Pregenerated sensors for OXCT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076438Ensembl transcript IDs: ENSMUST00000102648.6
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCTACCGACGAGCCCTCCCACAGCTCCACCAGCGTCAGCCCCTTTaGGTGGTTCACTTCAAACACCGCCTTCTCAGTGATGATGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: IYRRALPQLHQRQPL*VVHFKHRLLSDDEV Trigger: GACCTCATCATCACTGAGAAGGCGGTGTTTGAAGTGAACCACTCAAAGGGGCTGACGCTGGTGGAGCTGTGGGAGGGCTCGTCGGTAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102648.6 |
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| CDS TCA 72 bp | CGAGCCCTCCCACAGCTCCACCAGCGTCAGCCCCTTTaGGTGGTTCACTTCAAACACCGCCTTCTCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RALPQLHQRQPL*VVHFKHRLLSD Trigger: ATCACTGAGAAGGCGGTGTTTGAAGTGAACCACTCAAAGGGGCTGACGCTGGTGGAGCTGTGGGAGGGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102648.6 |
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| CDS CAA 72 bp | ACATTGAAGTTGCGCGCGCTGCCTCTGAAGATCACGTaGCCCGAGCGGTCGGCTTTCCAGCCCTTGATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TLKLRALPLKIT*PERSAFQPLIS Trigger: ACTGATCAAGGGCTGGAAAGCCGACCGCTCGGGCAACGTGATCTTCAGAGGCAGCGCGCGCAACTTCAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102648.6 |
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| CDS CCA 72 bp | CCCTCCCACAGCTCCACCAGCGTCAGCCCCTTTGAGTaGTTCACTTCAAACACCGCCTTCTCAGTGATGATG | + |
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Preference number: 6 (lower is better) Translates to: PSHSSTSVSPFE*FTSNTAFSVMM Trigger: CATCATCACTGAGAAGGCGGTGTTTGAAGTGAACCACTCAAAGGGGCTGACGCTGGTGGAGCTGTGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102648.6 |
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| CDS TCA 72 bp | CGTTTTCACTGTGCAGGTAGACGGTCATCTTGGGGCTaGTGTAGTTGCTCGCCAAGACAGGGATCCCGATGC | + |
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Preference number: 6 (lower is better) Translates to: RFHCAGRRSSWG*CSCSPRQGSRC Trigger: GCATCGGGATCCCTGTCTTGGCGAGCAACTACATCAGCCCCAAGATGACCGTCTACCTGCACAGTGAAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102648.6 |
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