Pregenerated sensors for OXCT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022186Ensembl transcript IDs: ENSMUST00000110690.9, ENSMUST00000138927.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGAGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCTACTTCTaGGGAAGCATCCCTGATGAATGCAAGCTACTGCATTCACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SGVMPPGNCLYCGYF*GSIPDECKLLHSLC Trigger: GCAGAGTGAATGCAGTAGCTTGCATTCATCAGGGATGCTTCCTCAGAAGTAGCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR GCA 90 bp | TACGTTTCACTGTGCAGACGCCAGCTGTCCAGTCTGGCTTCAGGGTaGCTAGGTTTTCAGATATCTGATACCAAGGCAAGGAAGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: YVSLCRRQLSSLASG*LGFQISDTKARKLL Trigger: CAGAAGCTTCCTTGCCTTGGTATCAGATATCTGAAAACCTAGGCACCCTGAAGCCAGACTGGACAGCTGGCGTCTGCACAGTGAAACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR TCA 90 bp | TACTGCATTCACTCTGCCACACAAACCCTGCTAGCCACTCAGATCTaGGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: YCIHSATQTLLATQI*AFPIISPAQIRLKQ Trigger: CTGCTTTAGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCTCAGATCTGAGTGGCTAGCAGGGTTTGTGTGGCAGAGTGAATGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR TCA 90 bp | CTAGGTTTTCAGATATCTGATACCAAGGCAAGGAAGCTTCTGGAGTaGTGCCCCCTGGCAACTGTCTGTATTGTGGCTACTTCTGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LGFQISDTKARKLLE*CPLATVCIVATSEE Trigger: TTCCTCAGAAGTAGCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTGGTATCAGATATCTGAAAACCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR CCA 90 bp | AGCAAGATGATTTCTCAAATGTGTGCTCTAACATACGTACTCTCCTaGGCCTTGTACCATCTAAGACGGGTTCTTCTTACCAACACTGGC | + |
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Preference number: 1 (lower is better) Translates to: SKMISQMCALTYVLS*ALYHLRRVLLTNTG Trigger: GCCAGTGTTGGTAAGAAGAACCCGTCTTAGATGGTACAAGGCCCAGGAGAGTACGTATGTTAGAGCACACATTTGAGAAATCATCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR GCA 90 bp | TTGTCTATTCAGGCTTTGAAGTTTAAGACATTCTTAGAAGCCCCTTaGGTTAAAGTAACAGACCGGAATGATAAGCAAGTGCGCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSIQALKFKTFLEAP*VKVTDRNDKQVRLK Trigger: CTTCAGGCGCACTTGCTTATCATTCCGGTCTGTTACTTTAACGCAAGGGGCTTCTAAGAATGTCTTAAACTTCAAAGCCTGAATAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR CCA 90 bp | ACAATCTTTGCTGAGCAGAATGGAGAGGCTAAAGGGGAGATATCTTaGAATATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: TIFAEQNGEAKGEIS*NIISLNTAVTMIQD Trigger: GTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATATTCCAAGATATCTCCCCTTTAGCCTCTCCATTCTGCTCAGCAAAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCTACTTCTGAGGAAGCATCCCACTGATATATCACGATaGAGAGAACAATGTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: SDAPWQLSVLWLLLRKHPTDISR*REQCLW Trigger: CCATAGACATTGTTCTCTCCATCGTGATATATCAGT...GGGATGCTTCCTCAGAAGTAGCCACAATACAGACAGTTGCCAGGGGGCATCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR CAA 90 bp | ATGATTTCTCAAATGTGTGCTCTAACATACGTACTCTCCTGGGCCTaGTACCATCTAAGACGGGTTCTTCTTACCAACACTGGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: MISQMCALTYVLSWA*YHLRRVLLTNTGRG Trigger: TCCTCTGCCAGTGTTGGTAAGAAGAACCCGTCTTAGATGGTACAAGGCCCAGGAGAGTACGTATGTTAGAGCACACATTTGAGAAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTAAAGCAGTAGCCCTTTGTTTGAAAATGCAATCTTaGCAGCCTGGGACAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: SLSHHFPSTDKAKAVALCLKMQS*QPGTNV Trigger: AACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAA...ACAAAGGGCTACTGCTTTAGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR-3UTR CCA 90 bp | GATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTGCAATCTTGGCAGCCTaGGACAAATGTTCAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: DISRWREQCLWLHKSRNTAILAA*DKCSVD Trigger: ATCCACTGAACATTTGTCCCAGGCTGCCAAGATTGC...AGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| 3UTR-3UTR TCA 90 bp | TATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGACTCATGATCAATTGCAATCACAAATGCACATaGAAATTCACCTTCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: YHLFKYCCHYDSGLMINCNHKCT*KFTFRA Trigger: AGCCCTGAAGGTGAATTTTCATGTGCATTTGTGATT...GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR-3UTR TCA 90 bp | TATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGACTCATGATCAATTGCTTAAATCCTATGTGTTaGAAATGCAATCTTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YHLFKYCCHYDSGLMINCLNPMC*KCNLGS Trigger: GCTGCCAAGATTGCATTTTCAACACATAGGATTTAA...GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR TCA 72 bp | CACTCTGCCACACAAACCCTGCTAGCCACTCAGATCTaGGCCTTTCCCATCATTTCCCCAGCACAGATAAGG | + |
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Preference number: 3 (lower is better) Translates to: HSATQTLLATQI*AFPIISPAQIR Trigger: CCTTATCTGTGCTGGGGAAATGATGGGAAAGGCTCAGATCTGAGTGGCTAGCAGGGTTTGTGTGGCAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR TCA 72 bp | CAGTCTGGCTTCAGGGTGCCTAGGTTTTCAGATATCTaGTACCAAGGCAAGGAAGCTTCTGGAGTGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: QSGFRVPRFSDI*YQGKEASGVMP Trigger: GGGCATCACTCCAGAAGCTTCCTTGCCTTGGTATCAGATATCTGAAAACCTAGGCACCCTGAAGCCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR GCA 72 bp | AGCATCCCTGATGAATGCAAGCTACTGCATTCACTCTaGCACACAAACCCTGCTAGCCACTCAGATCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: SIPDECKLLHSL*HTNPASHSDLS Trigger: GCTCAGATCTGAGTGGCTAGCAGGGTTTGTGTGGCAGAGTGAATGCAGTAGCTTGCATTCATCAGGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR TCA 72 bp | CAGATATCTGATACCAAGGCAAGGAAGCTTCTGGAGTaGTGCCCCCTGGCAACTGTCTGTATTGTGGCTACT | + |
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Preference number: 3 (lower is better) Translates to: QISDTKARKLLE*CPLATVCIVAT Trigger: AGTAGCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTGGTATCAGATATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR CCA 72 bp | GTTTTCAGATATCTGATACCAAGGCAAGGAAGCTTCTaGAGTGATGCCCCCTGGCAACTGTCTGTATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: VFRYLIPRQGSF*SDAPWQLSVLW Trigger: CCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTGGTATCAGATATCTGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR CCA 72 bp | ATTTCTCAAATGTGTGCTCTAACATACGTACTCTCCTaGGCCTTGTACCATCTAAGACGGGTTCTTCTTACC | + |
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Preference number: 3 (lower is better) Translates to: ISQMCALTYVLS*ALYHLRRVLLT Trigger: GGTAAGAAGAACCCGTCTTAGATGGTACAAGGCCCAGGAGAGTACGTATGTTAGAGCACACATTTGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR GCA 72 bp | CAGGCTTTGAAGTTTAAGACATTCTTAGAAGCCCCTTaGGTTAAAGTAACAGACCGGAATGATAAGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: QALKFKTFLEAP*VKVTDRNDKQV Trigger: CACTTGCTTATCATTCCGGTCTGTTACTTTAACGCAAGGGGCTTCTAAGAATGTCTTAAACTTCAAAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| 3UTR GCA 72 bp | AGGGGAGATATCTTGGAATATCATCTCTTTAAATACTaGTGTCACTATGATTCAGGACTCATGATCAATTGC | + |
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Preference number: 3 (lower is better) Translates to: RGDILEYHLFKY*CHYDSGLMINC Trigger: GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATATTCCAAGATATCTCCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | CAAGGCAAGGAAGCTTCTGGAGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCATTGCCTGCCCGGTCTaGTTTCCATGCTTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: QGKEASGVMPPGNCLYCGIACPV*FPCFHQ Trigger: CTGGTGAAAGCATGGAAAGCAGACCGGGCAGGCAAT...GCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR TCA 90 bp | CAAGGCAAGGAAGCTTCTGGAGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCTGGCATGAGGTTTGGTaGAACTGCAAAGTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGKEASGVMPPGNCLYCGWHEVW*NCKVTA Trigger: GGCTGTGACTTTGCAGTTTCACCAAACCTCATGCCA...GCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | GATTTCTCAAATGTGTGCTCTAACATACGTACTCTCCTGGGCCTTGTACCATCTCAGACACACCCCTTATaGAGGGCGCCCCGCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: DFSNVCSNIRTLLGLVPSQTHPL*RAPREL Trigger: CAGCTCGCGGGGCGCCCTGCATAAGGGGTGTGTCTG...AGATGGTACAAGGCCCAGGAGAGTACGTATGTTAGAGCACACATTTGAGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | GCTAGCCACTCAGATCTGAGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTTCACCTCTCGTGGCTTaGTGGCAATGGCAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: ASHSDLSLSHHFPSTDKASPLVA*WQWQHC Trigger: GCAGTGTTGCCATTGCCAGCAAGCCACGAGAGGTGA...AGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCTCAGATCTGAGTGGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTAAAGCAGTAGCCCTTTGTGAGTCCCATACCCTGTaGTGGTGTAGAAGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLSHHFPSTDKAKAVALCESHTL*WCRRQG Trigger: TCCCTGCCTTCTACACCAGCACAGGGTATGGGACTC...ACAAAGGGCTACTGCTTTAGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR TCA 90 bp | AGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTAAAGCAGTAGCCCTTTGTCAGAGTGCTCCATGGTaGCCACCACTTTGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLSHHFPSTDKAKAVALCQSAPW*PPLWFW Trigger: CCAAAACCAAAGTGGTGGTCACCATGGAGCACTCTG...ACAAAGGGCTACTGCTTTAGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGCAGACACACCCCTTATaGAGGGCGCCCCGCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQQTHPL*RAPREL Trigger: CAGCTCGCGGGGCGCCCTGCATAAGGGGTGTGTCTG...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTCCTCTCGGCAAGTGTaGCCTGAGGTGTCAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: DILPFKSYVLKMQSWQPGSSRQV*PEVSAL Trigger: TAGAGCTGACACCTCAGGGCACACTTGCCGAGAGGA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCAAGGAAGCTTCTGGAGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCTTCGTTTTATCTGCTTaGATCGAAGTAAAAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QGKEASGVMPPGNCLYCGFVLSA*IEVKGP Trigger: TGGGCCTTTTACTTCGATCCAAGCAGATAAAACGAA...GCCACAATACAGACAGTTGCCAGGGGGCATCACTCCAGAAGCTTCCTTGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR CCA 90 bp | GCTAGCCACTCAGATCTGAGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTGAAGAAAGAGGCTCCTaGGAGAACAGTAACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ASHSDLSLSHHFPSTDKAEERGS*ENSNCF Trigger: GAAACAGTTACTGTTCTCCCAGGAGCCTCTTTCTTC...AGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCTCAGATCTGAGTGGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR TCA 90 bp | GCTAGCCACTCAGATCTGAGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTTGCACATTGGCAGATTaGAGTTTCTTGCACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASHSDLSLSHHFPSTDKACTLAD*SFLHFS Trigger: GGAAAAGTGCAAGAAACTTCAATCTGCCAATGTGCA...AGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCTCAGATCTGAGTGGCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR GCA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTTTCCCTTCGCAGAGTaGTCCATGGTGACCACCACT | + |
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Preference number: 4 (lower is better) Translates to: DILPFKSYVLKMQSWQPGFPFAE*SMVTTT Trigger: AGTGGTGGTCACCATGGAGCACTCTGCGAAGGGAAA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CCA 90 bp | GAACTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAACCTCTCGTGGCTTGCTaGCAATGGCAACACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELIYHDGENNVYGCTNPEPLVAC*QWQHCH Trigger: ATGGCAGTGTTGCCATTGCCAGCAAGCCACGAGAGG...TTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CCA 90 bp | CTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTCCCTCACCTCTCGTaGCTTGCTGGCAATGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LIYHDGENNVYGCTNPEILPHLS*LAGNGN Trigger: GTTGCCATTGCCAGCAAGCCACGAGAGGTGAGGGAG...TATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | CTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATATCCTCTCGGCAAGTGTaGCCTGAGGTGTCAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LIYHDGENNVYGCTNPEISSRQV*PEVSAL Trigger: TAGAGCTGACACCTCAGGGCACACTTGCCGAGAGGA...TATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | TGTCTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTGAGTCCCATACCCTGTaGTGGTGTAGAAGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CLWLHKSRNTRRKLAETSESHTL*WCRRQG Trigger: TCCCTGCCTTCTACACCAGCACAGGGTATGGGACTC...AGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | CTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATATCACCTCTCGTGGCTTaGTGGCAATGGCAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: LIYHDGENNVYGCTNPEISPLVA*WQWQHC Trigger: GCAGTGTTGCCATTGCCAGCAAGCCACGAGAGGTGA...TATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | CTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTTGCATTGCCTGCCCGGTCTaGTTTCCATGCTTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LWLHKSRNTRRKLAETSCIACPV*FPCFHQ Trigger: CTGGTGAAAGCATGGAAAGCAGACCGGGCAGGCAAT...GCAAGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | CTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTTGCCACCACGGTAGTTCCTaGAGCTTTGCACATTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LWLHKSRNTRRKLAETSCHHGSS*SFAHWQ Trigger: CTGCCAATGTGCAAAGCTGCAGGAACTACCGTGGTG...GCAAGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | GAACTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAATTTCCCTTCGCAGAGTaGTCCATGGTGACCACCACT | + |
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Preference number: 4 (lower is better) Translates to: ELIYHDGENNVYGCTNPEFPFAE*SMVTTT Trigger: AGTGGTGGTCACCATGGAGCACTCTGCGAAGGGAAA...TTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CCA 90 bp | GATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTCCTCTCGTGGCTTGCTaGCAATGGCAACACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DISRWREQCLWLHKSRNTPLVAC*QWQHCH Trigger: ATGGCAGTGTTGCCATTGCCAGCAAGCCACGAGAGG...AGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR TCA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTTCTTGCACTTTTCCTaGAAATCACATTGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DILPFKSYVLKMQSWQPGFLHFS*KSHCLP Trigger: GGGCAGGCAATGTGATTTTCAGGAAAAGTGCAAGAA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR TCA 90 bp | TGTCTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTCAGAGTGCTCCATGGTaGCCACCACTTTGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: CLWLHKSRNTRRKLAETSQSAPW*PPLWFW Trigger: CCAAAACCAAAGTGGTGGTCACCATGGAGCACTCTG...AGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCCCATCATTTCCCCAGCACAGATAAGGCTAAAGCAGTAGCCCTTTGTACCAACCAGCAAGGTTaGACCATTAGGAATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLSHHFPSTDKAKAVALCTNQQG*TIRNIF Trigger: AAAGATATTCCTAATGGTGCAACCTTGCTGGTTGGT...ACAAAGGGCTACTGCTTTAGCCTTATCTGTGCTGGGGAAATGATGGGAAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR CCA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTGGCTTGCTGGCAATaGCAACACTGCCATCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNVACWQ*QHCHLC Trigger: ACAAAGATGGCAGTGTTGCCATTGCCAGCAAGCCAC...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CCA 90 bp | TCGAGGTTTAATACATATAGCATAAAAGATGAGCATATATCCACTGTGAGCAACCTCCCTCACCTCTCGTaGCTTGCTGGCAATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRFNTYSIKDEHISTVSNLPHLS*LAGNGN Trigger: GTTGCCATTGCCAGCAAGCCACGAGAGGTGAGGGAG...GTTGCTCACAGTGGATATATGCTCATCTTTTATGCTATATGTATTAAACCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGCACCAGCAGAGCATATGCCTTGTCCTTTCTTCTACTTACTTTTCACATCTAATCATGGCGAATaGCTCATCGCTGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSAPAEHMPCPFFYLLFTSNHGE*LIAGEE Trigger: TTCTTCTCCAGCGATGAGTCATTCGCCATGATTAGA...TGTGAAAAGTAAGTAGAAGAAAGGACAAGGCATATGCTCTGCTGGTGCTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACATCTGCTGCATTGGCATaGGGTTTGGTGAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPFKSYVLKMQSWQPGTSAALA*GLVKPF Trigger: AAAAGGTTTCACCAAACCTCATGCCAATGCAGCAGA...TGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATCAGGCTTACCGGATTTaGCTTTTCCATCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNQAYRI*LFHLLP Trigger: AGGAAGGAGATGGAAAAGGCAAATCCGGTAAGCCTG...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGCGAATGACTCATCGCTaGAGAAGAAAGAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQRMTHR*RRKRLL Trigger: CAGGAGCCTCTTTCTTCTCCAGCGATGAGTCATTCG...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATCCCCTGCATTGTTGCTaGCTGCAGTTAGATCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNPLHCC*LQLDLL Trigger: TAAAAGATCTAACTGCAGTCAGCAACAATGCAGGGG...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | ACTGACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTCCCCTGCATTGTTGCTaGCTGCAGTTAGATCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDILPFKSYVLKMQSWQPPLHCC*LQLDLL Trigger: TAAAAGATCTAACTGCAGTCAGCAACAATGCAGGGG...AGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | CTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTTGCGTTATATTTGATGGGTaGTCCTCCTTCCTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLHKSRNTRRKLAETSCVIFDG*SSFLYQ Trigger: CTGGTACAGGAAGGAGGATCACCCATCAAATATAAC...GCAAGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | ACTGACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGTTATATTTGATGGGTaGTCCTCCTTCCTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDILPFKSYVLKMQSWQPVIFDG*SSFLYQ Trigger: CTGGTACAGGAAGGAGGATCACCCATCAAATATAAC...AGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACATTCTCCATGATTTTATaGGCATTTCCCTTCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPFKSYVLKMQSWQPGTFSMIL*AFPFAE Trigger: CTCTGCGAAGGGAAATGCTCATAAAATCATGGAGAA...TGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGTGGATTTCTCCATGATTTTATaGGCATTTCCCTTCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCVENAILAAWDKCSVDFSMIL*AFPFAE Trigger: CTCTGCGAAGGGAAATGCTCATAAAATCATGGAGAA...ATCCACTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTGTCTATTCAGGCTTTGAAGTTTAAGACATTCTTAGAAGCCCCTTGCGTTTCTGCTGCATTGGCATaGGGTTTGGTGAAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLSIQALKFKTFLEAPCVSAALA*GLVKLQ Trigger: TTGCAGTTTCACCAAACCTCATGCCAATGCAGCAGA...AACGCAAGGGGCTTCTAAGAATGTCTTAAACTTCAAAGCCTGAATAGACAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR GCA 90 bp | GATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTGAAGTTGTCAACCCCTaGATTGTTGCTGACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DISRWREQCLWLHKSRNTEVVNP*IVADCS Trigger: ACTGCAGTCAGCAACAATGCAGGGGTTGACAACTTC...AGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | TATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGACTCATGATCAATTGCCACCACGGTAGTTCCTaGAGCTTTGCACATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHLFKYCCHYDSGLMINCHHGSS*SFAHWQ Trigger: CTGCCAATGTGCAAAGCTGCAGGAACTACCGTGGTG...GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGCAGGCTTACCGGATTTaGCTTTTCCATCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQQAYRI*LFHLLP Trigger: AGGAAGGAGATGGAAAAGGCAAATCCGGTAAGCCTG...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGCACCAGCAGAGCATATGCCTTGTCCTTTCTTCTACTTACTTTTCACACAAGTTGAAATCTGCTaGATTGGCATGAGGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSAPAEHMPCPFFYLLFTQVEIC*IGMRFG Trigger: ACCAAACCTCATGCCAATGCAGCAGATTTCAACTTG...TGTGAAAAGTAAGTAGAAGAAAGGACAAGGCATATGCTCTGCTGGTGCTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CCA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTTCGTTTTATCTGCTTaGATCGAAGTAAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DILPFKSYVLKMQSWQPGFVLSA*IEVKGP Trigger: TGGGCCTTTTACTTCGATCCAAGCAGATAAAACGAA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGTCTAATCATGGCGAATaGCTCATCGCTGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQSNHGE*LIAGEE Trigger: TTCTTCTCCAGCGATGAGTCATTCGCCATGATTAGA...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAACCAACCAGCAAGGTTaGACCATTAGGAATATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPFKSYVLKMQSWQPGTTNQQG*TIRNIF Trigger: AAAGATATTCCTAATGGTGCAACCTTGCTGGTTGGT...TGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATAACTGTTTCCTTTCCTaGATTGATGAGATCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNNCFLS*IDEIRI Trigger: GATGCGGATCTCATCAATGCAGGAAAGGAAACAGTT...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATCAAGTTGAAATCTGCTaGATTGGCATGAGGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNQVEIC*IGMRFG Trigger: ACCAAACCTCATGCCAATGCAGCAGATTTCAACTTG...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGTGGATTCCTATAAGATTCTCTaGAATACCACACAGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILCVENAILAAWDKCSVDSYKIL*NTTQPK Trigger: TTTGGGCTGTGTGGTATTCCAGAGAATCTTATAGGA...ATCCACTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGGAAGAAAGAGGCTCCTaGGAGAACAGTAACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQEERGS*ENSNCF Trigger: GAAACAGTTACTGTTCTCCCAGGAGCCTCTTTCTTC...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CCA 90 bp | TATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGACTCATGATCAATTGCCGAATGACTCATCGCTaGAGAAGAAAGAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHLFKYCCHYDSGLMINCRMTHR*RRKRLL Trigger: CAGGAGCCTCTTTCTTCTCCAGCGATGAGTCATTCG...GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | GATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTTGCACATTGGCAGATTaGAGTTTCTTGCACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DISRWREQCLWLHKSRNTCTLAD*SFLHFS Trigger: GGAAAAGTGCAAGAAACTTCAATCTGCCAATGTGCA...AGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGATTTCTCTCCCTTTATaGGGCGGTGCACATAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQISLPL*GGAHKS Trigger: AGATTTATGTGCACCGCCTCATAAAGGGAGAGAAAT...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTGTCTATTCAGGCTTTGAAGTTTAAGACATTCTTAGAAGCCCCTTGCGTTCATCTTTGTTATATTTaGTGGGTGATCCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSIQALKFKTFLEAPCVHLCYI*WVILLP Trigger: AGGAAGGAGGATCACCCATCAAATATAACAAAGATG...AACGCAAGGGGCTTCTAAGAATGTCTTAAACTTCAAAGCCTGAATAGACAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | TCGAGGTTTAATACATATAGCATAAAAGATGAGCATATATCCACTGTGAGCAACTTCTTGCACTTTTCCTaGAAATCACATTGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRFNTYSIKDEHISTVSNFLHFS*KSHCLP Trigger: GGGCAGGCAATGTGATTTTCAGGAAAAGTGCAAGAA...GTTGCTCACAGTGGATATATGCTCATCTTTTATGCTATATGTATTAAACCTCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CCA 90 bp | CTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTTGCGTGCACATAAATCTTTaGAATGTGGATATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLHKSRNTRRKLAETSCVHINL*NVDIFW Trigger: CCAGAAGATATCCACATTCCAAAGATTTATGTGCAC...GCAAGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| 3UTR CAA 72 bp | TATCATGGCACTCTTAGAAAGTTGTCTATTCAGGCTTaGAAGTTTAAGACATTCTTAGAAGCCCCTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YHGTLRKLSIQA*KFKTFLEAPCV Trigger: AACGCAAGGGGCTTCTAAGAATGTCTTAAACTTCAAAGCCTGAATAGACAACTTTCTAAGAGTGCCATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | TCGAGGTTTAATACATATAGCATAAAAGATGAGCATATATCCACTGTGAGCAACATTTCTCTCCCTTTATaGGGCGGTGCACATAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRFNTYSIKDEHISTVSNISLPL*GGAHKS Trigger: AGATTTATGTGCACCGCCTCATAAAGGGAGAGAAAT...GTTGCTCACAGTGGATATATGCTCATCTTTTATGCTATATGTATTAAACCTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTATGGCTGCACAAATCCAGAAATACTAGAAGAAAACTAGCCGAAACTTCTGTGTACATTTCTCCATaGTTTTATGAGCATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLWLHKSRNTRRKLAETSVYISP*FYEHFP Trigger: AGGGAAATGCTCATAAAATCATGGAGAAATGTACAC...AGAAGTTTCGGCTAGTTTTCTTCTAGTATTTCTGGATTTGTGCAGCCATAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR TCA 90 bp | GATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTGTGTACATTTCTCCATaGTTTTATGAGCATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DISRWREQCLWLHKSRNTVYISP*FYEHFP Trigger: AGGGAAATGCTCATAAAATCATGGAGAAATGTACAC...AGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR GCA 90 bp | TCGAGGTTTAATACATATAGCATAAAAGATGAGCATATATCCACTGTGAGCAACAACTGTTTCCTTTCCTaGATTGATGAGATCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRFNTYSIKDEHISTVSNNCFLS*IDEIRI Trigger: GATGCGGATCTCATCAATGCAGGAAAGGAAACAGTT...GTTGCTCACAGTGGATATATGCTCATCTTTTATGCTATATGTATTAAACCTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CCA 90 bp | TCGAGGTTTAATACATATAGCATAAAAGATGAGCATATATCCACTGTGAGCAACTCCTATAAGATTCTCTaGAATACCACACAGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRFNTYSIKDEHISTVSNSYKIL*NTTQPK Trigger: TTTGGGCTGTGTGGTATTCCAGAGAATCTTATAGGA...GTTGCTCACAGTGGATATATGCTCATCTTTTATGCTATATGTATTAAACCTCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS TCA 90 bp | GTAGCAGACACACCCCTTATGCAGGGCGCCCCGCGAGCTGCGGGCTaGGGCGCCGAGCCGAAGCCCAGAGGACAGGAGTTTGAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VADTPLMQGAPRAAG*GAEPKPRGQEFESR Trigger: GCGGCTCTCAAACTCCTGTCCTCTGGGCTTCGGCTCGGCGCCTCAGCCCGCAGCTCGCGGGGCGCCCTGCATAAGGGGTGTGTCTGCTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CAA 90 bp | AGTGATGCCCCCTGGCAACTGTCTGTATTGTGGCTACTTCTGAGGAAGCATCCCCCAGGTATCATCCAGTaGGCCAGGTCACCATACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SDAPWQLSVLWLLLRKHPPGIIQ*ARSPYL Trigger: TAAGTATGGTGACCTGGCCAACTGGATGATACCTGG...GGGATGCTTCCTCAGAAGTAGCCACAATACAGACAGTTGCCAGGGGGCATCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGCACCAGCAGAGCATATGCCTTGTCCTTTCTTCTACTTACTTTTCACACTCACCTCTCGTGGCTaGCTGGCAATGGCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: MSAPAEHMPCPFFYLLFTLTSRG*LAMATL Trigger: CAGTGTTGCCATTGCCAGCAAGCCACGAGAGGTGAG...TGTGAAAAGTAAGTAGAAGAAAGGACAAGGCATATGCTCTGCTGGTGCTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATCTCACCTCTCGTGGCTaGCTGGCAATGGCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNLTSRG*LAMATL Trigger: CAGTGTTGCCATTGCCAGCAAGCCACGAGAGGTGAG...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CAA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTTCCTGAAAATCACATaGCCTGCCCGGTCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DILPFKSYVLKMQSWQPGFLKIT*PARSAF Trigger: GAAAGCAGACCGGGCAGGCAATGTGATTTTCAGGAA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CAA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGCAGCCTGTGCTCTTCTaGATGTCATCAACAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DILPFKSYVLKMQSWQPGQPVLF*MSSTVR Trigger: CCTGACTGTTGATGACATCAAGAAGAGCACAGGCTG...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
||
| CDS-3UTR CAA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGTCAACCCCTGCATTGTaGCTGACTGCAGTTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: DILPFKSYVLKMQSWQPGSTPAL*LTAVRS Trigger: AGATCTAACTGCAGTCAGCAACAATGCAGGGGTTGA...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAACCAGGCTTACCGGATTaGCCTTTTCCATCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELIYHDGENNVYGCTNPEPGLPD*PFPSPS Trigger: GGAAGGAGATGGAAAAGGCAAATCCGGTAAGCCTGG...TTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATCCAGGCTTACCGGATTaGCCTTTTCCATCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNPGLPD*PFPSPS Trigger: GGAAGGAGATGGAAAAGGCAAATCCGGTAAGCCTGG...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | ATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACATCAACCCCTGCATTGTaGCTGACTGCAGTTAGATCT | + |
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Preference number: 5 (lower is better) Translates to: ILPFKSYVLKMQSWQPGTSTPAL*LTAVRS Trigger: AGATCTAACTGCAGTCAGCAACAATGCAGGGGTTGA...TGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | TCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAATACTAGAAGATTGTCAACCCCTGCATaGTTGCTGACTGCAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SRWREQCLWLHKSRNTRRLSTPA*LLTAVR Trigger: TCTAACTGCAGTCAGCAACAATGCAGGGGTTGACAA...TCTTCTAGTATTTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | GACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGCCATCTTTGTTATATTaGATGGGTGATCCTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: DILPFKSYVLKMQSWQPGPSLLY*MGDPPS Trigger: GGAAGGAGGATCACCCATCAAATATAACAAAGATGG...CCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCACCAGCAGAGCATATGCCTTGTCCTTTCTTCTACTTACTTTTCACAGGGCAACACTGCCATCTTaGTTATATTTGATGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VSTSRAYALSFLLLTFHRATLPS*LYLMGD Trigger: ATCACCCATCAAATATAACAAAGATGGCAGTGTTGC...CCTGTGAAAAGTAAGTAGAAGAAAGGACAAGGCATATGCTCTGCTGGTGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR CAA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGCCAGGTATCATCCAGTaGGCCAGGTCACCATACTTA | + |
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Preference number: 5 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQPGIIQ*ARSPYL Trigger: TAAGTATGGTGACCTGGCCAACTGGATGATACCTGG...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | TTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGTTCAGTTGTCAACCCCTGCATaGTTGCTGACTGCAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FKSYVLKMQSWQPGTNVQLSTPA*LLTAVR Trigger: TCTAACTGCAGTCAGCAACAATGCAGGGGTTGACAA...CTGAACATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | TATCATCTCTTTAAATACTGCTGTCACTATGATTCAGGACTCATGATCAATTGCTTCCTGAAAATCACATaGCCTGCCCGGTCTGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: YHLFKYCCHYDSGLMINCFLKIT*PARSAF Trigger: GAAAGCAGACCGGGCAGGCAATGTGATTTTCAGGAA...GCAATTGATCATGAGTCCTGAATCATAGTGACAGCAGTATTTAAAGAGATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110690.9 |
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| CDS-3UTR CAA 90 bp | ACTGACATCCTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGCAACACTGCCATCTTaGTTATATTTGATGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: TDILPFKSYVLKMQSWQPATLPS*LYLMGD Trigger: ATCACCCATCAAATATAACAAAGATGGCAGTGTTGC...AGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAGGATGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | CTTCCGTTTAAATCCTATGTGTTGAAAATGCAATCTTGGCAGCCTGGGACAAATGACTCCATTTTCACTTaGAAGATGAACAGTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: LPFKSYVLKMQSWQPGTNDSIFT*KMNSHV Trigger: AACATGACTGTTCATCTTCAAAGTGAAAATGGAGTC...ATTTGTCCCAGGCTGCCAAGATTGCATTTTCAACACATAGGATTTAAACGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS-3UTR CAA 90 bp | GAACTGATATATCACGATGGAGAGAACAATGTCTATGGCTGCACAAATCCAGAAGACTCCATTTTCACTTaGAAGATGAACAGTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: ELIYHDGENNVYGCTNPEDSIFT*KMNSHV Trigger: AACATGACTGTTCATCTTCAAAGTGAAAATGGAGTC...TTCTGGATTTGTGCAGCCATAGACATTGTTCTCTCCATCGTGATATATCAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 90 bp | TCCCTCACCTCTCGTGGCTTGCTGGCAATGGCAACACTGCCATCTTaGTTATATTTGATGGGTGATCCTCCTTCCTGTACCAGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLTSRGLLAMATLPS*LYLMGDPPSCTRVP Trigger: TGGGACTCTGGTACAGGAAGGAGGATCACCCATCAAATATAACAAAGATGGCAGTGTTGCCATTGCCAGCAAGCCACGAGAGGTGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 90 bp | CGCTTGATGATCCGTTCCCTCACATCGCCTCCAGGCTTACCGGATTaGCCTTTTCCATCTCCTTCCTTTCGGAGTGATAAACGCTCAATT | + |
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Preference number: 6 (lower is better) Translates to: RLMIRSLTSPPGLPD*PFPSPSFRSDKRSI Trigger: AATTGAGCGTTTATCACTCCGAAAGGAAGGAGATGGAAAAGGCAAATCCGGTAAGCCTGGAGGCGATGTGAGGGAACGGATCATCAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS TCA 72 bp | GGCCCAGGCCGAAGTTGTCAACCCCTGCATTGTTGCTaGCTGCAGTTAGATCTTTTACTCCAGTCTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: GPGRSCQPLHCC*LQLDLLLQSSV Trigger: TACTGAAGACTGGAGTAAAAGATCTAACTGCAGTCAGCAACAATGCAGGGGTTGACAACTTCGGCCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 72 bp | TCTCGTGGCTTGCTGGCAATGGCAACACTGCCATCTTaGTTATATTTGATGGGTGATCCTCCTTCCTGTACC | + |
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Preference number: 6 (lower is better) Translates to: SRGLLAMATLPS*LYLMGDPPSCT Trigger: GGTACAGGAAGGAGGATCACCCATCAAATATAACAAAGATGGCAGTGTTGCCATTGCCAGCAAGCCACGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS GCA 72 bp | AATACCACACAGCCCAAAACCACCAACCAGCAAGGTTaGACCATTAGGAATATCTTTTACAGCTTCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: NTTQPKTTNQQG*TIRNIFYSFHG Trigger: CCCGTGGAAGCTGTAAAAGATATTCCTAATGGTGCAACCTTGCTGGTTGGTGGTTTTGGGCTGTGTGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS TCA 72 bp | AATGGCAACACTGCCATCTTTGTTATATTTGATGGGTaGTCCTCCTTCCTGTACCAGAGTCCCATACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: NGNTAIFVIFDG*SSFLYQSPIPC Trigger: ACAGGGTATGGGACTCTGGTACAGGAAGGAGGATCACCCATCAAATATAACAAAGATGGCAGTGTTGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS TCA 72 bp | ACTGTTTGCCCGTCAGTGGTAGTGTACATTTCTCCATaGTTTTATGAGCATTTCCCTTCGCAGAGTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TVCPSVVVYISP*FYEHFPSQSAP Trigger: TGGAGCACTCTGCGAAGGGAAATGCTCATAAAATCATGGAGAAATGTACACTACCACTGACGGGCAAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CCA 72 bp | CTCCCACATATGAGGAGATCATTCGTTTTATCTGCTTaGATCGAAGTAAAAGGCCCAGGCCGAAGTTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPHMRRSFVLSA*IEVKGPGRSCQ Trigger: TTGACAACTTCGGCCTGGGCCTTTTACTTCGATCCAAGCAGATAAAACGAATGATCTCCTCATATGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 72 bp | TCTCCCACATATGAGGAGATCATTCGTTTTATCTGCTaGGATCGAAGTAAAAGGCCCAGGCCGAAGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPTYEEIIRFIC*DRSKRPRPKLS Trigger: TGACAACTTCGGCCTGGGCCTTTTACTTCGATCCAAGCAGATAAAACGAATGATCTCCTCATATGTGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 72 bp | ATTTCTTCAACCTCCACCACGGTAGTTCCTGCAGCTTaGCACATTGGCAGATTGAAGTTTCTTGCACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISSTSTTVVPAA*HIGRLKFLALF Trigger: GAAAAGTGCAAGAAACTTCAATCTGCCAATGTGCAAAGCTGCAGGAACTACCGTGGTGGAGGTTGAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS CAA 90 bp | ATGTCTACAATTTCTTCAACCTCCACCACGGTAGTTCCTGCAGCTTaGCACATTGGCAGATTGAAGTTTCTTGCACTTTTCCTGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: MSTISSTSTTVVPAA*HIGRLKFLALFLKI Trigger: GATTTTCAGGAAAAGTGCAAGAAACTTCAATCTGCCAATGTGCAAAGCTGCAGGAACTACCGTGGTGGAGGTTGAAGAAATTGTAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS TCA 72 bp | GAACTGTCGCTCAAATTCTGCATTTTCTCCCACATATaGGGAGATCATTCGTTTTATCTGCTTGGATCGAAG | + |
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Preference number: 6 (lower is better) Translates to: ELSLKFCIFSHI*GDHSFYLLGSK Trigger: CTTCGATCCAAGCAGATAAAACGAATGATCTCCTCATATGTGGGAGAAAATGCAGAATTTGAGCGACAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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| CDS TCA 72 bp | ATAAATCTTTGGAATGTGGATATCTTCTGGGGCAAATaGGCCAATGTCTACAATTTCTTCAACCTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: INLWNVDIFWGK*ANVYNFFNLHH Trigger: GTGGTGGAGGTTGAAGAAATTGTAGACATTGGCTCATTTGCCCCAGAAGATATCCACATTCCAAAGATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110690.9 ENSMUST00000138927.2 |
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