Pregenerated sensors for OXNAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021906Ensembl transcript IDs: ENSMUST00000022462.14, ENSMUST00000164868.8, ENSMUST00000165523.8, ENSMUST00000168986.7, ENSMUST00000169649.2, ENSMUST00000170519.8, ENSMUST00000170600.8, ENSMUST00000171598.8, ENSMUST00000171849.2, ENSMUST00000227845.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCGGAAGTTTCTCGTGTGACTCGTGTAGCCGGGCTGGACATTTaGGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: LPEVSRVTRVAGLDI*EPHCPKWLSGLLCP Trigger: CGGGCACAGAAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGCTACACGAGTCACACGAGAAACTTCCGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR GCA 90 bp | TATCTCATAGCTACGTCCTTTGTCTGCGTGGTCCCGGTGGAGATCTaGCGAGTGGCGCAGGATAGAAAGCAGGGGGTTAATTCCGACCCC | + |
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Preference number: 1 (lower is better) Translates to: YLIATSFVCVVPVEI*RVAQDRKQGVNSDP Trigger: GGGGTCGGAATTAACCCCCTGCTTTCTATCCTGCGCCACTCGGCAGATCTCCACCGGGACCACGCAGACAAAGGACGTAGCTATGAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR CCA 90 bp | CCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTATaGCAATCTGAAATGTGGCCCTCAGACTGTCAGCCTGCCATGCCA | + |
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Preference number: 1 (lower is better) Translates to: PVVLPLGTLSPPPPL*QSEMWPSDCQPAMP Trigger: TGGCATGGCAGGCTGACAGTCTGAGGGCCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR CCA 90 bp | TGGAGACTCGTGAGTGATTTCACACACCTTAGCTGCAGCCATGACTaGGACACAGGTGAGGCTCCTCTATTTCCCAGGCCTCCGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: WRLVSDFTHLSCSHD*DTGEAPLFPRPPHP Trigger: AGGGTGCGGAGGCCTGGGAAATAGAGGAGCCTCACCTGTGTCCCAGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
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| 3UTR GCA 90 bp | GTAGAACAGTTTTACTGTCCCTATCTCATAGCTACGTCCTTTGTCTaGGTGGTCCCGGTGGAGATCTGCCGAGTGGCGCAGGATAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VEQFYCPYLIATSFV*VVPVEICRVAQDRK Trigger: CTTTCTATCCTGCGCCACTCGGCAGATCTCCACCGGGACCACGCAGACAAAGGACGTAGCTATGAGATAGGGACAGTAAAACTGTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR TCA 90 bp | GGGCATCTGTGGGCTGAGGGTCAAAGAAGAACTCTCCACCTACTCTaGGAGCCACTTCAGAGTCAAGTGTGCACTTATTGTGAACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GHLWAEGQRRTLHLL*EPLQSQVCTYCEPR Trigger: TCTGGGTTCACAATAAGTGCACACTTGACTCTGAAGTGGCTCTCAGAGTAGGTGGAGAGTTCTTCTTTGACCCTCAGCCCACAGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR TCA 90 bp | CCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTaGGTGGCTCCTTGGTATGGAGACTGCGTCTTCACTTCTGTAACT | + |
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Preference number: 1 (lower is better) Translates to: PENNPDLGTPRNVQL*VAPWYGDCVFTSVT Trigger: AGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR TCA 90 bp | TTATCAGCAACAAGCAAACGGAGGCTCTTCACTGATGGAGACTCGTaGGTGATTTCACACACCTTAGCTGCAGCCATGACTGGGACACAG | + |
|
Preference number: 1 (lower is better) Translates to: LSATSKRRLFTDGDS*VISHTLAAAMTGTQ Trigger: CTGTGTCCCAGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGTTGCTGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
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| 3UTR CCA 90 bp | CTTGGGAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATaGAGACTGCGTCTTCACTTCTGTAACTTGCTTATGTGGATACCC | + |
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Preference number: 1 (lower is better) Translates to: LGNSQKCPAVSGSLV*RLRLHFCNLLMWIP Trigger: GGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR CCA 90 bp | ACTCAAAATTCCAGAAAGATAGCGTCCCAGAAAACAACCCTGACTTaGGAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATG | + |
|
Preference number: 1 (lower is better) Translates to: TQNSRKIASQKTTLT*ELPEMSSCEWLLGM Trigger: CATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTATCTTTCTGGAATTTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR CCA 90 bp | GCATATTTCACCGCCAGTTCTATTATTCTGTCTCGTTCTAGCCGTTaGGGACTGGAGCAAATTGAAAACCCACCAACCACTGAGACTCCT | + |
|
Preference number: 1 (lower is better) Translates to: AYFTASSIILSRSSR*GLEQIENPPTTETP Trigger: AGGAGTCTCAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAGAACGAGACAGAATAATAGAACTGGCGGTGAAATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR TCA 90 bp | GTCTGTCATTGGAGGTGGTCCACAGACATAGAACAGAGTCTCTGCTaGGATGTGATCTCTTATCTCCTTCTCCGTTATTCTTCCGTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: VCHWRWSTDIEQSLC*DVISYLLLRYSSVC Trigger: ACAGACGGAAGAATAACGGAGAAGGAGATAAGAGATCACATCTCAGCAGAGACTCTGTTCTATGTCTGTGGACCACCTCCAATGACAGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR TCA 90 bp | AAAGGAAAAGTCTTTATCAGCAACAAGCAAACGGAGGCTCTTCACTaGTGGAGACTCGTGAGTGATTTCACACACCTTAGCTGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: KGKVFISNKQTEALH*WRLVSDFTHLSCSH Trigger: ATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGTTGCTGATAAAGACTTTTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
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| 3UTR GCA 90 bp | TATTCTTCCGTCTGTGACATAAGGCTTCAATTCCGCACTGATTTGTaGTGTCTGTTTTGTAACATGAAAACTGCAAGAAATCTTCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: YSSVCDIRLQFRTDL*CLFCNMKTARNLLR Trigger: CCTGAGAAGATTTCTTGCAGTTTTCATGTTACAAAACAGACAGCACAAATCAGTGCGGAATTGAAGCCTTATGTCACAGACGGAAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR CCA 90 bp | GAAATCTTCTCAGGGAATTCATGTACTAAGTCGAGGATATCTTTCTaGAATGTCAAACATATTGACTGGGTCAAGCTTAAACAGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: EIFSGNSCTKSRISF*NVKHIDWVKLKQEL Trigger: GAGCTCCTGTTTAAGCTTGACCCAGTCAATATGTTTGACATTCCAGAAAGATATCCTCGACTTAGTACATGAATTCCCTGAGAAGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAAGCAGGCCGGGCTGGACATTTaGGAGCCTCACTGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QVALRSSVPVPYHHFSKQAGLDI*EPHCPK Trigger: CTTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGC...CTGCTTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTACTCAGACTGTCAGCCTaGCATGCCAGCAGCTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: ACLPVVLPLGTLSPPPPLLRLSA*HASSST Trigger: TGTTGAGCTGCTGGCATGGCAGGCTGACAGTCTGAG...TAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCAGCCGGGCTGGACATTTaGGAGCCTCACTGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LPEMSSCEWLLGMETASSAGLDI*EPHCPK Trigger: CTTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGC...TGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTGCCGGGCTGGACATTTaGGAGCCTCACTGTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ELPEMSSCEWLLGMETASAGLDI*EPHCPK Trigger: CTTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGC...AGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCGGTGGAGATCTGCCGAGTGGCGCAGGATAGAAAGCAGGGGGTTAATTCCTTCGAGGGGCATCTGTaGGCTGAGGGTCAAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VPVEICRVAQDRKQGVNSFEGHL*AEGQRR Trigger: TCTTCTTTGACCCTCAGCCCACAGATGCCCCTCGAA...GGAATTAACCCCCTGCTTTCTATCCTGCGCCACTCGGCAGATCTCCACCGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGATCTGCCGAGTGGCGCAGGATAGAAAGCAGGGGGTTAATTCCGACCCCAAACCCACCAACCACTaGGACTCCTGGGATGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VEICRVAQDRKQGVNSDPKPTNH*DSWDEE Trigger: TTCTTCATCCCAGGAGTCTCAGTGGTTGGTGGGTTT...GGGGTCGGAATTAACCCCCTGCTTTCTATCCTGCGCCACTCGGCAGATCTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAAGCAGCTCAGACTGTCAGCCTaGCATGCCAGCAGCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: QVALRSSVPVPYHHFSKQLRLSA*HASSST Trigger: TGTTGAGCTGCTGGCATGGCAGGCTGACAGTCTGAG...CTGCTTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTGCTTGCTTGCGTAGATCCTGTAGGCCTGCCTTCCTGTGGTTCTTCCCTAGAAATGTCCAGCTGTaGGTGGCTCCTTGGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: VSACLRRSCRPAFLWFFPRNVQL*VAPWYG Trigger: TCCATACCAAGGAGCCACTCACAGCTGGACATTTCT...AGGGAAGAACCACAGGAAGGCAGGCCTACAGGATCTACGCAAGCAAGCAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTCCGCACTGATTTGTaGTGTCTGTTTTGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: VGLPSCGSSLRNPLPTPSFRTDL*CLFCNM Trigger: CATGTTACAAAACAGACAGCACAAATCAGTGCGGAA...GGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACGTCTGTCATTGGAGGTaGTCCACAGACATAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LRASLSQVALRSSVPVPYVCHWR*STDIEQ Trigger: CTGTTCTATGTCTGTGGACCACCTCCAATGACAGAC...GTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR CCA 90 bp | GATGAGGTTTCGAGGGGCATCTGTGGGCTGAGGGTCAAAGAAGAACTCTCCACCCTAGCCGTTGGGGACTaGAGCAAATTGAAAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DEVSRGICGLRVKEELSTLAVGD*SKLKTH Trigger: GTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAG...GGTGGAGAGTTCTTCTTTGACCCTCAGCCCACAGATGCCCCTCGAAACCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACTGGCAGCTTTCCAGGTaGTTAGAGAAAAAGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRASLSQVALRSSVPVPYWQLSR*LEKKSV Trigger: GACAGACTTTTTCTCTAAGCACCTGGAAAGCTGCCA...GTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTCCACCCCCTCCTTTATaGCAATCTGAAATGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: IASQKTTLTWELPEMSSCPPPPL*QSEMWP Trigger: GGGCCACATTTCAGATTGCCATAAAGGAGGGGGTGG...ACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAAGCAGCTCGCTGGTGTTCTTTaGACTGTAGAACAGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QVALRSSVPVPYHHFSKQLAGVL*TVEQFY Trigger: GTAAAACTGTTCTACAGTGCAAAGAACACCAGCGAG...CTGCTTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTGAGTGGGTCTGTCATTGGAGGTaGTCCACAGACATAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: SQKTTLTWELPEMSSCEWVCHWR*STDIEQ Trigger: CTGTTCTATGTCTGTGGACCACCTCCAATGACAGAC...CCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTTCCTTTATGGCAATCTaGAATGTGGCCCTCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: IASQKTTLTWELPEMSSCSFMAI*NVALRL Trigger: CAGTCTGAGGGCCACATTTCAGATTGCCATAAAGGA...ACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTATGGCAATCTGAAATGTGGCTCGCTGGTGTTCTTTaGACTGTAGAACAGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LPLGTLSPPPPLWQSEMWLAGVL*TVEQFY Trigger: GTAAAACTGTTCTACAGTGCAAAGAACACCAGCGAG...CCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCAGGATAGAAAGCAGGGGGTTAATTCCGACCCCTCCAGCAATCAAGATGAGCTCGCTGGTGTTCTTTaGACTGTAGAACAGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: AQDRKQGVNSDPSSNQDELAGVL*TVEQFY Trigger: GTAAAACTGTTCTACAGTGCAAAGAACACCAGCGAG...CTCATCTTGATTGCTGGAGGGGTCGGAATTAACCCCCTGCTTTCTATCCTGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR CCA 90 bp | AAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACTTCTGTACCAGAGAAACTCCATaGTTTTCTAGGTCCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KCPAVSGSLVWRLRLHFCTRETP*FSRSPP Trigger: TGGAGGGGACCTAGAAAACCATGGAGTTTCTCTGGT...ACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTCCCTACCACCACTTCTCAAAGCAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCGCACTGATTTGTaGTGTCTGTTTTGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: RSLPPLLKADVFLGNVAAFRTDL*CLFCNM Trigger: CATGTTACAAAACAGACAGCACAAATCAGTGCGGAA...AGCTGCCACGTTCCCAAGGAACACATCTGCTTTGAGAAGTGGTGGTAGGGAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR GCA 90 bp | TCATGGTGTAGAGGCCAACCAGAGAAACTCCATGGTTTTCTAGGTCCCCTCCATTGGCAGCTTTCCAGGTaGTTAGAGAAAAAGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SWCRGQPEKLHGFLGPLHWQLSR*LEKKSV Trigger: GACAGACTTTTTCTCTAAGCACCTGGAAAGCTGCCA...ATGGAGGGGACCTAGAAAACCATGGAGTTTCTCTGGTTGGCCTCTACACCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACTCGAGGATATCTTTCTaGAATGTCAAACATATTGAC | + |
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Preference number: 2 (lower is better) Translates to: LRASLSQVALRSSVPVPYSRISF*NVKHID Trigger: GTCAATATGTTTGACATTCCAGAAAGATATCCTCGA...GTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTTCTCAAAGCAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCAGGTGCTTGAAAAAGTCTGTCATTaGAGGTGGTCCACAGACATA | + |
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Preference number: 2 (lower is better) Translates to: PLLKADVFLGNVAAFQVLEKVCH*RWSTDI Trigger: TATGTCTGTGGACCACCTCCAATGACAGACTTTTTC...AAGCACCTGGAAAGCTGCCACGTTCCCAAGGAACACATCTGCTTTGAGAAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTTCTTTGCACTGTAGAACAGTTTTACTGTCCCTATCTCATAGCTACGTCAGTGTGCACTTATTGTaGACCCAGACAGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WCSLHCRTVLLSLSHSYVSVHLL*TQTAGG Trigger: CCCTCCTGCTGTCTGGGTTCACAATAAGTGCACACT...GACGTAGCTATGAGATAGGGACAGTAAAACTGTTCTACAGTGCAAAGAACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAACAGTTTTACTGTCCCTATCTCATAGCTACGTCCTTTGTCTGCGTGGTACTCTCCACCTACTCTaGGAGCCACTTCAGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CRTVLLSLSHSYVLCLRGTLHLL*EPLQSQ Trigger: TTGACTCTGAAGTGGCTCTCAGAGTAGGTGGAGAGT...ACCACGCAGACAAAGGACGTAGCTATGAGATAGGGACAGTAAAACTGTTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGATAGAAAGCAGGGGGTTAATTCCGACCCCTCCAGCAATCAAGATGAGGTTCTTCAGAGTCAAGTGTaGACTTATTGTGAACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QDRKQGVNSDPSSNQDEVLQSQV*TYCEPR Trigger: TCTGGGTTCACAATAAGTGCACACTTGACTCTGAAG...AACCTCATCTTGATTGCTGGAGGGGTCGGAATTAACCCCCTGCTTTCTATCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTCAGGTTGTTTTCAGTTaGTTTAACCACTTAAACTTG | + |
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Preference number: 2 (lower is better) Translates to: ELPEMSSCEWLLGMETASQVVFS*FNHLNL Trigger: CAAGTTTAAGTGGTTAAAGCAACTGAAAACAACCTG...AGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCGAAAAAGTCTGTCATTaGAGGTGGTCCACAGACATA | + |
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Preference number: 2 (lower is better) Translates to: RKIASQKTTLTWELPEMSEKVCH*RWSTDI Trigger: TATGTCTGTGGACCACCTCCAATGACAGACTTTTTC...GGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTATCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACTTCTGTGTACTAATGACAGCTTaGCACAAACTCAAAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KCPAVSGSLVWRLRLHFCVLMTA*HKLKIP Trigger: TGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTAC...ACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATGTTAGTACTAATGACAGCTTGCCACAAACTCAAAATTCCAGAAAGATAAGTGGCTCCTTGGTATaGAGACTGCGTCTTCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: LHVSTNDSLPQTQNSRKISGSLV*RLRLHF Trigger: GAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACT...TATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGGTTTTCTAGGTCCCCTCCATGTTAGTACTAATGACAGCTTGCCACAAACTTGTAACTTGCTTATGTaGATACCCAGGTTGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HGFLGPLHVSTNDSLPQTCNLLM*IPRLFS Trigger: TGAAAACAACCTGGGTATCCACATAAGCAAGTTACA...AGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAGGGGACCTAGAAAACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCATGTTAGTACTAATGACAGCTTGCCACAAACTCAAAATTCCAGAAAGATATTCACTTCTGTAACTTaGTTATGTGGATACCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LHVSTNDSLPQTQNSRKIFTSVT*LCGYPG Trigger: ACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAA...TATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR TCA 72 bp | AGGAGGCAGCTTAGCTTACTAGAGCCTGGGCATGATTaGCAGGCTGCAGGGGAGGGGCAAGAGCTCGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RRQLSLLEPGHD*QAAGEGQELGH Trigger: GTGGCCGAGCTCTTGCCCCTCCCCTGCAGCCTGTCAATCATGCCCAGGCTCTAGTAAGCTAAGCTGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| 3UTR CCA 72 bp | CCTTTGTCTGCGTGGTCCCGGTGGAGATCTGCCGAGTaGCGCAGGATAGAAAGCAGGGGGTTAATTCCGACC | + |
|
Preference number: 3 (lower is better) Translates to: PLSAWSRWRSAE*RRIESRGLIPT Trigger: GGTCGGAATTAACCCCCTGCTTTCTATCCTGCGCCACTCGGCAGATCTCCACCGGGACCACGCAGACAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACAGCCGGGCTGGACATTaGAGAGCCTCACTGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LRASLSQVALRSSVPVPYSRAGH*RASLSQ Trigger: TTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGCT...GTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR CCA 72 bp | CTCTCCCCACCCCCTCCTTTATGGCAATCTGAAATGTaGCCCTCAGACTGTCAGCCTGCCATGCCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSPPPPLWQSEM*PSDCQPAMPAA Trigger: AGCTGCTGGCATGGCAGGCTGACAGTCTGAGGGCCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR TCA 72 bp | GTTTCTCGTGTGACTCGTGTAGCCGGGCTGGACATTTaGGAGCCTCACTGTCCCAAGTGGCTCTCAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSRVTRVAGLDI*EPHCPKWLSGL Trigger: AAGACCTGAGAGCCACTTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGCTACACGAGTCACACGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR GCA 72 bp | TTTTACTGTCCCTATCTCATAGCTACGTCCTTTGTCTaGGTGGTCCCGGTGGAGATCTGCCGAGTGGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FYCPYLIATSFV*VVPVEICRVAQ Trigger: CTGCGCCACTCGGCAGATCTCCACCGGGACCACGCAGACAAAGGACGTAGCTATGAGATAGGGACAGTAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCCAATTCCGCACTGATTaGTGCTGTCTGTTTTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VGLPSCGSSLRNPLPTPSQFRTD*CCLFCN Trigger: GTTACAAAACAGACAGCACAAATCAGTGCGGAATTG...GGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| 3UTR CCA 72 bp | GTGAGTGATTTCACACACCTTAGCTGCAGCCATGACTaGGACACAGGTGAGGCTCCTCTATTTCCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSDFTHLSCSHD*DTGEAPLFPRP Trigger: AGGCCTGGGAAATAGAGGAGCCTCACCTGTGTCCCAGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACTTCTGTAGCCGGGCTGGACATTaGAGAGCCTCACTGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KCPAVSGSLVWRLRLHFCSRAGH*RASLSQ Trigger: TTGGGACAGTGAGGCTCTCAAATGTCCAGCCCGGCT...ACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR TCA 72 bp | AACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTaGGTGGCTCCTTGGTATGGAGACTGCGTCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: NPDLGTPRNVQL*VAPWYGDCVFT Trigger: AGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTGCTTGCTTGCGTAGATCCTGTAGGCCTGCCTTCCTGTGGTTCTTCCCTGAAAACAACCCTGACTaGGGAACTCCCAGAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSACLRRSCRPAFLWFFPENNPD*GTPRNV Trigger: GACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTC...AGGGAAGAACCACAGGAAGGCAGGCCTACAGGATCTACGCAAGCAAGCAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTATTAAGTAAAACTGAATaGTCTTTTCCCAGGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACLPVVLPLGTLSPPPPLLSKTE*SFPRSQ Trigger: CTGACTCCTGGGAAAAGACAATTCAGTTTTACTTAA...TAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTTCCCTACCACCACTTCTCAAAGCAGATGTGTTCCTTGGGAACGTGGCAGCTGCTCGCTGGTGTTCTTaGCACTGTAGAACAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSLPPLLKADVFLGNVAAARWCS*HCRTVL Trigger: TAAAACTGTTCTACAGTGCAAAGAACACCAGCGAGC...AGCTGCCACGTTCCCAAGGAACACATCTGCTTTGAGAAGTGGTGGTAGGGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAACAATTCCGCACTGATTaGTGCTGTCTGTTTTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPSGSQVFCARSLPPLLKQFRTD*CCLFCN Trigger: GTTACAAAACAGACAGCACAAATCAGTGCGGAATTG...TTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGAGGGTGGTCTGCATATTTCACCGCCAGTTCTATTATTCTGTCTCGTTCGGGGACTGGAGCAAATaGAAAACCCACCAACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SRRVVCIFHRQFYYSVSFGDWSK*KTHQPL Trigger: CAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCC...GAACGAGACAGAATAATAGAACTGGCGGTGAAATATGCAGACCACCCTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| 3UTR TCA 72 bp | ACAAGCAAACGGAGGCTCTTCACTGATGGAGACTCGTaGGTGATTTCACACACCTTAGCTGCAGCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: TSKRRLFTDGDS*VISHTLAAAMT Trigger: AGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| 3UTR GCA 72 bp | CAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCAGGTaGTTAGAGAAAAAGTCTGTCATTGGAGGTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QMCSLGTWQLSR*LEKKSVIGGGP Trigger: TGGACCACCTCCAATGACAGACTTTTTCTCTAAGCACCTGGAAAGCTGCCACGTTCCCAAGGAACACATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR CCA 72 bp | TCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATaGAGACTGCGTCTTCACTTCTGTAACTTGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: SQKCPAVSGSLV*RLRLHFCNLLM Trigger: CATAAGCAAGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR CCA 72 bp | ACCGCCAGTTCTATTATTCTGTCTCGTTCTAGCCGTTaGGGACTGGAGCAAATTGAAAACCCACCAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: TASSIILSRSSR*GLEQIENPPTT Trigger: AGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAGAACGAGACAGAATAATAGAACTGGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATAGAAAGCAGGGGGTTAATTCCGACCCCTCCAGCAATCAAGATGAGGTTGCTCGCTGGTGTTCTTaGCACTGTAGAACAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QDRKQGVNSDPSSNQDEVARWCS*HCRTVL Trigger: TAAAACTGTTCTACAGTGCAAAGAACACCAGCGAGC...AACCTCATCTTGATTGCTGGAGGGGTCGGAATTAACCCCCTGCTTTCTATCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTATGGCAATCTGAAATGTGGTTAAGTAAAACTGAATaGTCTTTTCCCAGGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLGTLSPPPPLWQSEMWLSKTE*SFPRSQ Trigger: CTGACTCCTGGGAAAAGACAATTCAGTTTTACTTAA...CCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCACTTCTGTAACTTGCTTATGTGGATACCCAGGTTGTTTTCAGTTGCTTGCTGTGAGTGGCTCCTaGGTATGGAGACTGCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VFTSVTCLCGYPGCFQLLAVSGS*VWRLRL Trigger: AAGACGCAGTCTCCATACCAAGGAGCCACTCACAGC...AAGCAACTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGAAAAAGTCTGTCATaGGAGGTGGTCCACAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: RKIASQKTTLTWELPEMSRKSLS*EVVHRH Trigger: ATGTCTGTGGACCACCTCCAATGACAGACTTTTTCT...GGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTATCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| 3UTR TCA 72 bp | GTCTTTATCAGCAACAAGCAAACGGAGGCTCTTCACTaGTGGAGACTCGTGAGTGATTTCACACACCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFISNKQTEALH*WRLVSDFTHLS Trigger: GCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGTTGCTGATAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| 3UTR TCA 72 bp | TGGAGGTGGTCCACAGACATAGAACAGAGTCTCTGCTaGGATGTGATCTCTTATCTCCTTCTCCGTTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: WRWSTDIEQSLC*DVISYLLLRYS Trigger: AGAATAACGGAGAAGGAGATAAGAGATCACATCTCAGCAGAGACTCTGTTCTATGTCTGTGGACCACCTCCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGTTCATGGTGTAGAGGCCAACCAGAGAAACTCCATGGTTTTCTAGGTCCCAGTACTAATGACAGCTaGCCACAAACTCAAAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISSWCRGQPEKLHGFLGPSTNDS*PQTQNS Trigger: GGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACT...GGGACCTAGAAAACCATGGAGTTTCTCTGGTTGGCCTCTACACCATGAACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR GCA 72 bp | CCTTGGTATGGAGACTGCGTCTTCACTTCTGTAACTTaGTTATGTGGATACCCAGGTTGTTTTCAGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PWYGDCVFTSVT*LCGYPGCFQLL Trigger: AAGCAACTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR CCA 72 bp | TGGAGACTGCGTCTTCACTTCTGTAACTTGCTTATGTaGATACCCAGGTTGTTTTCAGTTGCTTTAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: WRLRLHFCNLLM*IPRLFSVALTT Trigger: AGTGGTTAAAGCAACTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR CCA 72 bp | TCGAGGATATCTTTCTGGAATGTCAAACATATTGACTaGGTCAAGCTTAAACAGGAGCTCGCTGGTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRISFWNVKHID*VKLKQELAGVL Trigger: AAGAACACCAGCGAGCTCCTGTTTAAGCTTGACCCAGTCAATATGTTTGACATTCCAGAAAGATATCCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| 3UTR CCA 72 bp | CTAAAGGCGAAAGAAAACTCTGTATTAATCAGTTCATaGTGTAGAGGCCAACCAGAGAAACTCCATGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKAKENSVLISS*CRGQPEKLHGF Trigger: AAAACCATGGAGTTTCTCTGGTTGGCCTCTACACCATGAACTGATTAATACAGAGTTTTCTTTCGCCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR TCA 72 bp | AAGAAAAATCAATATAGTCAAAAAGAGTGTGACCAATaGAGTCTGCCGGAAGTTTCTCGTGTGACTCGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KKNQYSQKECDQ*SLPEVSRVTRV Trigger: TACACGAGTCACACGAGAAACTTCCGGCAGACTTCATTGGTCACACTCTTTTTGACTATATTGATTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| 3UTR CCA 72 bp | TCAGGGAATTCATGTACTAAGTCGAGGATATCTTTCTaGAATGTCAAACATATTGACTGGGTCAAGCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGNSCTKSRISF*NVKHIDWVKLK Trigger: TTTAAGCTTGACCCAGTCAATATGTTTGACATTCCAGAAAGATATCCTCGACTTAGTACATGAATTCCCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | CACCTTAGCTGCAGCCATGACTGGGACACAGGTGAGGCTCCTCTATTTCCCAGGCCCCACGAAGCAGCCTaGGTGCAGACGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLSCSHDWDTGEAPLFPRPHEAA*VQTAPT Trigger: TGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGG...CCTGGGAAATAGAGGAGCCTCACCTGTGTCCCAGTCATGGCTGCAGCTAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCCTGGCTAGGGTAAGGTaGCGCAAAGTGCTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVGLPSCGSSLRNPLPTPLARVR*RKVLAF Trigger: GAAGGCCAGCACTTTGCGTCACCTTACCCTAGCCAG...GGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTACAGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGCTTGCTTGCGTAGATCCTGTAGGCCTGCCTTCCTGTGGTTCTTCCCTCCCCACGAAGCAGCCTaGGTGCAGACGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSACLRRSCRPAFLWFFPPHEAA*VQTAPT Trigger: TGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGG...AGGGAAGAACCACAGGAAGGCAGGCCTACAGGATCTACGCAAGCAAGCAGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCAGCAGGAGGGTGGTCTaGATATTTCACCGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGLPSCGSSLRNPLPTPSSRRVV*IFHRQF Trigger: GAACTGGCGGTGAAATATGCAGACCACCCTCCTGCT...GGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCAAGAAATCAACCCACTaGCCAGCCTTAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLPSCGSSLRNPLPTPSKKSTH*PALKEK Trigger: CTTTTCCTTTAAGGCTGGCCAGTGGGTTGATTTCTT...GGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTAGGCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCGAAAAAGTCTGTCATTaGAGGTGGTCCACAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: PVGLPSCGSSLRNPLPTPEKVCH*RWSTDI Trigger: TATGTCTGTGGACCACCTCCAATGACAGACTTTTTC...GGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGCCTACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGCCACAAACTCAAAATTCCAGAAAGATAGCGTCCCAGAAAACAACCCTCCCCACGAAGCAGCCTaGGTGCAGACGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLATNSKFQKDSVPENNPPHEAA*VQTAPT Trigger: TGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGG...AGGGTTGTTTTCTGGGACGCTATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAACAGTTTTACTGTCCCTATCTCATAGCTACGTCCTTTGTCTGCGTGCCCCACGAAGCAGCCTaGGTGCAGACGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVEQFYCPYLIATSFVCVPHEAA*VQTAPT Trigger: TGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGG...CACGCAGACAAAGGACGTAGCTATGAGATAGGGACAGTAAAACTGTTCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCAAAACCCACCAACCACTaGGACTCCTGGGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPEMSSCEWLLGMETASSKPTNH*DSWDEE Trigger: TTCTTCATCCCAGGAGTCTCAGTGGTTGGTGGGTTT...TGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACAAACCCACCAACCACTaGGACTCCTGGGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQKCPAVSGSLVWRLRLHKPTNH*DSWDEE Trigger: TTCTTCATCCCAGGAGTCTCAGTGGTTGGTGGGTTT...GTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | GCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTGAGACTCTCCACCTACTCTaGGAGCCACTTCAGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASQKTTLTWELPEMSSCETLHLL*EPLQSQ Trigger: TTGACTCTGAAGTGGCTCTCAGAGTAGGTGGAGAGT...CTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAAGCAGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVALRSSVPVPYHHFSKQAVLSR*SVFLLD Trigger: ATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGC...CTGCTTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTAGCAGGAGGGTGGTCTaGATATTTCACCGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IASQKTTLTWELPEMSSCSRRVV*IFHRQF Trigger: GAACTGGCGGTGAAATATGCAGACCACCCTCCTGCT...ACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | TCACACACCTTAGCTGCAGCCATGACTGGGACACAGGTGAGGCTCCTCTATTTCGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHTLAAAMTGTQVRLLYFAVLSR*SVFLLD Trigger: ATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGC...GAAATAGAGGAGCCTCACCTGTGTCCCAGTCATGGCTGCAGCTAAGGTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCATCTCGTTCTAGCCGTTaGGGACTGGAGCAAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPEMSSCEWLLGMETASSSRSSR*GLEQIE Trigger: TTCAATTTGCTCCAGTCCCCAACGGCTAGAACGAGA...TGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTGTCTGTCATTGGAGGTaGTCCACAGACATAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPEMSSCEWLLGMETASVCHWR*STDIEQ Trigger: CTGTTCTATGTCTGTGGACCACCTCCAATGACAGAC...AGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| 3UTR CAA 72 bp | GGGAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTaGGTATGGAGACTGCGTCTTCACTTCTGTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNSQKCPAVSGS*VWRLRLHFCNL Trigger: CAAGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCAGGTGCTTAGAGAAAAAGTCAAACCCACCAACCACTaGGACTCCTGGGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ADVFLGNVAAFQVLREKVKPTNH*DSWDEE Trigger: TTCTTCATCCCAGGAGTCTCAGTGGTTGGTGGGTTT...GACTTTTTCTCTAAGCACCTGGAAAGCTGCCACGTTCCCAAGGAACACATCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTTCAGAGTCAAGTGTGCACTTATTGTGAACCCAGACAGCAGGAGGGTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHFRVKCALIVNPDSRRVAVLSR*SVFLLD Trigger: ATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGC...CACCCTCCTGCTGTCTGGGTTCACAATAAGTGCACACTTGACTCTGAAGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGATAGCGTCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCTTCGAGGGGCATCTGTaGGCTGAGGGTCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKIASQKTTLTWELPEMSFEGHL*AEGQRR Trigger: TCTTCTTTGACCCTCAGCCCACAGATGCCCCTCGAA...GGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGACGCTATCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR TCA 90 bp | ATTGACTGGGTCAAGCTTAAACAGGAGCTCGCTGGTGTTCTTTGCACTGTAGAACTGAGACTCCTGGGATaGAGAAATCAACCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IDWVKLKQELAGVLCTVELRLLG*RNQPTG Trigger: GCCAGTGGGTTGATTTCTTCATCCCAGGAGTCTCAG...TTCTACAGTGCAAAGAACACCAGCGAGCTCCTGTTTAAGCTTGACCCAGTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGCTCGCTGGTGTTCTTTaGACTGTAGAACAGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLTWELPEMSSCEWLLGMLAGVL*TVEQFY Trigger: GTAAAACTGTTCTACAGTGCAAAGAACACCAGCGAG...CATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR TCA 90 bp | GTCGAGGATATCTTTCTTAAACAGGAGCTCGCTGGTGTTCTTTGCACTGTAGAACTGAGACTCCTGGGATaGAGAAATCAACCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEDIFLKQELAGVLCTVELRLLG*RNQPTG Trigger: GCCAGTGGGTTGATTTCTTCATCCCAGGAGTCTCAG...TTCTACAGTGCAAAGAACACCAGCGAGCTCCTGTTTAAGAAAGATATCCTCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170519.8 |
||
| CDS-3UTR GCA 90 bp | TATCTCCTTCTCCGTTATTCTTCCGTCTGTGACATAAGGCTTCAATTCCGCACTAGCAGGAGGGTGGTCTaGATATTTCACCGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLRYSSVCDIRLQFRTSRRVV*IFHRQF Trigger: GAACTGGCGGTGAAATATGCAGACCACCCTCCTGCT...AGTGCGGAATTGAAGCCTTATGTCACAGACGGAAGAATAACGGAGAAGGAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGAAAACAACCCTGACTTGGGAACTCCCAGAAATGTCCAGCTGTGAGTGGCTTCAGAGTCAAGTGTaGACTTATTGTGAACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKTTLTWELPEMSSCEWLQSQV*TYCEPR Trigger: TCTGGGTTCACAATAAGTGCACACTTGACTCTGAAG...CCACTCACAGCTGGACATTTCTGGGAGTTCCCAAGTCAGGGTTGTTTTCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR GCA 90 bp | GAACTCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTTCCGCACTGATTTGTaGTGTCTGTTTTGTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: ELPEMSSCEWLLGMETASFRTDL*CLFCNM Trigger: CATGTTACAAAACAGACAGCACAAATCAGTGCGGAA...AGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR CCA 90 bp | TCATTGGAGGTGGTCCACAGACATAGAACAGAGTCTCTGCTGAGATGTGATCTCTCTCGTTCTAGCCGTTaGGGACTGGAGCAAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEVVHRHRTESLLRCDLSRSSR*GLEQIE Trigger: TTCAATTTGCTCCAGTCCCCAACGGCTAGAACGAGA...GAGATCACATCTCAGCAGAGACTCTGTTCTATGTCTGTGGACCACCTCCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTTAGTACTAATGACAGCTTGCCACAAACTCAAAATTCCAGAAAGATACCCGGCGGAGGACACTaGCAGTTCTCTCTAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVSTNDSLPQTQNSRKIPGGGH*QFSLGG Trigger: ACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGG...TATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCAGGTGCTTAGAGAAAAAGTCAAGAAATCAACCCACTaGCCAGCCTTAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ADVFLGNVAAFQVLREKVKKSTH*PALKEK Trigger: CTTTTCCTTTAAGGCTGGCCAGTGGGTTGATTTCTT...GACTTTTTCTCTAAGCACCTGGAAAGCTGCCACGTTCCCAAGGAACACATCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAGATGTGTTCCTTGGGAACGTGGCAGCTTTCCAGGTGCTTAGAGAAAAGAAATCAACCCACTaGCCAGCCTTAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKADVFLGNVAAFQVLREKKSTH*PALKEK Trigger: CTTTTCCTTTAAGGCTGGCCAGTGGGTTGATTTCTT...TTCTCTAAGCACCTGGAAAGCTGCCACGTTCCCAAGGAACACATCTGCTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTTTTCTAGGTCCCCTCCATGTTAGTACTAATGACAGCTTGCCACAAACTCTAGCCGTTGGGGACTaGAGCAAATTGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGFLGPLHVSTNDSLPQTLAVGD*SKLKTH Trigger: GTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAG...AGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAGGGGACCTAGAAAACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | TATCTCCTTCTCCGTTATTCTTCCGTCTGTGACATAAGGCTTCAATTCCGCACTCTAGCCGTTGGGGACTaGAGCAAATTGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLRYSSVCDIRLQFRTLAVGD*SKLKTH Trigger: GTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAG...AGTGCGGAATTGAAGCCTTATGTCACAGACGGAAGAATAACGGAGAAGGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACTCTGTATTAATCAGTTCATGGTGTAGAGGCCAACCAGAGAAACTCCATCTGAGACTCCTGGGATaGAGAAATCAACCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENSVLISSWCRGQPEKLHLRLLG*RNQPTG Trigger: GCCAGTGGGTTGATTTCTTCATCCCAGGAGTCTCAG...ATGGAGTTTCTCTGGTTGGCCTCTACACCATGAACTGATTAATACAGAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCACTTCTGTAACTTGCTTATGTGGATACCCAGGTTGTTTTCAGTTGCTTAGTGTGCACTTATTGTaGACCCAGACAGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSVTCLCGYPGCFQLLSVHLL*TQTAGG Trigger: CCCTCCTGCTGTCTGGGTTCACAATAAGTGCACACT...AAGCAACTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR CCA 90 bp | GACTGCGTCTTCACTTCTGTAACTTGCTTATGTGGATACCCAGGTTGTTTTCAGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DCVFTSVTCLCGYPGCFQAVLSR*SVFLLD Trigger: ATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGC...CTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCCACAAACTCAAAATTCCAGAAAGATAGCGTCCCAGAAAACAACCCTTGGCAGCTTTCCAGGTaGTTAGAGAAAAAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLATNSKFQKDSVPENNPWQLSR*LEKKSV Trigger: GACAGACTTTTTCTCTAAGCACCTGGAAAGCTGCCA...AGGGTTGTTTTCTGGGACGCTATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
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| CDS-3UTR CCA 90 bp | GAAAACTCTGTATTAATCAGTTCATGGTGTAGAGGCCAACCAGAGAAACTCCATCTAGCCGTTGGGGACTaGAGCAAATTGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSVLISSWCRGQPEKLHLAVGD*SKLKTH Trigger: GTGGGTTTTCAATTTGCTCCAGTCCCCAACGGCTAG...ATGGAGTTTCTCTGGTTGGCCTCTACACCATGAACTGATTAATACAGAGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR CAA 72 bp | TCCTTGGTATGGAGACTGCGTCTTCACTTCTGTAACTaGCTTATGTGGATACCCAGGTTGTTTTCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVWRLRLHFCN*LMWIPRLFSVA Trigger: AGCAACTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTCTCCATACCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| 3UTR CAA 72 bp | CTAAGTCGAGGATATCTTTCTGGAATGTCAAACATATaGACTGGGTCAAGCTTAAACAGGAGCTCGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRGYLSGMSNI*TGSSLNRSSLV Trigger: CACCAGCGAGCTCCTGTTTAAGCTTGACCCAGTCAATATGTTTGACATTCCAGAAAGATATCCTCGACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164868.8 |
||
| 3UTR CAA 72 bp | TTTCTAGGTCCCCTCCATGTTAGTACTAATGACAGCTaGCCACAAACTCAAAATTCCAGAAAGATAGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLGPLHVSTNDS*PQTQNSRKIAS Trigger: GGACGCTATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAGGGGACCTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTTAGTACTAATGACAGCTTGCCACAAACTCAAAATTCCAGAAAGATATCTCGTTCTAGCCGTTaGGGACTGGAGCAAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHVSTNDSLPQTQNSRKISRSSR*GLEQIE Trigger: TTCAATTTGCTCCAGTCCCCAACGGCTAGAACGAGA...TATCTTTCTGGAATTTTGAGTTTGTGGCAAGCTGTCATTAGTACTAACATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS GCA 90 bp | GGTGACGCAAAGTGCTGGCCTTCAGTCCCCACGAAGCAGCCTGAGTaGAGACGGCTCCCACAGATCCTCGAGACAAGCCAGGAATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDAKCWPSVPTKQPE*RRLPQILETSQESR Trigger: CCTTGATTCCTGGCTTGTCTCGAGGATCTGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGGACTGAAGGCCAGCACTTTGCGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000165523.8 ENSMUST00000168986.7 ENSMUST00000169649.2 ENSMUST00000170600.8 ENSMUST00000171598.8 ENSMUST00000227845.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGCCTTCCTGTGGTTCTTCCCTTAGGAACCCTCTCCCCACCCCCTCCTTTAGGGGACTGGAGCAAATaGAAAACCCACCAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ACLPVVLPLGTLSPPPPLGDWSK*KTHQPL Trigger: CAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCC...TAAAGGAGGGGGTGGGGAGAGGGTTCCTAAGGGAAGAACCACAGGAAGGCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS CCA 90 bp | GCAGCCATGACCTCCCGGCGGAGGACACTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGATTTAATTATGCTGGCTAGGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAMTSRRRTLAVLSR*SVFLLDLIMLARVR Trigger: CCTTACCCTAGCCAGCATAATTAAATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGGTCATGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000168986.7 ENSMUST00000170600.8 ENSMUST00000171598.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCAAGTGGCTCTCAGGTCTTCTGTGCCCGTTCCCTACCACCACTTCTCAAAGGGGACTGGAGCAAATaGAAAACCCACCAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSGSQVFCARSLPPLLKGDWSK*KTHQPL Trigger: CAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCC...TTTGAGAAGTGGTGGTAGGGAACGGGCACAGAAGACCTGAGAGCCACTTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS TCA 90 bp | TTATCAGCAACAAGCAAACGGAGGCTCTTCACTGATGGAGACTCGTaGGTGATTTCACACACCTTAGCTGCAGCCATGACCTCCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSATSKRRLFTDGDS*VISHTLAAAMTSRR Trigger: CCGCCGGGAGGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGTTGCTGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000168986.7 ENSMUST00000170600.8 ENSMUST00000171598.8 |
||
| CDS TCA 90 bp | ATAGCTACGTCCTTTGTCTGCGTGGTCCCGGTGGAGATCTTATTGTaGACCCAGACAGCAGGAGGGTGGTCTGCATATTTCACCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IATSFVCVVPVEILL*TQTAGGWSAYFTAS Trigger: ACTGGCGGTGAAATATGCAGACCACCCTCCTGCTGTCTGGGTTCACAATAAGATCTCCACCGGGACCACGCAGACAAAGGACGTAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164868.8 ENSMUST00000170519.8 |
||
| CDS TCA 90 bp | CCAGCAATCAAGATGAGGTTTCGAGGGGCATCTGTGGGCTTATTGTaGACCCAGACAGCAGGAGGGTGGTCTGCATATTTCACCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PAIKMRFRGASVGLL*TQTAGGWSAYFTAS Trigger: ACTGGCGGTGAAATATGCAGACCACCCTCCTGCTGTCTGGGTTCACAATAAGCCCACAGATGCCCCTCGAAACCTCATCTTGATTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170600.8 |
||
| CDS TCA 90 bp | TCCCCACCCCCTCCTTTATGGCAATCTGAAATGTGGCCCTTATTGTaGACCCAGACAGCAGGAGGGTGGTCTGCATATTTCACCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPPPPLWQSEMWPLL*TQTAGGWSAYFTAS Trigger: ACTGGCGGTGAAATATGCAGACCACCCTCCTGCTGTCTGGGTTCACAATAAGGGCCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171849.2 |
||
| CDS CCA 90 bp | AAACACAAGGACTCCCGGCGGAGGACACTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGATTTAATTATGCTGGCTAGGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHKDSRRRTLAVLSR*SVFLLDLIMLARVR Trigger: CCTTACCCTAGCCAGCATAATTAAATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGTCCTTGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
||
| CDS-3UTR CAA 90 bp | AAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACTTCTGTGGGGACTGGAGCAAATaGAAAACCCACCAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KCPAVSGSLVWRLRLHFCGDWSK*KTHQPL Trigger: CAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCC...ACAGAAGTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGAAATGTCCAGCTGTGAGTGGCTCCTTGGTATGGAGACTGCGTCTTCACAGAAAAAGTCTGTCATaGGAGGTGGTCCACAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SQKCPAVSGSLVWRLRLHRKSLS*EVVHRH Trigger: ATGTCTGTGGACCACCTCCAATGACAGACTTTTTCT...GTGAAGACGCAGTCTCCATACCAAGGAGCCACTCACAGCTGGACATTTCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR CAA 90 bp | TCATGGTGTAGAGGCCAACCAGAGAAACTCCATGGTTTTCTAGGTCCCCTCCATGCTCGCTGGTGTTCTTaGCACTGTAGAACAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SWCRGQPEKLHGFLGPLHARWCS*HCRTVL Trigger: TAAAACTGTTCTACAGTGCAAAGAACACCAGCGAGC...ATGGAGGGGACCTAGAAAACCATGGAGTTTCTCTGGTTGGCCTCTACACCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS-3UTR CAA 90 bp | GACTGCGTCTTCACTTCTGTAACTTGCTTATGTGGATACCCAGGTTGTTTTCAGCAATTCCGCACTGATTaGTGCTGTCTGTTTTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCVFTSVTCLCGYPGCFQQFRTD*CCLFCN Trigger: GTTACAAAACAGACAGCACAAATCAGTGCGGAATTG...CTGAAAACAACCTGGGTATCCACATAAGCAAGTTACAGAAGTGAAGACGCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022462.14 |
||
| CDS TCA 72 bp | CGCAAAGTGCTGGCCTTCAGTCCCCACGAAGCAGCCTaGGTGCAGACGGCTCCCACAGATCCTCGAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: RKVLAFSPHEAA*VQTAPTDPRDK Trigger: CTTGTCTCGAGGATCTGTGGGAGCCGTCTGCACTCAGGCTGCTTCGTGGGGACTGAAGGCCAGCACTTTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000165523.8 ENSMUST00000168986.7 ENSMUST00000169649.2 ENSMUST00000170600.8 ENSMUST00000171598.8 ENSMUST00000227845.2 |
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| CDS TCA 72 bp | CCTGGGATGAAGAAATCAACCCTGGCTAGGGTAAGGTaGCGCAAAGTGCTGGCCTTCAGTCCCCACGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PGMKKSTLARVR*RKVLAFSPHEA Trigger: TGCTTCGTGGGGACTGAAGGCCAGCACTTTGCGTCACCTTACCCTAGCCAGGGTTGATTTCTTCATCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169649.2 |
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| CDS CCA 72 bp | AAAGCAGGAAACACAAGGACTCCCGGCGGAGGACACTaGCAGTTCTCTCTAGGTGGTCCGTTTTCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KAGNTRTPGGGH*QFSLGGPFSFW Trigger: CCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGTCCTTGTGTTTCCTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
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| CDS TCA 72 bp | AGGAACCCTCTCCCCACCCCCTCCTTTATGGCAATCTaGAATGTGGCCCTTATTGTGAACCCAGACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RNPLPTPSFMAI*NVALIVNPDSR Trigger: CCTGCTGTCTGGGTTCACAATAAGGGCCACATTTCAGATTGCCATAAAGGAGGGGGTGGGGAGAGGGTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171849.2 |
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| CDS CCA 72 bp | CCCTCCCGGCGGAGGACACTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGATTTAATTATGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PSRRRTLAVLSR*SVFLLDLIMLA Trigger: AGCCAGCATAATTAAATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165523.8 |
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| CDS CCA 72 bp | ACCTCCCGGCGGAGGACACTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGATTTAATTATGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TSRRRTLAVLSR*SVFLLDLIMLA Trigger: AGCCAGCATAATTAAATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000168986.7 ENSMUST00000170600.8 ENSMUST00000171598.8 |
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| CDS CCA 72 bp | GACTCCCGGCGGAGGACACTGGCAGTTCTCTCTAGGTaGTCCGTTTTCCTTCTGGATTTAATTATGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DSRRRTLAVLSR*SVFLLDLIMLA Trigger: AGCCAGCATAATTAAATCCAGAAGGAAAACGGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227845.2 |
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| CDS TCA 72 bp | ACAAGCAAACGGAGGCTCTTCACTGATGGAGACTCGTaGGTGATTTCACACACCTTAGCTGCAGCCATGACC | + |
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Preference number: 6 (lower is better) Translates to: TSKRRLFTDGDS*VISHTLAAAMT Trigger: GGTCATGGCTGCAGCTAAGGTGTGTGAAATCACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000168986.7 ENSMUST00000170600.8 ENSMUST00000171598.8 |
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| CDS TCA 72 bp | AAGATGAGGTTTCGAGGGGCATCTGTGGGCTTATTGTaGACCCAGACAGCAGGAGGGTGGTCTGCATATTTC | + |
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Preference number: 6 (lower is better) Translates to: KMRFRGASVGLL*TQTAGGWSAYF Trigger: GAAATATGCAGACCACCCTCCTGCTGTCTGGGTTCACAATAAGCCCACAGATGCCCCTCGAAACCTCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170600.8 |
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| CDS TCA 72 bp | TTCCTTCTGGATTTAATTATGCTGGCTAGGGTAAGGTaGCGCAAAGTGCTGGCCTTCAGTCCCCACGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLLDLIMLARVR*RKVLAFSPHEA Trigger: TGCTTCGTGGGGACTGAAGGCCAGCACTTTGCGTCACCTTACCCTAGCCAGCATAATTAAATCCAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022462.14 ENSMUST00000164868.8 ENSMUST00000165523.8 ENSMUST00000168986.7 ENSMUST00000170600.8 ENSMUST00000171598.8 ENSMUST00000227845.2 |
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| CDS TCA 72 bp | CCTCCTTTATGGCAATCTGAAATGTGGCCCTTATTGTaGACCCAGACAGCAGGAGGGTGGTCTGCATATTTC | + |
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Preference number: 6 (lower is better) Translates to: PPLWQSEMWPLL*TQTAGGWSAYF Trigger: GAAATATGCAGACCACCCTCCTGCTGTCTGGGTTCACAATAAGGGCCACATTTCAGATTGCCATAAAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171849.2 |
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