Pregenerated sensors for OXLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039670Ensembl transcript IDs: ENSMUST00000044007.3, ENSMUST00000137632.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTTGTTACACAAGAATTCCTAATCCTTGCAGACTTGTaGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: VVTQEFLILADL*SLPDSGIKVTL Trigger: GAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTGTGTAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | CTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCTGGTTCAGCATGGGGGCCCTGTaGGGTTCCCCCTGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LADLWSLPDSGIKVTLWFSMGAL*GSPWAG Trigger: CCCTGCCCAGGGGGAACCCCACAGGGCCCCCATGCT...GAACCAGAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | CCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTTTCGCGCAACCCGGTTaGGGCACTGGCGGCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PNPCRLVESSRLRDKSDPFAQPG*GTGGRS Trigger: TGAGCGGCCGCCAGTGCCCCAACCGGGTTGCGCGAA...AGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR TCA 90 bp | TCTGGTTCCTTAAGGGTAGTGTCTGTCCATGATAAGGAGTCCCGGGTAAAATGGGGAGCACGGTGTCTGTaGAGACTCTGGCAGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGSLRVVSVHDKESRVKWGARCL*RLWQQS Trigger: GGACTGCTGCCAGAGTCTTCACAGACACCGTGCTCC...CCATTTTACCCGGGACTCCTTATCATGGACAGACACTACCCTTAAGGAACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCTGGTTGGCAGCAGTCCCAGCTaGAGAAATGTTGCGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PCRLVESSRLRDKSDPLVGSSPS*RNVAFP Trigger: AGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCC...AACCAGAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | GTTGTTACACAAGAATTCCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAAGGCTCAAGCTCAGGTaGCAGCGAGCATGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VVTQEFLILADLWSLPDSRLKLR*QRAWGP Trigger: GGGCCCCCATGCTCGCTGCCACCTGAGCTTGAGCCT...TGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTGTGTAACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | CTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCTGGTTCTCATGCAGCAGTTGGTaGGAGGCTCAAGCTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LADLWSLPDSGIKVTLWFSCSSW*EAQAQV Trigger: CACCTGAGCTTGAGCCTCCCACCAACTGCTGCATGA...GAACCAGAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | CCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCACTCATGCAGCAGTTaGTGGGAGGCTCAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PNPCRLVESSRLRDKSDPHSCSS*WEAQAQ Trigger: CTGAGCTTGAGCCTCCCACCAACTGCTGCATGAGTG...AGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | ACAAGAATTCCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAACGTGCTCCTCTAGAATaGCCAGGGCCTTCTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TRIPNPCRLVESSRLRDKRAPLE*PGPSPR Trigger: GCGGGGAGAAGGCCCTGGCCATTCTAGAGGAGCACG...TTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCCTTAAGGGTAGTGTCTGTCCATGATAAGGAGTCCCGGGTAAAATGGAAACCTTCTTCCCTGTaGTCCATCCCCAAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGSLRVVSVHDKESRVKWKPSSL*SIPKFL Trigger: CAGAAACTTGGGGATGGACCACAGGGAAGAAGGTTT...CCATTTTACCCGGGACTCCTTATCATGGACAGACACTACCCTTAAGGAACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR TCA 90 bp | ACAAGAATTCCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAAATGTTGCGTTCCCTaGAGAAAGCTCTCAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TRIPNPCRLVESSRLRDKKCCVP*RKLSVS Trigger: GCTCACTGAGAGCTTTCTTCAGGGAACGCAACATTT...TTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| 3UTR CAA 72 bp | GAAGTTGTTACACAAGAATTCCTAATCCTTGCAGACTaGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: EVVTQEFLILAD*WSLPDSGIKVT Trigger: GGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTGTGTAACAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CCA 90 bp | GAAGACTCTGGCAGCAGTCCCAGCTGGAGAAATGTTGCGTTCCCATaGTTCCTCCAAGCGCTGGCCTGCCTCCCCGAACGGGGAAACCCC | + |
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Preference number: 5 (lower is better) Translates to: EDSGSSPSWRNVAFP*FLQALACLPERGNP Trigger: GGGGTTTCCCCGTTCGGGGAGGCAGGCCAGCGCTTGGAGGAACCATGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137632.2 |
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| CDS CCA 90 bp | GCACTGGAGCACGGTGTCTGTGAAGACTCTGGCAGCAGTCCCAGCTaGAGAAATGTTGCGTTCCCATGGTTCCTCCAAGCGCTGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALEHGVCEDSGSSPS*RNVAFPWFLQALAC Trigger: GCAGGCCAGCGCTTGGAGGAACCATGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTCACAGACACCGTGCTCCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137632.2 |
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| CDS-3UTR CAA 90 bp | CCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCTGGTTCTTCGCGCAACCCGGTaGGGGCACTGGCGGCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: PCRLVESSRLRDKSDPLVLRATR*GHWRPL Trigger: GAGCGGCCGCCAGTGCCCCAACCGGGTTGCGCGAAG...AACCAGAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS TCA 90 bp | AAGTTTCTGCGGCTATCAGTGACTTGCACTGGAGCACGGTGTCTGTaGAGACTCTGGCAGCAGTCCCAGCTGGAGAAATGTTGCGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: KFLRLSVTCTGARCL*RLWQQSQLEKCCVP Trigger: GGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTCACAGACACCGTGCTCCAGTGCAAGTCACTGATAGCCGCAGAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS CCA 90 bp | GGCTCCCTGTCATCCTCTGTACCTACTTGGAAACCTTCTTCCCTGTaGTCCATCCCCAAGTTTCTGCGGCTATCAGTGACTTGCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: GSLSSSVPTWKPSSL*SIPKFLRLSVTCTG Trigger: TCCAGTGCAAGTCACTGATAGCCGCAGAAACTTGGGGATGGACCACAGGGAAGAAGGTTTCCAAGTAGGTACAGAGGATGACAGGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS-3UTR CAA 90 bp | ATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAAGTGACCCTCTGGATCCTGAGGAAGGCCTaGAGGTTCTCATCTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: ILADLWSLPDSGIKVTLWILRKA*RFSSVT Trigger: CGTGACAGATGAGAACCTCAAGGCCTTCCTCAGGAT...CCAGAGGGTCACTTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS-3UTR CAA 90 bp | CAAGAATTCCTAATCCTTGCAGACTTGTGGAGTCTTCCAGACTCAGGGATAAAACCACTCATGCAGCAGTaGGTGGGAGGCTCAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: QEFLILADLWSLPDSGIKPLMQQ*VGGSSS Trigger: TGAGCTTGAGCCTCCCACCAACTGCTGCATGAGTGG...TTTTATCCCTGAGTCTGGAAGACTCCACAAGTCTGCAAGGATTAGGAATTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CAA 72 bp | AAACCCCGGCTGCACGAAAGGCTTCGCGCAACCCGGTaGGGGCACTGGCGGCCGCTCAGGCCGCGGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: KPRLHERLRATR*GHWRPLRPRAC Trigger: ACAAGCCCGCGGCCTGAGCGGCCGCCAGTGCCCCAACCGGGTTGCGCGAAGCCTTTCGTGCAGCCGGGGTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CCA 72 bp | GCTCAAGCTCAGGTGGCAGCGAGCATGGGGGCCCTGTaGGGTTCCCCCTGGGCAGGGAAGCCTTTGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AQAQVAASMGAL*GSPWAGKPLAP Trigger: GGGAGCCAAAGGCTTCCCTGCCCAGGGGGAACCCCACAGGGCCCCCATGCTCGCTGCCACCTGAGCTTGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS CAA 90 bp | GCTCCACTCTGCATGCGGAGCCGGATCTCCATCCTGAGGAAGGCCTaGAGGTTCTCATCTGTCACGTGCTCCTCTAGAATGGCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: APLCMRSRISILRKA*RFSSVTCSSRMARA Trigger: GGCCCTGGCCATTCTAGAGGAGCACGTGACAGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTCCGCATGCAGAGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CAA 90 bp | ACGGTGTCTGTGAAGACTCTGGCAGCAGTCCCAGCTGGAGAAATGTaGCGTTCCCATGGTTCCTCCAAGCGCTGGCCTGCCTCCCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: TVSVKTLAAVPAGEM*RSHGSSKRWPASPN Trigger: GTTCGGGGAGGCAGGCCAGCGCTTGGAGGAACCATGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTCACAGACACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137632.2 |
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| CDS GCA 72 bp | ATCCTGAGGAAGGCCTTGAGGTTCTCATCTGTCACGTaGTCCTCTAGAATGGCCAGGGCCTTCTCCCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ILRKALRFSSVT*SSRMARAFSPP Trigger: TGGCGGGGAGAAGGCCCTGGCCATTCTAGAGGAGCACGTGACAGATGAGAACCTCAAGGCCTTCCTCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CAA 90 bp | CCTGGGCAGGGAAGCCTTTGGCTCCCTGTCATCCTCTGTACCTACTaGGAAACCTTCTTCCCTGTGGTCCATCCCCAAGTTTCTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PGQGSLWLPVILCTY*ETFFPVVHPQVSAA Trigger: AGCCGCAGAAACTTGGGGATGGACCACAGGGAAGAAGGTTTCCAAGTAGGTACAGAGGATGACAGGGAGCCAAAGGCTTCCCTGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS TCA 72 bp | CCCTGTGGTCCATCCCCAAGTTTCTGCGGCTATCAGTaGCTTGCACTGGAGCACGGTGTCTGTGAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: PCGPSPSFCGYQ*LALEHGVCEDS Trigger: AGAGTCTTCACAGACACCGTGCTCCAGTGCAAGTCACTGATAGCCGCAGAAACTTGGGGATGGACCACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS CCA 72 bp | CATCCCCAAGTTTCTGCGGCTATCAGTGACTTGCACTaGAGCACGGTGTCTGTGAAGACTCTGGCAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: HPQVSAAISDLH*STVSVKTLAAV Trigger: GACTGCTGCCAGAGTCTTCACAGACACCGTGCTCCAGTGCAAGTCACTGATAGCCGCAGAAACTTGGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS CAA 72 bp | TGCATGCGGAGCCGGATCTCCATCCTGAGGAAGGCCTaGAGGTTCTCATCTGTCACGTGCTCCTCTAGAATG | + |
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Preference number: 6 (lower is better) Translates to: CMRSRISILRKA*RFSSVTCSSRM Trigger: CATTCTAGAGGAGCACGTGACAGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTCCGCATGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CAA 90 bp | ACGGTGTCTGTGAAGACTCTGGCAGCAGTCCCAGCTGGAGAAATGTaGCGTTCCCTGAAGAAAGCTCTCAGTGAGCACGCTGACCATGGT | + |
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Preference number: 6 (lower is better) Translates to: TVSVKTLAAVPAGEM*RSLKKALSEHADHG Trigger: ACCATGGTCAGCGTGCTCACTGAGAGCTTTCTTCAGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTCACAGACACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CAA 72 bp | GTGAAGACTCTGGCAGCAGTCCCAGCTGGAGAAATGTaGCGTTCCCTGAAGAAAGCTCTCAGTGAGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: VKTLAAVPAGEM*RSLKKALSEHA Trigger: AGCGTGCTCACTGAGAGCTTTCTTCAGGGAACGCAACATTTCTCCAGCTGGGACTGCTGCCAGAGTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044007.3 |
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| CDS CCA 72 bp | GAAGCCTTTGGCTCCCTGTCATCCTCTGTACCTACTTaGAAACCTTCTTCCCTGTGGTCCATCCCCAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: EAFGSLSSSVPT*KPSSLWSIPKF Trigger: AAACTTGGGGATGGACCACAGGGAAGAAGGTTTCCAAGTAGGTACAGAGGATGACAGGGAGCCAAAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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| CDS CCA 72 bp | TCATCCTCTGTACCTACTTGGAAACCTTCTTCCCTGTaGTCCATCCCCAAGTTTCTGCGGCTATCAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: SSSVPTWKPSSL*SIPKFLRLSVT Trigger: AGTCACTGATAGCCGCAGAAACTTGGGGATGGACCACAGGGAAGAAGGTTTCCAAGTAGGTACAGAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044007.3 ENSMUST00000137632.2 |
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