Pregenerated sensors for OVOL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024922Ensembl transcript IDs: ENSMUST00000025861.3, ENSMUST00000238060.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAAAGGGCAGAGAGCCCTTGGAACCCTGAGAGTTAGCCCTGCATaGACGAGGGCCGCTGCCAGCACCACTGCGGTTGTTTGCCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: MKGQRALGTLRVSPA*TRAAASTTAVVCRD Trigger: ATCCCGGCAAACAACCGCAGTGGTGCTGGCAGCGGCCCTCGTGCATGCAGGGCTAACTCTCAGGGTTCCAAGGGCTCTCTGCCCTTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 90 bp | GCCGCTGCCAGCACCACTGCGGTTGTTTGCCGGGATGCTCTTTGCTaGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTGCCCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: AAASTTAVVCRDALC*CLHPALQGNPLPIL Trigger: CAAGATGGGCAATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTGCTGGCAGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 90 bp | CACTCCTGCTGGGACACAAACACCTATGGTCCCAAGCTCAGGGTGTaGTCTGCCTGTAAGACAGACTCCCCAAACAGAGCAGAAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: HSCWDTNTYGPKLRV*SACKTDSPNRAEVS Trigger: ACTGACTTCTGCTCTGTTTGGGGAGTCTGTCTTACAGGCAGAGCACACCCTGAGCTTGGGACCATAGGTGTTTGTGTCCCAGCAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 90 bp | CCTCGGATGCACGAGACATACACCCTTTTGACCCACAGCCCTTTTTaGTCTCAGCAGGATACCCAGACACACCAGTGGACAAAGACTCCC | + |
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Preference number: 1 (lower is better) Translates to: PRMHETYTLLTHSPF*SQQDTQTHQWTKTP Trigger: GGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAAGGGCTGTGGGTCAAAAGGGTGTATGTCTCGTGCATCCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR TCA 90 bp | AAACAGAGCAGAAGTCAGTGCCCAATTGTGCAAGTGTGCCTGGAGTaGGGTGTTAGAGCGCTGGTCCCAGTCACTGGTGTTCTAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KQSRSQCPIVQVCLE*GVRALVPVTGVLAR Trigger: TCTTGCTAGAACACCAGTGACTGGGACCAGCGCTCTAACACCTCACTCCAGGCACACTTGCACAATTGGGCACTGACTTCTGCTCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 90 bp | CAAAGCAGGAGGAAGGTCTTTAATGAAACATCTCAGAGAACAGGGTaGGTCTGCAAAACCACCCCAGGACCAAGGCACAGAGGAGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: QSRRKVFNETSQRTG*VCKTTPGPRHRGGL Trigger: CAAACCTCCTCTGTGCCTTGGTCCTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCTTCCTCCTGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 90 bp | AGGAGGAAGGTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTaGAAAACCACCCCAGGACCAAGGCACAGAGGAGGTTTGAAATGT | + |
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Preference number: 1 (lower is better) Translates to: RRKVFNETSQRTGWV*KTTPGPRHRGGLKC Trigger: ACATTTCAAACCTCCTCTGTGCCTTGGTCCTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCTTCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 90 bp | GCTTATGATGGCCCCAGATTGGCAACGAGCTTACAGACACAAAGATaGCAACACAGTGCTTCTGGACAAGGTGAGTTCTTACATTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AYDGPRLATSLQTQR*QHSASGQGEFLHSE Trigger: CTCTGAATGTAAGAACTCACCTTGTCCAGAAGCACTGTGTTGGCATCTTTGTGTCTGTAAGCTCGTTGCCAATCTGGGGCCATCATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 90 bp | CTCCTTGGCACCTTATGGTTGGTTTCTTACGAACGAGGCAATAAGTaGAAAGACCAAGAGCGCACATGCACACGTGAAGAAATCACACAC | + |
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Preference number: 1 (lower is better) Translates to: LLGTLWLVSYERGNK*KDQERTCTREEITH Trigger: GTGTGTGATTTCTTCACGTGTGCATGTGCGCTCTTGGTCTTTCCACTTATTGCCTCGTTCGTAAGAAACCAACCATAAGGTGCCAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTTTGCAGGAAGGTGAATaGCTGGGCAGCAGGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LPGCSLLVSPSCSPGESILQEGE*LGSREV Trigger: CACTTCCCTGCTGCCCAGCCATTCACCTTCCTGCAA...AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | AGACACACCAGTGGACAAAGACTCCCTCCCTCAGAGGAGCTACTCGGTTCAAAGAGAACAGGGTGGGTCTaGAAAACCACCCCAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: RHTSGQRLPPSEELLGSKRTGWV*KTTPGP Trigger: TGGTCCTGGGGTGGTTTTGCAGACCCACCCTGTTCT...CTTTGAACCGAGTAGCTCCTCTGAGGGAGGGAGTCTTTGTCCACTGGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGGTCTCAGCAGGATACCCAGACACACCAGTGGACAAAGACTCCCTCCCTCTGGTGTCTCCATCCTaGTCTCCAGGGGAATCCATT | + |
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Preference number: 2 (lower is better) Translates to: FLVSAGYPDTPVDKDSLPLVSPS*SPGESI Trigger: AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAG...AGGGAGGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTACATCTGCAAAGTTTTaGTGCAAGGAAACAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPGCSLLVSPSCSPGESITSAKF*CKETGP Trigger: AGGCCCTGTTTCCTTGCAGCAAAACTTTGCAGATGT...AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGGTCTCAGCAGGATACCCAGACACACCAGTGGACAAAGACTCCCTCCCTTGTCCTCACTCCTGCTaGGACACAAACACCTATGGT | + |
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Preference number: 2 (lower is better) Translates to: FLVSAGYPDTPVDKDSLPCPHSC*DTNTYG Trigger: ACCATAGGTGTTTGTGTCCCAGCAGGAGTGAGGACA...AGGGAGGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGAGCTACTCGGTTCAAAGGCATTTGGAAAACAGAAGTAAGACAACAGAGCGGGATGCTCTTTGCTaGTGTCTCCATCCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QRSYSVQRHLENRSKTTERDALC*CLHPAL Trigger: GAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCG...CTCTGTTGTCTTACTTCTGTTTTCCAAATGCCTTTGAACCGAGTAGCTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAATAAGTGGAAAGACCAAGAGCGCACATGCACACGTGAAGAAATCACACGTAAGTGGTTCTTCTTaGTCACTTGTCCTCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: EAISGKTKSAHAHVKKSHVSGSS*SLVLTP Trigger: AGGAGTGAGGACAAGTGAGCAAGAAGAACCACTTAC...GTGTGATTTCTTCACGTGTGCATGTGCGCTCTTGGTCTTTCCACTTATTGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGAGCTACTCGGTTCAAAGGCATTTGGAAAACAGAAGTAAGACAACAGAGGGAATAGTCCATCTCTaGGCAAAGCAGGAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: QRSYSVQRHLENRSKTTEGIVHL*AKQEEG Trigger: ACCTTCCTCCTGCTTTGCCCAGAGATGGACTATTCC...CTCTGTTGTCTTACTTCTGTTTTCCAAATGCCTTTGAACCGAGTAGCTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CCA 90 bp | AGACACACCAGTGGACAAAGACTCCCTCCCTCAGAGGAGCTACTCGGTTCAAAGGCCTCTCAAAGTTTCTaGTATGTGGATTATTATTCT | + |
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Preference number: 2 (lower is better) Translates to: RHTSGQRLPPSEELLGSKASQSF*YVDYYS Trigger: AGAATAATAATCCACATACCAGAAACTTTGAGAGGC...CTTTGAACCGAGTAGCTCCTCTGAGGGAGGGAGTCTTTGTCCACTGGTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 90 bp | CTTACAAAACAAGACAGACAACATAAAGCTTATGATGGCCCCAGATaGGCAACGAGCTTACAGACACAAAGATGCCAACACAGTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LTKQDRQHKAYDGPR*ATSLQTQRCQHSAS Trigger: AGAAGCACTGTGTTGGCATCTTTGTGTCTGTAAGCTCGTTGCCAATCTGGGGCCATCATAAGCTTTATGTTGTCTGTCTTGTTTTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCCTCTCAAAGTTTCTGGTATGTGGATTATTATTCTGCCTCAAATTTTGCCCCAAGCTCAGGGTGTaGTCTGCCTGTAAGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: ISLSKFLVCGLLFCLKFCPKLRV*SACKTD Trigger: GTCTGTCTTACAGGCAGAGCACACCCTGAGCTTGGG...GCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAACTTTGAGAGGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAATACAGAAAGTATTAGTTCTCTCACTTTACTAGTTGGACGGGTGCTTACAGGTTGTTTGCCGGGATaGTCTTTGCTGGTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RNTESISSLTLLVGRVLTGCLPG*SLLVSP Trigger: TGGAGACACCAGCAAAGAGCATCCCGGCAAACAACC...TGTAAGCACCCGTCCAACTAGTAAAGTGAGAGAACTAATACTTTCTGTATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAATACAGAAAGTATTAGTTCTCTCACTTTACTAGTTGGACGGGTGCTTACACTCCCAGCCTGTTCTTaGCCTTGCCTTAGTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: RNTESISSLTLLVGRVLTLPACS*PCLSTS Trigger: TGAAGTACTAAGGCAAGGGCAAGAACAGGCTGGGAG...TGTAAGCACCCGTCCAACTAGTAAAGTGAGAGAACTAATACTTTCTGTATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAATACAGAAAGTATTAGTTCTCTCACTTTACTAGTTGGACGGGTGCTTACAACTTGTCCTCACTCCTaGTGGGACACAAACACCTAT | + |
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Preference number: 2 (lower is better) Translates to: RNTESISSLTLLVGRVLTTCPHS*WDTNTY Trigger: ATAGGTGTTTGTGTCCCAGCAGGAGTGAGGACAAGT...TGTAAGCACCCGTCCAACTAGTAAAGTGAGAGAACTAATACTTTCTGTATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | CAGAGAGCCCTTGGAACCCTGAGAGTTAGCCCTGCATaGACGAGGGCCGCTGCCAGCACCACTGCGGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: QRALGTLRVSPA*TRAAASTTAVV Trigger: AACAACCGCAGTGGTGCTGGCAGCGGCCCTCGTGCATGCAGGGCTAACTCTCAGGGTTCCAAGGGCTCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | GCCAGCACCACTGCGGTTGTTTGCCGGGATGCTCTTTaGTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCA | + |
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Preference number: 3 (lower is better) Translates to: ASTTAVVCRDAL*WCLHPALQGNP Trigger: TGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | AGCACCACTGCGGTTGTTTGCCGGGATGCTCTTTGCTaGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTG | + |
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Preference number: 3 (lower is better) Translates to: STTAVVCRDALC*CLHPALQGNPL Trigger: CAATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | ACCTGTGTGCTTATGACATCAGTAACGTGGGGGAGGTaGGACTGTTTGGCATTCAGGGGCTTCCCAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: TCVLMTSVTWGR*DCLAFRGFPAC Trigger: GCAGGCTGGGAAGCCCCTGAATGCCAAACAGTCCCACCTCCCCCACGTTACTGATGTCATAAGCACACAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | GCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTaGCCATCTTGTACTCAGGACCCCCTCTTAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: AGVSILLSRGIH*PSCTQDPLLAH Trigger: ATGTGCTAAGAGGGGGTCCTGAGTACAAGATGGGCAATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | CCTTTTTGGTCTCAGCAGGATACCCAGACACACCAGTaGACAAAGACTCCCTCCCTCAGAGGAGCTACTCGG | + |
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Preference number: 3 (lower is better) Translates to: PFWSQQDTQTHQ*TKTPSLRGATR Trigger: CCGAGTAGCTCCTCTGAGGGAGGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CAA 90 bp | CACACAGAGCAGTGTGACATACACGCGGCTGTTCACATGTGGGTCTCTGATGAACACCACTGCGGTTGTTaGCCGGGATGCTCTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: HTEQCDIHAAVHMWVSDEHHCGC*PGCSLL Trigger: CAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTG...TTCATCAGAGACCCACATGTGAACAGCCGCGTGTATGTCACACTGCTCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR TCA 72 bp | AGAAGTCAGTGCCCAATTGTGCAAGTGTGCCTGGAGTaGGGTGTTAGAGCGCTGGTCCCAGTCACTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: RSQCPIVQVCLE*GVRALVPVTGV Trigger: AACACCAGTGACTGGGACCAGCGCTCTAACACCTCACTCCAGGCACACTTGCACAATTGGGCACTGACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | TGTTTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTaGTCTCCAGGGGAATCCATTGCCCATCTTGTACTC | + |
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Preference number: 3 (lower is better) Translates to: CLPGCSLLVSPS*SPGESIAHLVL Trigger: GAGTACAAGATGGGCAATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | TTAGACTTGGTGTCGAATCGCCATCGCCATCCCATTTaGTTGAGGAGCATCAGTAGGACCCACCGTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LDLVSNRHRHPI*LRSISRTHRQP Trigger: AGGCTGACGGTGGGTCCTACTGATGCTCCTCAAGCAAATGGGATGGCGATGGCGATTCGACACCAAGTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | AGATCCTGCACCTGTGTGCTTATGACATCAGTAACGTaGGGGAGGTGGGACTGTTTGGCATTCAGGGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSCTCVLMTSVT*GRWDCLAFRGF Trigger: GAAGCCCCTGAATGCCAAACAGTCCCACCTCCCCCACGTTACTGATGTCATAAGCACACAGGTGCAGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | AAGTGGTTCTTCTTGCTCACTTGTCCTCACTCCTGCTaGGACACAAACACCTATGGTCCCAAGCTCAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: KWFFLLTCPHSC*DTNTYGPKLRV Trigger: CACCCTGAGCTTGGGACCATAGGTGTTTGTGTCCCAGCAGGAGTGAGGACAAGTGAGCAAGAAGAACCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CCA 72 bp | CACGAGACATACACCCTTTTGACCCACAGCCCTTTTTaGTCTCAGCAGGATACCCAGACACACCAGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: HETYTLLTHSPF*SQQDTQTHQWT Trigger: TGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAAGGGCTGTGGGTCAAAAGGGTGTATGTCTCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CAA 90 bp | GACTTGGTGTCGAATCGCCATCGCCATCCCATTTGCTTGAGGAGCATCAGTAGGTGTTCTAGCAAGAGGTaGCAGGAAGGTGAATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DLVSNRHRHPICLRSISRCSSKR*QEGEWL Trigger: CAGCCATTCACCTTCCTGCAACCTCTTGCTAGAACA...CCTACTGATGCTCCTCAAGCAAATGGGATGGCGATGGCGATTCGACACCAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | GTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTaGAAAACCACCCCAGGACCAAGGCACAGAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: VFNETSQRTGWV*KTTPGPRHRGG Trigger: ACCTCCTCTGTGCCTTGGTCCTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CAA 90 bp | CACACAGAGCAGTGTGACATACACGCGGCTGTTCACATGTGGGTCTCTGATGAATGTAAGTGGTTCTTCTaGCTCACTTGTCCTCACTCC | + |
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Preference number: 3 (lower is better) Translates to: HTEQCDIHAAVHMWVSDECKWFF*LTCPHS Trigger: GGAGTGAGGACAAGTGAGCAAGAAGAACCACTTACA...TTCATCAGAGACCCACATGTGAACAGCCGCGTGTATGTCACACTGCTCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR TCA 72 bp | GACACAAAGATGCCAACACAGTGCTTCTGGACAAGGTaGGTTCTTACATTCAGAGTGCAGCAGCCCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: DTKMPTQCFWTR*VLTFRVQQPRH Trigger: GTGTCTGGGCTGCTGCACTCTGAATGTAAGAACTCACCTTGTCCAGAAGCACTGTGTTGGCATCTTTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | AAGGAAACAGGGCCTGTCTCTGTAAGTGGTTCTTCTTaGTCACTTGTCCTCACTCCTGCTGGGACACAAACA | + |
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Preference number: 3 (lower is better) Translates to: KETGPVSVSGSS*SLVLTPAGTQT Trigger: TGTTTGTGTCCCAGCAGGAGTGAGGACAAGTGAGCAAGAAGAACCACTTACAGAGACAGGCCCTGTTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | AGAAAAACACCTAGACTCCCAGCCTGTTCTTGCCCTTaGCTTAGTACTTCAGATGTGGACTTAGACTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: RKTPRLPACSCP*LSTSDVDLDLV Trigger: CACCAAGTCTAAGTCCACATCTGAAGTACTAAGGCAAGGGCAAGAACAGGCTGGGAGTCTAGGTGTTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR-3UTR CAA 90 bp | TGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGACTTAGCGAAGAAAAACAATCCATTGCCCATCTaGTACTCAGGACCCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: WYVDYYSASNFADLAKKNNPLPI*YSGPPL Trigger: AAGAGGGGGTCCTGAGTACAAGATGGGCAATGGATT...GTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | TTTCTGGTATGTGGATTATTATTCTGCCTCAAATTTTaGGGACTTAGCGAAGAAAAACACCTAGACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: FLVCGLLFCLKF*GLSEEKHLDSQ Trigger: CTGGGAGTCTAGGTGTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR GCA 72 bp | AGCCTCTCAAAGTTTCTGGTATGTGGATTATTATTCTaGCTCAAATTTTGCGGACTTAGCGAAGAAAAACAC | + |
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Preference number: 3 (lower is better) Translates to: SLSKFLVCGLLF*LKFCGLSEEKH Trigger: GTGTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAACTTTGAGAGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 72 bp | ATGCACGAGGGCCGCTGCCAGCACCACTGCGGTTGTTaGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: MHEGRCQHHCGC*PGCSLLVSPSC Trigger: GCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTGCTGGCAGCGGCCCTCGTGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 72 bp | CTGCATGCACGAGGGCCGCTGCCAGCACCACTGCGGTaGTTTGCCGGGATGCTCTTTGCTGGTGTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LHARGPLPAPLR*FAGMLFAGVSI Trigger: GATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGGTGCTGGCAGCGGCCCTCGTGCATGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | CAGAGAGCCCTTGGAACCCTGAGAGTTAGCCCTGCATGCACGAGGGCCGCTGCCTTCAGCATGCGCTGGTaGGTGAAGGACTTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRALGTLRVSPACTRAAAFSMRW*VKDFWQ Trigger: CTGCCAGAAGTCCTTCACCCACCAGCGCATGCTGAA...GGCAGCGGCCCTCGTGCATGCAGGGCTAACTCTCAGGGTTCCAAGGGCTCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTCCGGTAGGGCTGTGGTaGGCAGAAGCCGAGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGCSLLVSPSCSPGESIPVGLW*AEAEAD Trigger: GTCAGCCTCGGCTTCTGCCCACCACAGCCCTACCGG...AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 72 bp | GACTTGGTGTCGAATCGCCATCGCCATCCCATTTGCTaGAGGAGCATCAGTAGGACCCACCGTCAGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLVSNRHRHPIC*RSISRTHRQPP Trigger: CGGAGGCTGACGGTGGGTCCTACTGATGCTCCTCAAGCAAATGGGATGGCGATGGCGATTCGACACCAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | GTCACTGGTGTTCTAGCAAGAGGTTGCAGGAAGGTGAATGGCTGGGCAGCAGGGCCGGCGCTCCTTGTATaGATACTTCTGCTGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVLARGCRKVNGWAAGPALLV*ILLLHS Trigger: GGAGTGCAGCAGAAGTATGCATACAAGGAGCGCCGG...CCCTGCTGCCCAGCCATTCACCTTCCTGCAACCTCTTGCTAGAACACCAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | CCACTGCGGTTGTTTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCGACGTGACAGTGTTCTaGAGAGCCACAGCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRLFAGMLFAGVSILLSDVTVF*RATATF Trigger: GAAAGTGGCTGTGGCTCTGCAGAACACTGTCACGTC...GGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | CCACTGCGGTTGTTTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCGAGCCACGCTATAGCTaGAGTCTCGAAGGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRLFAGMLFAGVSILLSEPRYS*SLEGSC Trigger: ACATGAGCCTTCGAGACTCCAGCTATAGCGTGGCTC...GGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTCCCTGGTCTCTGCTCTaGGGATCTGTCAGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSLLVSPSCSPGESIPWSLL*GSVRWL Trigger: GAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGG...AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCAGGGGAATCCATTCGATTCAGCATGCGCTaGTGGGTGAAGGACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSLLVSPSCSPGESIRFSMR*WVKDFW Trigger: CCAGAAGTCCTTCACCCACCAGCGCATGCTGAATCG...AATGGATTCCCCTGGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | AGGTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTGCAAAACCACCCCAGGGTCTTGCGCAGCAGTaGGCTGTCGGGGTGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLMKHLREQGGSAKPPQGLAQQ*AVGVAF Trigger: GAACGCCACCCCGACAGCCCACTGCTGCGCAAGACC...CTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | AGGTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTGCAAAACCACCCCAGTTCCCGGTAGGGCTGTaGTGGGCAGAAGCCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLMKHLREQGGSAKPPQFPVGL*WAEAEA Trigger: AGCCTCGGCTTCTGCCCACCACAGCCCTACCGGGAA...CTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR TCA 90 bp | GTCACTGGTGTTCTAGCAAGAGGTTGCAGGAAGGTGAATGGCTGGGCAGCAGGGCTCTTGACGTCGTTGTaGCACTTCATGTGTCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVLARGCRKVNGWAAGLLTSL*HFMCRF Trigger: GAATCGACACATGAAGTGTCACAACGACGTCAAGAG...CCCTGCTGCCCAGCCATTCACCTTCCTGCAACCTCTTGCTAGAACACCAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR TCA 90 bp | TTTTTGGTCTCAGCAGGATACCCAGACACACCAGTGGACAAAGACTCCCTCCCTGAGAGCAGCGCTGAGTaGAGGCCTTATCACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLVSAGYPDTPVDKDSLPESSAE*RPYHTD Trigger: GTCTGTGTGATAAGGCCTTCACTCAGCGCTGCTCTC...AGGGAGGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | GACTTGGTGTCGAATCGCCATCGCCATCCCATTTGCTTGAGGAGCATCAGTAGGCCTTATCACACAGACTaGACTTGTAGGGCCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLVSNRHRHPICLRSISRPYHTD*TCRAAH Trigger: GTGTGCGGCCCTACAAGTGCAGTCTGTGTGATAAGG...CCTACTGATGCTCCTCAAGCAAATGGGATGGCGATGGCGATTCGACACCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS-3UTR GCA 90 bp | CCACTGCGGTTGTTTGCCGGGATGCTCTTTGCTGGTGTCTCCATCCTGCTCTCCTATGCATACTTCTGCTaGACTCCGTGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRLFAGMLFAGVSILLSYAYFC*TPWIFL Trigger: CAAGAAGATCCACGGAGTGCAGCAGAAGTATGCATA...GGAGAGCAGGATGGAGACACCAGCAAAGAGCATCCCGGCAAACAACCGCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | AGACACACCAGTGGACAAAGACTCCCTCCCTCAGAGGAGCTACTCGGTTCAAAGTTCTGCTGCACTCCGTaGATCTTCTTGAGGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTSGQRLPPSEELLGSKFCCTP*IFLRWD Trigger: GTCCCACCTCAAGAAGATCCACGGAGTGCAGCAGAA...CTTTGAACCGAGTAGCTCCTCTGAGGGAGGGAGTCTTTGTCCACTGGTGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | CACACAGAGCAGTGTGACATACACGCGGCTGTTCACATGTGGGTCTCTGATGAACCACAGCCACTTTCTTaGAGGTCTTGCGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTEQCDIHAAVHMWVSDEPQPLS*RSCAAV Trigger: CACTGCTGCGCAAGACCTCCAAGAAAGTGGCTGTGG...TTCATCAGAGACCCACATGTGAACAGCCGCGTGTATGTCACACTGCTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | GAGGCAATAAGTGGAAAGACCAAGAGCGCACATGCACACGTGAAGAAATCACACGCACGTGGAGACGCATaGCTTCTTCACCAGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: EAISGKTKSAHAHVKKSHARGDA*LLHQER Trigger: GCGTTCCTGGTGAAGAAGCCATGCGTCTCCACGTGC...GTGTGATTTCTTCACGTGTGCATGTGCGCTCTTGGTCTTTCCACTTATTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TTTTTGGTCTCAGCAGGATACCCAGACACACCAGTGGACAAAGACTCCCTCCCTGTTCGTAGAAAGCCCTaGTCTCTGCTCTGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVSAGYPDTPVDKDSLPVRRKP*SLLWGS Trigger: AGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAAC...AGGGAGGGAGTCTTTGTCCACTGGTGTGTCTGGGTATCCTGCTGAGACCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | GACTTGGTGTCGAATCGCCATCGCCATCCCATTTGCTTGAGGAGCATCAGTAGGAAAAAGGTCTCCATTTaGACTGTCCCCCAAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLVSNRHRHPICLRSISRKKVSI*TVPQGH Trigger: GTGACCTTGGGGGACAGTCCAAATGGAGACCTTTTT...CCTACTGATGCTCCTCAAGCAAATGGGATGGCGATGGCGATTCGACACCAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 72 bp | CAAGGAAACAGGGCCTGTCTCTGTAAGTGGTTCTTCTaGCTCACTTGTCCTCACTCCTGCTGGGACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGNRACLCKWFF*LTCPHSCWDTN Trigger: GTTTGTGTCCCAGCAGGAGTGAGGACAAGTGAGCAAGAAGAACCACTTACAGAGACAGGCCCTGTTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR TCA 90 bp | AGGTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTGCAAAACCACCCCAGTGCAGAGGTGCCTCTTaGCGTCGTTGTGACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSLMKHLREQGGSAKPPQCRGAS*RRCDTS Trigger: TGAAGTGTCACAACGACGTCAAGAGGCACCTCTGCA...CTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | AGGTCTTTAATGAAACATCTCAGAGAACAGGGTGGGTCTGCAAAACCACCCCAGCTTGACTCTCGGATGTaGAACCGCACTCCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RSLMKHLREQGGSAKPPQLDSRM*NRTPHT Trigger: TGTGTGAGGAGTGCGGTTGCACATCCGAGAGTCAAG...CTGGGGTGGTTTTGCAGACCCACCCTGTTCTCTGAGATGTTTCATTAAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | CACACAGAGCAGTGTGACATACACGCGGCTGTTCACATGTGGGTCTCTGATGAATGGGTGAAGGACTTCTaGCAGATGTGGCAGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTEQCDIHAAVHMWVSDEWVKDF*QMWQVK Trigger: TTTTACCTGCCACATCTGCCAGAAGTCCTTCACCCA...TTCATCAGAGACCCACATGTGAACAGCCGCGTGTATGTCACACTGCTCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | AGAAATACAGAAAGTATTAGTTCTCTCACTTTACTAGTTGGACGGGTGCTTACAAGATGGGGGCTGCCCTaGAGCAGGGACGTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNTESISSLTLLVGRVLTRWGLP*SRDVTV Trigger: CACTGTCACGTCCCTGCTGCAGGGCAGCCCCCATCT...TGTAAGCACCCGTCCAACTAGTAAAGTGAGAGAACTAATACTTTCTGTATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGACTTAGCGAAGAAAAACGAAGCCGAGGCTGACTaGCACGTAGATCTCGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: WYVDYYSASNFADLAKKNEAEAD*HVDLAA Trigger: CGCGGCGAGATCTACGTGCCAGTCAGCCTCGGCTTC...GTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGCTACTCGGTTCAAAGGCATTTGGAAAACAGAAGTAAGACAACAGAGAGTTCCTCTTGCACGTaGAGACGCATGGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSYSVQRHLENRSKTTESSSCT*RRMASS Trigger: TGAAGAAGCCATGCGTCTCCACGTGCAAGAGGAACT...CTCTGTTGTCTTACTTCTGTTTTCCAAATGCCTTTGAACCGAGTAGCTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | ATTAGCCTCTCAAAGTTTCTGGTATGTGGATTATTATTCTGCCTCAAATTTTGCTCTTCAGAGGGTAGCTaGGCCACCACGCAGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLSKFLVCGLLFCLKFCSSEGS*ATTQGP Trigger: AGGGCCCTGCGTGGTGGCCCAGCTACCCTCTGAAGA...GCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAACTTTGAGAGGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR TCA 90 bp | TGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGACTTAGCGAAGAAAAACGCATGCGCTGGTGGGTaGAGGACTTCTGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: WYVDYYSASNFADLAKKNACAGG*RTSGRC Trigger: ACATCTGCCAGAAGTCCTTCACCCACCAGCGCATGC...GTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR GCA 90 bp | TGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGACTTAGCGAAGAAAAACCGCTCCAGTTCCTCTTaGACGTGGAGACGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYVDYYSASNFADLAKKNRSSSS*TWRRMA Trigger: AGCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCG...GTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| 3UTR CAA 72 bp | CAAGACAGACAACATAAAGCTTATGATGGCCCCAGATaGGCAACGAGCTTACAGACACAAAGATGCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QDRQHKAYDGPR*ATSLQTQRCQH Trigger: GTGTTGGCATCTTTGTGTCTGTAAGCTCGTTGCCAATCTGGGGCCATCATAAGCTTTATGTTGTCTGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | ATTAGCCTCTCAAAGTTTCTGGTATGTGGATTATTATTCTGCCTCAAATTTTGCCACACACGTAGAGCTTaGCCCGGCGCTCCTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ISLSKFLVCGLLFCLKFCHTRRA*PGAPCM Trigger: CATACAAGGAGCGCCGGGCCAAGCTCTACGTGTGTG...GCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAACTTTGAGAGGCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR TCA 90 bp | ATTAGCCTCTCAAAGTTTCTGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGTCAAAGGTGTCATTaGAGCCCTTCCCACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLSKFLVCGLLFCLKFCGQRCH*SPSHSK Trigger: CTTACTGTGGGAAGGGCTTCAATGACACCTTTGACC...GCAAAATTTGAGGCAGAATAATAATCCACATACCAGAAACTTTGAGAGGCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CCA 90 bp | TGGTATGTGGATTATTATTCTGCCTCAAATTTTGCGGACTTAGCGAAGAAAAACGACTTCTGGCAGATGTaGCAGGTAAAAAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WYVDYYSASNFADLAKKNDFWQM*QVKRSP Trigger: TGGAGACCTTTTTACCTGCCACATCTGCCAGAAGTC...GTTTTTCTTCGCTAAGTCCGCAAAATTTGAGGCAGAATAATAATCCACATACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 90 bp | GGAAGGAGGCTCGGCCACCGATGCCTCTGGTTCCCGGTAGGGCTGTaGTGGGCAGAAGCCGAGGCTGACTGGCACGTAGATCTCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRRLGHRCLWFPVGL*WAEAEADWHVDLAA Trigger: CGCGGCGAGATCTACGTGCCAGTCAGCCTCGGCTTCTGCCCACCACAGCCCTACCGGGAACCAGAGGCATCGGTGGCCGAGCCTCCTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 90 bp | GCTCATGTCCAAAGCCAGGGGGCAGGAAGGAGGCTCGGCCACCGATaGCTCTGGTTCCCGGTAGGGCTGTGGTGGGCAGAAGCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHVQSQGAGRRLGHR*LWFPVGLWWAEAEA Trigger: AGCCTCGGCTTCTGCCCACCACAGCCCTACCGGGAACCAGAGGCATCGGTGGCCGAGCCTCCTTCCTGCCCCCTGGCTTTGGACATGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 90 bp | AGGGTAGCTGGGCCACCACGCAGGGCCCTGGAGCCACGCTATAGCTaGAGTCTCGAAGGCTCATGTCCAAAGCCAGGGGGCAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVAGPPRRALEPRYS*SLEGSCPKPGGRKE Trigger: CTCCTTCCTGCCCCCTGGCTTTGGACATGAGCCTTCGAGACTCCAGCTATAGCGTGGCTCCAGGGCCCTGCGTGGTGGCCCAGCTACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 90 bp | AGATCTCGCCGCGCTCTTCGTCCGGGAGCTCGCTCCAGTTCCTCTTaGACGTGGAGACGCATGGCTTCTTCACCAGGAACGCGCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSRRALRPGARSSSS*TWRRMASSPGTREA Trigger: TGCCTCGCGCGTTCCTGGTGAAGAAGCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCGAGCTCCCGGACGAAGAGCGCGGCGAGATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS TCA 90 bp | TCTTGGAGGTCTTGCGCAGCAGTGGGCTGTCGGGGTGGCGTTCCTTaGGGTGCAGGACATGACCCTCTTGACTCTCGGATGTGCAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: SWRSCAAVGCRGGVP*GAGHDPLDSRMCNR Trigger: GCGGTTGCACATCCGAGAGTCAAGAGGGTCATGTCCTGCACCTCAAGGAACGCCACCCCGACAGCCCACTGCTGCGCAAGACCTCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 90 bp | GTTCTGCAGAGCCACAGCCACTTTCTTGGAGGTCTTGCGCAGCAGTaGGCTGTCGGGGTGGCGTTCCTTGAGGTGCAGGACATGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLQSHSHFLGGLAQQ*AVGVAFLEVQDMTL Trigger: GAGGGTCATGTCCTGCACCTCAAGGAACGCCACCCCGACAGCCCACTGCTGCGCAAGACCTCCAAGAAAGTGGCTGTGGCTCTGCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 90 bp | TTGGTTCGTAGAAAGCCCTGGTCTCTGCTCTGGGGATCTGTCAGATaGCTCACATCTTCAGAGGGTAGCTGGGCCACCACGCAGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVRRKPWSLLWGSVR*LTSSEGSWATTQGP Trigger: AGGGCCCTGCGTGGTGGCCCAGCTACCCTCTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025861.3 ENSMUST00000238060.2 |
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| CDS-3UTR CAA 90 bp | GTCACTGGTGTTCTAGCAAGAGGTTGCAGGAAGGTGAATGGCTGGGCAGCAGGGTCGCTCCAGTTCCTCTaGCACGTGGAGACGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTGVLARGCRKVNGWAAGSLQFL*HVETHG Trigger: GCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCGA...CCCTGCTGCCCAGCCATTCACCTTCCTGCAACCTCTTGCTAGAACACCAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CAA 90 bp | AGCAAGAGGTTGCAGGAAGGTGAATGGCTGGGCAGCAGGGAAGTGAACCTGGTCGCCACAGCCACTTTCTaGGAGGTCTTGCGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKRLQEGEWLGSREVNLVATATF*EVLRSS Trigger: ACTGCTGCGCAAGACCTCCAAGAAAGTGGCTGTGGC...GACCAGGTTCACTTCCCTGCTGCCCAGCCATTCACCTTCCTGCAACCTCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS GCA 90 bp | CCCCCAAGGTCACCTTCATCTTGGTTCGTAGAAAGCCCTGGTCTCTaGTCTGGGGATCTGTCAGATGGCTCACATCTTCAGAGGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPRSPSSWFVESPGL*SGDLSDGSHLQRVA Trigger: AGCTACCCTCTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAAGGTGACCTTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS CCA 90 bp | AAGGTCACCTTCATCTTGGTTCGTAGAAAGCCCTGGTCTCTGCTCTaGGGATCTGTCAGATGGCTCACATCTTCAGAGGGTAGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVTFILVRRKPWSLL*GSVRWLTSSEGSWA Trigger: GGCCCAGCTACCCTCTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAAGGTGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS CCA 90 bp | GGACTGTCCCCCAAGGTCACCTTCATCTTGGTTCGTAGAAAGCCCTaGTCTCTGCTCTGGGGATCTGTCAGATGGCTCACATCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSPKVTFILVRRKP*SLLWGSVRWLTSSE Trigger: CTCTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAAGGTGACCTTGGGGGACAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS CCA 90 bp | TGTCGATTCAGCATGCGCTGGTGGGTGAAGGACTTCTGGCAGATGTaGCAGGTAAAAAGGTCTCCATTTGGACTGTCCCCCAAGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CRFSMRWWVKDFWQM*QVKRSPFGLSPKVT Trigger: GGTGACCTTGGGGGACAGTCCAAATGGAGACCTTTTTACCTGCCACATCTGCCAGAAGTCCTTCACCCACCAGCGCATGCTGAATCGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
||
| CDS CCA 90 bp | CACTTCATGTGTCGATTCAGCATGCGCTGGTGGGTGAAGGACTTCTaGCAGATGTGGCAGGTAAAAAGGTCTCCATTTGGACTGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HFMCRFSMRWWVKDF*QMWQVKRSPFGLSP Trigger: GGGGGACAGTCCAAATGGAGACCTTTTTACCTGCCACATCTGCCAGAAGTCCTTCACCCACCAGCGCATGCTGAATCGACACATGAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CAA 90 bp | GTCACTGGTGTTCTAGCAAGAGGTTGCAGGAAGGTGAATGGCTGGGCAGCAGGGGTTCGGACATGTCTCTaGAGGTCAAAGGTGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: VTGVLARGCRKVNGWAAGVRTCL*RSKVSL Trigger: CAATGACACCTTTGACCTCAAGAGACATGTCCGAAC...CCCTGCTGCCCAGCCATTCACCTTCCTGCAACCTCTTGCTAGAACACCAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS-3UTR CAA 90 bp | AGAAATACAGAAAGTATTAGTTCTCTCACTTTACTAGTTGGACGGGTGCTTACATTGGCCCGGCGCTCCTaGTATGCATACTTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RNTESISSLTLLVGRVLTLARRS*YAYFCC Trigger: GCAGCAGAAGTATGCATACAAGGAGCGCCGGGCCAA...TGTAAGCACCCGTCCAACTAGTAAAGTGAGAGAACTAATACTTTCTGTATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 72 bp | CAAAGCCAGGGGGCAGGAAGGAGGCTCGGCCACCGATaGCTCTGGTTCCCGGTAGGGCTGTGGTGGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QSQGAGRRLGHR*LWFPVGLWWAE Trigger: TTCTGCCCACCACAGCCCTACCGGGAACCAGAGGCATCGGTGGCCGAGCCTCCTTCCTGCCCCCTGGCTTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | GGCCACCGATGCCTCTGGTTCCCGGTAGGGCTGTGGTaGGCAGAAGCCGAGGCTGACTGGCACGTAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: GHRCLWFPVGLW*AEAEADWHVDL Trigger: GAGATCTACGTGCCAGTCAGCCTCGGCTTCTGCCCACCACAGCCCTACCGGGAACCAGAGGCATCGGTGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | CTCGGCCACCGATGCCTCTGGTTCCCGGTAGGGCTGTaGTGGGCAGAAGCCGAGGCTGACTGGCACGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LGHRCLWFPVGL*WAEAEADWHVD Trigger: ATCTACGTGCCAGTCAGCCTCGGCTTCTGCCCACCACAGCCCTACCGGGAACCAGAGGCATCGGTGGCCGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 72 bp | CGCGCTCTTCGTCCGGGAGCTCGCTCCAGTTCCTCTTaGACGTGGAGACGCATGGCTTCTTCACCAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: RALRPGARSSSS*TWRRMASSPGT Trigger: CGTTCCTGGTGAAGAAGCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCGAGCTCCCGGACGAAGAGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 72 bp | TGGGGGCTGCCCTGCAGCAGGGACGTGACAGTGTTCTaGAGAGCCACAGCCACTTTCTTGGAGGTCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: WGLPCSRDVTVF*RATATFLEVLR Trigger: GCGCAAGACCTCCAAGAAAGTGGCTGTGGCTCTGCAGAACACTGTCACGTCCCTGCTGCAGGGCAGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | CTTCGTCCGGGAGCTCGCTCCAGTTCCTCTTGCACGTaGAGACGCATGGCTTCTTCACCAGGAACGCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LRPGARSSSSCT*RRMASSPGTRE Trigger: CTCGCGCGTTCCTGGTGAAGAAGCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCGAGCTCCCGGACGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | AGCCACAGCCACTTTCTTGGAGGTCTTGCGCAGCAGTaGGCTGTCGGGGTGGCGTTCCTTGAGGTGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SHSHFLGGLAQQ*AVGVAFLEVQD Trigger: GTCCTGCACCTCAAGGAACGCCACCCCGACAGCCCACTGCTGCGCAAGACCTCCAAGAAAGTGGCTGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CAA 72 bp | CCGCGCTCTTCGTCCGGGAGCTCGCTCCAGTTCCTCTaGCACGTGGAGACGCATGGCTTCTTCACCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PRSSSGSSLQFL*HVETHGFFTRN Trigger: GTTCCTGGTGAAGAAGCCATGCGTCTCCACGTGCAAGAGGAACTGGAGCGAGCTCCCGGACGAAGAGCGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CAA 90 bp | TGCAGCAGGGACGTGACAGTGTTCTGCAGAGCCACAGCCACTTTCTaGGAGGTCTTGCGCAGCAGTGGGCTGTCGGGGTGGCGTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSRDVTVFCRATATF*EVLRSSGLSGWRSL Trigger: CAAGGAACGCCACCCCGACAGCCCACTGCTGCGCAAGACCTCCAAGAAAGTGGCTGTGGCTCTGCAGAACACTGTCACGTCCCTGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS TCA 72 bp | TCTTGCGCAGCAGTGGGCTGTCGGGGTGGCGTTCCTTaGGGTGCAGGACATGACCCTCTTGACTCTCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SCAAVGCRGGVP*GAGHDPLDSRM Trigger: CATCCGAGAGTCAAGAGGGTCATGTCCTGCACCTCAAGGAACGCCACCCCGACAGCCCACTGCTGCGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CAA 72 bp | GGGGTGGCGTTCCTTGAGGTGCAGGACATGACCCTCTaGACTCTCGGATGTGCAACCGCACTCCTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: GVAFLEVQDMTL*TLGCATALLTH Trigger: GTGTGTGAGGAGTGCGGTTGCACATCCGAGAGTCAAGAGGGTCATGTCCTGCACCTCAAGGAACGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CAA 90 bp | TGGGCTGTCGGGGTGGCGTTCCTTGAGGTGCAGGACATGACCCTCTaGACTCTCGGATGTGCAACCGCACTCCTCACACACGTAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: WAVGVAFLEVQDMTL*TLGCATALLTHVEL Trigger: AAGCTCTACGTGTGTGAGGAGTGCGGTTGCACATCCGAGAGTCAAGAGGGTCATGTCCTGCACCTCAAGGAACGCCACCCCGACAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | AGCATGCGCTGGTGGGTGAAGGACTTCTGGCAGATGTaGCAGGTAAAAAGGTCTCCATTTGGACTGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: SMRWWVKDFWQM*QVKRSPFGLSP Trigger: GGGGGACAGTCCAAATGGAGACCTTTTTACCTGCCACATCTGCCAGAAGTCCTTCACCCACCAGCGCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | CCCAAGGTCACCTTCATCTTGGTTCGTAGAAAGCCCTaGTCTCTGCTCTGGGGATCTGTCAGATGGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: PKVTFILVRRKP*SLLWGSVRWLT Trigger: TGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAAGGTGACCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS GCA 72 bp | TCACCTTCATCTTGGTTCGTAGAAAGCCCTGGTCTCTaGTCTGGGGATCTGTCAGATGGCTCACATCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SPSSWFVESPGL*SGDLSDGSHLQ Trigger: CTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | TTCATCTTGGTTCGTAGAAAGCCCTGGTCTCTGCTCTaGGGATCTGTCAGATGGCTCACATCTTCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: FILVRRKPWSLL*GSVRWLTSSEG Trigger: ACCCTCTGAAGATGTGAGCCATCTGACAGATCCCCAGAGCAGAGACCAGGGCTTTCTACGAACCAAGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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| CDS CCA 72 bp | CTTCTGGCAGATGTGGCAGGTAAAAAGGTCTCCATTTaGACTGTCCCCCAAGGTCACCTTCATCTTGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: LLADVAGKKVSI*TVPQGHLHLGS Trigger: CGAACCAAGATGAAGGTGACCTTGGGGGACAGTCCAAATGGAGACCTTTTTACCTGCCACATCTGCCAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025861.3 |
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