Pregenerated sensors for OVOL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037279Ensembl transcript IDs: ENSMUST00000037423.4, ENSMUST00000103171.10
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATaGCTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAAAAG | + |
|
Preference number: 1 (lower is better) Translates to: TSATKKQFTGPVVAE*LTTLGCFLLLLSQK Trigger: CTTTTGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR TCA 90 bp | CAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGACTaGCAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAAAAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: QPPRNNSQGLLWQND*QLWGASYCCCPKRR Trigger: TCTTCTTTTGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR GCA 90 bp | GTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGGGTGCTTCTTACTGTTaGTGTCCCAAAAGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VCDLSHQETIHRACCGRMGASYC*CPKRRE Trigger: CTCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACC...CATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACACCTCCTGTTGTGGCAGAATaGCTGACAACTTTGGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: CMGSISRHLKMTVSLRTPPVVAE*LTTLGC Trigger: GCACCCCAAAGTTGTCAGTCATTCTGCCACAACAGG...AGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGAAGAATATACATTTTCCTTGCATGGGAAGCATTTCAAGGCACCTTAAGCCTGTTGTGGCAGAATaGCTGACAACTTTGGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FQKNIHFPCMGSISRHLKPVVAE*LTTLGC Trigger: GCACCCCAAAGTTGTCAGTCATTCTGCCACAACAGG...CTTAAGGTGCCTTGAAATGCTTCCCATGCAAGGAAAATGTATATTCTTCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGCATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACAGGTGCTTCTTACTGTTaGTGTCCCAAAAGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PCMGSISRHLKMTVSLRTGASYC*CPKRRE Trigger: CTCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACC...TGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCATGCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACACCTAAAAGAAGAGAGAGGTaGACTGAATATGAAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: CMGSISRHLKMTVSLRTPKRRER*TEYEKI Trigger: GATCTTTTCATATTCAGTCCACCTCTCTCTTCTTTT...AGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACACCTCTCAAAAGAAGAGAGAGGTaGACTGAATATGAAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: MGSISRHLKMTVSLRTPLKRRER*TEYEKI Trigger: GATCTTTTCATATTCAGTCCACCTCTCTCTTCTTTT...GAGAGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGACTGACAACGGGTGCTTCTTACTGTaGCTGTCCCAAAAGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSHQETIHRACCGRMTDNGCFLL*LSQKKR Trigger: TCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACCC...GTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR TCA 72 bp | ACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATaGCTGACAACTTTGGGGTGCTTCTTACTGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKKQFTGPVVAE*LTTLGCFLLLL Trigger: CAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACACCTCTCGGGTGCTTCTTACTGTaGCTGTCCCAAAAGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MGSISRHLKMTVSLRTPLGCFLL*LSQKKR Trigger: TCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACCC...GAGAGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | AAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCCCCCGGCGCTGCTGCTaGAGCCGCTGCTACTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVCDLSHQETIHRACCGPRRCC*SRCYCR Trigger: GCGGCAGTAGCAGCGGCTGCAGCAGCAGCGCCGGGG...GCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGACTGACAACCCCCGGCGCTGCTGCTaGAGCCGCTGCTACTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHQETIHRACCGRMTDNPRRCC*SRCYCR Trigger: GCGGCAGTAGCAGCGGCTGCAGCAGCAGCGCCGGGG...GTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | ACACACAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTACAGGTCCTCCTGGGTaGGGCCCGTGTAGCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: THRNPYVTSATKKQFTGPTGPPG*GPCSRN Trigger: ATTGCGGCTACACGGGCCCCACCCAGGAGGACCTGT...AGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGCAGAATGACTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAACAGGTCCTCCTGGGTaGGGCCCGTGTAGCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCGRMTDNFGVLLTVAVPTGPPG*GPCSRN Trigger: ATTGCGGCTACACGGGCCCCACCCAGGAGGACCTGT...TGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR TCA 90 bp | AAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGGAACACCGCTGGGTaGAGGCCTTGTTACACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVCDLSHQETIHRACCGRNTAG*RPCYTP Trigger: AGGTGTGTAACAAGGCCTTCACCCAGCGGTGTTCCT...GCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR TCA 90 bp | ACACACAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTAGGAACACCGCTGGGTaGAGGCCTTGTTACACACCT | + |
|
Preference number: 4 (lower is better) Translates to: THRNPYVTSATKKQFTGPRNTAG*RPCYTP Trigger: AGGTGTGTAACAAGGCCTTCACCCAGCGGTGTTCCT...AGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | CCTTGCATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACAGGAGCTCATCCCAGCTaGGGACAGAGACTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCMGSISRHLKMTVSLRTGAHPS*GQRLPG Trigger: GCCCGGGAGTCTCTGTCCGCAGCTGGGATGAGCTCC...TGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCATGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGACTGACAACCCTTGCCGCAGAAGGTaGACAGGTGCCTCTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHQETIHRACCGRMTDNPCRRR*TGASLP Trigger: AGGTAAAGAGGCACCTGTGCACCTTCTGCGGCAAGG...GTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | CAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTCCTTGCCGCAGAAGGTaGACAGGTGCCTCTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPVCDLSHQETIHRACCPCRRR*TGASLP Trigger: AGGTAAAGAGGCACCTGTGCACCTTCTGCGGCAAGG...ACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGACTGACAACACAGCCCAGGCTCACTaGGATGTAAGTGTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHQETIHRACCGRMTDNTAQAH*DVSVCP Trigger: AGGGCAGACACTTACATCCCAGTGAGCCTGGGCTGT...GTTGTCAGTCATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGCAGAATGACTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCACCTCTTCACTCAGGGTaGAATTCTCCTGCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCGRMTDNFGVLLTVAVPPLHSG*NSPAAG Trigger: CCCCGCTGCAGGAGAATTCCACCCTGAGTGAAGAGG...TGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | CAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTCAGAAGGTGCACAGGTaGCTCTTTACCTGGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKPVCDLSHQETIHRACCQKVHR*LFTWLW Trigger: CCACAACCAGGTAAAGAGGCACCTGTGCACCTTCTG...ACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | CAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTTGGGATGTAAGTGTCTaGCCTTTTGTCATCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKPVCDLSHQETIHRACCWDVSV*PFVIRE Trigger: CTCCCGGATGACAAAAGGGCAGACACTTACATCCCA...ACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS-3UTR GCA 90 bp | ACACACAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTTGGTCACTGTTCACATaGAGATACAGGTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THRNPYVTSATKKQFTGPWSLFT*RYRSSW Trigger: CCAGGAGGACCTGTATCTGCATGTGAACAGTGACCA...AGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | ACACACAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTAATGTGCTCCCTGGATaGTCACTGTTCACATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRNPYVTSATKKQFTGPNVLPG*SLFTCR Trigger: TCTGCATGTGAACAGTGACCATCCAGGGAGCACATT...AGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGAGAAATGTGCTCCCTaGATGGTCACTGTTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: QKPVCDLSHQETIHRACCEKCAP*MVTVHM Trigger: CATGTGAACAGTGACCATCCAGGGAGCACATTTCTC...ACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAGCATTTCAAGGCACCTTAAGATGACAGTCTCTTTAAGAACACCTCTCCCTCTTCACTCAGGGTaGAATTCTCCTGCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MGSISRHLKMTVSLRTPLPLHSG*NSPAAG Trigger: CCCCGCTGCAGGAGAATTCCACCCTGAGTGAAGAGG...GAGAGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCTTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR TCA 90 bp | GTATGTGACCTCAGCCACCAAGAAACAATTCACAGGGCCTGTTGTGGCAGAATGCAAAGGTCACAGTTGTaGATCACAGAGTTGTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCDLSHQETIHRACCGRMQRSQL*ITELSH Trigger: ATGCGACAACTCTGTGATTCACAACTGTGACCTTTG...CATTCTGCCACAACAGGCCCTGTGAATTGTTTCTTGGTGGCTGAGGTCACATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | ACTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAAAAGAAGAGAGAGGTTGGATCTTCTTTAGGTaGGACTCCAAGGAACACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TDNFGVLLTVAVPKEERGWIFFR*DSKEHR Trigger: GCGGTGTTCCTTGGAGTCCCACCTAAAGAAGATCCA...ACCTCTCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | GACAGACACACATACACACAGAAACCCGTATGTGACCTCAGCCACCAAGAAACAAATGTGCTCCCTGGATaGTCACTGTTCACATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRHTYTQKPVCDLSHQETNVLPG*SLFTCR Trigger: TCTGCATGTGAACAGTGACCATCCAGGGAGCACATT...TGTTTCTTGGTGGCTGAGGTCACATACGGGTTTCTGTGTGTATGTGTGTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGCAGAATGACTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAGAGAAATGTGCTCCCTaGATGGTCACTGTTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: CCGRMTDNFGVLLTVAVPEKCAP*MVTVHM Trigger: CATGTGAACAGTGACCATCCAGGGAGCACATTTCTC...TGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAGTCATTCTGCCACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR TCA 90 bp | CTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAAAAGAAGAGAGAGGTGCAAAGGTCACAGTTGTaGATCACAGAGTTGTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTTLGCFLLLLSQKKREVQRSQL*ITELSH Trigger: ATGCGACAACTCTGTGATTCACAACTGTGACCTTTG...CACCTCTCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR TCA 90 bp | CTGACAACTTTGGGGTGCTTCTTACTGTTGCTGTCCCAAAAGAAGAGAGAGGTGTTTTGGAAGTCTTTTTaGGAAATGTGCTCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTTLGCFLLLLSQKKREVFWKSF*EMCSLD Trigger: ATCCAGGGAGCACATTTCTCAAAAAGACTTCCAAAA...CACCTCTCTCTTCTTTTGGGACAGCAACAGTAAGAAGCACCCCAAAGTTGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAAGAATATACATTTTCCTTGCATGGGAAGCATTTCAAGGCACCTTAAGTGGTCACTGTTCACATaGAGATACAGGTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQKNIHFPCMGSISRHLKWSLFT*RYRSSW Trigger: CCAGGAGGACCTGTATCTGCATGTGAACAGTGACCA...CTTAAGGTGCCTTGAAATGCTTCCCATGCAAGGAAAATGTATATTCTTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAAGAATATACATTTTCCTTGCATGGGAAGCATTTCAAGGCACCTTAAGTGGATCTTCTTTAGGTaGGACTCCAAGGAACACCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQKNIHFPCMGSISRHLKWIFFR*DSKEHR Trigger: GCGGTGTTCCTTGGAGTCCCACCTAAAGAAGATCCA...CTTAAGGTGCCTTGAAATGCTTCCCATGCAAGGAAAATGTATATTCTTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS GCA 90 bp | CGGCCCCTCCGGGCTCCCCGGCGCTGCTGCTGCAGCCGCTGCTACTaGCGCCGTCGCTGCGGCAGTCTTCGGGCGGGTCGCGGAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLRAPRRCCCSRCY*RRRCGSLRAGRGAD Trigger: GTCTGCTCCGCGACCCGCCCGAAGACTGCCGCAGCGACGGCGGCAGTAGCAGCGGCTGCAGCAGCAGCGCCGGGGAGCCCGGAGGGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS GCA 90 bp | TGCTTTCGGCCCCTCCGGGCTCCCCGGCGCTGCTGCTGCAGCCGCTaGTACTGCCGCCGTCGCTGCGGCAGTCTTCGGGCGGGTCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFRPLRAPRRCCCSR*YCRRRCGSLRAGRG Trigger: TCCGCGACCCGCCCGAAGACTGCCGCAGCGACGGCGGCAGTAGCAGCGGCTGCAGCAGCAGCGCCGGGGAGCCCGGAGGGGCCGAAAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS GCA 90 bp | TTGACCTGGCAACCGGGCGCTGCATCGCTGCCAGATGTCCATCGGTaGCTTGGGCGTCGTGAAGCTCTGGAGTTTCAGGCTCCGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTWQPGAASLPDVHR*LGRREALEFQAPAR Trigger: GCGCGCCGGAGCCTGAAACTCCAGAGCTTCACGACGCCCAAGGCACCGATGGACATCTGGCAGCGATGCAGCGCCCGGTTGCCAGGTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CCA 90 bp | GCGGCAGTCTTCGGGCGGGTCGCGGAGCAGACAGCCCAGGCTCACTaGGATGTAAGTGTCTGCCCTTTTGTCATCCGGGAGCTCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVFGRVAEQTAQAH*DVSVCPFVIRELIP Trigger: TGGGATGAGCTCCCGGATGACAAAAGGGCAGACACTTACATCCCAGTGAGCCTGGGCTGTCTGCTCCGCGACCCGCCCGAAGACTGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS GCA 90 bp | CGGGTCGCGGAGCAGACAGCCCAGGCTCACTGGGATGTAAGTGTCTaGCCTTTTGTCATCCGGGAGCTCATCCCAGCTGCGGACAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RVAEQTAQAHWDVSV*PFVIRELIPAADRD Trigger: GTCTCTGTCCGCAGCTGGGATGAGCTCCCGGATGACAAAAGGGCAGACACTTACATCCCAGTGAGCCTGGGCTGTCTGCTCCGCGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS GCA 90 bp | GGATGTAAGTGTCTGCCCTTTTGTCATCCGGGAGCTCATCCCAGCTaGGGACAGAGACTCCCGGGCTCCTCCTCTTCACCAAAAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: GCKCLPFCHPGAHPS*GQRLPGSSSSPKRL Trigger: AAGTCTTTTTGGTGAAGAGGAGGAGCCCGGGAGTCTCTGTCCGCAGCTGGGATGAGCTCCCGGATGACAAAAGGGCAGACACTTACATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS TCA 90 bp | GTGAATCACAGAGTTGTCGCATGTGCCGGTGGTAAACTTGATTTTTaGCCTGGCAACCGGGCGCTGCATCGCTGCCAGATGTCCATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VNHRVVACAGGKLDF*PGNRALHRCQMSIG Trigger: ACCGATGGACATCTGGCAGCGATGCAGCGCCCGGTTGCCAGGTCAAAAATCAAGTTTACCACCGGCACATGCGACAACTCTGTGATTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS GCA 72 bp | ACGAGCTGCTTTCGGCCCCTCCGGGCTCCCCGGCGCTaGTGCTGCAGCCGCTGCTACTGCCGCCGTCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSCFRPLRAPRR*CCSRCYCRRRC Trigger: GCAGCGACGGCGGCAGTAGCAGCGGCTGCAGCAGCAGCGCCGGGGAGCCCGGAGGGGCCGAAAGCAGCTCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CAA 90 bp | CCTGGCAACCGGGCGCTGCATCGCTGCCAGATGTCCATCGGTGCCTaGGGCGTCGTGAAGCTCTGGAGTTTCAGGCTCCGGCGCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGNRALHRCQMSIGA*GVVKLWSFRLRRAR Trigger: CCGCGCGCGCCGGAGCCTGAAACTCCAGAGCTTCACGACGCCCAAGGCACCGATGGACATCTGGCAGCGATGCAGCGCCCGGTTGCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CAA 72 bp | CGGGCGCTGCATCGCTGCCAGATGTCCATCGGTGCCTaGGGCGTCGTGAAGCTCTGGAGTTTCAGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RALHRCQMSIGA*GVVKLWSFRLR Trigger: CCGGAGCCTGAAACTCCAGAGCTTCACGACGCCCAAGGCACCGATGGACATCTGGCAGCGATGCAGCGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS GCA 72 bp | CAACCGGGCGCTGCATCGCTGCCAGATGTCCATCGGTaGCTTGGGCGTCGTGAAGCTCTGGAGTTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPGAASLPDVHR*LGRREALEFQA Trigger: AGCCTGAAACTCCAGAGCTTCACGACGCCCAAGGCACCGATGGACATCTGGCAGCGATGCAGCGCCCGGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CCA 72 bp | TTCGGGCGGGTCGCGGAGCAGACAGCCCAGGCTCACTaGGATGTAAGTGTCTGCCCTTTTGTCATCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FGRVAEQTAQAH*DVSVCPFVIRE Trigger: CTCCCGGATGACAAAAGGGCAGACACTTACATCCCAGTGAGCCTGGGCTGTCTGCTCCGCGACCCGCCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS GCA 72 bp | GAGCAGACAGCCCAGGCTCACTGGGATGTAAGTGTCTaGCCTTTTGTCATCCGGGAGCTCATCCCAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EQTAQAHWDVSV*PFVIRELIPAA Trigger: CGCAGCTGGGATGAGCTCCCGGATGACAAAAGGGCAGACACTTACATCCCAGTGAGCCTGGGCTGTCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037423.4 |
||
| CDS CCA 72 bp | GGTCACTGTTCACATGCAGATACAGGTCCTCCTGGGTaGGGCCCGTGTAGCCGCAATCCTCACACACGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GHCSHADTGPPG*GPCSRNPHTRR Trigger: TCTACGTGTGTGAGGATTGCGGCTACACGGGCCCCACCCAGGAGGACCTGTATCTGCATGTGAACAGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS TCA 72 bp | AGAGTTGTCGCATGTGCCGGTGGTAAACTTGATTTTTaGCCTGGCAACCGGGCGCTGCATCGCTGCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RVVACAGGKLDF*PGNRALHRCQM Trigger: CATCTGGCAGCGATGCAGCGCCCGGTTGCCAGGTCAAAAATCAAGTTTACCACCGGCACATGCGACAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CAA 72 bp | CTCAGGGTGGAATTCTCCTGCAGCGGGGACGTCAGCTaGTTCTGCATAAGGGCCGCCAACTTTTTGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRVEFSCSGDVS*FCIRAANFLEV Trigger: GACTTCCAAAAAGTTGGCGGCCCTTATGCAGAACAAGCTGACGTCCCCGCTGCAGGAGAATTCCACCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||
| CDS CCA 72 bp | TTTTTGGAAGTCTTTTTGAGAAATGTGCTCCCTGGATaGTCACTGTTCACATGCAGATACAGGTCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLEVFLRNVLPG*SLFTCRYRSSW Trigger: CCAGGAGGACCTGTATCTGCATGTGAACAGTGACCATCCAGGGAGCACATTTCTCAAAAAGACTTCCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037423.4 ENSMUST00000103171.10 |
||