Pregenerated sensors for OXA1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000959Ensembl transcript IDs: ENSMUST00000000985.7, ENSMUST00000228719.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGCTGGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGCGTCGTaGTCTGTCACGTCCACCTTTATACCCAGAGACCGGATCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: MAGACAEARGGCQAS*SVTSTFIPRDRISH Trigger: GTGTGAGATCCGGTCTCTGGGTATAAAGGTGGACGTGACAGAGCACGACGCCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 90 bp | ACTGTGGCAGGAAGTAGGCCATTTTGGGGCAGTCCTGGCAGCACCTaGGTGTGGCCACCCACTCCTCTTTCCTTTACAAGGGCCAACAAT | + |
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Preference number: 1 (lower is better) Translates to: TVAGSRPFWGSPGST*VWPPTPLSFTRANN Trigger: ATTGTTGGCCCTTGTAAAGGAAAGAGGAGTGGGTGGCCACACCCAGGTGCTGCCAGGACTGCCCCAAAATGGCCTACTTCCTGCCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR TCA 90 bp | GGATGCAAACTCAGATGGAGGTGCACAGTGTGTGAGGTAGAGGTCTaGGCTGTGAAGACCAGGAGAAAACATGAAGCTCCTTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GCKLRWRCTVCEVEV*AVKTRRKHEAPSQE Trigger: CTCCTGGGAAGGAGCTTCATGTTTTCTCCTGGTCTTCACAGCTCAGACCTCTACCTCACACACTGTGCACCTCCATCTGAGTTTGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 90 bp | AAGCTAGTGCATAAACACTTCAGCTTCTTCTTAAAGTATGGCTGGTaGATGCGCAGAGGCCAGAGGAGGGTGTCAGGCGTCGTGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: KLVHKHFSFFLKYGW*MRRGQRRVSGVVLC Trigger: ACAGAGCACGACGCCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAGCTGAAGTGTTTATGCACTAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 90 bp | GAAAAGCTAGTGCATAAACACTTCAGCTTCTTCTTAAAGTATGGCTaGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGCGTCGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: EKLVHKHFSFFLKYG*CMRRGQRRVSGVVL Trigger: GAGCACGACGCCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAGCTGAAGTGTTTATGCACTAGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 90 bp | GGGTCTTGTCAGAGTGAGCACAGAACACGTCAACCGAGTGTGTCTTaGCAAGGCTTCTTTGCGTTTGCTTTGATGCTGCTGTTGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSCQSEHRTRQPSVS*QGFFAFALMLLLLL Trigger: CAGCAACAACAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAAGACACACTCGGTTGACGTGTTCTGTGCTCACTCTGACAAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| 3UTR GCA 90 bp | CTGGGTGTGGCCACCCACTCCTCTTTCCTTTACAAGGGCCAACAATaGTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: LGVATHSSFLYKGQQ*SKLVSFRGTQNCHR Trigger: TCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTTGGCCCTTGTAAAGGAAAGAGGAGTGGGTGGCCACACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 90 bp | TTATTCTACTTAGTGACTGGGGTATTTATGCAGTTCAAACAGACATaGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCAGCTGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: LFYLVTGVFMQFKQT*KLKDSVLPLKPAAN Trigger: GTTGGCAGCTGGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCATGTCTGTTTGAACTGCATAAATACCCCAGTCACTAAGTAGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGAAGCCCAGACAAGACAGGGGTTTACTAGTTCTGTGGATGGAAGGCTGCTGGGGCAAGTCTGTGTaGAGGAGTCTGCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IKKPRQDRGLLVLWMEGCWGKSV*RSLQRQ Trigger: CTGCCTCTGCAGACTCCTCCACACAGACTTGCCCCA...GCAGCCTTCCATCCACAGAACTAGTAAACCCCTGTCTTGTCTGGGCTTCTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR CCA 90 bp | GTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTGGTTTACTAGTTCTGTaGATGGAAGGCTGCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRAGPCSAFCLSAGDLNSGLLVL*MEGCLA Trigger: AGCCAAGCAGCCTTCCATCCACAGAACTAGTAAACC...AGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCAGACTTCATAAATGGATGATGCAGACTGTGGCAGGAAGTAGGCCATTTGTAAGAGCAGGGCCATaGTCAGCTTTCTGCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: CFRLHKWMMQTVAGSRPFVRAGP*SAFCLS Trigger: ACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTAC...AAATGGCCTACTTCCTGCCACAGTCTGCATCATCCATTTATGAAGTCTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR CCA 90 bp | AACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCAGGATGGAAGGCTGCTTaGCTCTCCAGGGCTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: NNAPNLSPSEEHKTVTDAGWKAA*LSRALL Trigger: TAAAAGAGCCCTGGAGAGCCAAGCAGCCTTCCATCC...TGCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR CCA 90 bp | TACAAATACAGCACAACTGTTGTACTAAAATGTCATGAATGGGAAAAGCTAGTGTGTAGTCCCCAGGGCTaGGGCAAGTCTGTGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YKYSTTVVLKCHEWEKLVCSPQG*GKSVWR Trigger: CCTCCACACAGACTTGCCCCAGCCCTGGGGACTACA...CACTAGCTTTTCCCATTCATGACATTTTAGTACAACAGTTGTGCTGTATTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR TCA 90 bp | TGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCAGCTGCCAACGGCAATAGATGTACTAAAATGTCATaGATGGGAAAAGCTAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: WKLKDSVLPLKPAANGNRCTKMS*MGKASA Trigger: TGCACTAGCTTTTCCCATTCATGACATTTTAGTACA...TCTATTGCCGTTGGCAGCTGGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR-3UTR TCA 90 bp | AACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCATATGTTCCTAAGGTCTaGGTGGCTTTATTCTACTTA | + |
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Preference number: 2 (lower is better) Translates to: NNAPNLSPSEEHKTVTDAYVPKV*VALFYL Trigger: TAAGTAGAATAAAGCCACTCAGACCTTAGGAACATA...TGCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | GCATGCGCAGAGGCCAGAGGAGGGTGTCAGGCGTCGTaGTCTGTCACGTCCACCTTTATACCCAGAGACCGG | + |
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Preference number: 3 (lower is better) Translates to: ACAEARGGCQAS*SVTSTFIPRDR Trigger: CCGGTCTCTGGGTATAAAGGTGGACGTGACAGAGCACGACGCCTGACACCCTCCTCTGGCCTCTGCGCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 72 bp | TGGATGATGCAGACTGTGGCAGGAAGTAGGCCATTTTaGGGCAGTCCTGGCAGCACCTGGGTGTGGCCACCC | + |
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Preference number: 3 (lower is better) Translates to: WMMQTVAGSRPF*GSPGSTWVWPP Trigger: GGGTGGCCACACCCAGGTGCTGCCAGGACTGCCCCAAAATGGCCTACTTCCTGCCACAGTCTGCATCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | CACAGCACTGGGGTCACAGGCGTAAGAGCAGGGCCATaGTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: HSTGVTGVRAGP*SAFCLSAGDLN Trigger: GTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTACGCCTGTGACCCCAGTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR TCA 72 bp | GTGGAGGAGTCTGCAGAGGCAGGGGTCTTGTCAGAGTaGGCACAGAACACGTCAACCGAGTGTGTCTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: VEESAEAGVLSE*AQNTSTECVLP Trigger: TGGCAAGACACACTCGGTTGACGTGTTCTGTGCTCACTCTGACAAGACCCCTGCCTCTGCAGACTCCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| 3UTR TCA 72 bp | GGTAGAGGTCTGAGCTGTGAAGACCAGGAGAAAACATaGAGCTCCTTCCCAGGAGCTAGGGCTGGCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GRGLSCEDQEKT*SSFPGARAGKG Trigger: TCCCTTGCCAGCCCTAGCTCCTGGGAAGGAGCTTCATGTTTTCTCCTGGTCTTCACAGCTCAGACCTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | GTCACAGGCGTAAGAGCAGGGCCATGCTCAGCTTTCTaGCTGAGTGCCGGGGATTTGAACTCTTATCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VTGVRAGPCSAF*LSAGDLNSYLL Trigger: CAGCAGATAAGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTACGCCTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | CATAAACACTTCAGCTTCTTCTTAAAGTATGGCTGGTaGATGCGCAGAGGCCAGAGGAGGGTGTCAGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: HKHFSFFLKYGW*MRRGQRRVSGV Trigger: GACGCCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAGCTGAAGTGTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 72 bp | GTGCATAAACACTTCAGCTTCTTCTTAAAGTATGGCTaGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: VHKHFSFFLKYG*CMRRGQRRVSG Trigger: GCCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAGCTGAAGTGTTTATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | CGTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTaGCGGGGATTTGAACTCTTATCTGCTGATCCATTT | + |
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Preference number: 3 (lower is better) Translates to: RKSRAMLSFLPE*RGFELLSADPF Trigger: AAATGGATCAGCAGATAAGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | CAGAGTGAGCACAGAACACGTCAACCGAGTGTGTCTTaGCAAGGCTTCTTTGCGTTTGCTTTGATGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QSEHRTRQPSVS*QGFFAFALMLL Trigger: CAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAAGACACACTCGGTTGACGTGTTCTGTGCTCACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| 3UTR TCA 72 bp | TCTAGGATGCAAACTCAGATGGAGGTGCACAGTGTGTaGGGTAGAGGTCTGAGCTGTGAAGACCAGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRMQTQMEVHSV*GRGLSCEDQEK Trigger: TTTCTCCTGGTCTTCACAGCTCAGACCTCTACCTCACACACTGTGCACCTCCATCTGAGTTTGCATCCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR GCA 72 bp | TCAACCGAGTGTGTCTTGCCAAGGCTTCTTTGCGTTTaGTTTGATGCTGCTGTTGTTGCTGTTGGGAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: STECVLPRLLCV*FDAAVVAVGSF Trigger: AAAGCTCCCAACAGCAACAACAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAAGACACACTCGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| 3UTR GCA 72 bp | CAAGACAGGGGTTTACTAGTTCTGTGGATGGAAGGCTaGTTGGCTCTCCAGGGCTCTTTTAATACACACAAA | + |
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Preference number: 3 (lower is better) Translates to: QDRGLLVLWMEG*LALQGSFNTHK Trigger: TTTGTGTGTATTAAAAGAGCCCTGGAGAGCCAAGCAGCCTTCCATCCACAGAACTAGTAAACCCCTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR TCA 72 bp | TTTGTTTTGCTACATGTTTCAGACTTCATAAATGGATaGTGCAGACTGTGGCAGGAAGTAGGCCATTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: FVLLHVSDFING*CRLWQEVGHFG Trigger: CCCAAAATGGCCTACTTCCTGCCACAGTCTGCATCATCCATTTATGAAGTCTGAAACATGTAGCAAAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 72 bp | TTAGTGACTGGGGTATTTATGCAGTTCAAACAGACATaGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LVTGVFMQFKQT*KLKDSVLPLKP Trigger: TGGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCATGTCTGTTTGAACTGCATAAATACCCCAGTCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 72 bp | TTTATTTGTTTTGCTACATGTTTCAGACTTCATAAATaGATGATGCAGACTGTGGCAGGAAGTAGGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: FICFATCFRLHK*MMQTVAGSRPF Trigger: AAATGGCCTACTTCCTGCCACAGTCTGCATCATCCATTTATGAAGTCTGAAACATGTAGCAAAACAAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| 3UTR CCA 72 bp | AAATACAGCACAACTGTTGTACTAAAATGTCATGAATaGGAAAAGCTAGTGCATAAACACTTCAGCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KYSTTVVLKCHE*EKLVHKHFSFF Trigger: GAAGAAGCTGAAGTGTTTATGCACTAGCTTTTCCCATTCATGACATTTTAGTACAACAGTTGTGCTGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTTAAAGTATGGCTGGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGGTTACCCCGGCGGGCTaGGAGGAGCTCGGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLKVWLVHAQRPEEGVRVTPAG*EELGGQ Trigger: CTGGCCGCCGAGCTCCTCGCAGCCCGCCGGGGTAAC...CCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR TCA 90 bp | CTTCTTCTTAAAGTATGGCTGGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGAGGACAGCCAGTACATaGACACTGCCGAGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LLLKVWLVHAQRPEEGVRRTAST*TLPRGS Trigger: ACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCT...CCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | GTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTCTGGACCTGGGCTTCTaGAAAGAGGGTGGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: VRAGPCSAFCLSAGDLNSLDLGF*KEGGRC Trigger: ACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAG...AGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | CGTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTATTCCAAGAGGTTCTaGATGAGACCCACCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RKSRAMLSFLPECRGFELYSKRF*MRPTGV Trigger: CACCCCGGTGGGTCTCATCCAGAACCTCTTGGAATA...GAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | GTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTGACACGGTGAGATCTTaGAACCACCAGAGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VRAGPCSAFCLSAGDLNSDTVRS*NHQSPP Trigger: AGGTGGGCTCTGGTGGTTCCAAGATCTCACCGTGTC...AGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | ACCCACTCCTCTTTCCTTTACAAGGGCCAACAATGCTCCAAACTTGTCTCCTTCCAGTACACGTGGCAATaGCTCCCCACCACGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: THSSFLYKGQQCSKLVSFQYTWQ*LPTTAG Trigger: GCCTGCCGTGGTGGGGAGCCATTGCCACGTGTACTG...GAAGGAGACAAGTTTGGAGCATTGTTGGCCCTTGTAAAGGAAAGAGGAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | AAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTTACCAGTACATGAACACTaGCGAGGGGAAGTGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: KSRAMLSFLPECRGFELLPVHEH*RGEVDG Trigger: ACCATCCACTTCCCCTCGGCAGTGTTCATGTACTGG...TAAGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | GTAAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTCTCTCGGAGCTGCTGTaGAATTTCAGCGTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VRAGPCSAFCLSAGDLNSLSELL*NFSVLP Trigger: TGGAAGAACGCTGAAATTGCACAGCAGCTCCGAGAG...AGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | TTGCCCATGACACCTCTAGGATGCAAACTCAGATGGAGGTGCACAGTGTGTGAGTGTGGTTGTGGATCTTaGCTGCTTCTCGCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPMTPLGCKLRWRCTVCECGCGS*LLLAGP Trigger: AGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACA...CTCACACACTGTGCACCTCCATCTGAGTTTGCATCCTAGAGGTGTCATGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | AGCAGAGGGTTGTGCGTAAAAGTCTGTCGTAAGGGACCTGGGAGAAGACAGAAACCGAGGGGAAGTGGATaGTCACAGGCAAGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: SRGLCVKVCRKGPGRRQKPRGSG*SQARPP Trigger: TGGTGGTCTTGCCTGTGACCATCCACTTCCCCTCGG...TTTCTGTCTTCTCCCAGGTCCCTTACGACAGACTTTTACGCACAACCCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| CDS-3UTR CCA 90 bp | ATGACACCTCTAGGATGCAAACTCAGATGGAGGTGCACAGTGTGTGAGGTAGAGGTCGTAAGGGACCCCTaGCAGCCAGGTCCAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: MTPLGCKLRWRCTVCEVEVVRDP*QPGPSV Trigger: AACACTTGGACCTGGCTGCCAGGGGTCCCTTACGAC...CTCTACCTCACACACTGTGCACCTCCATCTGAGTTTGCATCCTAGAGGTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | GCACAACCCCCTTCCATACTTAACAAACATCAAGAAGCCCAGACAAGACAGGGGGTTGTGGATCTTGGCTaGTTCTCGCTGGCCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: AQPPSILNKHQEAQTRQGVVDLG*FSLALH Trigger: GTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAAC...CCCCTGTCTTGTCTGGGCTTCTTGATGTTTGTTAAGTATGGAAGGGGGTTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | AGCAGAGGGTTGTGCGTAAAAGTCTGTCGTAAGGGACCTGGGAGAAGACAGAAAGGATCTTCAGCACTGTaGGCACAGCTGGAATCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SRGLCVKVCRKGPGRRQKGSSAL*AQLESG Trigger: TCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATCC...TTTCTGTCTTCTCCCAGGTCCCTTACGACAGACTTTTACGCACAACCCTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| CDS-3UTR CCA 90 bp | CAACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCGGGGGTGCCTGGACCTaGGCTTCTGCAAAGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QQCSKLVSFRGTQNCHRCGGAWT*ASAKRV Trigger: CACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCC...GCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | ATGACACCTCTAGGATGCAAACTCAGATGGAGGTGCACAGTGTGTGAGGTAGAGTGGGCACAGGCAGGTTaGCCATCTCTCTCAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: MTPLGCKLRWRCTVCEVEWAQAG*PSLSRQ Trigger: TTGCCTTGAGAGAGATGGCCAACCTGCCTGTGCCCA...CTCTACCTCACACACTGTGCACCTCCATCTGAGTTTGCATCCTAGAGGTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR CCA 90 bp | GCACAACCCCCTTCCATACTTAACAAACATCAAGAAGCCCAGACAAGACAGGGGGGCAGTGACTACCAGTaGCAAGACGTAGATGGGATC | + |
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Preference number: 4 (lower is better) Translates to: AQPPSILNKHQEAQTRQGGSDYQ*QDVDGI Trigger: GATCCCATCTACGTCTTGCCACTGGTAGTCACTGCC...CCCCTGTCTTGTCTGGGCTTCTTGATGTTTGTTAAGTATGGAAGGGGGTTGTGC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS-3UTR GCA 90 bp | ACCGAGTGTGTCTTGCCAAGGCTTCTTTGCGTTTGCTTTGATGCTGCTGTTGTTAGGTCCAAGTGTTTCTaGATTCGCTGCTCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TECVLPRLLCVCFDAAVVRSKCF*IRCSRS Trigger: AGAGCGGGAGCAGCGAATGCAGAAACACTTGGACCT...AACAACAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAAGACACACTCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTTCAAACAGACATGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCCACCTGTCTGGAGGCTaGGCACAGGCAGGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQTDMETKRFSSPSEAHLSGG*AQAGWP Trigger: TGGCCAACCTGCCTGTGCCCAGCCTCCAGACAGGTG...GGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCATGTCTGTTTGAACTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR TCA 90 bp | TTACTAGTTCTGTGGATGGAAGGCTGCTTGGCTCTCCAGGGCTCTTTTAATACATGGGATCAGACACGGTaGGATCTTGGAACCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLVLWMEGCLALQGSFNTWDQTR*DLGTTR Trigger: TCTGGTGGTTCCAAGATCTCACCGTGTCTGATCCCA...TGTATTAAAAGAGCCCTGGAGAGCCAAGCAGCCTTCCATCCACAGAACTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR TCA 90 bp | TTACTAGTTCTGTGGATGGAAGGCTGCTTGGCTCTCCAGGGCTCTTTTAATACAACCACATTGTGGCAGTaGCTACCAGTGGCAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLWMEGCLALQGSFNTTTLWQ*LPVARR Trigger: ACGTCTTGCCACTGGTAGTCACTGCCACAATGTGGT...TGTATTAAAAGAGCCCTGGAGAGCCAAGCAGCCTTCCATCCACAGAACTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | TGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCAGCTGCCAACGGCAATAGAAGCTACCTCTGGTACTaGAGCAGGGATAGAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKLKDSVLPLKPAANGNRSYLWY*SRDRGS Trigger: GCTACCTCTATCCCTGCTGCAGTACCAGAGGTAGCT...TCTATTGCCGTTGGCAGCTGGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | TCAACCGAGTGTGTCTTGCCAAGGCTTCTTTGCGTTTGCTTTGATGCTGCTGTTCTCTCGGAGCTGCTGTaGAATTTCAGCGTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STECVLPRLLCVCFDAAVLSELL*NFSVLP Trigger: TGGAAGAACGCTGAAATTGCACAGCAGCTCCGAGAG...AACAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAAGACACACTCGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCACGTCCACCTTTATACCCAGAGACCGGATCTCACACTGAACCTGGAGAGGCTTCTTTGCGTTTaGTTTGATGCTGCTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCHVHLYTQRPDLTLNLERLLCV*FDAAVV Trigger: AACAACAGCAGCATCAAAGCAAACGCAAAGAAGCCT...CTCCAGGTTCAGTGTGAGATCCGGTCTCTGGGTATAAAGGTGGACGTGACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGACTTCATAAATGGATGATGCAGACTGTGGCAGGAAGTAGGCCATTTCCGAGGGGAAGTGGATaGTCACAGGCAAGACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CFRLHKWMMQTVAGSRPFPRGSG*SQARPP Trigger: TGGTGGTCTTGCCTGTGACCATCCACTTCCCCTCGG...AAATGGCCTACTTCCTGCCACAGTCTGCATCATCCATTTATGAAGTCTGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR TCA 90 bp | CAACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCGCTGGCCCTTCACAATaGGAGGAAAAACGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QQCSKLVSFRGTQNCHRCAGPSQ*EEKRGI Trigger: GATGCCTCGTTTTTCCTCTCATTGTGAAGGGCCAGC...GCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR TCA 90 bp | TGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCAGCTGCCAACGGCAATAGACCAACTTGGCCTCTCTaGTTCGAGCGGAAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKLKDSVLPLKPAANGNRPTWPL*FERKTS Trigger: AGAAGTTTTCCGCTCGAATCAGAGAGGCCAAGTTGG...TCTATTGCCGTTGGCAGCTGGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | TTACTAGTTCTGTGGATGGAAGGCTGCTTGGCTCTCCAGGGCTCTTTTAATACATGCAGCAGAGGGTTGTaGGTAAAAGTCTGTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVLWMEGCLALQGSFNTCSRGL*VKVCRK Trigger: CTTACGACAGACTTTTACGCACAACCCTCTGCTGCA...TGTATTAAAAGAGCCCTGGAGAGCCAAGCAGCCTTCCATCCACAGAACTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | ACCCACTCCTCTTTCCTTTACAAGGGCCAACAATGCTCCAAACTTGTCTCCTTCTTGCCAAGGCTTCTTTaGGTTTGCTTTGATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THSSFLYKGQQCSKLVSFLPRLL*VCFDAA Trigger: AGCAGCATCAAAGCAAACGCAAAGAAGCCTTGGCAA...GAAGGAGACAAGTTTGGAGCATTGTTGGCCCTTGTAAAGGAAAGAGGAGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTTCAAACAGACATGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCATAACAGGGGGTGCCTaGACCTGGGCTTCTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YAVQTDMETKRFSSPSEAITGGA*TWASAK Trigger: CTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTAT...GGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCATGTCTGTTTGAACTGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CCA 90 bp | CAACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCTGCATCTCTGGCATGTaGTTGTGGATCTTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQCSKLVSFRGTQNCHRCCISGM*LWILAA Trigger: AGCAGCCAAGATCCACAACCACATGCCAGAGATGCA...GCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTTCAAACAGACATGGAAACTAAAAGATTCAGTTCTCCCTCTGAAGCCAGGTCCAAGTGTTTCTaGATTCGCTGCTCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YAVQTDMETKRFSSPSEARSKCF*IRCSRS Trigger: AGAGCGGGAGCAGCGAATGCAGAAACACTTGGACCT...GGCTTCAGAGGGAGAACTGAATCTTTTAGTTTCCATGTCTGTTTGAACTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | CAACAATGCTCCAAACTTGTCTCCTTCAGAGGAACACAAAACTGTCACAGATGCCAACCGAGTGTGTCTTaGCAAGGCTTCTTTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQCSKLVSFRGTQNCHRCQPSVS*QGFFAF Trigger: AAACGCAAAGAAGCCTTGGCAAGACACACTCGGTTG...GCATCTGTGACAGTTTTGTGTTCCTCTGAAGGAGACAAGTTTGGAGCATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR GCA 90 bp | TACAAATACAGCACAACTGTTGTACTAAAATGTCATGAATGGGAAAAGCTAGTGGGATCTTCAGCACTGTaGGCACAGCTGGAATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKYSTTVVLKCHEWEKLVGSSAL*AQLESG Trigger: TCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATCC...CACTAGCTTTTCCCATTCATGACATTTTAGTACAACAGTTGTGCTGTATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS GCA 90 bp | GACGGCGAGAAGAGCACAGGGTGGCCGCCCGTTACCCCGGCGGGCTaGGAGGAGCTCGGCGGCCAGCGGTCTCAGGGACACTGCGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGEKSTGWPPVTPAG*EELGGQRSQGHCDA Trigger: AGCGTCGCAGTGTCCCTGAGACCGCTGGCCGCCGAGCTCCTCGCAGCCCGCCGGGGTAACGGGCGGCCACCCTGTGCTCTTCTCGCCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS CCA 90 bp | TGTACTGATGCAGCGAGGAGTGAAGACGGCGAGAAGAGCACAGGGTaGCCGCCCGTTACCCCGGCGGGCTGCGAGGAGCTCGGCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTDAARSEDGEKSTG*PPVTPAGCEELGGQ Trigger: CTGGCCGCCGAGCTCCTCGCAGCCCGCCGGGGTAACGGGCGGCCACCCTGTGCTCTTCTCGCCGTCTTCACTCCTCGCTGCATCAGTACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | CGCAGAGGCCAGAGGAGGGTGTCAGGCGTCGTGCTCTGTCACGTCCACCTTTATTGGTCTCCGGCCAACTaGGCCTCTCTGATTCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRGQRRVSGVVLCHVHLYWSPAN*ASLIRA Trigger: CGCTCGAATCAGAGAGGCCAAGTTGGCCGGAGACCA...ATAAAGGTGGACGTGACAGAGCACGACGCCTGACACCCTCCTCTGGCCTCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS GCA 90 bp | GGCCTCTTACCCCTGGCAGCCAGGTCCAAGTGTTTCTGCATTCGCTaGTCCCGCTCTCGGAGCTGCTGTGCAATTTCAGCGTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLPLAARSKCFCIR*SRSRSCCAISAFFQ Trigger: CTGGAAGAACGCTGAAATTGCACAGCAGCTCCGAGAGCGGGAGCAGCGAATGCAGAAACACTTGGACCTGGCTGCCAGGGGTAAGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
||
| CDS GCA 90 bp | ATTTGTCAGGGTCATGTACGACTCGCTGGGGGATCTTCAGCACTGTaGGCACAGCTGGAATCCGGAGGCAGGCTACTTGGCACAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICQGHVRLAGGSSAL*AQLESGGRLLGTGR Trigger: TCTCCCTGTGCCAAGTAGCCTGCCTCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATCCCCCAGCGAGTCGTACATGACCCTGACAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
||
| CDS CCA 90 bp | GCAGCAGGGATAGAGGTAGCAGGAATAACAGGGGGTGCCTGGACCTaGGCTTCTGCAAAGAGGGTGGCAGATGTACTGATGCAGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAGIEVAGITGGAWT*ASAKRVADVLMQRG Trigger: TCCTCGCTGCATCAGTACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTATTCCTGCTACCTCTATCCCTGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS CCA 90 bp | AAGCCTTCCCTAGGAGGCAATTTGTCAGGGTCATGTACGACTCGCTaGGGGATCTTCAGCACTGTGCGCACAGCTGGAATCCGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPSLGGNLSGSCTTR*GIFSTVRTAGIRRQ Trigger: CTGCCTCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATCCCCCAGCGAGTCGTACATGACCCTGACAAATTGCCTCCTAGGGAAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
||
| CDS TCA 90 bp | AGGCTACTTGGCACAGGGAGAACACGTTGGAGGACAGCCAGTACATaGACACTGCCGAGGGGAAGTGGATGGTCACAGGCAAGACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLGTGRTRWRTAST*TLPRGSGWSQARPP Trigger: TGGTGGTCTTGCCTGTGACCATCCACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTGCCAAGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
||
| CDS GCA 90 bp | CTCTGGTACTGCAGCAGGGATAGAGGTAGCAGGAATAACAGGGGGTaGCTGGACCTGGGCTTCTGCAAAGAGGGTGGCAGATGTACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWYCSRDRGSRNNRG*LDLGFCKEGGRCTD Trigger: ATCAGTACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTATTCCTGCTACCTCTATCCCTGCTGCAGTACCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS GCA 90 bp | TGGTCTCCGGCCAACTTGGCCTCTCTGATTCGAGCGGAAAACTTCTaGATCTCTGGCATGTGGTTGTGGATCTTGGCTGCTTCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSPANLASLIRAENF*ISGMWLWILAASRW Trigger: CCAGCGAGAAGCAGCCAAGATCCACAACCACATGCCAGAGATGCAGAAGTTTTCCGCTCGAATCAGAGAGGCCAAGTTGGCCGGAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS CCA 90 bp | GGTAGCACACTGGACTACATCTGCAGCTCCTCCAGAAGCTACCTCTaGTACTGCAGCAGGGATAGAGGTAGCAGGAATAACAGGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSTLDYICSSSRSYL*YCSRDRGSRNNRGC Trigger: GCACCCCCTGTTATTCCTGCTACCTCTATCCCTGCTGCAGTACCAGAGGTAGCTTCTGGAGGAGCTGCAGATGTAGTCCAGTGTGCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS CCA 90 bp | GGCCAACTTGGCCTCTCTGATTCGAGCGGAAAACTTCTGCATCTCTaGCATGTGGTTGTGGATCTTGGCTGCTTCTCGCTGGCCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLGLSDSSGKLLHL*HVVVDLGCFSLALH Trigger: GTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGCCAGAGATGCAGAAGTTTTCCGCTCGAATCAGAGAGGCCAAGTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS CCA 90 bp | AACACGTTGGAGGACAGCCAGTACATGAACACTGCCGAGGGGAAGTaGATGGTCACAGGCAAGACCACCAGGGGCATCACCCTGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: NTLEDSQYMNTAEGK*MVTGKTTRGITLIM Trigger: CATTATCAGGGTGATGCCCCTGGTGGTCTTGCCTGTGACCATCCACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCTCCAACGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
||
| CDS CCA 90 bp | ATCTTCAGCACTGTGCGCACAGCTGGAATCCGGAGGCAGGCTACTTaGCACAGGGAGAACACGTTGGAGGACAGCCAGTACATGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: IFSTVRTAGIRRQAT*HRENTLEDSQYMNT Trigger: AGTGTTCATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTGCCAAGTAGCCTGCCTCCGGATTCCAGCTGTGCGCACAGTGCTGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCACGTCCACCTTTATACCCAGAGACCGGATCTCACACTGAACCTGGAGATGTGGTTGTGGATCTaGGCTGCTTCTCGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCHVHLYTQRPDLTLNLEMWLWI*AASRWP Trigger: GGGCCAGCGAGAAGCAGCCAAGATCCACAACCACAT...CTCCAGGTTCAGTGTGAGATCCGGTCTCTGGGTATAAAGGTGGACGTGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | TTGCCCATGACACCTCTAGGATGCAAACTCAGATGGAGGTGCACAGTGTGTGAGCTGGGCACAGGCAGGTaGGCCATCTCTCTCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPMTPLGCKLRWRCTVCELGTGR*AISLKA Trigger: TGCCTTGAGAGAGATGGCCAACCTGCCTGTGCCCAG...CTCACACACTGTGCACCTCCATCTGAGTTTGCATCCTAGAGGTGTCATGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCACGTCCACCTTTATACCCAGAGACCGGATCTCACACTGAACCTGGAGAGACACGGTGAGATCTaGGAACCACCAGAGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LCHVHLYTQRPDLTLNLERHGEI*EPPEPT Trigger: GGTGGGCTCTGGTGGTTCCAAGATCTCACCGTGTCT...CTCCAGGTTCAGTGTGAGATCCGGTCTCTGGGTATAAAGGTGGACGTGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS TCA 90 bp | GCATGTGGTTGTGGATCTTGGCTGCTTCTCGCTGGCCCTTCACAATaGGAGGAAAAACGAGGCATCGGGCAAGGACAGTACACGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ACGCGSWLLLAGPSQ*EEKRGIGQGQYTWQ Trigger: TTGCCACGTGTACTGTCCTTGCCCGATGCCTCGTTTTTCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAGCAGAGGGTTGTGCGTAAAAGTCTGTCGTAAGGGACCTGGGAGAAGACACAGGGAGAACACGTaGGAGGACAGCCAGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: CCSRGLCVKVCRKGPGRRHRENT*EDSQYM Trigger: CATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTG...TCTTCTCCCAGGTCCCTTACGACAGACTTTTACGCACAACCCTCTGCTGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
||
| CDS CCA 90 bp | TTCTGCATCTCTGGCATGTGGTTGTGGATCTTGGCTGCTTCTCGCTaGCCCTTCACAATGAGAGGAAAAACGAGGCATCGGGCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FCISGMWLWILAASR*PFTMRGKTRHRART Trigger: TGTCCTTGCCCGATGCCTCGTTTTTCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGCCAGAGATGCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCTTAAAGTATGGCTGGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGATCTCTGGCATGTGGTaGTGGATCTTGGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLKVWLVHAQRPEEGVRISGMW*WILAAS Trigger: AGAAGCAGCCAAGATCCACAACCACATGCCAGAGAT...CCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTTATTGATGCTGCTGTTGTaGCTGTTGGGAGCTTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSRAMLSFLPECRGFELLLMLLL*LLGAFG Trigger: CCCGAAAGCTCCCAACAGCAACAACAGCAGCATCAA...TAAGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | ATCAAGAAGCCCAGACAAGACAGGGGTTTACTAGTTCTGTGGATGGAAGGCTGCCACAGGGAGAACACGTaGGAGGACAGCCAGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: IKKPRQDRGLLVLWMEGCHRENT*EDSQYM Trigger: CATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTG...GCAGCCTTCCATCCACAGAACTAGTAAACCCCTGTCTTGTCTGGGCTTCTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCTTAAAGTATGGCTGGTGCATGCGCAGAGGCCAGAGGAGGGTGTCAGGTTCTTCCAGCCTTTTTaGAAGCTCTTCAAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLKVWLVHAQRPEEGVRFFQPF*KLFKKP Trigger: AGGCTTCTTGAAGAGCTTCAAAAAAGGCTGGAAGAA...CCTGACACCCTCCTCTGGCCTCTGCGCATGCACCAGCCATACTTTAAGAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGCAGGGCCATGCTCAGCTTTCTGCCTGAGTGCCGGGGATTTGAACTCTTATTCTTTGCGTTTGCTTaGATGCTGCTGTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRAMLSFLPECRGFELLFFAFA*MLLLLL Trigger: CAGCAACAACAGCAGCATCAAAGCAAACGCAAAGAA...TAAGAGTTCAAATCCCCGGCACTCAGGCAGAAAGCTGAGCATGGCCCTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS TCA 90 bp | GCCATCTCTCTCAAGGCAATAAAGAAGGAGATGAAGACGGGGGCCTaGGTGAGAGGTAGGATGAGCGGTCTCAAGAGTTTAATATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: AISLKAIKKEMKTGA*VRGRMSGLKSLISC Trigger: GCATGATATTAAACTCTTGAGACCGCTCATCCTACCTCTCACTCAGGCCCCCGTCTTCATCTCCTTCTTTATTGCCTTGAGAGAGATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS-3UTR CAA 90 bp | CCAAGGCTTCTTTGCGTTTGCTTTGATGCTGCTGTTGTTGCTGTTGGGAGCTTTTTCTTCCAGCCTTTTTaGAAGCTCTTCAAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRLLCVCFDAAVVAVGSFFFQPF*KLFKKP Trigger: AGGCTTCTTGAAGAGCTTCAAAAAAGGCTGGAAGAA...AAAGCTCCCAACAGCAACAACAGCAGCATCAAAGCAAACGCAAAGAAGCCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAGACTTCATAAATGGATGATGCAGACTGTGGCAGGAAGTAGGCCATTTGCTTTGATGCTGCTGTaGTTGCTGTTGGGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFRLHKWMMQTVAGSRPFALMLL*LLLGAF Trigger: GAAAGCTCCCAACAGCAACAACAGCAGCATCAAAGC...AAATGGCCTACTTCCTGCCACAGTCTGCATCATCCATTTATGAAGTCTGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
||
| CDS GCA 72 bp | AAGAGCACAGGGTGGCCGCCCGTTACCCCGGCGGGCTaGGAGGAGCTCGGCGGCCAGCGGTCTCAGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: KSTGWPPVTPAG*EELGGQRSQGH Trigger: GTGTCCCTGAGACCGCTGGCCGCCGAGCTCCTCGCAGCCCGCCGGGGTAACGGGCGGCCACCCTGTGCTCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | GCAGCGAGGAGTGAAGACGGCGAGAAGAGCACAGGGTaGCCGCCCGTTACCCCGGCGGGCTGCGAGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: AARSEDGEKSTG*PPVTPAGCEEL Trigger: GAGCTCCTCGCAGCCCGCCGGGGTAACGGGCGGCCACCCTGTGCTCTTCTCGCCGTCTTCACTCCTCGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS GCA 72 bp | GGCCTCTTACCCCTGGCAGCCAGGTCCAAGTGTTTCTaGATTCGCTGCTCCCGCTCTCGGAGCTGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLLPLAARSKCF*IRCSRSRSCCA Trigger: TGCACAGCAGCTCCGAGAGCGGGAGCAGCGAATGCAGAAACACTTGGACCTGGCTGCCAGGGGTAAGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228719.2 |
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| CDS CCA 72 bp | GAGGAAAAACGAGGCATCGGGCAAGGACAGTACACGTaGCAATGGCTCCCCACCACGGCAGGCCCAGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: EEKRGIGQGQYT*QWLPTTAGPGR Trigger: TCGACCTGGGCCTGCCGTGGTGGGGAGCCATTGCCACGTGTACTGTCCTTGCCCGATGCCTCGTTTTTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS GCA 72 bp | GGTCATGTACGACTCGCTGGGGGATCTTCAGCACTGTaGGCACAGCTGGAATCCGGAGGCAGGCTACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GHVRLAGGSSAL*AQLESGGRLLG Trigger: GCCAAGTAGCCTGCCTCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATCCCCCAGCGAGTCGTACATGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS CCA 72 bp | GATCTTGGAACCACCAGAGCCCACCTGTCTGGAGGCTaGGCACAGGCAGGTTGGCCATCTCTCTCAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: DLGTTRAHLSGG*AQAGWPSLSRQ Trigger: TTGCCTTGAGAGAGATGGCCAACCTGCCTGTGCCCAGCCTCCAGACAGGTGGGCTCTGGTGGTTCCAAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | GAGGACAGCCAGTACATGAACACTGCCGAGGGGAAGTaGATGGTCACAGGCAAGACCACCAGGGGCATCACC | + |
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Preference number: 6 (lower is better) Translates to: EDSQYMNTAEGK*MVTGKTTRGIT Trigger: GGTGATGCCCCTGGTGGTCTTGCCTGTGACCATCCACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS CCA 72 bp | ACTGTGCGCACAGCTGGAATCCGGAGGCAGGCTACTTaGCACAGGGAGAACACGTTGGAGGACAGCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: TVRTAGIRRQAT*HRENTLEDSQY Trigger: GTACTGGCTGTCCTCCAACGTGTTCTCCCTGTGCCAAGTAGCCTGCCTCCGGATTCCAGCTGTGCGCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS CAA 90 bp | GACTACCAGTGGCAAGACGTAGATGGGATCAGACACGGTGAGATCTaGGAACCACCAGAGCCCACCTGTCTGGAGGCTGGGCACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DYQWQDVDGIRHGEI*EPPEPTCLEAGHRQ Trigger: CTGCCTGTGCCCAGCCTCCAGACAGGTGGGCTCTGGTGGTTCCAAGATCTCACCGTGTCTGATCCCATCTACGTCTTGCCACTGGTAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 90 bp | ACAGCTGGAATCCGGAGGCAGGCTACTTGGCACAGGGAGAACACGTaGGAGGACAGCCAGTACATGAACACTGCCGAGGGGAAGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: TAGIRRQATWHRENT*EDSQYMNTAEGKWM Trigger: CATCCACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTGCCAAGTAGCCTGCCTCCGGATTCCAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS GCA 72 bp | AGCAGGAATAACAGGGGGTGCCTGGACCTGGGCTTCTaGAAAGAGGGTGGCAGATGTACTGATGCAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRNNRGCLDLGF*KEGGRCTDAAR Trigger: CCTCGCTGCATCAGTACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTATTCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 72 bp | TGGCAAGACGTAGATGGGATCAGACACGGTGAGATCTaGGAACCACCAGAGCCCACCTGTCTGGAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WQDVDGIRHGEI*EPPEPTCLEAG Trigger: CCCAGCCTCCAGACAGGTGGGCTCTGGTGGTTCCAAGATCTCACCGTGTCTGATCCCATCTACGTCTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 90 bp | GATCTTCAGCACTGTGCGCACAGCTGGAATCCGGAGGCAGGCTACTaGGCACAGGGAGAACACGTTGGAGGACAGCCAGTACATGAACAC | + |
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Preference number: 6 (lower is better) Translates to: DLQHCAHSWNPEAGY*AQGEHVGGQPVHEH Trigger: GTGTTCATGTACTGGCTGTCCTCCAACGTGTTCTCCCTGTGCCAAGTAGCCTGCCTCCGGATTCCAGCTGTGCGCACAGTGCTGAAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS GCA 72 bp | GGAGAACACGTTGGAGGACAGCCAGTACATGAACACTaGCGAGGGGAAGTGGATGGTCACAGGCAAGACCAC | + |
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Preference number: 6 (lower is better) Translates to: GEHVGGQPVHEH*RGEVDGHRQDH Trigger: GTGGTCTTGCCTGTGACCATCCACTTCCCCTCGGCAGTGTTCATGTACTGGCTGTCCTCCAACGTGTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS CCA 72 bp | GCAGGGATAGAGGTAGCAGGAATAACAGGGGGTGCCTaGACCTGGGCTTCTGCAAAGAGGGTGGCAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: AGIEVAGITGGA*TWASAKRVADV Trigger: TACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTATTCCTGCTACCTCTATCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS TCA 72 bp | CTACCAGTGGCAAGACGTAGATGGGATCAGACACGGTaGGATCTTGGAACCACCAGAGCCCACCTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPVARRRWDQTR*DLGTTRAHLSG Trigger: TCCAGACAGGTGGGCTCTGGTGGTTCCAAGATCTCACCGTGTCTGATCCCATCTACGTCTTGCCACTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | AGCCCCAGTTCTGTGAAGCTCGGTTCGGTAGCACACTaGACTACATCTGCAGCTCCTCCAGAAGCTACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPSSVKLGSVAH*TTSAAPPEATS Trigger: AGAGGTAGCTTCTGGAGGAGCTGCAGATGTAGTCCAGTGTGCTACCGAACCGAGCTTCACAGAACTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS TCA 72 bp | TGTGGATCTTGGCTGCTTCTCGCTGGCCCTTCACAATaGGAGGAAAAACGAGGCATCGGGCAAGGACAGTAC | + |
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Preference number: 6 (lower is better) Translates to: CGSWLLLAGPSQ*EEKRGIGQGQY Trigger: GTACTGTCCTTGCCCGATGCCTCGTTTTTCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | ATAGAGGTAGCAGGAATAACAGGGGGTGCCTGGACCTaGGCTTCTGCAAAGAGGGTGGCAGATGTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: IEVAGITGGAWT*ASAKRVADVLM Trigger: CATCAGTACATCTGCCACCCTCTTTGCAGAAGCCCAGGTCCAGGCACCCCCTGTTATTCCTGCTACCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | CTGGACTACATCTGCAGCTCCTCCAGAAGCTACCTCTaGTACTGCAGCAGGGATAGAGGTAGCAGGAATAAC | + |
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Preference number: 6 (lower is better) Translates to: LDYICSSSRSYL*YCSRDRGSRNN Trigger: GTTATTCCTGCTACCTCTATCCCTGCTGCAGTACCAGAGGTAGCTTCTGGAGGAGCTGCAGATGTAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CCA 72 bp | CTCAAGGACACACCACATTGTGGCAGTGACTACCAGTaGCAAGACGTAGATGGGATCAGACACGGTGAGATC | + |
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Preference number: 6 (lower is better) Translates to: LKDTPHCGSDYQ*QDVDGIRHGEI Trigger: GATCTCACCGTGTCTGATCCCATCTACGTCTTGCCACTGGTAGTCACTGCCACAATGTGGTGTGTCCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 90 bp | CGCTCTCGGAGCTGCTGTGCAATTTCAGCGTTCTTCCAGCCTTTTTaGAAGCTCTTCAAGAAGCCTTCCCTAGGAGGCAATTTGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSRSCCAISAFFQPF*KLFKKPSLGGNLSG Trigger: CCCTGACAAATTGCCTCCTAGGGAAGGCTTCTTGAAGAGCTTCAAAAAAGGCTGGAAGAACGCTGAAATTGCACAGCAGCTCCGAGAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS TCA 72 bp | CCAGGTCGACATGTATATATTCCAAGAGGTTCTGGATaGGACCCACCGGGGTGTAAGAACCAAGCCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PGRHVYIPRGSG*DPPGCKNQAPV Trigger: AACTGGGGCTTGGTTCTTACACCCCGGTGGGTCTCATCCAGAACCTCTTGGAATATATACATGTCGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS GCA 72 bp | CTTCTGCATCTCTGGCATGTGGTTGTGGATCTTGGCTaGTTCTCGCTGGCCCTTCACAATGAGAGGAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LLHLWHVVVDLG*FSLALHNERKN Trigger: GTTTTTCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGCCAGAGATGCAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 72 bp | GAAAACTTCTGCATCTCTGGCATGTGGTTGTGGATCTaGGCTGCTTCTCGCTGGCCCTTCACAATGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ENFCISGMWLWI*AASRWPFTMRG Trigger: TCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGCCAGAGATGCAGAAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 72 bp | TTGAAGCTCTTCAAGAAGCCTTCCCTAGGAGGCAATTaGTCAGGGTCATGTACGACTCGCTGGGGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LKLFKKPSLGGN*SGSCTTRWGIF Trigger: GAAGATCCCCCAGCGAGTCGTACATGACCCTGACAAATTGCCTCCTAGGGAAGGCTTCTTGAAGAGCTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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| CDS TCA 72 bp | CTCAAGGCAATAAAGAAGGAGATGAAGACGGGGGCCTaGGTGAGAGGTAGGATGAGCGGTCTCAAGAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LKAIKKEMKTGA*VRGRMSGLKSL Trigger: TAAACTCTTGAGACCGCTCATCCTACCTCTCACTCAGGCCCCCGTCTTCATCTCCTTCTTTATTGCCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000985.7 |
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| CDS CAA 72 bp | AGCTGCTGTGCAATTTCAGCGTTCTTCCAGCCTTTTTaGAAGCTCTTCAAGAAGCCTTCCCTAGGAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SCCAISAFFQPF*KLFKKPSLGGN Trigger: ATTGCCTCCTAGGGAAGGCTTCTTGAAGAGCTTCAAAAAAGGCTGGAAGAACGCTGAAATTGCACAGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000985.7 ENSMUST00000228719.2 |
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