Pregenerated sensors for OXSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036737Ensembl transcript IDs: ENSMUST00000040853.11, ENSMUST00000128880.8, ENSMUST00000143728.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGAGAGTCTTCCATCCTGGGCCTTGAGGCACACTGGCCGCTTCTaGTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACC | + |
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Preference number: 1 (lower is better) Translates to: VESLPSWALRHTGRF*FSDGGRGDMSSVST Trigger: GGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR CCA 90 bp | GCTCCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTaGTTCATTCACCATCACTGCATAAGCCAGCAGAGGGAAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: APWLPAVPPQQFSTD*FIHHHCISQQREVT Trigger: GGTGACTTCCCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | GCAGCTGCTCTATCCACTGGGACCATCACTGTAGTAAGGCAAGAATaGGTTGAGAGTCTTCCATCCTGGGCCTTGAGGCACACTGGCCGC | + |
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Preference number: 1 (lower is better) Translates to: AAALSTGTITVVRQE*VESLPSWALRHTGR Trigger: GCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTCAACTCATTCTTGCCTTACTACAGTGATGGTCCCAGTGGATAGAGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR TCA 90 bp | TTCGGCTCCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTaGCTGGTTCATTCACCATCACTGCATAAGCCAGCAGAGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: FGSLAPSCPTSAVFH*LVHSPSLHKPAEGS Trigger: ACTTCCCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGGAGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | ACGGCACGTGTGGTTTCGTGTTCCATCCTGGGTCAGTTTAGTGAATaGAGACCCCCTCCACAGAGTCAGTGCAAGAGAGGAGCAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: TARVVSCSILGQFSE*RPPPQSQCKRGAEG Trigger: GCCTTCTGCTCCTCTCTTGCACTGACTCTGTGGAGGGGGTCTTCATTCACTAAACTGACCCAGGATGGAACACGAAACCACACGTGCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | TGCTCTATCCACTGGGACCATCACTGTAGTAAGGCAAGAATGAGTTaGGAGTCTTCCATCCTGGGCCTTGAGGCACACTGGCCGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CSIHWDHHCSKARMS*ESSILGLEAHWPLL Trigger: CAGAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTCAACTCATTCTTGCCTTACTACAGTGATGGTCCCAGTGGATAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR TCA 90 bp | GCCAACAGAAGCAACAGACATGTGCATGTGTGGCATCTCCTAGGCTaGCTCTTCCAGGTCTGTGGTTTAGCTGATGCTGAGCTGGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: ANRSNRHVHVWHLLG*LFQVCGLADAELGK Trigger: TTTGCCCAGCTCAGCATCAGCTAAACCACAGACCTGGAAGAGTCAGCCTAGGAGATGCCACACATGCACATGTCTGTTGCTTCTGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR GCA 90 bp | ACTGGATTCTACAGCAAGACACGAGTCTTCTGCAAAGGTAACGCTTaGTGCCTGCTTCCCAAACCTCAACCCCACCTCCCATCCTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: TGFYSKTRVFCKGNA*CLLPKPQPHLPSLL Trigger: AAGCAAGGATGGGAGGTGGGGTTGAGGTTTGGGAAGCAGGCAGCAAGCGTTACCTTTGCAGAAGACTCGTGTCTTGCTGTAGAATCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR GCA 90 bp | CATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTATATCCTTaGTCTCGCCTTCAGATTACTCAGCAGTCTCAGCTGGCTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: HPANILEGLTSLVYP*SRLQITQQSQLALG Trigger: TCCTAGAGCCAGCTGAGACTGCTGAGTAATCTGAAGGCGAGAGCAAGGATATACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | CAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTGGAGTCTaGCAACAGTCAGATGTTTCGCACCAGCTGAAGTTAAGGCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: QTIQSCTLQEQMAGV*QQSDVSHQLKLRLA Trigger: TGCTAGCCTTAACTTCAGCTGGTGCGAAACATCTGACTGTTGTCAGACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | AGCTCAGAACTGGATAATGAGTCTTTTACTCGGGGAGACCTCAGCTaGGAAATGGCAGCTCTCCCTTCCTCGCTCTCCTCATCAAACTCA | + |
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Preference number: 1 (lower is better) Translates to: SSELDNESFTRGDLS*EMAALPSSLSSSNS Trigger: TGAGTTTGATGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCGAGTAAAAGACTCATTATCCAGTTCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR CCA 90 bp | TTCTGCACAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTaGAGTCTGACAACAGTCAGATGTTTCGCACCAGCTGAAGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: FCTNNPKLHAAGADG*SLTTVRCFAPAEVK Trigger: CTTAACTTCAGCTGGTGCGAAACATCTGACTGTTGTCAGACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTGTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR CCA 90 bp | AACTGGATAATGAGTCTTTTACTCGGGGAGACCTCAGCTGAGAAATaGCAGCTCTCCCTTCCTCGCTCTCCTCATCAAACTCATCGTCAC | + |
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Preference number: 1 (lower is better) Translates to: NWIMSLLLGETSAEK*QLSLPRSPHQTHRH Trigger: GTGACGATGAGTTTGATGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCGAGTAAAAGACTCATTATCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR GCA 90 bp | TACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTaGACAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: YLWQDKIYQPSLAVF*TNNPKLHAAGADGW Trigger: CCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTGTGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR CCA 90 bp | GTAGATGAGCAGAAATCTGTTCTGGAACTTGAAGCAAAGTCCCCATaGGCTCAGCTGCCGCGAAGAGCTCAGAACTGGATAATGAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: VDEQKSVLELEAKSP*AQLPRRAQNWIMSL Trigger: AAGACTCATTATCCAGTTCTGAGCTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGATTTCTGCTCATCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR TCA 90 bp | CGAGCCTTCAACACCAGATGCCAGTTTGAAAGTGACAGATCGGTTTaGCTGAGGTTCTTCCACAATCTTCTGCAGATTGGCTGCCACTAT | + |
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Preference number: 1 (lower is better) Translates to: RAFNTRCQFESDRSV*LRFFHNLLQIGCHY Trigger: ATAGTGGCAGCCAATCTGCAGAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACTTTCAAACTGGCATCTGGTGTTGAAGGCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR TCA 90 bp | CCCTTTATTGCTGTAAAAATCTCAGCCGGGTACACCATTTCCACATaGCTAAGGCCAGGCAAGTCCATCTTCACAGGAGGATCAAAGATC | + |
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Preference number: 1 (lower is better) Translates to: PFIAVKISAGYTIST*LRPGKSIFTGGSKI Trigger: GATCTTTGATCCTCCTGTGAAGATGGACTTGCCTGGCCTTAGTCATGTGGAAATGGTGTACCCGGCTGAGATTTTTACAGCAATAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | CTTTCCCAACATGCCTTTGCACTCAACAGTACAAAAGTCCATGACTaGAACTACAGGCTCAGCATGAACGAAACAAGAGGTGGCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LSQHAFALNSTKVHD*NYRLSMNETRGGTG Trigger: ACCTGTGCCACCTCTTGTTTCGTTCATGCTGAGCCTGTAGTTTCAGTCATGGACTTTTGTACTGTTGAGTGCAAAGGCATGTTGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | CCTTCAACACCAGATGCCAGTTTGAAAGTGACAGATCGGTTTGACTaGGGTTCTTCCACAATCTTCTGCAGATTGGCTGCCACTATTACT | + |
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Preference number: 1 (lower is better) Translates to: PSTPDASLKVTDRFD*GSSTIFCRLAATIT Trigger: AGTAATAGTGGCAGCCAATCTGCAGAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACTTTCAAACTGGCATCTGGTGTTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR GCA 90 bp | ATGAAGAGGACAGACAAGAGTTTAGGCTGCCTCCATTCGAGGCTGTaGTTTTTCCTAACAAAGGTTGCTAGAATTCACATCAGGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: MKRTDKSLGCLHSRL*FFLTKVARIHIRYK Trigger: TTTGTACCTGATGTGAATTCTAGCAACCTTTGTTAGGAAAAAGCACAGCCTCGAATGGAGGCAGCCTAAACTCTTGTCTGTCCTCTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR TCA 90 bp | CTAGGGGCTCACAGCCCATCTTTGTGTGTCTCTTTAAGGCCAGACTaGCTATTCCATTCTTATATAAAATTTGGTAACGACAGGCTTATT | + |
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Preference number: 1 (lower is better) Translates to: LGAHSPSLCVSLRPD*LFHSYIKFGNDRLI Trigger: AATAAGCCTGTCGTTACCAAATTTTATATAAGAATGGAATAGTCAGTCTGGCCTTAAAGAGACACACAAAGATGGGCTGTGAGCCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR CAA 90 bp | AGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATGAGGTaGCCCAGTGCAGCTGCTCTATCCACTGGGACCATCACTGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: RCSCPSRCGRAGKMR*PSAAALSTGTITVV Trigger: TACTACAGTGATGGTCCCAGTGGATAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTCTCTGTCATGTCCCAGCAGGTaGGGGAGAGCAGGCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LRWRERGHEQRIYQRNSLSCPSR*GRAGKM Trigger: CATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGA...CAGAGAGTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACGAGAGTCTTCCATCCTaGGCCTTGAGGCACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: LLLRWRERGHEQRIYQRNESLPS*ALRHTG Trigger: GCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTC...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTCTCTGGAAGCAAAGTCCCCATaGGCTCAGCTGCCGCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LRWRERGHEQRIYQRNSLEAKSP*AQLPRR Trigger: TCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTC...CAGAGAGTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAGGTGCGGGAGAGCAGGCAAGATGAGGTTGCCCAGTGCAGCTGCTCTAACAGATCGGTTTGACTaGGGTTCTTCCACAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSRCGRAGKMRLPSAAALTDRFD*GSSTIF Trigger: GAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGT...TAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACCACACTGGCCGCTTCTaGTTCTCAGATGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLRWRERGHEQRIYQRNHTGRF*FSDGGR Trigger: TCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTG...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAGGTGCGGGAGAGCAGGCAAGATGAGGTTGCCCAGTGCAGCTGCTCTAACACCTTTCCCAACATaGCTTTGCACTCAACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: PSRCGRAGKMRLPSAAALTPFPT*LCTQQY Trigger: GTACTGTTGAGTGCAAAGGCATGTTGGGAAAGGTGT...TAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCTTTTACCAACCTGCTGGGACCTTGAACTCTCTAGTCTCCCAACTCCCTCCTACGGTTTGCTCTaGGTGAGGTGGGGTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLLPTCWDLELSSLPTPSYGLL*VRWGEG Trigger: ACCCTCACCCCACCTCACCCAGAGCAAACCGTAGGA...GGGAGTTGGGAGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCTTTTACCAACCTGCTGGGACCTTGAACTCTCTAGTCTCCCAACTCCCGGGGAGGCTGGCCACTaGCGATCCAACTTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LLLLPTCWDLELSSLPTPGEAGH*RSNFSF Trigger: GAAAGAAAAGTTGGATCGTCAGTGGCCAGCCTCCCC...GGGAGTTGGGAGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR CCA 90 bp | GGTCTAGAGAATGTGAACAGGAGATGGGCTGTGCTTACTTCCAGCCTGGCACTGAGGTCACGGCACGTGTaGTTTCGTGTTCCATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLENVNRRWAVLTSSLALRSRHV*FRVPSW Trigger: CCAGGATGGAACACGAAACCACACGTGCCGTGACCT...CAGTGCCAGGCTGGAAGTAAGCACAGCCCATCTCCTGTTCACATTCTCTAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR CAA 90 bp | CCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTATATCCTaGCTCTCGCCTTCAGATTACTCAGCAGTCTCAGCTGGCTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PSSKHSRGADLAGIS*LSPSDYSAVSAGSR Trigger: CCTAGAGCCAGCTGAGACTGCTGAGTAATCTGAAGGCGAGAGCAAGGATATACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR GCA 90 bp | GCCGGGGACTCTGCGGACCTTTTTAGATCTTTCAGAAATGGTAGGTGCTCTCTGCACACTGGCCGCTTCTaGTTCTCAGATGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: AGDSADLFRSFRNGRCSLHTGRF*FSDGGR Trigger: TCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTG...CAGAGAGCACCTACCATTTCTGAAAGATCTAAAAAGGTCCGCAGAGTCCCCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATAAGGCAAGAATGAGTTaGGAGTCTTCCATCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: KRYPKMLMSQQVRESRQDKARMS*ESSILG Trigger: GCCCAGGATGGAAGACTCTCAACTCATTCTTGCCTT...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTCTCTGACGGAAGAGACACCATaGAGAGGACAGACAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LRWRERGHEQRIYQRNSLTEETP*RGQTRV Trigger: AACTCTTGTCTGTCCTCTTCATGGTGTCTCTTCCGT...CAGAGAGTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR GCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATAGCTGGGAGGTTTGTTaGTGGGTTCTTTGGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: KRYPKMLMSQQVRESRQDSWEVC*WVLWQL Trigger: CAACTGCCAAAGAACCCAGCAACAAACCTCCCAGCT...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR-3UTR CCA 90 bp | TACTTGAGTGTTAAAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGAGTCTTCCATCCTaGGCCTTGAGGCACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: YLSVKEISQDAHVPAGAGESLPS*ALRHTG Trigger: GCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTC...TCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTTAACACTCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| 3UTR CAA 90 bp | CCTCCTAACTTGGTAGGCTCCTCCTTTTACCAACCTGCTGGGACCTaGAACTCTCTAGTCTCCCAACTCCCCTCTCAAATCCATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPNLVGSSFYQPAGT*NSLVSQLPSQIHLL Trigger: GAGAAGATGGATTTGAGAGGGGAGTTGGGAGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAGCCTACCAAGTTAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | ATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGAGGGAGAGGGGACATaGGCAGCGTATCTACCAACG | + |
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Preference number: 2 (lower is better) Translates to: IFYIFHHPANILEGLTSLEGEGT*AAYLPT Trigger: CGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTC...CAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGGTAATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTACTGCTTCGGCTCCCTaGCTCCCAGCTGTCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GEGNILHLPPSSKHSRGATASAP*LPAVPP Trigger: AGGTGGGACAGCTGGGAGCCAGGGAGCCGAAGCAGT...AGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATATTACCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCTAGGAGCAGTCCTACGGTTTGGTCAGTTTAGTGAATaGAGACCCCCTCCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVFQEKSTELLLGAVLRFGQFSE*RPPPQS Trigger: ACTCTGTGGAGGGGGTCTTCATTCACTAAACTGACC...AAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTGGTTCATTCACTTCCCAACATGCCTTTaGACTCAACAGTACAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PWLPAVPPQQFSTDWFIHFPTCL*TQQYKS Trigger: ACTTTTGTACTGTTGAGTGCAAAGGCATGTTGGGAA...GTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGCACAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTGGAGTCACTAAAGCTCCAAGCTaGGAGGTTTGTTGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: FSAQTIQSCTLQEQMAGVTKAPS*EVCCWV Trigger: AACCCAGCAACAAACCTCCCAGCTTGGAGCTTTAGT...GACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTGTGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCATTCCATCCTGGGCCTTaGGGCACACTGGCCGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KTTSGKIRFISHRLLFSAFHPGP*GTLAAS Trigger: AGAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAA...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTGCACAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTGGAGTCTCTCTGGGCTCCAGCTaGACAATCAACTTTAATTGC | + |
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Preference number: 2 (lower is better) Translates to: FSAQTIQSCTLQEQMAGVSLGSS*TINFNC Trigger: GCAATTAAAGTTGATTGTTCAGCTGGAGCCCAGAGA...GACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTGTGCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGAGAAATGGCAGCTCTCCCTTCCTCGCTCTCCTCATCAAACTCATCGTGCTTTCACATCTCTGTaGATCTGCCCATTCTTATGC | + |
|
Preference number: 2 (lower is better) Translates to: SAEKWQLSLPRSPHQTHRAFTSL*ICPFLC Trigger: GCATAAGAATGGGCAGATTCACAGAGATGTGAAAGC...ACGATGAGTTTGATGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTAGAGATATCCCAAGATaGTCATGTCCCAGCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ILHLPPSSKHSRGADLAGRDIPR*SCPSRC Trigger: GCACCTGCTGGGACATGAGCATCTTGGGATATCTCT...ACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR TCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGCAGATGGCTGGAGTCTaGCAACAGTCAGATGTTTCG | + |
|
Preference number: 2 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLQMAGV*QQSDVS Trigger: CGAAACATCTGACTGTTGTCAGACTCCAGCCATCTG...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCAGGAGCAGTGAGGGGGTaGCTGAGAACAGCTCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTTSGKIRFISHRLLFSAGAVRG*LRTAQQ Trigger: TTGCTGAGCTGTTCTCAGGCACCCCCTCACTGCTCC...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGCAAACAATCCAAAGCTaGACGCTGCAGGAGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLQTIQS*TLQEQM Trigger: CATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTG...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | GGAGAAGGTAATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTCCCACCTCCCATCCTTaGTTCCTCATAGCCCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: GEGNILHLPPSSKHSRGAPTSHP*FLIALP Trigger: AGGTAGGGCTATGAGGAAGCAAGGATGGGAGGTGGG...AGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATATTACCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTCTTCTGCTTCTCAGATaGAGGGAGAGGGGACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LEMRKAFRCVPREVNRAALLLLR*RERGHE Trigger: CTCATGTCCCCTCTCCCTCCATCTGAGAAGCAGAAG...AGCAGCTCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTCTTTTACCAACCTGCTaGGACCTTGAACTCTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILHLPPSSKHSRGADLAGLLPTC*DLELSS Trigger: ACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAG...ACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR TCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGGTAGTAAGGCAAGAATaGGTTGAGAGTCTTCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLVVRQE*VESLPS Trigger: GGATGGAAGACTCTCAACTCATTCTTGCCTTACTAC...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGTCCATCTTCACAGGAGGATCAAAGATCAGTTTTTCTTCAGCTTAATTTTTCATGTCCCAGCAGGTaGGGGAGAGCAGGCAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ASPSSQEDQRSVFLQLNFSCPSR*GRAGKM Trigger: CATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGA...AAAATTAAGCTGAAGAAAAACTGATCTTTGATCCTCCTGTGAAGATGGACTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATCTTATGTTCCCCCTTTaGCACAATGTGTTTAATAAT | + |
|
Preference number: 2 (lower is better) Translates to: KRYPKMLMSQQVRESRQDLMFPL*HNVFNN Trigger: ATTATTAAACACATTGTGGCAAAGGGGGAACATAAG...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR CAA 90 bp | TGTTCAAAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTaGCTGTTTTCTGCACAAACAATCCAAAGCTGCACGCTGCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CSKTTSGKIRFISHR*LFSAQTIQSCTLQE Trigger: CTCCTGCAGCGTGCAGCTTTGGATTGTTTGTGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTTTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR TCA 90 bp | GACTGGTTCATTCACCATCACTGCATAAGCCAGCAGAGGGAAGTCACCACACATAAAAGCCAACCTCACTaGTTATTCCCATATTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: DWFIHHHCISQQREVTTHKSQPH*LFPYCI Trigger: AATGCAATATGGGAATAATCAGTGAGGTTGGCTTTT...ATGTGTGGTGACTTCCCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR GCA 90 bp | CACAGGTTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGAGAGTCCCCTTTATTaGTGTAAAAATCTCAGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: HRLEMRKAFRCVPREVNRESPLY*CKNLSR Trigger: CCGGCTGAGATTTTTACAGCAATAAAGGGGACTCTC...TCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAACCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCTAGGAGCAGTCCTACGGTTTTTCGTTTGTTTGGTTTaGTTTTTGATACAGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GVFQEKSTELLLGAVLRFFVCLV*FLIQGF Trigger: GAAGCCCTGTATCAAAAACCAAACCAAACAAACGAA...AAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR TCA 90 bp | ATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTTTGGTTTGGTTTTTaGTACAGGGCTTCTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: IFYIFHHPANILEGLTSLVWFGF*YRASLY Trigger: ATACAGAGAAGCCCTGTATCAAAAACCAAACCAAAC...CAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCATCAAACCAACAATaGCAGGTGCAAGGAATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LEMRKAFRCVPREVNRAASSNQQ*QVQGIL Trigger: TAGAATTCCTTGCACCTGCCATTGTTGGTTTGATGA...AGCAGCTCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CCA 90 bp | ATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGTTATCTTGGCTATATTaGCACATACTATCTTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: IFYIFHHPANILEGLTSLLSWLY*HILSCA Trigger: AGCACAAGATAGTATGTGCCAATATAGCCAAGATAA...CAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | GCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATaGGGTTGCCCAGTGCAGCTGCTCTATCCACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AHVPAGAGEQAR*GCPVQLLYPLG Trigger: TCCCAGTGGATAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR GCA 72 bp | CTTCCATCCTGGGCCTTGAGGCACACTGGCCGCTTCTaGTTCTCAGATGGAGGGAGAGGGGACATGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSWALRHTGRF*FSDGGRGDMSS Trigger: GCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR GCA 72 bp | CAGGTGCGGGAGAGCAGGCAAGATGAGGTTGCCCAGTaGAGCTGCTCTATCCACTGGGACCATCACTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: QVRESRQDEVAQ*SCSIHWDHHCS Trigger: ACTACAGTGATGGTCCCAGTGGATAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR CCA 72 bp | GGCCTTGAGGCACACTGGCCGCTTCTGCTTCTCAGATaGAGGGAGAGGGGACATGAGCAGCGTATCTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GLEAHWPLLLLR*RERGHEQRIYQ Trigger: TTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTGCCTCAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR GCA 72 bp | CGGGAGAGCAGGCAAGATGAGGTTGCCCAGTGCAGCTaGTCTATCCACTGGGACCATCACTGTAGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RESRQDEVAQCS*SIHWDHHCSKA Trigger: TGCCTTACTACAGTGATGGTCCCAGTGGATAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR TCA 72 bp | GGCAAGAATGAGTTGAGAGTCTTCCATCCTGGGCCTTaGGGCACACTGGCCGCTTCTGCTTCTCAGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKNELRVFHPGP*GTLAASASQME Trigger: CTCCATCTGAGAAGCAGAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTCAACTCATTCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCAGGTGCGGGAGAGCAGGCAAGATGAGGTTGCCCAGTGCAGCTGCTCTAGCAAATCCTATCAGTTaGCCATCATCAGGAATATCC | + |
|
Preference number: 3 (lower is better) Translates to: PSRCGRAGKMRLPSAAALANPIS*PSSGIS Trigger: GGATATTCCTGATGATGGCAAACTGATAGGATTTGC...TAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR TCA 72 bp | CTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTaGCTGGTTCATTCACCATCACTGCATAAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LAPSCPTSAVFH*LVHSPSLHKPA Trigger: TGCTGGCTTATGCAGTGATGGTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR CCA 72 bp | CTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTaGTTCATTCACCATCACTGCATAAGCCAGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPAVPPQQFSTD*FIHHHCISQQR Trigger: CCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | CACTGGGACCATCACTGTAGTAAGGCAAGAATGAGTTaGGAGTCTTCCATCCTGGGCCTTGAGGCACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HWDHHCSKARMS*ESSILGLEAHW Trigger: CCAGTGTGCCTCAAGGCCCAGGATGGAAGACTCTCAACTCATTCTTGCCTTACTACAGTGATGGTCCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR TCA 72 bp | CTGGATAATGAGTCTTTTACTCGGGGAGACCTCAGCTaGGAAATGGCAGCTCTCCCTTCCTCGCTCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LDNESFTRGDLS*EMAALPSSLSS Trigger: TGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCGAGTAAAAGACTCATTATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR CCA 72 bp | AACAATCCAAAGCTGCACGCTGCAGGAGCAGATGGCTaGAGTCTGACAACAGTCAGATGTTTCGCACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NNPKLHAAGADG*SLTTVRCFAPA Trigger: AGCTGGTGCGAAACATCTGACTGTTGTCAGACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR CCA 72 bp | CACAAACAATCCAAAGCTGCACGCTGCAGGAGCAGATaGCTGGAGTCTGACAACAGTCAGATGTTTCGCACC | + |
|
Preference number: 3 (lower is better) Translates to: HKQSKAARCRSR*LESDNSQMFRT Trigger: GGTGCGAAACATCTGACTGTTGTCAGACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR CCA 72 bp | AAAGGTGATGACGGTCTAGAGAATGTGAACAGGAGATaGGCTGTGCTTACTTCCAGCCTGGCACTGGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: KGDDGLENVNRR*AVLTSSLALDH Trigger: GTGGTCCAGTGCCAGGCTGGAAGTAAGCACAGCCCATCTCCTGTTCACATTCTCTAGACCGTCATCACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTAGAGAATGTGAACAGGAGATGGGCTGTGCTTACTTCCAGCCTGGCACTGTTGTTGCTGGGTTCTTaGGCAGTTGTAGGTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLENVNRRWAVLTSSLALLLLGS*AVVGSG Trigger: GCCTGAACCTACAACTGCCAAAGAACCCAGCAACAA...CAGTGCCAGGCTGGAAGTAAGCACAGCCCATCTCCTGTTCACATTCTCTAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGTTCTGGAACTTGAAGCAAAGTCCCCATGGGCTCAGCTGCCGCGAAGAGTTGTTGCTGGGTTCTTaGGCAGTTGTAGGTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLFWNLKQSPHGLSCREELLLGS*AVVGSG Trigger: GCCTGAACCTACAACTGCCAAAGAACCCAGCAACAA...CTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGGTAATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTCTTCCATCCTGGGCCTaGAGGCACACTGGCCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GEGNILHLPPSSKHSRGALPSWA*RHTGRF Trigger: GAAGCGGCCAGTGTGCCTCAAGGCCCAGGATGGAAG...AGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATATTACCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | CTATCCACTGGGACCATCACTGTAGTAAGGCAAGAATaGGTTGAGAGTCTTCCATCCTGGGCCTTGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSTGTITVVRQE*VESLPSWALRH Trigger: GTGCCTCAAGGCCCAGGATGGAAGACTCTCAACTCATTCTTGCCTTACTACAGTGATGGTCCCAGTGGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| 3UTR TCA 72 bp | AGCAACAGACATGTGCATGTGTGGCATCTCCTAGGCTaGCTCTTCCAGGTCTGTGGTTTAGCTGATGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SNRHVHVWHLLG*LFQVCGLADAE Trigger: CTCAGCATCAGCTAAACCACAGACCTGGAAGAGTCAGCCTAGGAGATGCCACACATGCACATGTCTGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR CCA 72 bp | ATGAGTCTTTTACTCGGGGAGACCTCAGCTGAGAAATaGCAGCTCTCCCTTCCTCGCTCTCCTCATCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: MSLLLGETSAEK*QLSLPRSPHQT Trigger: AGTTTGATGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCGAGTAAAAGACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR CCA 72 bp | CAGAAATCTGTTCTGGAACTTGAAGCAAAGTCCCCATaGGCTCAGCTGCCGCGAAGAGCTCAGAACTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: QKSVLELEAKSP*AQLPRRAQNWI Trigger: TATCCAGTTCTGAGCTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGATTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCTAGGAGCAGTCCTACGGTTTAAGCTGGGAGGTTTGTaGCTGGGTTCTTTGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GVFQEKSTELLLGAVLRFKLGGL*LGSLAV Trigger: AACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTT...AAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | GCTGTAAAAATCTCAGCCGGGTACACCATTTCCACATaGCTAAGGCCAGGCAAGTCCATCTTCACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVKISAGYTIST*LRPGKSIFTGG Trigger: TCCTCCTGTGAAGATGGACTTGCCTGGCCTTAGTCATGTGGAAATGGTGTACCCGGCTGAGATTTTTACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | CCAGATGCCAGTTTGAAAGTGACAGATCGGTTTGACTaGGGTTCTTCCACAATCTTCTGCAGATTGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PDASLKVTDRFD*GSSTIFCRLAA Trigger: GGCAGCCAATCTGCAGAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACTTTCAAACTGGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR GCA 72 bp | AACCAAACTGGATTCTACAGCAAGACACGAGTCTTCTaGAAAGGTAACGCTTGCTGCCTGCTTCCCAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: NQTGFYSKTRVF*KGNACCLLPKP Trigger: AGGTTTGGGAAGCAGGCAGCAAGCGTTACCTTTGCAGAAGACTCGTGTCTTGCTGTAGAATCCAGTTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGCCCATTCTTATGCAGGTACTCCAGTCCTTCTAAGACTTCTCGGAGGATTAAGCTGGGAGGTTTGTaGCTGGGTTCTTTGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ICPFLCRYSSPSKTSRRIKLGGL*LGSLAV Trigger: AACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTT...AATCCTCCGAGAAGTCTTAGAAGGACTGGAGTACCTGCATAAGAATGGGCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCTTTTACCAACCTGCTGGGACCTTGAACTCTCTAGTCTCCCAACTCCCGTTCGTTTGTTTGGTTaGGTTTTTGATACAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLPTCWDLELSSLPTPVRLFG*VFDTGL Trigger: AAGCCCTGTATCAAAAACCAAACCAAACAAACGAAC...GGGAGTTGGGAGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCTAGGAGCAGTCCTACGGTTTTGTTTGGTTTGGTTTTaGATACAGGGCTTCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GVFQEKSTELLLGAVLRFCLVWF*IQGFSV Trigger: TACAGAGAAGCCCTGTATCAAAAACCAAACCAAACA...AAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | AACACCAGATGCCAGTTTGAAAGTGACAGATCGGTTTaGCTGAGGTTCTTCCACAATCTTCTGCAGATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NTRCQFESDRSV*LRFFHNLLQIG Trigger: GCCAATCTGCAGAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACTTTCAAACTGGCATCTGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| 3UTR TCA 72 bp | GTACAAAAGTCCATGACTGAAACTACAGGCTCAGCATaGACGAAACAAGAGGTGGCACAGGTTAGAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: VQKSMTETTGSA*TKQEVAQVRNE Trigger: CTCATTTCTAACCTGTGCCACCTCTTGTTTCGTTCATGCTGAGCCTGTAGTTTCAGTCATGGACTTTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR TCA 72 bp | CATGCCTTTGCACTCAACAGTACAAAAGTCCATGACTaGAACTACAGGCTCAGCATGAACGAAACAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HAFALNSTKVHD*NYRLSMNETRG Trigger: ACCTCTTGTTTCGTTCATGCTGAGCCTGTAGTTTCAGTCATGGACTTTTGTACTGTTGAGTGCAAAGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR GCA 72 bp | ACAGACAAGAGTTTAGGCTGCCTCCATTCGAGGCTGTaGTTTTTCCTAACAAAGGTTGCTAGAATTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: TDKSLGCLHSRL*FFLTKVARIHI Trigger: GATGTGAATTCTAGCAACCTTTGTTAGGAAAAAGCACAGCCTCGAATGGAGGCAGCCTAAACTCTTGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATCGTAGTCGTCCCTGTTaGTGGACCAGGGCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRYPKMLMSQQVRESRQDRSRPC*WTRAGR Trigger: GCGCCCTGCCCTGGTCCATCAACAGGGACGACTACG...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR TCA 90 bp | AATCTGTTCTGGAACTTGAAGCAAAGTCCCCATGGGCTCAGCTGCCGCGAAGAGCGTAGTCGTCCCTGTTaGTGGACCAGGGCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLFWNLKQSPHGLSCREERSRPC*WTRAGR Trigger: GCGCCCTGCCCTGGTCCATCAACAGGGACGACTACG...CTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTGGTTCATTCACCGGGGAGACCTCAGCTaGGAAATGGCAGCTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWLPAVPPQQFSTDWFIHRGDLS*EMAALP Trigger: AGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCG...GTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTGGTTCATTCACCTCCATAACTTCGGGTaGCATCCAGCACGGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWLPAVPPQQFSTDWFIHLHNFG*HPARGA Trigger: GGCACCCCGTGCTGGATGGCACCCGAAGTTATGGAG...GTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAGGTGCGGGAGAGCAGGCAAGATGAGGTTGCCCAGTGCAGCTGCTCTAGCAGAAATGAGCTCCTaGGAAACACCCTCTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSRCGRAGKMRLPSAAALAEMSS*ETPSAV Trigger: TACAGCAGAGGGTGTTTCTCAGGAGCTCATTTCTGC...TAGAGCAGCTGCACTGGGCAACCTCATCTTGCCTGCTCTCCCGCACCTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTCTCTGCCGTCCTCTGTCTTATaGAGACGGCCACTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRWRERGHEQRIYQRNSLPSSVL*RRPLEP Trigger: CGGCTCCAGTGGCCGTCTCCATAAGACAGAGGACGG...CAGAGAGTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTGGTTTTGCTGGCTCTaGAGGGGGCAGGAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRWRERGHEQRIYQRNWFCWL*RGQERD Trigger: GTCTCTCTCCTGCCCCCTGCAGAGCCAGCAAAACCA...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | GAGAGACTTGAGCTGGCTGTGTGGGCATCTGGCCAGCTGGCTGAGGTAGATGAGGACACAATGTTAGGATaGTGGCATTGGCTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLELAVWASGQLAEVDEDTMLG*WHWLMA Trigger: GGCCATGAGCCAATGCCATCATCCTAACATTGTGTC...CTCATCTACCTCAGCCAGCTGGCCAGATGCCCACACAGCCAGCTCAAGTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACACCTCAGCTGAGAAATaGCAGCTCTCCCTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRWRERGHEQRIYQRNTSAEK*QLSLPR Trigger: GCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGT...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATGAAGCAAAGTCCCCATaGGCTCAGCTGCCGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRYPKMLMSQQVRESRQDEAKSP*AQLPRR Trigger: TCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTC...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACAGACTGAGCCTGTGCTaGTTTTGCTGGCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRWRERGHEQRIYQRNRLSLC*FCWLCR Trigger: CCTGCAGAGCCAGCAAAACCAGCACAGGCTCAGTCT...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | CTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACTCTCTGCACTTAGCAGCTTCATaGCGAGCCACAGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRWRERGHEQRIYQRNSLHLAAS*RATAHP Trigger: AGGATGAGCTGTGGCTCGTCATGAAGCTGCTAAGTG...CAGAGAGTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTTTTACCAACCTGCTGGGACCTTGAACTCTCTAGTCTCCCAACTCCCTTGGACCACGGCAGTTaGTCCACTCCCTATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPTCWDLELSSLPTPLDHGS*STPYHL Trigger: GAGGTGATAGGGAGTGGAGCAACTGCCGTGGTCCAA...GGGAGTTGGGAGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGTTCATTCACCATCACTGCATAAGCCAGCAGAGGGAAGTCACCACACATCTTGAGCTGGCTGTGTaGGCATCTGGCCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DWFIHHHCISQQREVTTHLELAV*ASGQLA Trigger: AGCCAGCTGGCCAGATGCCCACACAGCCAGCTCAAG...ATGTGTGGTGACTTCCCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | AAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGATCACTTAGCAGCTTCATaGCGAGCCACAGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRYPKMLMSQQVRESRQDHLAAS*RATAHP Trigger: AGGATGAGCTGTGGCTCGTCATGAAGCTGCTAAGTG...ATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR TCA 90 bp | TACTTGAGTGTTAAAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGACTGGGACCGTTCTCCTaGAGACTGAGCCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVKEISQDAHVPAGAGLGPFS*RLSLCW Trigger: CCAGCACAGGCTCAGTCTTCAGGAGAACGGTCCCAG...TCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTTAACACTCAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTCAGATGGAGGGAGAGGGGACATGAGCAGCGTATCTACCAACGGAACCCACTCTCTCCTTTTTaGGGGCACAGTAAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRWRERGHEQRIYQRNPLSPF*GHSKLL Trigger: AAGCAGCTTACTGTGCCCCCAAAAAGGAGAGAGTGG...GTTCCGTTGGTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGAGGAGCTCATCCATGCTaGTCTGACACTTCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEISQDAHVPAGAGEQARGAHPC*SDTSPG Trigger: ACCTGGAGAAGTGTCAGACCAGCATGGATGAGCTCC...TCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGCTGGGAGGTTTGTTGCTGGGTTCTTTGGCAGTTGTAGGTTCAGGCCCAGGTTTATCCGCTTaGTCGCCACTCTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLGGLLLGSLAVVGSGPGLSA*SPLSPF Trigger: AAAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGG...GCCTGAACCTACAACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
||
| CDS-3UTR CCA 90 bp | ACAACAGTCAGATGTTTCGCACCAGCTGAAGTTAAGGCTAGCAACCCTTTCAAGCTGTGCTGGTTTTGCTaGCTCTGCAGGGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTVRCFAPAEVKASNPFKLCWFC*LCRGQE Trigger: CTCCTGCCCCCTGCAGAGCCAGCAAAACCAGCACAG...CTTGAAAGGGTTGCTAGCCTTAACTTCAGCTGGTGCGAAACATCTGACTGTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTTCTAGGAGCAGTCCTACGGTTTGACACAATGTTAGGATaGTGGCATTGGCTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVFQEKSTELLLGAVLRFDTMLG*WHWLMA Trigger: GGCCATGAGCCAATGCCATCATCCTAACATTGTGTC...AAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGAAGTGACAGATCGGTTTaGCTGAGGTTCTTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KEISQDAHVPAGAGEQARSDRSV*LRFFHN Trigger: ATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACT...TCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCAGGCAGGAGAGAGACTTaGGCTGGCTGTGTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KTTSGKIRFISHRLLFSAGRRET*AGCVGI Trigger: GATGCCCACACAGCCAGCTCAAGTCTCTCTCCTGCC...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTCGGGGAGACCTCAGCTaGGAAATGGCAGCTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSRGDLS*EMAALP Trigger: AGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCG...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGATCTGTTCTGGAACTTaGAGCAAAGTCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLICSGT*SKVPMG Trigger: GCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGAT...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | GAAACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTGGCAGGAGAGAGACTTaGGCTGGCTGTGTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ETPSAVSLPGVNSNRISFGRRET*AGCVGI Trigger: GATGCCCACACAGCCAGCTCAAGTCTCTCTCCTGCC...AAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTCTGGGACCGTTCTCCTaGAGACTGAGCCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNTLCCISPRSKFKSNIILGPFS*RLSLCW Trigger: CCAGCACAGGCTCAGTCTTCAGGAGAACGGTCCCAG...AATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR CCA 90 bp | GAAACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTCCGTCCTCTGTCTTATaGAGACGGCCACTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETPSAVSLPGVNSNRISFPSSVL*RRPLEP Trigger: CGGCTCCAGTGGCCGTCTCCATAAGACAGAGGACGG...AAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR CCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCAGAGAGAGACTTGAGCTaGCTGTGTGGGCATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTTSGKIRFISHRLLFSAERDLS*LCGHLA Trigger: GGCCAGATGCCCACACAGCCAGCTCAAGTCTCTCTC...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | AGAAACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTCTGTGCTGGTTTTGCTaGCTCTGCAGGGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNTLCCISPRSKFKSNIILCWFC*LCRGQE Trigger: CTCCTGCCCCCTGCAGAGCCAGCAAAACCAGCACAG...AATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGTTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGACCAGGTTTATCCGCTTaGTCGCCACTCTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRLEMRKAFRCVPREVNRPGLSA*SPLSPF Trigger: AAAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGG...TCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAACCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGTCATCCATGCTGGTCTaGCACTTCTCCAGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLSSMLV*HFSRFI Trigger: GATAAACCTGGAGAAGTGTCAGACCAGCATGGATGA...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR TCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCACCAGGCCAGCAGAAATaGGCTCCTGAGAAACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTTSGKIRFISHRLLFSAPGQQK*APEKHP Trigger: AGGGTGTTTCTCAGGAGCTCATTTCTGCTGGCCTGG...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR GCA 90 bp | ATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTTTTATGATAAGGAGCTaGCCCTGTGGCCAGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILHLPPSSKHSRGADLAGFMIRS*PCGQFN Trigger: ATTGAACTGGCCACAGGGGCAGCTCCTTATCATAAA...ACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTTGGTTTTGCTGGCTCTaGAGGGGGCAGGAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSWFCWL*RGQERD Trigger: GTCTCTCTCCTGCCCCCTGCAGAGCCAGCAAAACCA...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTGAGAGAGACTTGAGCTaGCTGTGTGGGCATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSERDLS*LCGHLA Trigger: GGCCAGATGCCCACACAGCCAGCTCAAGTCTCTCTC...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGGCTTTCACATCTCTGTaGATCTGCCCATTCTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLAFTSL*ICPFLC Trigger: GCATAAGAATGGGCAGATTCACAGAGATGTGAAAGC...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTTTGGACCACGGCAGTTaGTCCACTCCCTATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSLDHGS*STPYHL Trigger: GAGGTGATAGGGAGTGGAGCAACTGCCGTGGTCCAA...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGAGAATGTGAACAGGAGATGGGCTGTGCTTACTTCCAGCCTGGCACTGCTTATGTTCCCCCTTTaGCACAATGTGTTTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLENVNRRWAVLTSSLALLMFPL*HNVFNN Trigger: ATTATTAAACACATTGTGGCAAAGGGGGAACATAAG...CAGTGCCAGGCTGGAAGTAAGCACAGCCCATCTCCTGTTCACATTCTCTAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTACCTCAGCTGAGAAATaGCAGCTCTCCCTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSAVSLPGVNSNRISFSTSAEK*QLSLPR Trigger: GCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGT...ACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTAGACTGAGCCTGTGCTaGTTTTGCTGGCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSAVSLPGVNSNRISFSRLSLC*FCWLCR Trigger: CCTGCAGAGCCAGCAAAACCAGCACAGGCTCAGTCT...ACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTGGCTGTGTGGGCATCTaGCCAGCTCAGAACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSGCVGI*PAQNWI Trigger: TATCCAGTTCTGAGCTGGCCAGATGCCCACACAGCC...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTAGTTCTCGTTCTCCTGAAGACTaGGCCTGTGCTGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAVSLPGVNSNRISFSSRSPED*ACAGFA Trigger: AGCAAAACCAGCACAGGCTCAGTCTTCAGGAGAACG...AGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGCTGCTACAGATCGGTTTGACTaGGGTTCTTCCACAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMRKAFRCVPREVNRAATDRFD*GSSTIF Trigger: GAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGT...AGCAGCTCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
||
| 3UTR CAA 72 bp | ACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTaGCTGTTTTCTGCACAAACAATCCAAAGCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TTSGKIRFISHR*LFSAQTIQSCT Trigger: CGTGCAGCTTTGGATTGTTTGTGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR TCA 90 bp | GCAAGTCCATCTTCACAGGAGGATCAAAGATCAGTTTTTCTTCAGCTTAATTTTCGTTCTCCTGAAGACTaGGCCTGTGCTGGTTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ASPSSQEDQRSVFLQLNFRSPED*ACAGFA Trigger: AGCAAAACCAGCACAGGCTCAGTCTTCAGGAGAACG...AAAATTAAGCTGAAGAAAAACTGATCTTTGATCCTCCTGTGAAGATGGACTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR GCA 90 bp | TTCTATCAAAGGCAACTAACTAGTCCCTTTCTAGGGGCTCACAGCCCATCTTTGCAAATCCTATCAGTTTaGCATCATCAGGAATATCCG | + |
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Preference number: 4 (lower is better) Translates to: FYQRQLTSPFLGAHSPSLQILSV*HHQEYP Trigger: CGGATATTCCTGATGATGGCAAACTGATAGGATTTG...CAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CCA 90 bp | GCAAGTCCATCTTCACAGGAGGATCAAAGATCAGTTTTTCTTCAGCTTAATTTTGGAGCTCATCCATGCTaGTCTGACACTTCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ASPSSQEDQRSVFLQLNFGAHPC*SDTSPG Trigger: ACCTGGAGAAGTGTCAGACCAGCATGGATGAGCTCC...AAAATTAAGCTGAAGAAAAACTGATCTTTGATCCTCCTGTGAAGATGGACTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCACATTGGCTCATGGCCTaGATTTCTTTCAGGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KTTSGKIRFISHRLLFSAHWLMA*ISFRSS Trigger: TGAGCTCCTGAAAGAAATCCAGGCCATGAGCCAATG...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CCA 90 bp | GCAAGTCCATCTTCACAGGAGGATCAAAGATCAGTTTTTCTTCAGCTTAATTTTCCACTCTCTCCTTTTTaGGGGCACAGTAAGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASPSSQEDQRSVFLQLNFPLSPF*GHSKLL Trigger: AAGCAGCTTACTGTGCCCCCAAAAAGGAGAGAGTGG...AAAATTAAGCTGAAGAAAAACTGATCTTTGATCCTCCTGTGAAGATGGACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR GCA 90 bp | AAAACTACCTCTGGCAAGATAAGATTTATCAGCCATCGCTTGCTGTTTTCTGCATCTTCCACAATCTTCTaGAGATTGGCTGCCACTATT | + |
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Preference number: 4 (lower is better) Translates to: KTTSGKIRFISHRLLFSASSTIF*RLAATI Trigger: AATAGTGGCAGCCAATCTGCAGAAGATTGTGGAAGA...TGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGTAATATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTCAATCTTCTGCAGATTaGCTGCCACTATTACTAAAT | + |
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Preference number: 4 (lower is better) Translates to: GEGNILHLPPSSKHSRGAQSSAD*LPLLLN Trigger: ATTTAGTAATAGTGGCAGCCAATCTGCAGAAGATTG...AGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAATATTACCTTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS GCA 90 bp | TATCCGCTTGATCGCCACTCTCTCCTTTTTGGGGGCACAGTAAGCTaGTTGGACCACGGCAGTTGCTCCACTCCCTATCACCTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YPLDRHSLLFGGTVS*LDHGSCSTPYHLLQ Trigger: CTGCAGGAGGTGATAGGGAGTGGAGCAACTGCCGTGGTCCAAGCAGCTTACTGTGCCCCCAAAAAGGAGAGAGTGGCGATCAAGCGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGATATCCCAAGATGCTCATGTCCCAGCAGGTGCGGGAGAGCAGGCAAGAGGCACAGTAAGCTGCTaGGACCACGGCAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: KEISQDAHVPAGAGEQARGTVSC*DHGSCS Trigger: GGAGCAACTGCCGTGGTCCAAGCAGCTTACTGTGCC...TCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTCCCAGCTGTCCCACCTCAGCAGTTTTCCACTGACTGGTTCATTCACTCCAGGTTTATCCGCTaGATCGCCACTCTCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: PWLPAVPPQQFSTDWFIHSRFIR*IATLSF Trigger: AAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGGA...GTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGAGCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGCTGGGAGGTTTGTTGCTGGGTTCTTTGGCAGTTGTAGGTTCAGGCTCCAGGTTTATCCGCTaGATCGCCACTCTCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: SSKLGGLLLGSLAVVGSGSRFIR*IATLSF Trigger: AAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGGA...GCCTGAACCTACAACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTTGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS TCA 90 bp | TGGCTCATGGCCTGGATTTCTTTCAGGAGCTCATCCATGCTGGTCTaGCACTTCTCCAGGTTTATCCGCTTGATCGCCACTCTCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: WLMAWISFRSSSMLV*HFSRFIRLIATLSF Trigger: AAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGGAGAAGTGTCAGACCAGCATGGATGAGCTCCTGAAAGAAATCCAGGCCATGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS-3UTR CAA 90 bp | CACAGGTTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGGGCAGGAGAGAGACTaGAGCTGGCTGTGTGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: HRLEMRKAFRCVPREVNRGQERD*SWLCGH Trigger: ATGCCCACACAGCCAGCTCAAGTCTCTCTCCTGCCC...TCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAACCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CAA 90 bp | CAGAACTCCACTCTTATGTTCCCCCTTTGCCACAATGTGTTTAATAATATCCAGGGCACAGTAAGCTGCTaGGACCACGGCAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QNSTLMFPLCHNVFNNIQGTVSC*DHGSCS Trigger: GGAGCAACTGCCGTGGTCCAAGCAGCTTACTGTGCC...CTGGATATTATTAAACACATTGTGGCAAAGGGGGAACATAAGAGTGGAGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128880.8 |
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| CDS-3UTR CAA 90 bp | GAAACACCCTCTGCTGTATCTCTCCCAGGAGTAAATTCAAATCGAATATCATTTGGGCAGGAGAGAGACTaGAGCTGGCTGTGTGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: ETPSAVSLPGVNSNRISFGQERD*SWLCGH Trigger: ATGCCCACACAGCCAGCTCAAGTCTCTCTCCTGCCC...AAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143728.2 |
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| CDS-3UTR CAA 90 bp | CACAGGTTAGAAATGAGGAAAGCGTTCAGGTGTGTTCCAAGAGAAGTCAACAGAGTTAGGATGATGGCATaGGCTCATGGCCTGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: HRLEMRKAFRCVPREVNRVRMMA*AHGLDF Trigger: GAAATCCAGGCCATGAGCCAATGCCATCATCCTAAC...TCTGTTGACTTCTCTTGGAACACACCTGAACGCTTTCCTCATTTCTAACCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CAA 90 bp | ATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTACACCAGATGCCAGTTaGAAAGTGACAGATCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: ILHLPPSSKHSRGADLAGTPDAS*KVTDRF Trigger: AAACCGATCTGTCACTTTCAAACTGGCATCTGGTGT...ACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CAA 90 bp | ATTTTACATCTTCCACCATCCAGCAAACATTCTAGAGGGGCTGACCTCGCTGGTGCAAATCCTATCAGTTaGCCATCATCAGGAATATCC | + |
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Preference number: 5 (lower is better) Translates to: ILHLPPSSKHSRGADLAGANPIS*PSSGIS Trigger: GGATATTCCTGATGATGGCAAACTGATAGGATTTGC...ACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGTGGAAGATGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS-3UTR CAA 90 bp | GCAAGTCCATCTTCACAGGAGGATCAAAGATCAGTTTTTCTTCAGCTTAATTTTACAATCTTCTGCAGATaGGCTGCCACTATTACTAAA | + |
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Preference number: 5 (lower is better) Translates to: ASPSSQEDQRSVFLQLNFTIFCR*AATITK Trigger: TTTAGTAATAGTGGCAGCCAATCTGCAGAAGATTGT...AAAATTAAGCTGAAGAAAAACTGATCTTTGATCCTCCTGTGAAGATGGACTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040853.11 |
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| CDS GCA 72 bp | TTTGGGGGCACAGTAAGCTGCTTGGACCACGGCAGTTaGTCCACTCCCTATCACCTCCTGCAGCTCGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: FGGTVSCLDHGS*STPYHLLQLVV Trigger: GACTACGAGCTGCAGGAGGTGATAGGGAGTGGAGCAACTGCCGTGGTCCAAGCAGCTTACTGTGCCCCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS GCA 72 bp | GATCGCCACTCTCTCCTTTTTGGGGGCACAGTAAGCTaGTTGGACCACGGCAGTTGCTCCACTCCCTATCAC | + |
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Preference number: 6 (lower is better) Translates to: DRHSLLFGGTVS*LDHGSCSTPYH Trigger: GTGATAGGGAGTGGAGCAACTGCCGTGGTCCAAGCAGCTTACTGTGCCCCCAAAAAGGAGAGAGTGGCGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS TCA 72 bp | CCATGCTGGTCTGACACTTCTCCAGGTTTATCCGCTTaGTCGCCACTCTCTCCTTTTTGGGGGCACAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PCWSDTSPGLSA*SPLSPFWGHSK Trigger: CTTACTGTGCCCCCAAAAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGGAGAAGTGTCAGACCAGCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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| CDS CAA 72 bp | AGATGTGTAGTAAGACACAATGTTAGGATGATGGCATaGGCTCATGGCCTGGATTTCTTTCAGGAGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: RCVVRHNVRMMA*AHGLDFFQELI Trigger: GATGAGCTCCTGAAAGAAATCCAGGCCATGAGCCAATGCCATCATCCTAACATTGTGTCTTACTACACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040853.11 ENSMUST00000128880.8 |
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