Pregenerated sensors for OXGR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044819Ensembl transcript IDs: ENSMUST00000058213.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCTAGGCTGGCTGGCCCTCACCCTCCAGGGACCTGCCTGCTCCTaGCAGCCCAGAGCTGGGGTTCCAAGTGCATGTCTTTGCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: SLGWLALTLQGPACS*QPRAGVPSACLCIR Trigger: CCTGATGCAAAGACATGCACTTGGAACCCCAGCTCTGGGCTGGCAGGAGCAGGCAGGTCCCTGGAGGGTGAGGGCCAGCCAGCCTAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 90 bp | CAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTaGTCATCGCAGGAACTGAGCCAAGGTGATGTCAGATGGGACCAA | + |
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Preference number: 1 (lower is better) Translates to: QSGRWPSRRTAGCFS*SSQELSQGDVRWDQ Trigger: TTGGTCCCATCTGACATCACCTTGGCTCAGTTCCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 90 bp | GTGGCCTACAACGCTGAAAACTCAGGCCAGAGGGCCACCTTGCTGTaGTTCGTCAGTTTTGGAGTCAGGGTTTCTATTTGTGTTAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: VAYNAENSGQRATLL*FVSFGVRVSICVRA Trigger: AGCTCTAACACAAATAGAAACCCTGACTCCAAAACTGACGAACCACAGCAAGGTGGCCCTCTGGCCTGAGTTTTCAGCGTTGTAGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 90 bp | CTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGAACTaGGCCAAGGTGATGTCAGATGGGACCAAGTACTTCCTTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LLGGQLDAFPDHRRN*AKVMSDGTKYFLFS Trigger: TGAGAAAAGGAAGTACTTGGTCCCATCTGACATCACCTTGGCTCAGTTCCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR GCA 90 bp | TTAAGGTGGCCTACAACGCTGAAAACTCAGGCCAGAGGGCCACCTTaGTGTGGTTCGTCAGTTTTGGAGTCAGGGTTTCTATTTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LRWPTTLKTQARGPP*CGSSVLESGFLFVL Trigger: TAACACAAATAGAAACCCTGACTCCAAAACTGACGAACCACAGCAAGGTGGCCCTCTGGCCTGAGTTTTCAGCGTTGTAGGCCACCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 90 bp | GCTGTAGGAGGTCCGGGGTTTAGTGTACGAGCACTAGTTTCTGTGTaGAGGCAATTAGTTGGTGGCAACAGAAATACTCTGAGTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: AVGGPGFSVRALVSV*RQLVGGNRNTLSSM Trigger: CATGGAACTCAGAGTATTTCTGTTGCCACCAACTAATTGCCTCCACACAGAAACTAGTGCTCGTACACTAAACCCCGGACCTCCTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 90 bp | TGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTaGCTTTTGCTTGGTTCTGGTTTGTTTGAGCCTTCCCATCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: WQKAVDLPQPHISVS*LLLGSGLFEPSHLG Trigger: GCCAAGATGGGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR GCA 90 bp | ACAATTTATGTGGGCTCTGAAGAGTCTATCTCAGACCCTCACATTTaGATGTCAAGAGCTTTACCACTGAGCCATCTCTCTGGCCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: TIYVGSEESISDPHI*MSRALPLSHLSGLD Trigger: GTCAAGGCCAGAGAGATGGCTCAGTGGTAAAGCTCTTGACATGCAAATGTGAGGGTCTGAGATAGACTCTTCAGAGCCCACATAAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 90 bp | ACCAGACCCAAGCCTTCATGCTTGTATAGCAGGCATTTTGCTGACTaGGCCATTTCCACAGTCTTTCTTCTGACTAAAGAACTAATGTAT | + |
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Preference number: 1 (lower is better) Translates to: TRPKPSCLYSRHFAD*AISTVFLLTKELMY Trigger: ATACATTAGTTCTTTAGTCAGAAGAAAGACTGTGGAAATGGCCCAGTCAGCAAAATGCCTGCTATACAAGCATGAAGGCTTGGGTCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 90 bp | ATGGAAAGACTGATATTTGATAAGTATGTATGTGTGAATGATGCGTaGCTGTTTATGTCAAGGTCTGATACATGTCACAGTGAACATGTA | + |
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Preference number: 1 (lower is better) Translates to: MERLIFDKYVCVNDA*LFMSRSDTCHSEHV Trigger: TACATGTTCACTGTGACATGTATCAGACCTTGACATAAACAGCCACGCATCATTCACACATACATACTTATCAAATATCAGTCTTTCCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCAGAGACTTTTTCCATaGTCACAGGAACCAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMQRLFP*SQEPGW Trigger: CCAACCTGGTTCCTGTGATCATGGAAAAAGTCTCTG...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGAATTTATGTGGGCTCTaGAGAGTCTATCTCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMNLCGL*RVYLRP Trigger: GGGTCTGAGATAGACTCTTCAGAGCCCACATAAATT...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGGACAGCCTTAAGCATTaGTCCTTCCCTTTTATCTCC | + |
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Preference number: 2 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRDSLKH*SFPFIS Trigger: GGAGATAAAAGGGAAGGACCAATGCTTAAGGCTGTC...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCAAGGTGATGTCAGATaGGACCAAGTACTTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMQGDVR*DQVLPF Trigger: AAAAGGAAGTACTTGGTCCCATCTGACATCACCTTG...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGTACTGTGGGCTCCACTaGGAGGGTATTCAGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: FLVAESGRSASATYFCVLYCGLH*EGIQDF Trigger: GAAATCCTGAATACCCTCTCAGTGGAGCCCACAGTA...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGCACACACAATTTATGTaGGCTCTGAAGAGTCTATCT | + |
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Preference number: 2 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRHTQFM*ALKSLS Trigger: AGATAGACTCTTCAGAGCCCACATAAATTGTGTGTG...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGTCCCTTTTATCTCCTTaGAAAGAAGGTCTCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRSLLSP*KEGLFE Trigger: CTCAAAGAGACCTTCTTTCCAAGGAGATAAAAGGGA...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 90 bp | CCTCAGCCACATATTTCTGTGTCTTGGCTTTTGCTTGGTTCTGGTTaGTTTGAGCCTTCCCATCTTGGCATTAAAGCTGTAGGAGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: PQPHISVSWLLLGSG*FEPSHLGIKAVGGP Trigger: CGGACCTCCTACAGCTTTAATGCCAAGATGGGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATGTGGCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGGTGGAGGCAATTAGTTaGTGGCAACAGAAATACTCT | + |
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Preference number: 2 (lower is better) Translates to: FLVAESGRSASATYFCVLVEAIS*WQQKYS Trigger: AGAGTATTTCTGTTGCCACCAACTAATTGCCTCCAC...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 90 bp | AAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGGCTTTaGCTTGGTTCTGGTTTGTTTGAGCCTTCCCATCTTGGCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: KAVDLPQPHISVSWL*LGSGLFEPSHLGIK Trigger: TTTAATGCCAAGATGGGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR GCA 90 bp | TTATCTCCTTGGAAAGAAGGTCTCTTTGAGGCTAGTCACTGTGTAGAGCTGGCCGGGATTGTAGATAGTTaGTACCACACACAATTTATG | + |
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Preference number: 2 (lower is better) Translates to: LSPWKEGLFEASHCVELAGIVDS*YHTQFM Trigger: CATAAATTGTGTGTGGTAGCAACTATCTACAATCCC...GGCCAGCTCTACACAGTGACTAGCCTCAAAGAGACCTTCTTTCCAAGGAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTTTCTCGGAGGACAGCTaGATGCTTTTCCTGATCATC | + |
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Preference number: 2 (lower is better) Translates to: RTNVFLQSKELARAERKTFSEDS*MLFLII Trigger: GATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAA...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTGAGGCAATTAGTTGGTaGCAACAGAAATACTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RTNVFLQSKELARAERKTEAISW*QQKYSE Trigger: CTCAGAGTATTTCTGTTGCCACCAACTAATTGCCTC...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 72 bp | AGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTaGTCATCGCAGGAACTGAGCCAAGGTGATGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: RWPSRRTAGCFS*SSQELSQGDVR Trigger: TCTGACATCACCTTGGCTCAGTTCCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR GCA 72 bp | CCTACAACGCTGAAAACTCAGGCCAGAGGGCCACCTTaGTGTGGTTCGTCAGTTTTGGAGTCAGGGTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PTTLKTQARGPP*CGSSVLESGFL Trigger: TAGAAACCCTGACTCCAAAACTGACGAACCACAGCAAGGTGGCCCTCTGGCCTGAGTTTTCAGCGTTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGTGTCTTGGCTTTTGCTaGGTTCTGGTTTGTTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRCLGFC*VLVCLS Trigger: GCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACA...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGTCTGTGTCTTGGCTTTaGCTTGGTTCTGGTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRSVSWL*LGSGLF Trigger: AAACAAACCAGAACCAAGCAAAAGCCAAGACACAGA...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 72 bp | GGACAGCTGGATGCTTTTCCTGATCATCGCAGGAACTaGGCCAAGGTGATGTCAGATGGGACCAAGTACTTC | + |
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Preference number: 3 (lower is better) Translates to: GQLDAFPDHRRN*AKVMSDGTKYF Trigger: GAAGTACTTGGTCCCATCTGACATCACCTTGGCTCAGTTCCTGCGATGATCAGGAAAAGCATCCAGCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR GCA 72 bp | GTGGGCTCTGAAGAGTCTATCTCAGACCCTCACATTTaGATGTCAAGAGCTTTACCACTGAGCCATCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: VGSEESISDPHI*MSRALPLSHLS Trigger: AGAGAGATGGCTCAGTGGTAAAGCTCTTGACATGCAAATGTGAGGGTCTGAGATAGACTCTTCAGAGCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 72 bp | GCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTaGCTTTTGCTTGGTTCTGGTTTGTTTGAGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: AVDLPQPHISVS*LLLGSGLFEPS Trigger: GGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 72 bp | CAGACCCTCACATTTGCATGTCAAGAGCTTTACCACTaGGCCATCTCTCTGGCCTTGACGAAAATGGCATTA | + |
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Preference number: 3 (lower is better) Translates to: QTLTFACQELYH*AISLALTKMAL Trigger: TAATGCCATTTTCGTCAAGGCCAGAGAGATGGCTCAGTGGTAAAGCTCTTGACATGCAAATGTGAGGGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR TCA 72 bp | TTCCAAGTGCATGTCTTTGCATCAGGCTTTTGTGTGTaGGTTCTAAGGACCAGACCCAAGCCTTCATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: FQVHVFASGFCV*VLRTRPKPSCL Trigger: CAAGCATGAAGGCTTGGGTCTGGTCCTTAGAACTCACACACAAAAGCCTGATGCAAAGACATGCACTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 72 bp | TGTACGAGCACTAGTTTCTGTGTGGAGGCAATTAGTTaGTGGCAACAGAAATACTCTGAGTTCCATGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: CTSTSFCVEAIS*WQQKYSEFHGF Trigger: GAAACCATGGAACTCAGAGTATTTCTGTTGCCACCAACTAATTGCCTCCACACAGAAACTAGTGCTCGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 72 bp | ACTGTGGGCTCCACTGAGAGGGTATTCAGGATTTCTTaGAAGTTATATACAAATTATCAGGGCGTGTTAATT | + |
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Preference number: 3 (lower is better) Translates to: TVGSTERVFRIS*KLYTNYQGVLI Trigger: AATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTCTCAGTGGAGCCCACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CCA 72 bp | CTGATATTTGATAAGTATGTATGTGTGAATGATGCGTaGCTGTTTATGTCAAGGTCTGATACATGTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: LIFDKYVCVNDA*LFMSRSDTCHS Trigger: ACTGTGACATGTATCAGACCTTGACATAAACAGCCACGCATCATTCACACATACATACTTATCAAATATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGGGTCATCTGAACTGGTaGGGTCAAGGCAAGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRGHLNW*GQGKQT Trigger: GGTCTGCTTGCCTTGACCTCACCAGTTCAGATGACC...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGAAATGTAGATGGAGATaGCCACTGTGTTCCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMKCRWR*PLCSPG Trigger: TCCCGGGGAACACAGTGGCCATCTCCATCTACATTT...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGGTACTGCATCTTGAATaGGATTTGCTCGTCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMVLHLE*DLLVGA Trigger: TGCACCGACGAGCAAATCTCATTCAAGATGCAGTAC...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CCA 90 bp | GGGACTGTCCTGTCCACAATCAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGGTTTCCCAGAGCACTTaGGTAATCCAGGAAATCCGA | + |
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Preference number: 4 (lower is better) Translates to: GTVLSTIRKVAFSEDSWMVSQST*VIQEIR Trigger: TCGGATTTCCTGGATTACCCAAGTGCTCTGGGAAAC...CATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTGATTGTGGACAGGACAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | GCCTACAACGCTGAAAACTCAGGCCAGAGGGCCACCTaGCTGTGGTTCGTCAGTTTTGGAGTCAGGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AYNAENSGQRAT*LWFVSFGVRVS Trigger: AGAAACCCTGACTCCAAAACTGACGAACCACAGCAAGGTGGCCCTCTGGCCTGAGTTTTCAGCGTTGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | TTATCTCCTTGGAAAGAAGGTCTCTTTGAGGCTAGTCACTGTGTAGAGCTGGCCTGCTGCTGTAGAGGTTaGAGTGGAAGCCGAAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSPWKEGLFEASHCVELACCCRG*SGSRSG Trigger: TCCGCTTCGGCTTCCACTTCAACCTCTACAGCAGCA...GGCCAGCTCTACACAGTGACTAGCCTCAAAGAGACCTTCTTTCCAAGGAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR GCA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGAGTCTCCGAGCCTTCTaGTTAAAGCAGCTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: FLVAESGRSASATYFCVLSLRAF*LKQLWV Trigger: GACCCACAGCTGCTTTAAGCAGAAGGCTCGGAGACT...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | GCTGGGGTTCCAAGTGCATGTCTTTGCATCAGGCTTTaGTGTGTGAGTTCTAAGGACCAGACCCAAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AGVPSACLCIRL*CVSSKDQTQAF Trigger: GAAGGCTTGGGTCTGGTCCTTAGAACTCACACACAAAAGCCTGATGCAAAGACATGCACTTGGAACCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGTGTCACTATCACCAATaGCAGGCAGAAAGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FLVAESGRSASATYFCVLCHYHQ*QAESGG Trigger: GCCACCACTTTCTGCCTGCCATTGGTGATAGTGACA...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGGCCCAGCGAGTTTTCTaGATAGAAAAGCAGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: FLVAESGRSASATYFCVLAQRVF*IEKQLI Trigger: GATGAGCTGCTTTTCTATTCAGAAAACTCGCTGGGC...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCACACACAATTTATGTGGGCTCTGAAGAGTCTATCTCAGACCCTCGAGCAGAATGCCTGCTaGAAGTTATTGCTGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SCYHTQFMWALKSLSQTLEQNAC*KLLLTT Trigger: TGTGGTCAGCAATAACTTCCAGCAGGCATTCTGCTC...GAGGGTCTGAGATAGACTCTTCAGAGCCCACATAAATTGTGTGTGGTAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | GATCTGCCTCAGCCACATATTTCTGTGTCTTGGCTTTaGCTTGGTTCTGGTTTGTTTGAGCCTTCCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: DLPQPHISVSWL*LGSGLFEPSHL Trigger: AAGATGGGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATGTGGCTGAGGCAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | TCCATGATCACAGGAACCAGGTTGGAATACTTTGCTTaGATCTTCGCAGATTCCATGCATCTGAGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SMITGTRLEYFA*IFADSMHLSSR Trigger: CCTGGAACTCAGATGCATGGAATCTGCGAAGATCAAAGCAAAGTATTCCAACCTGGTTCCTGTGATCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCACACACAATTTATGTGGGCTCTGAAGAGTCTATCTCAGACCCTCATGACGGGAAGGTACTaGATCTTGAATGAGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCYHTQFMWALKSLSQTLMTGRY*ILNEIC Trigger: GCAAATCTCATTCAAGATGCAGTACCTTCCCGTCAT...GAGGGTCTGAGATAGACTCTTCAGAGCCCACATAAATTGTGTGTGGTAGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | GAGCCAGAGACTTTTTCCATGATCACAGGAACCAGGTaGGAATACTTTGCTTTGATCTTCGCAGATTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EPETFSMITGTR*EYFALIFADSM Trigger: CATGGAATCTGCGAAGATCAAAGCAAAGTATTCCAACCTGGTTCCTGTGATCATGGAAAAAGTCTCTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTTCTCGATGGAGCAGCTaGTTGAAAGCAGGCGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RTNVFLQSKELARAERKTSRWSS*LKAGEI Trigger: AATCTCGCCTGCTTTCAATCAGCTGCTCCATCGAGA...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR GCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTAGATTTGCTCGTCGGTaGAGTTTCCCAGAGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTNVFLQSKELARAERKTRFARR*SFPEHL Trigger: CAAGTGCTCTGGGAAACTGCACCGACGAGCAAATCT...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | GAGGGTATTCAGGATTTCTTGGAAGTTATATACAAATTATCAGGGCGTGTTAATTGGCATAGTAATGGATaGGGAACGGGAGGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGIQDFLEVIYKLSGRVNWHSNG*GTGGWS Trigger: TGACCAGCCTCCCGTTCCTCATCCATTACTATGCCA...ATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | GAGGGTATTCAGGATTTCTTGGAAGTTATATACAAATTATCAGGGCGTGTTAATTCCGGGTGGTTGATGTaGTCAGGAAAGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGIQDFLEVIYKLSGRVNSGWLM*SGKSWA Trigger: TGCCCATGACTTTCCTGATCACATCAACCACCCGGA...ATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| 3UTR CAA 72 bp | CATATTTCTGTGTCTTGGCTTTTGCTTGGTTCTGGTTaGTTTGAGCCTTCCCATCTTGGCATTAAAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HISVSWLLLGSG*FEPSHLGIKAV Trigger: TACAGCTTTAATGCCAAGATGGGAAGGCTCAAACAAACCAGAACCAAGCAAAAGCCAAGACACAGAAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | GAGGGTATTCAGGATTTCTTGGAAGTTATATACAAATTATCAGGGCGTGTTAATGAGATTCGATCCGAATaGCCCTCAAGATGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIQDFLEVIYKLSGRVNEIRSE*PSRCGR Trigger: CCTTCCACATCTTGAGGGTCATTCGGATCGAATCTC...ATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR TCA 90 bp | GAGGGTATTCAGGATTTCTTGGAAGTTATATACAAATTATCAGGGCGTGTTAATGATGGAGCAGCTGATTaGAAGCAGGCGAGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGIQDFLEVIYKLSGRVNDGAAD*KQARFD Trigger: ATCGAATCTCGCCTGCTTTCAATCAGCTGCTCCATC...ATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR GCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTCACTATAGAGCAGAATaGCTGCTGGAAGTTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTNVFLQSKELARAERKTHYRAE*LLEVIA Trigger: AGCAATAACTTCCAGCAGGCATTCTGCTCTATAGTG...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CCA 90 bp | AGAACTAATGTATTCCTTCAGTCTAAAGAGCTAGCCAGAGCTGAAAGGAAAACTATGACCCTCAAGATGTaGAAGGGTAAGAAACATATA | + |
|
Preference number: 4 (lower is better) Translates to: RTNVFLQSKELARAERKTMTLKM*KGKKHI Trigger: TATATGTTTCTTACCCTTCCACATCTTGAGGGTCAT...AGTTTTCCTTTCAGCTCTGGCTAGCTCTTTAGACTGAAGGAATACATTAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGTGGCCTTCTCGGAGGACAGCTGGATGCTTTTCCTGATCATCGCAGGAGGTTGCCAAAGGTGTaGAGAGCAGCTAATGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QEGGLLGGQLDAFPDHRRRLPKV*RAANGL Trigger: TAGACCATTAGCTGCTCTCAACACCTTTGGCAACCT...CCTGCGATGATCAGGAAAAGCATCCAGCTGTCCTCCGAGAAGGCCACCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 90 bp | GGCTGTCAAAATGAGATTGTACCACTTGATAGTAGTGAGGTCATCTaGACTGGTGAGGTCAAGGCAAGCAGACCTATTGGTCCGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCQNEIVPLDSSEVI*TGEVKASRPIGPGG Trigger: ACCACCCGGACCAATAGGTCTGCTTGCCTTGACCTCACCAGTTCAGATGACCTCACTACTATCAAGTGGTACAATCTCATTTTGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | TTATCTCCTTGGAAAGAAGGTCTCTTTGAGGCTAGTCACTGTGTAGAGCTGGCCAGTTTCCCAGAGCACTaGGGTAATCCAGGAAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSPWKEGLFEASHCVELASFPEH*GNPGNP Trigger: CGGATTTCCTGGATTACCCAAGTGCTCTGGGAAACT...GGCCAGCTCTACACAGTGACTAGCCTCAAAGAGACCTTCTTTCCAAGGAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGGGAAGGTACTGCATCTaGAATGAGATTTGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FLVAESGRSASATYFCVLGRYCI*NEICSS Trigger: CGACGAGCAAATCTCATTCAAGATGCAGTACCTTCC...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCACACACAATTTATGTGGGCTCTGAAGAGTCTATCTCAGACCCTCAGGTCCCCACTGGCTTaGCATCTCACTATAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCYHTQFMWALKSLSQTLRSPLA*HLTIEQ Trigger: CTGCTCTATAGTGAGATGCAAAGCCAGTGGGGACCT...GAGGGTCTGAGATAGACTCTTCAGAGCCCACATAAATTGTGTGTGGTAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 90 bp | AACAATGTAAGCTTCGTGGATGTGACTCTCGATGGAGCAGCTGATTaGAAGCAGGCGAGATTCGATCCGAATGACCCTCAAGATGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NNVSFVDVTLDGAAD*KQARFDPNDPQDVE Trigger: TTCCACATCTTGAGGGTCATTCGGATCGAATCTCGCCTGCTTTCAATCAGCTGCTCCATCGAGAGTCACATCCACGAAGCTTACATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS GCA 90 bp | TCAAGGTCCCCACTGGCTTTGCATCTCACTATAGAGCAGAATGCCTaGTGGAAGTTATTGCTGACCACAACATATAACAGCAGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSPLALHLTIEQNA*WKLLLTTTYNSRLP Trigger: TGGCAACCTGCTGTTATATGTTGTGGTCAGCAATAACTTCCAGCAGGCATTCTGCTCTATAGTGAGATGCAAAGCCAGTGGGGACCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CCA 90 bp | AGGTCCCCACTGGCTTTGCATCTCACTATAGAGCAGAATGCCTGCTaGAAGTTATTGCTGACCACAACATATAACAGCAGGTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPLALHLTIEQNAC*KLLLTTTYNSRLPK Trigger: CTTTGGCAACCTGCTGTTATATGTTGTGGTCAGCAATAACTTCCAGCAGGCATTCTGCTCTATAGTGAGATGCAAAGCCAGTGGGGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | TTATCTCCTTGGAAAGAAGGTCTCTTTGAGGCTAGTCACTGTGTAGAGCTGGCCCCGAAGCGGATGAACTaGCACATGAAATCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPWKEGLFEASHCVELAPKRMN*HMKSPK Trigger: CTTTGGAGATTTCATGTGCAAGTTCATCCGCTTCGG...GGCCAGCTCTACACAGTGACTAGCCTCAAAGAGACCTTCTTTCCAAGGAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCACACACAATTTATGTGGGCTCTGAAGAGTCTATCTCAGACCCTCACTGTCTTTCTTTCCTaGTTCAAGGTCCCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCYHTQFMWALKSLSQTLTVFLS*FKVPTG Trigger: GCCAGTGGGGACCTTGAACAAGGAAAGAAAGACAGT...GAGGGTCTGAGATAGACTCTTCAGAGCCCACATAAATTGTGTGTGGTAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | TTCCTGGTGGCAGAAAGCGGTAGATCTGCCTCAGCCACATATTTCTGTGTCTTGATGAGATTGTACCACTaGATAGTAGTGAGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLVAESGRSASATYFCVLMRLYH*IVVRSS Trigger: AGATGACCTCACTACTATCAAGTGGTACAATCTCAT...CAAGACACAGAAATATGTGGCTGAGGCAGATCTACCGCTTTCTGCCACCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CCA 90 bp | CAGGGTACTGATAATTGTCGTGTAGCAAAGTGTCACTATCACCAATaGCAGGCAGAAAGTGGTGGCTGTCAAAATGAGATTGTACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QGTDNCRVAKCHYHQ*QAESGGCQNEIVPL Trigger: AAGTGGTACAATCTCATTTTGACAGCCACCACTTTCTGCCTGCCATTGGTGATAGTGACACTTTGCTACACGACAATTATCAGTACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS-3UTR CAA 90 bp | GAGGGTATTCAGGATTTCTTGGAAGTTATATACAAATTATCAGGGCGTGTTAATGCCTGCTGGAAGTTATaGCTGACCACAACATATAAC | + |
|
Preference number: 5 (lower is better) Translates to: EGIQDFLEVIYKLSGRVNACWKL*LTTTYN Trigger: GTTATATGTTGTGGTCAGCAATAACTTCCAGCAGGC...ATTAACACGCCCTGATAATTTGTATATAACTTCCAAGAAATCCTGAATACCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 72 bp | GAGGTCAAGGCAAGCAGACCTATTGGTCCGGGTGGTTaGTGTGATCAGGAAAGTCATGGGCATGACAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: EVKASRPIGPGG*CDQESHGHDSY Trigger: GTAGCTGTCATGCCCATGACTTTCCTGATCACATCAACCACCCGGACCAATAGGTCTGCTTGCCTTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 90 bp | GTAGTGAGGTCATCTGAACTGGTGAGGTCAAGGCAAGCAGACCTATaGGTCCGGGTGGTTGATGTGATCAGGAAAGTCATGGGCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: VVRSSELVRSRQADL*VRVVDVIRKVMGMT Trigger: TGTCATGCCCATGACTTTCCTGATCACATCAACCACCCGGACCAATAGGTCTGCTTGCCTTGACCTCACCAGTTCAGATGACCTCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 72 bp | AGCTTCGTGGATGTGACTCTCGATGGAGCAGCTGATTaGAAGCAGGCGAGATTCGATCCGAATGACCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SFVDVTLDGAAD*KQARFDPNDPQ Trigger: TTGAGGGTCATTCGGATCGAATCTCGCCTGCTTTCAATCAGCTGCTCCATCGAGAGTCACATCCACGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 72 bp | ATGAGATTTGCTCGTCGGTGCAGTTTCCCAGAGCACTaGGGTAATCCAGGAAATCCGAATCACTGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MRFARRCSFPEH*GNPGNPNHWLD Trigger: GTCCAGCCAGTGATTCGGATTTCCTGGATTACCCAAGTGCTCTGGGAAACTGCACCGACGAGCAAATCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 72 bp | CAAAGATCCAGTTTTCACCACTGGCATAGTAATGGATaGGGAACGGGAGGCTGGTCAGATACAGCAAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRSSFHHWHSNG*GTGGWSDTASP Trigger: CGGACTTGCTGTATCTGACCAGCCTCCCGTTCCTCATCCATTACTATGCCAGTGGTGAAAACTGGATCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 72 bp | TCATCTGAACTGGTGAGGTCAAGGCAAGCAGACCTATaGGTCCGGGTGGTTGATGTGATCAGGAAAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSELVRSRQADL*VRVVDVIRKVM Trigger: CATGACTTTCCTGATCACATCAACCACCCGGACCAATAGGTCTGCTTGCCTTGACCTCACCAGTTCAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 72 bp | GATGCTATAGATGACGGGAAGGTACTGCATCTTGAATaGGATTTGCTCGTCGGTGCAGTTTCCCAGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: DAIDDGKVLHLE*DLLVGAVSQST Trigger: AGTGCTCTGGGAAACTGCACCGACGAGCAAATCTCATTCAAGATGCAGTACCTTCCCGTCATCTATAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 90 bp | AATGGCAGGCAGAAAGTGGTGGCTGTCAAAATGAGATTGTACCACTaGATAGTAGTGAGGTCATCTGAACTGGTGAGGTCAAGGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: NGRQKVVAVKMRLYH*IVVRSSELVRSRQA Trigger: TGCTTGCCTTGACCTCACCAGTTCAGATGACCTCACTACTATCAAGTGGTACAATCTCATTTTGACAGCCACCACTTTCTGCCTGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 90 bp | ACTATCACCAATGGCAGGCAGAAAGTGGTGGCTGTCAAAATGAGATaGTACCACTTGATAGTAGTGAGGTCATCTGAACTGGTGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TITNGRQKVVAVKMR*YHLIVVRSSELVRS Trigger: TGACCTCACCAGTTCAGATGACCTCACTACTATCAAGTGGTACAATCTCATTTTGACAGCCACCACTTTCTGCCTGCCATTGGTGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS TCA 72 bp | AATGAGATTGTACCACTTGATAGTAGTGAGGTCATCTaGACTGGTGAGGTCAAGGCAAGCAGACCTATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: NEIVPLDSSEVI*TGEVKASRPIG Trigger: ACCAATAGGTCTGCTTGCCTTGACCTCACCAGTTCAGATGACCTCACTACTATCAAGTGGTACAATCTCATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 72 bp | CAGAAAGTGGTGGCTGTCAAAATGAGATTGTACCACTaGATAGTAGTGAGGTCATCTGAACTGGTGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QKVVAVKMRLYH*IVVRSSELVRS Trigger: TGACCTCACCAGTTCAGATGACCTCACTACTATCAAGTGGTACAATCTCATTTTGACAGCCACCACTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CAA 72 bp | CATCTCACTATAGAGCAGAATGCCTGCTGGAAGTTATaGCTGACCACAACATATAACAGCAGGTTGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLTIEQNACWKL*LTTTYNSRLPK Trigger: CTTTGGCAACCTGCTGTTATATGTTGTGGTCAGCAATAACTTCCAGCAGGCATTCTGCTCTATAGTGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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| CDS CCA 72 bp | GATAATTGTCGTGTAGCAAAGTGTCACTATCACCAATaGCAGGCAGAAAGTGGTGGCTGTCAAAATGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: DNCRVAKCHYHQ*QAESGGCQNEI Trigger: AATCTCATTTTGACAGCCACCACTTTCTGCCTGCCATTGGTGATAGTGACACTTTGCTACACGACAATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058213.6 |
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