preference number: 6 (lower is better) Translates to: SPRTVHGTGRWV*SAVHASPGHTP Trigger: GGGAGTGTGACCTGGACTGGCATGTACGGCACTGCAAACCCATCTACCAGTTCCATGGACTGTACGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CCA 72 bp | ATTGGTCATAACTACAAAGGAGCTGTCCCCATGTGCTaGGAAGACATAGTCAGCCACGTCCCAGACCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IGHNYKGAVPMC*EDIVSHVPDLG Trigger: CCCCAGGTCTGGGACGTGGCTGACTATGTCTTCCCAGCACATGGGGACAGCTCCTTTGTAGTTATGACCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CCA 72 bp | AGTGCAGCCACTGTCATCTTGGCATATGCCACCTTCTaGGTTCTCTGCACAATGTCCTTGAGCCTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAATVILAYATF*VLCTMSLSLLR Trigger: CCTCAGCAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS TCA 72 bp | ACCAGCCAAAGATCTCACACGTCTTCACAGTGCCATTaGAGGGCACACAGTTGCCTGTGCGAATACCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TSQRSHTSSQCH*RAHSCLCEYLG Trigger: CCCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGAGATCTTTGGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 72 bp | CACCAGCCAAAGATCTCACACGTCTTCACAGTGCCATaGAAGGGCACACAGTTGCCTGTGCGAATACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HQPKISHVFTVP*KGTQLPVRIPW Trigger: CCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGAGATCTTTGGCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 90 bp | TCTACAGGACACCAGCCAAAGATCTCACACGTCTTCACAGTGCCATaGAAGGGCACACAGTTGCCTGTGCGAATACCTTGGGCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: STGHQPKISHVFTVP*KGTQLPVRIPWAFL Trigger: AAGGAAAGCCCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGAGATCTTTGGCTGGTGTCCTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS TCA 72 bp | CGTAGACCAGAACCACCAACTGGATCAGACGGAAAATaGCTCCCACCTTCTTGTTTCGTACCAGCACCATCC | + |
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Preference number: 6 (lower is better) Translates to: RRPEPPTGSDGK*LPPSCFVPAPS Trigger: GGATGGTGCTGGTACGAAACAAGAAGGTGGGAGTCATTTTCCGTCTGATCCAGTTGGTGGTTCTGGTCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS GCA 72 bp | ACTGTCATCTTGGCATATGCCACCTTCTGGGTTCTCTaGACAATGTCCTTGAGCCTGCTGAGGGGTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: TVILAYATFWVL*TMSLSLLRGHD Trigger: ATCATGACCCCTCAGCAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGTGGCATATGCCAAGATGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CCA 72 bp | CTCCTCCACCAGGTTGCGCCTGTTGACCTTGAAGCGTaGAAAGCTGATGCTGTTTTTGATGAAGAGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLHQVAPVDLEA*KADAVFDEEGE Trigger: TTCACCCTCTTCATCAAAAACAGCATCAGCTTTCCACGCTTCAAGGTCAACAGGCGCAACCTGGTGGAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021141.14 |
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| CDS CCA 72 bp | CTGCACAAAGTGCCTGGCAAATCTGAAGTTGAAGCCTaGAGACAGGTTCTTCTCCCCGTACAGTCCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LHKVPGKSEVEA*RQVLLPVQSME Trigger: TTCCATGGACTGTACGGGGAGAAGAACCTGTCTCCAGGCTTCAACTTCAGATTTGCCAGGCACTTTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 72 bp | ACCAACTGGATCAGACGGAAAATGACTCCCACCTTCTaGTTTCGTACCAGCACCATCCGGGGAGTGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: TNWIRRKMTPTF*FRTSTIRGVSY Trigger: GTATGACACTCCCCGGATGGTGCTGGTACGAAACAAGAAGGTGGGAGTCATTTTCCGTCTGATCCAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 72 bp | TCACACGTCTTCACAGTGCCATTGAAGGGCACACAGTaGCCTGTGCGAATACCTTGGGCTTTCCTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SHVFTVPLKGTQ*PVRIPWAFLSA Trigger: AGCAGAAAGGAAAGCCCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 90 bp | ACCAGAACCACCAACTGGATCAGACGGAAAATGACTCCCACCTTCTaGTTTCGTACCAGCACCATCCGGGGAGTGTCATACTCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TRTTNWIRRKMTPTF*FRTSTIRGVSYSKK Trigger: CTTCTTTGAGTATGACACTCCCCGGATGGTGCTGGTACGAAACAAGAAGGTGGGAGTCATTTTCCGTCTGATCCAGTTGGTGGTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 90 bp | CCAAAGATCTCACACGTCTTCACAGTGCCATTGAAGGGCACACAGTaGCCTGTGCGAATACCTTGGGCTTTCCTTTCTGCTTTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PKISHVFTVPLKGTQ*PVRIPWAFLSAFPG Trigger: TCCAGGAAAAGCAGAAAGGAAAGCCCAAGGTATTCGCACAGGCAACTGTGTGCCCTTCAATGGCACTGTGAAGACGTGTGAGATCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS GCA 72 bp | GAATACCTTGGGCTTTCCTTTCTGCTTTTCCTGGAGTaGAGCCACTGTCATCTTGGCATATGCCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: EYLGLSFLLFLE*SHCHLGICHLL Trigger: CAGAAGGTGGCATATGCCAAGATGACAGTGGCTGCACTCCAGGAAAAGCAGAAAGGAAAGCCCAAGGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS CAA 90 bp | GTCATCTTGGCATATGCCACCTTCTGGGTTCTCTGCACAATGTCCTaGAGCCTGCTGAGGGGTCATGATGAAATTGGTCATAACTACAAA | + |
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Preference number: 6 (lower is better) Translates to: VILAYATFWVLCTMS*SLLRGHDEIGHNYK Trigger: TTTGTAGTTATGACCAATTTCATCATGACCCCTCAGCAGGCTCAAGGACATTGTGCAGAGAACCCAGAAGGTGGCATATGCCAAGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS TCA 72 bp | TCTGGTATCCTTTTTCATAGACAAACACCCACCCAATaGCGTAGACCAGAACCACCAACTGGATCAGACGGA | + |
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Preference number: 6 (lower is better) Translates to: SGILFHRQTPTQ*RRPEPPTGSDG Trigger: TCCGTCTGATCCAGTTGGTGGTTCTGGTCTACGTCATTGGGTGGGTGTTTGTCTATGAAAAAGGATACCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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| CDS TCA 72 bp | CATCCACAAGGATATCAAAGCGAATCCCAAACACCTTaGAGAGGTGACGACGGTTTGTCCCATTCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: HPQGYQSESQTP*RGDDGLSHSAQ Trigger: TTGTGCAGAATGGGACAAACCGTCGTCACCTCTTCAAGGTGTTTGGGATTCGCTTTGATATCCTTGTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021141.14 ENSMUST00000092938.5 |
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